Spg035839 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg035839
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	agamous-like MADS-box protein AGL29
Location	scaffold5: 40125863 .. 40126366 (+)
RNA-Seq Expression	Spg035839
Synteny	Spg035839

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAAAGATAGAGGCTCCAGACAAGTTACCTTTTCGAAGCGCCGAAACGGTCTCTTCAAGAAAGCGAACGATCTCGCTACTCTGTGCGGTTTACAGATCGCCATTGTCGTCTTCTCTCCCGGCGGCAAGGCGTTCTCGTTCGGCAATCCGAACGTCGAGGACGTCGTCGATCGATACCTAAATCGCGAATCGGAGCCGATTCCGCCGGCGAGGGAGAGCGGAATGTTCGAGAAGGAGAATGAGGAACTTGTCGATCTGATCAAGCAATTGCAACTGGAGAAGAAGAAGGGAGAAATGCTGGACAAGGAGATGAAATCGAGAGGAGAATCGAGCAAAATCGAGGAACTCGATCTGGATGCGCTTTTGAAATTGAAGGAATCGTTGGAAAATTTGCGAGCGAATGTGAAAATTAAAGAGAGTGAATTGGAGGCGTCGTCTTCGTTGCTGCTGCTTGCAAATGAACCAGTCGTGGAGGCCGATGAGTCTGATACAAAAAACTGA

mRNA sequence

ATGGTGAAAGATAGAGGCTCCAGACAAGTTACCTTTTCGAAGCGCCGAAACGGTCTCTTCAAGAAAGCGAACGATCTCGCTACTCTGTGCGGTTTACAGATCGCCATTGTCGTCTTCTCTCCCGGCGGCAAGGCGTTCTCGTTCGGCAATCCGAACGTCGAGGACGTCGTCGATCGATACCTAAATCGCGAATCGGAGCCGATTCCGCCGGCGAGGGAGAGCGGAATGTTCGAGAAGGAGAATGAGGAACTTGTCGATCTGATCAAGCAATTGCAACTGGAGAAGAAGAAGGGAGAAATGCTGGACAAGGAGATGAAATCGAGAGGAGAATCGAGCAAAATCGAGGAACTCGATCTGGATGCGCTTTTGAAATTGAAGGAATCGTTGGAAAATTTGCGAGCGAATGTGAAAATTAAAGAGAGTGAATTGGAGGCGTCGTCTTCGTTGCTGCTGCTTGCAAATGAACCAGTCGTGGAGGCCGATGAGTCTGATACAAAAAACTGA

Coding sequence (CDS)

ATGGTGAAAGATAGAGGCTCCAGACAAGTTACCTTTTCGAAGCGCCGAAACGGTCTCTTCAAGAAAGCGAACGATCTCGCTACTCTGTGCGGTTTACAGATCGCCATTGTCGTCTTCTCTCCCGGCGGCAAGGCGTTCTCGTTCGGCAATCCGAACGTCGAGGACGTCGTCGATCGATACCTAAATCGCGAATCGGAGCCGATTCCGCCGGCGAGGGAGAGCGGAATGTTCGAGAAGGAGAATGAGGAACTTGTCGATCTGATCAAGCAATTGCAACTGGAGAAGAAGAAGGGAGAAATGCTGGACAAGGAGATGAAATCGAGAGGAGAATCGAGCAAAATCGAGGAACTCGATCTGGATGCGCTTTTGAAATTGAAGGAATCGTTGGAAAATTTGCGAGCGAATGTGAAAATTAAAGAGAGTGAATTGGAGGCGTCGTCTTCGTTGCTGCTGCTTGCAAATGAACCAGTCGTGGAGGCCGATGAGTCTGATACAAAAAACTGA

Protein sequence

MVKDRGSRQVTFSKRRNGLFKKANDLATLCGLQIAIVVFSPGGKAFSFGNPNVEDVVDRYLNRESEPIPPARESGMFEKENEELVDLIKQLQLEKKKGEMLDKEMKSRGESSKIEELDLDALLKLKESLENLRANVKIKESELEASSSLLLLANEPVVEADESDTKN

Homology

[Close]

BLAST of Spg035839 vs. NCBI nr
Match: XP_023519112.1 (agamous-like MADS-box protein AGL29 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 276.2 bits (705), Expect = 1.9e-70
Identity = 148/166 (89.16%), Postives = 159/166 (95.78%), Query Frame = 0


