Spg035827 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg035827
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	twinkle homolog protein, chloroplastic/mitochondrial
Location	scaffold5: 37761664 .. 37776107 (+)
RNA-Seq Expression	Spg035827
Synteny	Spg035827

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAACCTCTACCCAGAAAAGTAAAGTGGTAAAGATGAGGAAACAAAGCATACAAGGGTCTCTCCCCCTCTGTTGATGAGTGGCTTATAGAAGTCCTTGGGGGCTGGTGGCTTAAGGGCAACTCGGGGAAGTTTTACGGAGTGGTGCTTCTAGAACTCCTTTTCGGCATCAAAAAGTTCTTTTGTAATTATGATTGGAGGACGCCCTCTGGTACCTCTTTTGCAGGGAGATTCGTGTATCCCAACCTAGATTGTGTTGCTATATTTTATTTTTGTATATACAGTTTCTTATAACAAAAAAAAAAAAAGATTGAGTAGGGAGGGAAAATGGGAGGTTTTTTTTTTTTTTTTTAAGAAACAATTTCATTGATGTATGAACTTTACAAAAACGATCGAAAGCCCATGAGTGATTAGAAAAAGCTATTCTAGTTGATTAGGAGGGAAGCATATGAATATGAAGCAAATAATTTAGACATTTTACACCATGATATAGCATAATAGATGACTAGTTCAGAGAACTCTTCAAAGGCGAACTCTTTATCCTTGAAGACTGATGATGTATTTGTAATCACTCATCGGTGTTGTGAAAGTAAAGGTGTATTCATGCTTGTGGCTGCCATTAAAAGCTAGGAAAGCTCAACTTTGTTAGTATGACCGATAAATGATTGACATTTTTTTTGCATACGGGATTACTAAACTGAACCCAATCTTTCTCCACTAAATTTTGTTTAGGTTCTGATGTACTTGGGCCCCGAAGCCCTGAAGGAGGTTATTGATGAAGCAGAGTTGTATCCTATACGTGGATTATTTCAATTCAAAGATTACTTCGCCGAGATTGATGCATATTATCACAAGCAATTTGGAAATGAATTTGGTGTCTCGACTGGATGGAAGGCTCTCAGTGATTTGTACAACGTGAGTTCTAGCTAGCAAACTCTTTCTTTGAAAATATTGATTCTTTTTTTGAGCTACCGAGAGCGCTGTTATCAGGTGATGAGTAATGTTGTATTTAACAAAGAAACAGAAATACAAAAAAATTGGTAGATAAGACCTTATATGCTATAAAGCCAAGATAACTGATCAAAGAGGACCTCAATTATTAGTATTTATCATTGAAGGAGAGTACTATCAATGTAGAAAAGATGTTGATTTTCTCATTTGCTTGTTACTTTACTCAAGGACAGCACAGCAACCCTTCCTTTCTAATCCATTGAAAGCATCCAGAAATTTCTAATGACACGTTGCAAAAATCTATATATTTTCATCTGTGCAATAGAACCAGTGTTTCTTTAAACCTGCAAAACTCTTTGTTTTTTTAAAAAATTAATATTGCTGCTAATATTTCTACTATTTCTAGATCTTGACTTTTTCCTGGATGTTATTTATTTCTCTGGTGAGGGATGATTTTGAGCCATCCGACTGGAAACTTCTTTGAGCTTATGCAGAATGTTTCTGCTGTGAATGCAAGATTATTCCAGTTGCATTTAGGCGCCTGATAGTTAATAGAGCTACAATTCTTTACCTTGATGATTTGATTATGTAAATTACTGGTTTTGTTCTTTTATTGAATGGGGGTAATTAGATCTTCTCCTGTGTATTGTTTCCTATTGTAGGATCTGATCCTTTTTTATGTTGGAATAAGAAAACTTACAAAATTTATATAAGCAAAATAATATTTTTTAGATTTGTAGCTAAAGCCTTTCTTCTTAATCAGGTTGTCCCGGGGGAGCTTACTATAGTTACTGGTATTCCTAACTCAGGCAAGAGTGAATGGATTGATGCTCTGCTATGCAATCTTAATGCAAATGCTGGTTGGAAATTTGTTCTCTGCTCTATGGAAAATAAGGTGCTCTTCATACGTCTGAGTTGCCCGTGATTAACATTTTTCTGTATGATTTTAACTTATCGATCCTTTTGTCCAAGCACTTGATATATGAATGAATTTTGCGTGATGTGGAACATATTAGATCTCAGCATTGTATTCTTTATTATATACTTTTCAGATGGAAATTTTAAGTTTGGGATTAAAAGGTCTCTGAACTTTTATAGGGTGTGTCGAGTTTTTAATTTTGTGTCTAATAGATTTCTGAATTTTAAAAATATCTAATAGGTCTTTAAGCTTTTAATTTAACAGGTCTCTGAGATGTTAAAAAAATTTTAAAATTAATTGAACTATTAGATATACAATTGAATTTTGTGTCCTAAGATCATACACTTTCAATTTTGTGTAAGACTTGTTGAATACTTTTTAAAGTTCAGGGATTTTTTAGATACAAAATTGAAAATTCAGTTATTAGATACTTTTTTAAAGTTCAATGACCTGTTGGGCACAAAATTGACAGTTTAAGTACCCTATTAGACACTTTTTGAAGTTTAGGTACGAAATAGACACAAATCTAAAAGTTTAGCGCTCTCTCTCTCTATAACAAATAAATAAGGAAATCCACAGGTGTTATTTCTTATTTCCCACCTTCTTTTACCATGTTTCAATTTAAATTTGTTTTGATGAATTTGTTAACAGGTTCGAGAGCATGCAAGAAAACTATTGGAGAAACGCATCAAGAAGCCTTTCTTTGTTGCACGGTAAGTTTTGGATTATAATGTGTGCTCTCACTGCCTTTGATTTCTACAACCATCATATTCCACCAAAAGATCTCGAGTTCAAAGTGATTGAGTGGCCTTGCTGCTGAGATTTATTTGTTGCTCTGATTTAATGAGAAGAAAAAATGAGAAGAAAAAAAAAGAAGAAAAGATCTTGAGTTCAAATGTAAAGCCTCCTACCTGAAATATTAATATCACGTGTCCATTATGATTTATGAGTCTTCTTCCTCACAAGTTAGACATTTTCTAAAAAGAGTAGGAAGTAAGGAGCTAAGGCATTGAGGCGTGCACCTACCTATTAGATTACATGGGATTCCATCTCAAAACCAATTGGGAATGAGTGGAGTAGCCCATCTATCTTATGAATTGGGAGGTCTCCATCTATCTTTTCAATGTGGGATCCTCAACACTACCAATGGGCCAAACCTCTTCCCAAGACATATCCACACTCATAAAGAGTCAATTATTTCTCTCAAGTTAGATATCTCATTAAAAAAAATAAAACCTGCACACCAAAGCACACCACCCTTATCCTTGAAGGGTGTGTGATACAAAGCCTCCTCTAAGACAACCATCCTTGTTACAGGCCATACTAACTCTAAAATCCTCCAAAATAACAATATGAAATTGTGCGAGCATACTGACAACTCCACAAGATATGACCCAAGCCTCGGACATTCACGTAAAAATTAATGCTCACCACACTACAGAAGTGTGTCAACCTTGGTTGAGACTACGAAGCTTTCATTGTATAAGGGGCCAATTTCTCATTGCTCCTTTTAGCAATCAAAATCTGTCTATATGGCTGAAGTTTTAAACAAACGTCATCCTCAACTTGAAAACACACCTCACACTATTTCCTTGAACTAATGACTATAATCAGCACCTTAGGTTTTCTAACATGTAATTGTTACCATAAATATTATTTGCAAAATTCTTGGCCATATAAGTGAGAAGGGCTTATTTTGGAGATAGTTTTTTGTTTTTTAGATTAAAAATTTGGTGAAAACTCTTTTTTTTTTTTAGTTTTCACGAGGGATATGTTGCTGTGTAGAACATTTCTTCCAATATCATGACTCAAGAGCTTTGTGAATAATAGTTTGAATAGAAGTAATCTTAAACTTTACAAGCTACCTAATAGTAATCATAATGCTTGAAAACAATTTGGAAAACAAAAGTAGAGAACTGTTTTGGAGATGATCACCACCTAGCCTTTTTCTCCTCTTCCTTGATATTTCTGCAATAATGTTGACTAACTTTGTCTTTCATCTTTTGTGGTCTCTAGTTATGGTGGATCTGTAGAACGAATGAGTGTTGAGGAGTTGGAACAAGGCAAGCAATGGTTAAATGATACATTTTTTCTTATAAGGTAAACGGAAAAATTGAAGAAATATTTTGTTGCTTATTTTTCATTACTCATATATTACTACTAGTACTGCACATCTGGGTTCATAGTACTCTCTGTGTTGACTGGCTGGGGATCGATAAAATGTGCCTTTTAATTATAATTTTAAATGGCAAGTTTTTGTAAAGAATGATCTTTAGTTCGTAACCATAAGATATATGTATCCGATCATTGAATTTTGGTAGTATCCGTGAAACATTCTAGTTCTACATTACATTATCGTTTGTTTTAAATACAGTCCAATAGTCAATTAGTTCTCTGATCAAAGAATATAACAAGGCATGAAGAAAATGAGATCTTGATTTTGTGGGTCCTTCTTTTTCTTTTTTTTTCTTTCTCGTGGCTTTCTCAGGATCATTTTTATAACATTAGATGCAATTTCACACCAAAATAATGTTGTGTATTTAATACCAATTCTCTATTGCATATGCTTAATATTTCATTCGATGTTTTGCTTTGATGGGGTAACTTTCCTTCAATAAAAGTGTTACTGAAGTTTAAAAGGAGGAAACTGGAAATTATAAGGTTCGAAAAAAAGGAAATACTTCTACATGTTATACTCGACTCTCTGATTAATCTAGTGCATTACAAATTGATGTTTTCACAAAAAATAATTTAAATCATAACAAGTCCCTTTTTTTTTTTGCATTTTTGCATTTTTGCCTTCCATTAACATCTTAGTGTGCTTTTGAAAATGTTCTTTATCTTGTTCACTGGGCTAGGTGTGAAAATGAGTCCCTCCCGAGTATTAATTGGGTTCTGGATCTTGCAAAGGCAGCAGTTTTAAGGCATGGAGTTTCTGGACTGGTAATTGACCCTTATAATGAGCTTGATCATCAACGGCCTTCAAACCAGTGAGTGTATCGTTATGTTTGTTCTTTGAAGATGCAGTAATCCATCATATCTCCTGTGGCCTTCAACCACTGACTGATGACTATGCTTTCTTAGATTTCAGTGATAATACCTTGCTTTTCCTGTAATTCACTTCTTCTTTTTGGGTTCTTATAATCCCTTAACTTCCTGGAAAGATTTTGTCATCTTTTTTCCTTGAGCAGAGTATTTTCTCTCAGGTTTAATGAGAAAAAAGCTTGCTGATATTTTCATTTTGTCCGCTTTTAAGGAGCAGTTACAACATTAGTAAATTTTGCATTTCACTATTCAAGATGCTTAATTTTTTTTTTTTAACAAGAAATAAAGTTTTCATTGAATAACTGAAAAGAGAAAAGAGACTAATGTTCAAAGATAGAAACTCCACATGGGAGTGAAAAAAGGAACAAAAAAGAGAAATAAAAGGGACAAGGAAGCTCCCCAAGAAAGAAAAAACTGAAAGAACATACTTGAAAAGAACTTGACTTCAAAAAAATAAAGAGTTGAGAAAACCAGAGACAAGCTTACAAAGAGAGAATCCCTGAAATCAAACACTAAAGAAAGCCTGCTGAAAGAACACTAAAAGACAACCGAAAAAAAAAAGGAAAAAAAACACCCGGGAACCACTGAAGATGAAACCAATTGAAGAGAATCTTGAACTGGAGCTGAAACCACCAAAGAAGCCAACATAGAAGGATGCTGAGCAAATCACTTAGATAGCAAACTAATATAGAACACTTGGAAGCTTGAAAGAGAATAACCAAAAGAGGGCCGAAAAGGTTTTTCCTACGCTCTTAGATAGCATAGTCAAAATTTCCGTTGTCTTATAAAGCATTATTTGTGTGGTGATATATCCCAACTCTGTACTTTCAAAAACTTAATTTATTTCTCCTGCTGGCGGCCCTGCAGAAAGATCTGAGCTCCAAACTTTGGCTTCTGCTTTTCACCTTTTGTTGTTTATTGTATAGTTAACTAGAAGTTTGATGATTATTTGTGACAGGACTGAAACGGAATATGTAAGCCAGATGCTTACTAAGGTCAAACGGTTTGCTCAACATCACTCTTGCCATGTTTGGTTTGTTGCACATCCTAGACAGGTTGGTCATTAAACTGTCATTCTTTCTTGTGGTCACCTACCCCCCGTTCAATAATTAGTAAGTGTTAAGAAATGTTTAATTTAAGATTCTGAAAATTCTTAGACTGTTAATTGTAGATTATTTCAATTTTAAATTTATGTTTTTCCTTATTTAGATTAGATTTTATTCTATCTTTATAGTTTCCTTTTATGTATTTTTATGATGTATATATCTTCTTGTATTTTGGGTAATGAAATGAAGAAAATAATTTTCTCCCAAATCCACATGGTATCAGAGCCACTCTCAAATTAAAACCCTAACCCTAACCCTAGCCGTCAGACTTCACCGGCGAGCTCTCCTTCCGGCAACTCTTCGGCGTTTCTTCTCCGGCGAGCTCGTTCCGTTCGCTCGTCGCTCGCCGCCCGTTCGCAGCTCGTTGCTCGCCGCCCGTTCGCAGCTCGTCGCTCGCCTTCTTCCGCCGCTCGTCGCTCGCCTTCTTCTCCCTGGCGCCGCGACACTTCTCCGCCGTCTAGCCCCTGCAGCGGCACGAACCGTGCAGCCCGAATCCCAGCGCGAGCGCCGCCTCCTCTCACGGTGCTCTCTCCATCTCCGCTGCCCAGATCCGGCCGCACCGCACCTCCCACCGTGGTTTCTCTCCTCTTCAGGGCCGATTTTGCTCAGTTTTGTTGCTCGGTTTTTTGGTCTGCTTGTTTTTCAGATTTGGCTATTTGGTTGTTCGAGGCCTTCAGCGATTTCAAATGGCGAAACATGGGTTAGCAAGTGTCAGTTATGAAAACTCCTCTCAATCTCACGATTCCTCTCCTCAAATTGTGACTAATCATAAACTTCAAGGTCACAATTTTCTTCAATGGAATCAATCAGTCTTCATATATATCTGTGGCCGTGGTAAAGATGGTCATCTAACTGGTGATACCCCTGCACCGGATGCTACAGACCCGAAGTTTCGATCGTGGAAAATTGATGATCATTTGGTCATGTCTTGGCTACTAAACTCTATGACTCCAGAGGTTGGAGAGAACTTTCTATTGTTCAAAACAGCAAAAGAGATATGGGATGCAACCCGTGACACCTATTCTAGCTCAGAGAACTCATCTGCTCTATTGGCTATTGAAACCCGGTTGTATGATTTACGTCAAGGAGACCTCAATGTTACTCAGTACTTTAATCTTCTTGTTCGAAACTGGCAACATTTGGATATGTATGAAACATACGAATGGAAGTGTGGAGAAGACATGACTCTTTACAAAAAGATAGTTGAGAAAAAGAGAATATTGAGGTTCCTTCTAGGACTTAATAAAGAGCTAGATGACGTAAGGGGAAGAATTATGGGAGCAAAAGATCTTCCCTCTCTTAGGGAAGCTTTTGCTGAAGTACGACGTGAGGAAAGTAGAAAACACTTGATGATGCCTGAGATTGGGTCCTCTACTGGACCAGAGGTTTCGGCCATGTTGACACACAGTTCATCTCAAGAGTACAAATCTAAGAAAGGCAATCGTCCTTGGTGTGATCATTGTAAGAGAGTGGGACATGTTCGAGATACTTGTTGGAAAATTCATGGCAAACCAGCGGATTGGAAACCAACGAGGAAAGGGACAATCGAAAATCATGCTCATGTTGTTACTTCTCCTTCTCCACATCCAACTTCTGCTGTGTTTTCGAAGGAACAATTAGACGTGTTACAACAAATGATTGGCCATCTTTCATTATCGACATCTACTCCCACAACCTCAGTTGAGAAACCTTCTAGCAATCTTGCTTATCAAGGTACTGGTCTTTCTTGTTTTTCTGTGCAGCATAACAAGTCTAAACCTTGGATTGTGGATTCTGGAGCATCAGACCATATGACCGGCGACATTTCCTTATTCCACCAGTTCAAATTCCAACCTGGCTATTCGTCAGTTCGAATAGCTGATGGATCTCTCTCTGAAGTTACAGGGACAGGGTCAATAAAGTTGACAAATGATCTCGTTCTCTCTAAAGTGCTTTATGTTCCTAAGTTGAACTTCAATTTGATTTCAGTTAGCAAACTTACTGGCGATTCGAACTGCATTTCTAATTTTTACTCAAACTTGTGTGAATTTCAGGAGGTGGATTCGGGGAAGGTGATTGGCAGTGCTAAGCAACATGGTGGCCTCTATCTTCTTCAAGAAAAGTGGCCTTCAAGTTCCGTCTTCAGTTCTAGTTCTAAGTTTTCTTCTCAGTCTGTTAGTTTTGTCTCCAAGTCAGAGTCCTTGTCAATTGAAAGTCAAGTCATGTTATGGCATTTACGCCTTGGTCATCCAAATTTCATGTACCTTGAAAAGTTGTTTCCTGATTTATTTATCAATAAAAAGTCGTGCTTCTTCCAGTGTGAAACTTGTCAATTATCTAAACACACAAGAAATGTTTATCCTAGTGTGCCCTATAAATCTTCAAAACCGTTTTCACTTATTCATAGTGATATTTGGGGGCCTTCTAGAGTGAAAAATATATCAGGAGCACGATGGTTCCTCACCTTTATTGATGACCATACCAGGATGACTTGGACATTTCTAATGAAGGACAAATCTGAAACACCAAATCTTTTCCGTTCTTTTCATGCTATGATCTCTACTCAGTTTGAAAGTAAAATTCAAGTTCTCCGAACAGACAATGCTCGAGACTATTTCAACTCGATTCTTGGTACATATCTCTCATCTCATGGTATTGTTCATACTAGTTCATGTGTGGACACTCCACAACAAAATGGGATTGCTGAACGGAAAAATAGACATCTTCTTGAGGTAGCTCGTTCTCTCATGTTTTCTACTAATGTTCCTACCCATTTTTGGGGGGAAGCCATTCTCACTGCAACCTTTCTTATCAATCGGTTGCCTAGTCGTGTCCTCGCTTTTAAATCCCCTCGAGATGTCCTTCTCCAAATTCACCCTCAATTCCAAAACCTTTCCTCAAATTTACCCCTTCGGGTGTTTGGTTGTTCTTCCTTCGTTCATAACCATTCTCCTCACAAGTCCAAACTTGATCCAAAATCCATCAAGTGCATTTTTCTAGGTTATGCATCCCATAAAAAGGGGTACAGATGTTATTCACCTATCACTAGAAAAACGTACACGTCCATGGATGTTACATTCTTTGAAAATCATCCTTTCTTTACCAAGTCTCAAATTCAGGGGGAGAATATACAAGAATTTGAGCTTTTGGATGTTGAGCCTTATTCTGTCATCCCTACTATTCCCATCATAAATGAGGTCTTAACCCCTACCATAAACGAGCCACCTATTTCTGAGTCTAGTATTTCTGAAGTCGAAGTCCCACAAACTCGCACACCTATTGTTTATACAAGAAGAAAAGAGGCTACCATGCAAAACCAAGAATGCCAACCACCTGAACCAGATTCATCATCACTGAATTCCACTGACGAGAACATCACCGTTATGGCACCTGTAATTGATGATCTGACCCTACCAATTGCTCAGAGAAAAGGTGTTAGAAGTTGCACTAGTCATCCCATTGAAAAATATGTTGCATATGGCAAATTGCTTCCTACTTATAAAGCTTTTGTGACTCAGTTAGACAATATTCACATTCCACAAACCATTCAGGACGCACTCAAAGATCCGAAATGGAAAAAGGCAGTGGATGAAGAAATCAAAGCTCTTGAAAGCAATGGAACATGGACTCTTACAAAACTTCCTCATGGAAAGAATCCAGTTGGTTGCAAATGGATTTTCACTGTCAAATACAAATGTGATGGCAGCGTGGAACGGTTTAAAGCTAGGCTTGTTGCGAAGGGTTTTACTCAGTCATACGGTATAGATTACCAAGAAACCTTTGCCCCTGTTGCGAAACTGAATACTGTACGTGTTCTATTGTCTCTAGCTGTGAACCAAGATTGGCCCCTTCACCAACTTGATGTCAAAAATGCATTCTTGAATGGTGATCTCGAAGAAGAAGTTTACATGCAAATTCCCCCCGGAATGGAAGACAAGTCTAATAGCAACTTGGTGTGTAAGTTAAAAAAGTCTCTATATGGATTAAAACAATCTCCACGTGCTTGGTTTGACAGATTCACTAAAACACTGATTAAAAGTGGCTATTATCAATGTCAAGCTGATCATACCTTGTTTGTGAAATCCTCAAATAACAAAACTGCAATTTTGATTGTATATGTAGATGACATCATCATTACAGGGAATGATTTAGAGGAGATCCTCAACCTGAAAAAGATGCTTGCAACTGAGTTTGAAATCAAAGATCTGGGAAACTTGAGATATTTTCTAGGCATGGAAGTGGCACGATCCAATAATGGTATTGTAATTTCTCAGAGAAAGTACATCCTAGATTTATTAAAGGAGACAGGAAATCTTGGGTGTAGACCTGCAGAAACACCCATGGATCCAAATCTAGTTTTACATCAAAGTGAAGATGTTGTCCCAGTTGACAAGGGCATGTATCAAAGACTTGTGGGAAAGTTAATTTATCTATCTCATACCAGACCAGACATAGCATACTCTGTTAGCGTTGTTAGCCAGTATATGAACAATCCAAATGAACGTCATCTTGGAGCTGTGAACAGAATTCTGAAATACTTGAAAGGCACTCCAGGTCATGGTTTATTGTTCAAAAAATCTTCAAACAAACTTGTAGAACTCTACACTGATGCTAGTTGGGCTGGAGAATTAACTGACCGAAAATCTATGACGGGCTATTGCTCATATGTTTGGGGTAACTTGGTCACTTGGAGAAGTAAAAAACAAGCTGTTGTAGCAAGAAGCAGTGCAGAAGCTGAATACAGAGCGCTTGCTTTGGGAATATGTGAAGGAATATGGATTCAGAAACTTTTGACAGAGTTGAAAATTGATACTCAGAACTCAGTAAAATTGTTTTGTGATAGTCAAGCAGCCCTCAGTATTGCAAAGAATCCTGTTCATCATGACAGAACAAAGCATATAGAGATAGATCGACATTTCATATTTGAAAAGGTCAACAGTAGAATAGTGGAACTAAACTATGTTCCATCTCGTCATCAAGTTGCCGACATTCTCACCAAAGCATTACCAAGAACAAGCTTTGAAGGATTCAACTCCAAGCTTGGCTTGTACACTATATACAATCCAGCTTGAGGGGGAGTGTAGATTATTTCAATTTTAAATTTATGTTTTTCCTTATTTAGATTAGATTTTATTCTATCTTTATAGTTTCCTTTTATGTATTTTTATGATGTATATATCTTCTTGTATTTTGGGTAATGAAATGAAGAAAATAATTTTCTCCCAAATCCACATTAATTAATAATAATTACATATGATGACTTTTACAGTACTTAGATCAATGAGCTAGTTACAACAGCAAGAGGAATAAATTGATAAGGAAAGATAGAGTGACAACAACTCGTTCTTAATGTTGTTCAGTTTCTTCAAACTTGTATATTTAATAGGATCACTCTCAAAGATAAAATTTACTTTAAAAAAATGTTAGTTCAAGAAACAAGAAGATTCCTTGATTTAAGGGAAATTTCCTAGAAAGTAATGTCATTTGGTCATATAAGTGTAATATAAGGTCCTAAATTCTCTTTCCAAACTCAACTCATGATTTGACCAAAATCAAGTCAAAGTATTTGGTTCTACAATAATTGACAAATATTCAATTGAGAAAAAAAACGTTGGGACTCAAATATTTTGGCCACCCAAAGTAAAATCCAATACTTCTCATTGCTTTCACAGTTTCACTTCAATTTTTATATTTTAGCTATTGTAGTGTCAGTTTTTCACTCTTTCTAGTATCATTTCTGTTTTTTCATCTTTGCACCCTTTCTCACATTTTTCATTGCTCTGTGTACAGTTGCAGAACTGGTCTGGAGGTGCACCTAATATGTATGATATAAGTGGAAGTGCACACTTCATAAACAAATGTGATAATGGAATCGTTATTCATCGTAATAGGGATCCCGACTCTGGTCCTGTTGATCTCCTACAAGTGAGTAAAATAGTGGATATGTCATAAAAAATATGTTTATTTGATTTCTTTTTTTTTTTTCACATTATATTTTTGTGTTCTTGCTACTTGTAGGTATGTGTACGGAAAGTAAGAAATAAGGTTGCAGGAACAATTGGCGAAGCTTACTTGGCATATAATAGGTACGTCGAGATTTTCATTCAAAGTTCTTGCAAGAATTCACATATTGATTCTGACGTCTTGTGGTGGTGAATTGTATATGCTTTATATATGATTTCTGGAAATTTATTTCCTTGATAATAAGAGTTTTATGGAAAAGAACATTAGAGCAAAAATATTTTCAGTCTTTTGAACAAACTATTTGAAAACAAACTCAAGCTTTTATTTTTGATAACACGACCAAGCTAGCTGGTTATTCATTGTGGTATTGCACATTGTATGTACTTTGGTCAATTTTTTTGTGGAAGGATTTTTGGATTGCTGATTGTGTAATCAGAAGAAAGTAAAAGGAGAAATACCTTATCTCAAAATTAGCTCAGCTTGATGCCTCATCAGATCCGAGAGTCCTTTCCTCCAATGTTCTCCATGTGCGGTCTTTTGCCATGGGTGATTTTCTGAAGCTTTTTTTGGTGGAGGAGAGTCACGTGATTAAAAAATATGGAGGTTCTTTTCTTTCATTTGGTGAAATTTTAGTAGAAATTCTTGGCCATCCAATTCTTTACTTAAGAATCTTCCGGCTCTATTTTCATAGTTTTTGGTTGGATCGTATTCATTGGATCTTTCAAAGCAAGTCTCTTTCTTGACTCGTCCGGTTTGAACCAGCTCGTCCACAGGCCTCTTCTTGGTGTTCTCTCTCAAAGATTTTTGTTTGTCTTCTTATCATAGAATTTTTGTTTTATTTGGAATGTTATTTTTTATCCTCTGTCATTTGTTTTGTTTAGTCCTTTTGTTTTTTTTTCCTCTTTCTTTTAACTCCCTCGTGGAATTTGTATCCTTTGAGCATTAGTCTCTTTTCATTTCATAAATGAAAAATTTTGTATCTTGTTAAGAAAAGAAAAAAAAAAACCCTACACAAGCCCTCTCTCCTAGTTGGTGCATTATGTGCAAGATGAATTTCGAGACACAGGCACATCTTTTGCTCACATGATCTGAAAAGGTGAATCCTTTAACTGGAGCGTGGCTCTCACTCCTCACCATCCCTTCACAAAAGAGAAGGAACAATTTTGGCTAAAATCAATAGGGAATTCTTTAGGTTAGTATAATGATCAAAAGGAACAACACTTGGACATTGTTGGATGAGGATATGCTTAAACCGTTTTTTTTTACCAAAAATTAATGGTTGTTGGCCTTTGGAAATTTTCCTAAAAGAATAATGGTGCTCTTGTTGGGAAGTGTCTTTGGAAATTCTTTGAGGAGAGATCCATATTTTTTAAAGCCCAAGGTGCATTTAGGCACAATGACCCTCTGGGGCTTAGGTGCAAGGCGCAAAAAAAGATTCAGGGTTTTTTTTGCAAGGTGCACTATGTATAAGAAAAACATAAAAAATTTATGTTAGGTATATAACAAATTATGAACCTAATTGATCAATTTAATTGTCTCATTATAGAAACTTTGACTAACTTTAAAAAGTTAAAAGAGAGAAAGAGAGACAAAAATTGAGAGTGAGATGGAGAGAGAGGAACCAAGTGAGGAATGAAATTGAGAGAGAAGCATCATTTGGGCGAAAGATAGAAAGAGAGAGAGTTGGGAGGGAGAGATGATTCAAGAAAGAAAACCAACAGAGAAAGGGAGCTTACCAGAGCTGGTGGCATGAGAAGTAGAAGCAGTGATTTGAAGAGATGAAGAAGAAGATCTTTGTTCTTAACATGTACTTAAAAAAATTATAAAAGATAACCCTAAACACAAAAATCCTTGCGTTTAGGGTTAAAAAAGTATTATTTTTAAATAATAACTTAGGCATTTAGGGTTATGGAATATTTTATTTAAAAAAAAAAAAGCGACAGAAGCGCACTTAGGACACCTTGGCACTTCATGGAAGGCGTGCGCCTTTCTAATAGCGCCTCGCTTCTTCAAAGTGAGGCATTATAGGTGTGAGCCCTTATGCGCCTTTTAAAACACCTGGAGAGATCAACATTGTTGCTATTGTTGGTCCTGAAGGGTTAGATGCTCTGAGTTTACTACTCGCACTGGTCAAAGCTCTTAGGGTCAGTCTTTAAAACTAGAACACGGAGTCTCTTTGTGGAGAGATCAATGGATTGTTGTGTTTTAAAGTCATACTTTGGGAAGATTTATGGACAAAAGCCACCACTTATGCCAATGATAGAACATGTAGTCTCTTATCCATAAGTTAGAAGAATTCATGGAGTCAGAATGTTGGACTTTTAATGAAAGAAATTTTGAAATAGGAATCTCCCTCTAATCTCTGGAGAGGCAACTGCATTCCCTTTTTGATTGAATTCTTGAGTTCAGATGCTTTAGCCTTCTTATCGAGTTATTCACAATCGCTGCTAGATCGTTTGCTGCAAGGGCTGAATGACTGA