Query: 1   MVKDRGSRQVTFSKRRNGLFKKANDLATLCGLQIAIVVFSPGGKAFSFGNPNVEDVVDRY 60
           MVKDRGSRQVTFSKRRNGLFKKANDLATLCGL+IAI+VFSPGGKAFSFGNPNVEDVVDRY
Sbjct: 10  MVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIIVFSPGGKAFSFGNPNVEDVVDRY 69

Query: 61  LNRESEPIPPARESGMFEKENEELVDLIKQLQLEKKKGEMLDKEMKSRGESSKIEELDLD 120
           LNR+SEPIPPA E GMFEKENEEL+DL+KQLQLEKKKGEML+KEMKSRGES KIE+LDLD
Sbjct: 70  LNRKSEPIPPASE-GMFEKENEELIDLVKQLQLEKKKGEMLEKEMKSRGESIKIEDLDLD 129

Query: 121 ALLKLKESLENLRANVKIKESELEASSSLLLLANEPVVEADESDTK 167
            LLKLKESLE+LR NV++KESELEASSSLLLLANEPVVEAD S +K
Sbjct: 130 ELLKLKESLESLRQNVRMKESELEASSSLLLLANEPVVEADASASK 174

[Close]

BLAST of Spg035839 vs. NCBI nr
Match: KAG6583909.1 (Agamous-like MADS-box protein AGL29, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 275.8 bits (704), Expect = 2.5e-70
Identity = 148/166 (89.16%), Postives = 158/166 (95.18%), Query Frame = 0


Query: 1   MVKDRGSRQVTFSKRRNGLFKKANDLATLCGLQIAIVVFSPGGKAFSFGNPNVEDVVDRY 60
           MVKDRGSRQVTFSKRRNGLFKKANDLATLCGL+IAI+VFSPGGKAFSFGNPNVEDVVDRY
Sbjct: 10  MVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIIVFSPGGKAFSFGNPNVEDVVDRY 69

Query: 61  LNRESEPIPPARESGMFEKENEELVDLIKQLQLEKKKGEMLDKEMKSRGESSKIEELDLD 120
           LNR+SEPIPPA E GMFEKENEEL+DL+KQLQLEKKKGEML+KEMKSRGES KIE+LDLD
Sbjct: 70  LNRKSEPIPPASE-GMFEKENEELIDLVKQLQLEKKKGEMLEKEMKSRGESIKIEDLDLD 129

Query: 121 ALLKLKESLENLRANVKIKESELEASSSLLLLANEPVVEADESDTK 167
            LLKLKESLE LR NV++KESELEASSSLLLLANEPVVEAD S +K
Sbjct: 130 ELLKLKESLERLRQNVRMKESELEASSSLLLLANEPVVEADASASK 174

[Close]

BLAST of Spg035839 vs. NCBI nr
Match: XP_022927257.1 (agamous-like MADS-box protein AGL29 [Cucurbita moschata])

HSP 1 Score: 275.0 bits (702), Expect = 4.2e-70
Identity = 148/166 (89.16%), Postives = 157/166 (94.58%), Query Frame = 0


Query: 1   MVKDRGSRQVTFSKRRNGLFKKANDLATLCGLQIAIVVFSPGGKAFSFGNPNVEDVVDRY 60
           MVKDRGSRQVTFSKRRNGLFKKANDLATLCGL+IAI+VFSPGGKAFSFGNPNVEDVVDRY
Sbjct: 10  MVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIIVFSPGGKAFSFGNPNVEDVVDRY 69

Query: 61  LNRESEPIPPARESGMFEKENEELVDLIKQLQLEKKKGEMLDKEMKSRGESSKIEELDLD 120
           LNR+SEPIPPA E GMFEKENEEL+DL+KQLQLEKKKGEML+KEMKSRGES KIE+LDLD
Sbjct: 70  LNRKSEPIPPASE-GMFEKENEELIDLVKQLQLEKKKGEMLEKEMKSRGESIKIEDLDLD 129

Query: 121 ALLKLKESLENLRANVKIKESELEASSSLLLLANEPVVEADESDTK 167
            LLKLKESLE LR NV +KESELEASSSLLLLANEPVVEAD S +K
Sbjct: 130 ELLKLKESLERLRQNVSMKESELEASSSLLLLANEPVVEADASASK 174

[Close]

BLAST of Spg035839 vs. NCBI nr
Match: XP_023001476.1 (agamous-like MADS-box protein AGL29 [Cucurbita maxima])

HSP 1 Score: 274.2 bits (700), Expect = 7.2e-70
Identity = 147/166 (88.55%), Postives = 158/166 (95.18%), Query Frame = 0


Query: 1   MVKDRGSRQVTFSKRRNGLFKKANDLATLCGLQIAIVVFSPGGKAFSFGNPNVEDVVDRY 60
           MVKDRGSRQVTFSKRRNGLFKKANDLATLCGL+IAI+VFSPGGKAFSFGNPNVE+VVDRY
Sbjct: 10  MVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIIVFSPGGKAFSFGNPNVEEVVDRY 69

Query: 61  LNRESEPIPPARESGMFEKENEELVDLIKQLQLEKKKGEMLDKEMKSRGESSKIEELDLD 120
           LNR+SEPIPPA E GMFEKENEEL+DL+KQLQLEKKKGEML+KEMKSRGES KIE+LDLD
Sbjct: 70  LNRKSEPIPPASE-GMFEKENEELIDLVKQLQLEKKKGEMLEKEMKSRGESIKIEDLDLD 129

Query: 121 ALLKLKESLENLRANVKIKESELEASSSLLLLANEPVVEADESDTK 167
            LLKLKESLE LR NV++KESELEASSSLLLLANEPVVEAD S +K
Sbjct: 130 ELLKLKESLERLRKNVRMKESELEASSSLLLLANEPVVEADASASK 174

[Close]

BLAST of Spg035839 vs. NCBI nr
Match: KAG7019526.1 (Agamous-like MADS-box protein AGL29, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 271.6 bits (693), Expect = 4.7e-69
Identity = 145/166 (87.35%), Postives = 158/166 (95.18%), Query Frame = 0


Query: 1   MVKDRGSRQVTFSKRRNGLFKKANDLATLCGLQIAIVVFSPGGKAFSFGNPNVEDVVDRY 60
           MVKDRGSRQVTFSKRRNGLFKKANDLATLCGL+IAI+VFSPGGKAFSFGNPNVEDVVDRY
Sbjct: 10  MVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIIVFSPGGKAFSFGNPNVEDVVDRY 69

Query: 61  LNRESEPIPPARESGMFEKENEELVDLIKQLQLEKKKGEMLDKEMKSRGESSKIEELDLD 120
           LNR+SEPIPPA E GMFEKENEEL+DL+KQLQLEKKKGEML+KEMKSRGES KIE+LDL+
Sbjct: 70  LNRKSEPIPPASE-GMFEKENEELIDLVKQLQLEKKKGEMLEKEMKSRGESIKIEDLDLN 129

Query: 121 ALLKLKESLENLRANVKIKESELEASSSLLLLANEPVVEADESDTK 167
            LLKL+ESLE LR NV++KESELEASSSLLLLANEPV+EAD S +K
Sbjct: 130 ELLKLRESLERLRKNVRMKESELEASSSLLLLANEPVMEADASASK 174

[Close]

BLAST of Spg035839 vs. ExPASy Swiss-Prot
Match: Q9FKK2 (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.1e-23
Identity = 69/155 (44.52%), Postives = 98/155 (63.23%), Query Frame = 0


Query: 2   VKDRGSRQVTFSKRRNGLFKKANDLATLCGLQIAIVVFSPGGKAFSFGNPNVEDVVDRYL 61
           +K+  + QVTFSKRR+GLFKKA++L TLCG ++AIVVFSPG K FSFG+PNV+ V+DR++
Sbjct: 16  MKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSFGHPNVDSVIDRFI 75

Query: 62  NRESEPIPPARESGMFEKE----------NEELVDLIKQLQLEKKKGEMLDK---EMKSR 121
           N  + P+PP + + M  +E          N  L  ++ QL+ EKKK + L K   + K+ 
Sbjct: 76  N--NNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYDELKKIREKTKAL 135

Query: 122 GE--SSKIEELDLDALLKLKESLENLRANVKIKES 142
           G      +EEL L  L   K +LENL+  V ++ S
Sbjct: 136 GNWWEDPVEELALSQLEGFKGNLENLKKVVTVEAS 168

[Close]

BLAST of Spg035839 vs. ExPASy Swiss-Prot
Match: O64703 (Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.4e-23
Identity = 67/163 (41.10%), Postives = 105/163 (64.42%), Query Frame = 0