mRNA sequence

ATGCAACCTCTACCCAGAAAAGTTCTGATGTACTTGGGCCCCGAAGCCCTGAAGGAGGTTATTGATGAAGCAGAGTTGTATCCTATACGTGGATTATTTCAATTCAAAGATTACTTCGCCGAGATTGATGCATATTATCACAAGCAATTTGGAAATGAATTTGGTGTCTCGACTGGATGGAAGGCTCTCAGTGATTTGTACAACGTTGTCCCGGGGGAGCTTACTATAGTTACTGGTATTCCTAACTCAGGCAAGAGTGAATGGATTGATGCTCTGCTATGCAATCTTAATGCAAATGCTGGTTGGAAATTTGTTCTCTGCTCTATGGAAAATAAGGTTCGAGAGCATGCAAGAAAACTATTGGAGAAACGCATCAAGAAGCCTTTCTTTGTTGCACGTTATGGTGGATCTGTAGAACGAATGAGTGTTGAGGAGTTGGAACAAGGCAAGCAATGGTTAAATGATACATTTTTTCTTATAAGGTGTGAAAATGAGTCCCTCCCGAGTATTAATTGGGTTCTGGATCTTGCAAAGGCAGCAGTTTTAAGGCATGGAGTTTCTGGACTGTTAACTAGAAGTTTGATGATTATTTGTGACAGGACTGAAACGGAATATGTAAGCCAGATGCTTACTAAGGTCAAACGGTTTGCTCAACATCACTCTTGCCATGTTTGGTTTGTTGCACATCCTAGACAGTTGCAGAACTGGTCTGGAGGTGCACCTAATATGTATGATATAAGTGGAAGTGCACACTTCATAAACAAATGTGATAATGGAATCGTTATTCATCGTAATAGGGATCCCGACTCTGGTCCTGTTGATCTCCTACAAGTATGTGTACGGAAAGTAAGAAATAAGGTTGCAGGAACAATTGGCGAAGCTTACTTGGCATATAATAGCGTGGCTCTCACTCCTCACCATCCCTTCACAAAAGAGAAGGAACAATTTTGGCTAAAATCAATAGGGAATTCTTTAGGTGTGAGCCCTTATGCGCCTTTTAAAACACCTGGAGAGATCAACATTGTTGCTATTGTTGGTCCTGAAGGGTTAGATGCTCTGAGTTTACTACTCGCACTGGTCAAAGCTCTTAGGGTCAATGCTTTAGCCTTCTTATCGAGTTATTCACAATCGCTGCTAGATCGTTTGCTGCAAGGGCTGAATGACTGA

Coding sequence (CDS)