Query: 1   MVKDRGSRQVTFSKRRNGLFKKANDLATLCGLQIAIVVFSPGGKAFSFGNPNVEDVVDRY 60
           MV+D  +RQVTFSKRR GLFKKA++LATLC  ++ IVVFSPGGK FS+G PN++ V +R+
Sbjct: 10  MVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKPNLDSVAERF 69

Query: 61  LNR-ESEPIPPARESGMFE---KENEELVDLIKQ-LQLEKKKGEMLDKEMKSRGE---SS 120
           +   +        +SG +    K   E +DL+ Q ++ EK++GE   ++++S G+     
Sbjct: 70  MREYDDSDSGDEEKSGNYRPKLKRLSERLDLLNQEVEAEKERGEKSQEKLESAGDERFKE 129

Query: 121 KIEELDLDALLKLKESLENLRANVKIKESELEASSSLLLLANE 156
            IE L LD L + K+ L+ +   ++ + + L+ASS L+LL+ +
Sbjct: 130 SIETLTLDELNEYKDRLQTVHGRIEGQVNHLQASSCLMLLSRK 172

[Close]

BLAST of Spg035839 vs. ExPASy Swiss-Prot
Match: Q4PSU4 (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 5.4e-20
Identity = 59/146 (40.41%), Postives = 91/146 (62.33%), Query Frame = 0


Query: 2   VKDRGSRQVTFSKRRNGLFKKANDLATLCGLQIAIVVFSPGGKAFSFGNPNVEDVVDRYL 61
           +K    RQVTFSKRR GLFKKA++L TLCG +I I+VFSP  K FSFG+P+VE V+DRY+
Sbjct: 72  IKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSFGHPSVESVLDRYV 131

Query: 62  NRESEPIPPARE----SGMFEKENEELVDLIKQLQLEKKKGEMLDKEMKSRGESSKI--- 121
           +R +  +  +++         + N +L  ++ +++ EKKKG+ +++  K     S I   
Sbjct: 132 SRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEMRKESVRRSMINWW 191

Query: 122 ----EELDLDALLKLKESLENLRANV 137
               EE+++  L ++K +LE LR  V
Sbjct: 192 EKPVEEMNMVQLQEMKYALEELRKTV 217

[Close]

BLAST of Spg035839 vs. ExPASy Swiss-Prot
Match: Q9LMM8 (Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 5.8e-14
Identity = 52/144 (36.11%), Postives = 82/144 (56.94%), Query Frame = 0


Query: 9   QVTFSKRRNGLFKKANDLATLCGLQIAIVVFSPGGKAFSFGNPNVEDVVDRYLNR----E 68
           QVTFSKRR+GLFKK ++L TLC  +IAI+VFSP GKA+SFG+PNV  ++D  L R     
Sbjct: 23  QVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSFGHPNVNKLLDHSLGRVIRHN 82

Query: 69  SEPIPPARESGMFEKENEELVDLIKQLQLEKKKGEMLDKEMKSRGESSK-----IEELDL 128
           +     +R     +  NE L +++ + + E++  + + +  +   ++ K       EL+L
Sbjct: 83  NTNFAESRTKLRIQMLNESLTEVMAEKEKEQETKQSIVQNERENKDAEKWWRNSPTELNL 142

Query: 129 DALLKLKESLENLRANVKIKESEL 144
                +K  LE L+  V  K ++L
Sbjct: 143 AQSTSMKCDLEALKKEVDEKVAQL 166

[Close]

BLAST of Spg035839 vs. ExPASy Swiss-Prot
Match: O64645 (MADS-box protein SOC1 OS=Arabidopsis thaliana OX=3702 GN=SOC1 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.4e-12
Identity = 55/164 (33.54%), Postives = 90/164 (54.88%), Query Frame = 0


Query: 2   VKDRGSRQVTFSKRRNGLFKKANDLATLCGLQIAIVVFSPGGKAFSFGNPNVEDVVDRYL 61
           +++  SRQVTFSKRRNGL KKA +L+ LC  ++++++FSP GK + F + N++D +DRYL
Sbjct: 11  IENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASSNMQDTIDRYL 70

Query: 62  NRESEPI--PPARESGMFEKENEELVDLIKQLQLEKKKGEMLDKEMKSRGESSKIEELDL 121
               + +   P  E  M   + E    + K  QLE  K ++L + +     +  IEEL  
Sbjct: 71  RHTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGI----GTCSIEELQ- 130

Query: 122 DALLKLKESLENLRAN----VKIKESELEASSSLLLLANEPVVE 160
               +L++S++ +RA      K +  +L+     L   NE + E
Sbjct: 131 QIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSE 169

[Close]

BLAST of Spg035839 vs. ExPASy TrEMBL
Match: A0A6J1EGN3 (agamous-like MADS-box protein AGL29 OS=Cucurbita moschata OX=3662 GN=LOC111434156 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.0e-70
Identity = 148/166 (89.16%), Postives = 157/166 (94.58%), Query Frame = 0


Query: 1   MVKDRGSRQVTFSKRRNGLFKKANDLATLCGLQIAIVVFSPGGKAFSFGNPNVEDVVDRY 60
           MVKDRGSRQVTFSKRRNGLFKKANDLATLCGL+IAI+VFSPGGKAFSFGNPNVEDVVDRY
Sbjct: 10  MVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIIVFSPGGKAFSFGNPNVEDVVDRY 69

Query: 61  LNRESEPIPPARESGMFEKENEELVDLIKQLQLEKKKGEMLDKEMKSRGESSKIEELDLD 120
           LNR+SEPIPPA E GMFEKENEEL+DL+KQLQLEKKKGEML+KEMKSRGES KIE+LDLD
Sbjct: 70  LNRKSEPIPPASE-GMFEKENEELIDLVKQLQLEKKKGEMLEKEMKSRGESIKIEDLDLD 129

Query: 121 ALLKLKESLENLRANVKIKESELEASSSLLLLANEPVVEADESDTK 167
            LLKLKESLE LR NV +KESELEASSSLLLLANEPVVEAD S +K
Sbjct: 130 ELLKLKESLERLRQNVSMKESELEASSSLLLLANEPVVEADASASK 174

[Close]

BLAST of Spg035839 vs. ExPASy TrEMBL
Match: A0A6J1KIQ5 (agamous-like MADS-box protein AGL29 OS=Cucurbita maxima OX=3661 GN=LOC111495601 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 3.5e-70
Identity = 147/166 (88.55%), Postives = 158/166 (95.18%), Query Frame = 0


Query: 1   MVKDRGSRQVTFSKRRNGLFKKANDLATLCGLQIAIVVFSPGGKAFSFGNPNVEDVVDRY 60
           MVKDRGSRQVTFSKRRNGLFKKANDLATLCGL+IAI+VFSPGGKAFSFGNPNVE+VVDRY
Sbjct: 10  MVKDRGSRQVTFSKRRNGLFKKANDLATLCGLEIAIIVFSPGGKAFSFGNPNVEEVVDRY 69

Query: 61  LNRESEPIPPARESGMFEKENEELVDLIKQLQLEKKKGEMLDKEMKSRGESSKIEELDLD 120
           LNR+SEPIPPA E GMFEKENEEL+DL+KQLQLEKKKGEML+KEMKSRGES KIE+LDLD
Sbjct: 70  LNRKSEPIPPASE-GMFEKENEELIDLVKQLQLEKKKGEMLEKEMKSRGESIKIEDLDLD 129

Query: 121 ALLKLKESLENLRANVKIKESELEASSSLLLLANEPVVEADESDTK 167
            LLKLKESLE LR NV++KESELEASSSLLLLANEPVVEAD S +K
Sbjct: 130 ELLKLKESLERLRKNVRMKESELEASSSLLLLANEPVVEADASASK 174

[Close]

BLAST of Spg035839 vs. ExPASy TrEMBL
Match: A0A6J1CEW1 (agamous-like MADS-box protein AGL29 OS=Momordica charantia OX=3673 GN=LOC111010863 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 5.0e-69
Identity = 143/167 (85.63%), Postives = 156/167 (93.41%), Query Frame = 0


Query: 1   MVKDRGSRQVTFSKRRNGLFKKANDLATLCGLQIAIVVFSPGGKAFSFGNPNVEDVVDRY 60
           MVKDR SRQVTFSKRRNGLFKKANDLATLCGL+IAIVVFSPGGKAFSFG+PNVEDV+DRY
Sbjct: 10  MVKDRSSRQVTFSKRRNGLFKKANDLATLCGLEIAIVVFSPGGKAFSFGHPNVEDVIDRY 69

Query: 61  LNRESEPIPPARESGMFEKENEELVDLIKQLQLEKKKGEMLDKEMKSRGESSKIEELDLD 120
           LN ESEPIPPARE+GM EKENEEL+DLIKQLQLEK++GE+L+KEMKS+ ES KIE+L+ D
Sbjct: 70  LNHESEPIPPAREAGMIEKENEELLDLIKQLQLEKRRGEILEKEMKSKEESIKIEDLNFD 129