ATGCAACCTCTACCCAGAAAAGTTCTGATGTACTTGGGCCCCGAAGCCCTGAAGGAGGTTATTGATGAAGCAGAGTTGTATCCTATACGTGGATTATTTCAATTCAAAGATTACTTCGCCGAGATTGATGCATATTATCACAAGCAATTTGGAAATGAATTTGGTGTCTCGACTGGATGGAAGGCTCTCAGTGATTTGTACAACGTTGTCCCGGGGGAGCTTACTATAGTTACTGGTATTCCTAACTCAGGCAAGAGTGAATGGATTGATGCTCTGCTATGCAATCTTAATGCAAATGCTGGTTGGAAATTTGTTCTCTGCTCTATGGAAAATAAGGTTCGAGAGCATGCAAGAAAACTATTGGAGAAACGCATCAAGAAGCCTTTCTTTGTTGCACGTTATGGTGGATCTGTAGAACGAATGAGTGTTGAGGAGTTGGAACAAGGCAAGCAATGGTTAAATGATACATTTTTTCTTATAAGGTGTGAAAATGAGTCCCTCCCGAGTATTAATTGGGTTCTGGATCTTGCAAAGGCAGCAGTTTTAAGGCATGGAGTTTCTGGACTGTTAACTAGAAGTTTGATGATTATTTGTGACAGGACTGAAACGGAATATGTAAGCCAGATGCTTACTAAGGTCAAACGGTTTGCTCAACATCACTCTTGCCATGTTTGGTTTGTTGCACATCCTAGACAGTTGCAGAACTGGTCTGGAGGTGCACCTAATATGTATGATATAAGTGGAAGTGCACACTTCATAAACAAATGTGATAATGGAATCGTTATTCATCGTAATAGGGATCCCGACTCTGGTCCTGTTGATCTCCTACAAGTATGTGTACGGAAAGTAAGAAATAAGGTTGCAGGAACAATTGGCGAAGCTTACTTGGCATATAATAGCGTGGCTCTCACTCCTCACCATCCCTTCACAAAAGAGAAGGAACAATTTTGGCTAAAATCAATAGGGAATTCTTTAGGTGTGAGCCCTTATGCGCCTTTTAAAACACCTGGAGAGATCAACATTGTTGCTATTGTTGGTCCTGAAGGGTTAGATGCTCTGAGTTTACTACTCGCACTGGTCAAAGCTCTTAGGGTCAATGCTTTAGCCTTCTTATCGAGTTATTCACAATCGCTGCTAGATCGTTTGCTGCAAGGGCTGAATGACTGA

Protein sequence

MQPLPRKVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDLYNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVLCSMENKVREHARKLLEKRIKKPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGVSGLLTRSLMIICDRTETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAPNMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYNSVALTPHHPFTKEKEQFWLKSIGNSLGVSPYAPFKTPGEINIVAIVGPEGLDALSLLLALVKALRVNALAFLSSYSQSLLDRLLQGLND

Homology

[Close]

BLAST of Spg035827 vs. NCBI nr
Match: XP_038894379.1 (twinkle homolog protein, chloroplastic/mitochondrial [Benincasa hispida])

HSP 1 Score: 550.4 bits (1417), Expect = 1.2e-152
Identity = 262/300 (87.33%), Postives = 279/300 (93.00%), Query Frame = 0


Query: 7   KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDL 66
           +VLMYLGPEALKEV+D AELYPIRGLF FKDYF EIDAYYHK+FGNEFGVSTGWKAL+DL
Sbjct: 400 EVLMYLGPEALKEVVDNAELYPIRGLFSFKDYFDEIDAYYHKKFGNEFGVSTGWKALNDL 459

Query: 67  YNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVLCSMENKVREHARKLLEKRIK 126
           YNVVPGELTIVTGIPNSGKSEWIDALLCNLNA+AGWKF+LCSMENKVR+HARKLLEK IK
Sbjct: 460 YNVVPGELTIVTGIPNSGKSEWIDALLCNLNASAGWKFILCSMENKVRDHARKLLEKHIK 519

Query: 127 KPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGV 186
           KPFF ARYGGSV+RMS+EELEQGK WLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGV
Sbjct: 520 KPFFAARYGGSVDRMSIEELEQGKLWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGV 579

Query: 187 SGLLTRSLMII-----CDRTETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAP 246
           SGL+      +      ++TETEYVSQMLTKVKRFAQHH+CHVWFVAHP+QLQNWSGGAP
Sbjct: 580 SGLVIDPYNELDHQRPPNQTETEYVSQMLTKVKRFAQHHACHVWFVAHPKQLQNWSGGAP 639

Query: 247 NMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYNSV 302
           NMYDISGSAHFINKCDNGIVIHRNRDPD GP+DLLQV VRKVRNKVAGTIGEAYLAYN +
Sbjct: 640 NMYDISGSAHFINKCDNGIVIHRNRDPDFGPIDLLQVSVRKVRNKVAGTIGEAYLAYNRI 699

[Close]

BLAST of Spg035827 vs. NCBI nr
Match: XP_023000969.1 (twinkle homolog protein, chloroplastic/mitochondrial [Cucurbita maxima])

HSP 1 Score: 545.0 bits (1403), Expect = 5.1e-151
Identity = 258/300 (86.00%), Postives = 280/300 (93.33%), Query Frame = 0


Query: 7   KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDL 66
           +VLMYLGPEAL+EV+D AEL+PIRGLF FK+YF +ID+YYHK+ GNEFGV TGWKAL+DL
Sbjct: 402 EVLMYLGPEALREVVDNAELFPIRGLFNFKNYFDDIDSYYHKKGGNEFGVPTGWKALNDL 461

Query: 67  YNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVLCSMENKVREHARKLLEKRIK 126
           YNVVPGELTIVTGIPNSGKSEWIDALLCNLN ++GWKFVLCSMEN+VREHARKLLEKRIK
Sbjct: 462 YNVVPGELTIVTGIPNSGKSEWIDALLCNLNESSGWKFVLCSMENQVREHARKLLEKRIK 521

Query: 127 KPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGV 186
           KPFF ARYGG+VERMS++ELEQGKQWLNDTFFL+RCENESLPSINWVLDLAKAAVLRHGV
Sbjct: 522 KPFFSARYGGAVERMSLDELEQGKQWLNDTFFLVRCENESLPSINWVLDLAKAAVLRHGV 581

Query: 187 SGLLTRSLMII-----CDRTETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAP 246
           SGL+      +      ++TETEYVSQMLTKVKRFAQHH+CHVWFVAHPRQLQNWSGGAP
Sbjct: 582 SGLVIDPYNELDHQRPSNQTETEYVSQMLTKVKRFAQHHACHVWFVAHPRQLQNWSGGAP 641

Query: 247 NMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYNSV 302
           NMYDISGSAHFINKCDNGIVIHRNRDPDSGP+DLLQVCVRKVRNKVAGTIGEAYLAYN V
Sbjct: 642 NMYDISGSAHFINKCDNGIVIHRNRDPDSGPIDLLQVCVRKVRNKVAGTIGEAYLAYNRV 701

[Close]

BLAST of Spg035827 vs. NCBI nr
Match: KAG7019451.1 (Twinkle-like protein, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 541.6 bits (1394), Expect = 5.6e-150
Identity = 257/300 (85.67%), Postives = 278/300 (92.67%), Query Frame = 0


Query: 7   KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDL 66
           +VLMYLGPEAL+EV+D AEL+PIRGLF FK+YF EID+YYHK+ GNEFGV TGWKAL+DL
Sbjct: 401 EVLMYLGPEALREVVDNAELFPIRGLFNFKNYFDEIDSYYHKKGGNEFGVPTGWKALNDL 460

Query: 67  YNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVLCSMENKVREHARKLLEKRIK 126
           YNVVPGELTIVTGIPNSGKSEWIDALLCNLN ++GWKFVLCSMEN+VREHARKLLEKRIK
Sbjct: 461 YNVVPGELTIVTGIPNSGKSEWIDALLCNLNESSGWKFVLCSMENQVREHARKLLEKRIK 520

Query: 127 KPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGV 186
           KPFF ARYGG+VERMS++ELEQGKQWLNDTFFL RCENESLPSINWVLDLAKAAVLRHGV
Sbjct: 521 KPFFSARYGGAVERMSLDELEQGKQWLNDTFFLARCENESLPSINWVLDLAKAAVLRHGV 580

Query: 187 SGLLTRSLMII-----CDRTETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAP 246
           SGL+      +       +TETEYVSQMLTKVKRFAQHH+CHVWFVAHPRQLQNWSGGAP
Sbjct: 581 SGLVIDPYNELDHQRPSSQTETEYVSQMLTKVKRFAQHHACHVWFVAHPRQLQNWSGGAP 640

Query: 247 NMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYNSV 302
           NMYDISGSAHFINKCDNGIVIHRNRDP+SGP+DL+QVCVRKVRNKVAGTIGEAYLAYN V
Sbjct: 641 NMYDISGSAHFINKCDNGIVIHRNRDPESGPIDLVQVCVRKVRNKVAGTIGEAYLAYNRV 700

[Close]

BLAST of Spg035827 vs. NCBI nr
Match: XP_022927084.1 (twinkle homolog protein, chloroplastic/mitochondrial isoform X1 [Cucurbita moschata] >KAG6583825.1 Twinkle-like protein, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 541.6 bits (1394), Expect = 5.6e-150
Identity = 257/300 (85.67%), Postives = 278/300 (92.67%), Query Frame = 0


Query: 7   KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDL 66
           +VLMYLGPEAL+EV+D AEL+PIRGLF FK+YF EID+YYHK+ GNEFGV TGWKAL+DL
Sbjct: 402 EVLMYLGPEALREVVDNAELFPIRGLFNFKNYFDEIDSYYHKKGGNEFGVPTGWKALNDL 461

Query: 67  YNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVLCSMENKVREHARKLLEKRIK 126
           YNVVPGELTIVTGIPNSGKSEWIDALLCNLN ++GWKFVLCSMEN+VREHARKLLEKRIK
Sbjct: 462 YNVVPGELTIVTGIPNSGKSEWIDALLCNLNESSGWKFVLCSMENQVREHARKLLEKRIK 521

Query: 127 KPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGV 186
           KPFF ARYGG+VERMS++ELEQGKQWLNDTFFL RCENESLPSINWVLDLAKAAVLRHGV
Sbjct: 522 KPFFSARYGGAVERMSLDELEQGKQWLNDTFFLARCENESLPSINWVLDLAKAAVLRHGV 581

Query: 187 SGLLTRSLMII-----CDRTETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAP 246
           SGL+      +       +TETEYVSQMLTKVKRFAQHH+CHVWFVAHPRQLQNWSGGAP
Sbjct: 582 SGLVIDPYNELDHQRPSSQTETEYVSQMLTKVKRFAQHHACHVWFVAHPRQLQNWSGGAP 641

Query: 247 NMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYNSV 302
           NMYDISGSAHFINKCDNGIVIHRNRDP+SGP+DL+QVCVRKVRNKVAGTIGEAYLAYN V
Sbjct: 642 NMYDISGSAHFINKCDNGIVIHRNRDPESGPIDLVQVCVRKVRNKVAGTIGEAYLAYNRV 701

[Close]

BLAST of Spg035827 vs. NCBI nr
Match: XP_023519715.1 (twinkle homolog protein, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 541.2 bits (1393), Expect = 7.3e-150
Identity = 