Query: 121 ALLKLKESLENLRANVKIKESELEASSSLLLLANEPVVEADESDTKN 168
            LLKLKESLE LR NVKIK SELEASSSLLLLANEPV+EAD SDTKN
Sbjct: 130 ELLKLKESLEKLRENVKIKASELEASSSLLLLANEPVMEADRSDTKN 176

[Close]

BLAST of Spg035839 vs. ExPASy TrEMBL
Match: A0A5A7UFJ7 (Agamous-like MADS-box protein AGL29 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00320 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 7.5e-57
Identity = 128/163 (78.53%), Postives = 140/163 (85.89%), Query Frame = 0


Query: 1   MVKDRGSRQVTFSKRRNGLFKKANDLATLCGLQIAIVVFSPGGKAFSFGNPNVEDVVDRY 60
           MVKDRGSRQVTFSKRRNGLFKKA DLATLCGL+IAIVVFSPGGKAFSFGNPNVE+VVDRY
Sbjct: 10  MVKDRGSRQVTFSKRRNGLFKKATDLATLCGLEIAIVVFSPGGKAFSFGNPNVEEVVDRY 69

Query: 61  LNRE--SEPIPPARESGMFEKENEELVDLIKQLQLEKKKGEMLDKEMKSRGESSKIEELD 120
           L+ E         RE GM EKENEEL+DL+KQLQ+EKKKGE+++KEMKSRGE  KIE+LD
Sbjct: 70  LSCEWKVNRNTAVRERGMLEKENEELLDLVKQLQMEKKKGEVMEKEMKSRGELMKIEDLD 129

Query: 121 LDALLKLKESLENLRANVKIKESELEASSSLLLLANEPVVEAD 162
           L+ LLKLKESLE LR NVKI+ESELEAS SLLLLANE  V  D
Sbjct: 130 LNELLKLKESLEKLRKNVKIEESELEASFSLLLLANEKPVRGD 172

[Close]

BLAST of Spg035839 vs. ExPASy TrEMBL
Match: A0A1S3B9N7 (agamous-like MADS-box protein AGL29 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487550 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 7.5e-57
Identity = 128/163 (78.53%), Postives = 140/163 (85.89%), Query Frame = 0


Query: 1   MVKDRGSRQVTFSKRRNGLFKKANDLATLCGLQIAIVVFSPGGKAFSFGNPNVEDVVDRY 60
           MVKDRGSRQVTFSKRRNGLFKKA DLATLCGL+IAIVVFSPGGKAFSFGNPNVE+VVDRY
Sbjct: 10  MVKDRGSRQVTFSKRRNGLFKKATDLATLCGLEIAIVVFSPGGKAFSFGNPNVEEVVDRY 69

Query: 61  LNRE--SEPIPPARESGMFEKENEELVDLIKQLQLEKKKGEMLDKEMKSRGESSKIEELD 120
           L+ E         RE GM EKENEEL+DL+KQLQ+EKKKGE+++KEMKSRGE  KIE+LD
Sbjct: 70  LSCEWKVNRNTAVRERGMLEKENEELLDLVKQLQMEKKKGEVMEKEMKSRGELMKIEDLD 129

Query: 121 LDALLKLKESLENLRANVKIKESELEASSSLLLLANEPVVEAD 162
           L+ LLKLKESLE LR NVKI+ESELEAS SLLLLANE  V  D
Sbjct: 130 LNELLKLKESLEKLRKNVKIEESELEASFSLLLLANEKPVRGD 172

[Close]

BLAST of Spg035839 vs. TAIR 10
Match: AT5G60440.1 (AGAMOUS-like 62 )

HSP 1 Score: 111.3 bits (277), Expect = 7.5e-25
Identity = 69/155 (44.52%), Postives = 98/155 (63.23%), Query Frame = 0


Query: 2   VKDRGSRQVTFSKRRNGLFKKANDLATLCGLQIAIVVFSPGGKAFSFGNPNVEDVVDRYL 61
           +K+  + QVTFSKRR+GLFKKA++L TLCG ++AIVVFSPG K FSFG+PNV+ V+DR++
Sbjct: 16  MKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSFGHPNVDSVIDRFI 75

Query: 62  NRESEPIPPARESGMFEKE----------NEELVDLIKQLQLEKKKGEMLDK---EMKSR 121
           N  + P+PP + + M  +E          N  L  ++ QL+ EKKK + L K   + K+ 
Sbjct: 76  N--NNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYDELKKIREKTKAL 135

Query: 122 GE--SSKIEELDLDALLKLKESLENLRANVKIKES 142
           G      +EEL L  L   K +LENL+  V ++ S
Sbjct: 136 GNWWEDPVEELALSQLEGFKGNLENLKKVVTVEAS 168

[Close]

BLAST of Spg035839 vs. TAIR 10
Match: AT2G34440.1 (AGAMOUS-like 29 )

HSP 1 Score: 110.9 bits (276), Expect = 9.8e-25
Identity = 67/163 (41.10%), Postives = 105/163 (64.42%), Query Frame = 0


Query: 1   MVKDRGSRQVTFSKRRNGLFKKANDLATLCGLQIAIVVFSPGGKAFSFGNPNVEDVVDRY 60
           MV+D  +RQVTFSKRR GLFKKA++LATLC  ++ IVVFSPGGK FS+G PN++ V +R+
Sbjct: 10  MVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKPNLDSVAERF 69

Query: 61  LNR-ESEPIPPARESGMFE---KENEELVDLIKQ-LQLEKKKGEMLDKEMKSRGE---SS 120
           +   +        +SG +    K   E +DL+ Q ++ EK++GE   ++++S G+     
Sbjct: 70  MREYDDSDSGDEEKSGNYRPKLKRLSERLDLLNQEVEAEKERGEKSQEKLESAGDERFKE 129

Query: 121 KIEELDLDALLKLKESLENLRANVKIKESELEASSSLLLLANE 156
            IE L LD L + K+ L+ +   ++ + + L+ASS L+LL+ +
Sbjct: 130 SIETLTLDELNEYKDRLQTVHGRIEGQVNHLQASSCLMLLSRK 172

[Close]

BLAST of Spg035839 vs. TAIR 10
Match: AT3G66656.1 (AGAMOUS-like 91 )

HSP 1 Score: 100.5 bits (249), Expect = 1.3e-21
Identity = 63/167 (37.72%), Postives = 101/167 (60.48%), Query Frame = 0


Query: 2   VKDRGSRQVTFSKRRNGLFKKANDLATLCGLQIAIVVFSPGGKAFSFGNPNVEDVVDRYL 61
           V+D  ++QVTFSKRR GLFKKA++LATLC  ++ IVVFSPG K +SFG PN + + +R+ 
Sbjct: 11  VQDTNTKQVTFSKRRLGLFKKASELATLCNAEVGIVVFSPGNKPYSFGKPNFDVIAERFK 70

Query: 62  NR-ESEPIPPARESGMFEKEN---------EELVDLIKQLQLEKKKGEMLDKEMKSRGE- 121
           N  E E    + E+  + + N         + L  + ++ + EKK GE L K ++S  + 
Sbjct: 71  NEFEEEEEGDSCETSGYSRGNRARQEKKICKRLNSITEEAEAEKKHGEDLHKWLESAEQD 130

Query: 122 --SSKIEELDLDALLKLKESLENLRANVKIKESELEASSSLLLLANE 156
             +  IEEL L+ L + +  ++ +   ++   S ++ASSSL+ L+N+
Sbjct: 131 KFNKPIEELTLEELKEFEAKIKKISCGIQSNISHMQASSSLMFLSND 177

[Close]

BLAST of Spg035839 vs. TAIR 10
Match: AT2G24840.1 (AGAMOUS-like 61 )

HSP 1 Score: 99.0 bits (245), Expect = 3.9e-21
Identity = 59/146 (40.41%), Postives = 91/146 (62.33%), Query Frame = 0


Query: 2   VKDRGSRQVTFSKRRNGLFKKANDLATLCGLQIAIVVFSPGGKAFSFGNPNVEDVVDRYL 61
           +K    RQVTFSKRR GLFKKA++L TLCG +I I+VFSP  K FSFG+P+VE V+DRY+
Sbjct: 72  IKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSFGHPSVESVLDRYV 131

Query: 62  NRESEPIPPARE----SGMFEKENEELVDLIKQLQLEKKKGEMLDKEMKSRGESSKI--- 121
           +R +  +  +++         + N +L  ++ +++ EKKKG+ +++  K     S I   
Sbjct: 132 SRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEMRKESVRRSMINWW 191

Query: 122 ----EELDLDALLKLKESLENLRANV 137
               EE+++  L ++K +LE LR  V
Sbjct: 192 EKPVEEMNMVQLQEMKYALEELRKTV 217

[Close]

BLAST of Spg035839 vs. TAIR 10
Match: AT1G01530.1 (AGAMOUS-like 28 )

HSP 1 Score: 79.0 bits (193), Expect = 4.1e-15
Identity = 52/144 (36.11%), Postives = 82/144 (56.94%), Query Frame = 0


Query: 9   QVTFSKRRNGLFKKANDLATLCGLQIAIVVFSPGGKAFSFGNPNVEDVVDRYLNR----E 68
           QVTFSKRR+GLFKK ++L TLC  +IAI+VFSP GKA+SFG+PNV  ++D  L R     
Sbjct: 23  QVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSFGHPNVNKLLDHSLGRVIRHN 82

Query: 69  SEPIPPARESGMFEKENEELVDLIKQLQLEKKKGEMLDKEMKSRGESSK-----IEELDL 128
           +     +R     +  NE L +++ + + E++  + + +  +   ++ K       EL+L
Sbjct: 83  NTNFAESRTKLRIQMLNESLTEVMAEKEKEQETKQSIVQNERENKDAEKWWRNSPTELNL 142

Query: 129 DALLKLKESLENLRANVKIKESEL 144
                +K  LE L+  V  K ++L
Sbjct: 143 AQSTSMKCDLEALKKEVDEKVAQL 166

The following BLAST results are available for this feature:

BLAST of Spg035839 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023519112.1	1.9e-70	89.16	agamous-like MADS-box protein AGL29 [Cucurbita pepo subsp. pepo]	[more]
KAG6583909.1	2.5e-70	89.16	Agamous-like MADS-box protein AGL29, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022927257.1	4.2e-70	89.16	agamous-like MADS-box protein AGL29 [Cucurbita moschata]	[more]
XP_023001476.1	7.2e-70	88.55	agamous-like MADS-box protein AGL29 [Cucurbita maxima]	[more]
KAG7019526.1	4.7e-69	87.35	Agamous-like MADS-box protein AGL29, partial [Cucurbita argyrosperma subsp. argy...	[more]

BLAST of Spg035839 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKK2	1.1e-23	44.52	Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=...	[more]
O64703	1.4e-23	41.10	Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=...	[more]
Q4PSU4	5.4e-20	40.41	Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=...	[more]
Q9LMM8	5.8e-14	36.11	Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=...	[more]
O64645	1.4e-12	33.54	MADS-box protein SOC1 OS=Arabidopsis thaliana OX=3702 GN=SOC1 PE=1 SV=1	[more]

BLAST of Spg035839 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EGN3	2.0e-70	89.16	agamous-like MADS-box protein AGL29 OS=Cucurbita moschata OX=3662 GN=LOC11143415...	[more]
A0A6J1KIQ5	3.5e-70	88.55	agamous-like MADS-box protein AGL29 OS=Cucurbita maxima OX=3661 GN=LOC111495601 ...	[more]
A0A6J1CEW1	5.0e-69	85.63	agamous-like MADS-box protein AGL29 OS=Momordica charantia OX=3673 GN=LOC1110108...	[more]
A0A5A7UFJ7	7.5e-57	78.53	Agamous-like MADS-box protein AGL29 isoform X1 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3B9N7	7.5e-57	78.53	agamous-like MADS-box protein AGL29 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103...	[more]

BLAST of Spg035839 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60440.1	7.5e-25	44.52	AGAMOUS-like 62	[more]
AT2G34440.1	9.8e-25	41.10	AGAMOUS-like 29	[more]
AT3G66656.1	1.3e-21	37.72	AGAMOUS-like 91	[more]
AT2G24840.1	3.9e-21	40.41	AGAMOUS-like 61	[more]
AT1G01530.1	4.1e-15	36.11	AGAMOUS-like 28	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 119..149
None	No IPR available	COILS	Coil	Coil	coord: 77..97
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 2..162
None	No IPR available	PANTHER	PTHR11945:SF229	AGAMOUS-LIKE MADS-BOX PROTEIN AGL29	coord: 2..162
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 29..50 score: 36.1 coord: 14..29 score: 64.15
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..51 e-value: 4.9E-19 score: 79.2
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 3..48 e-value: 1.3E-22 score: 79.1
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..52 score: 21.081438
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 5..67 e-value: 1.8E-26 score: 93.8
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 3..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg035839.1	Spg035839.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding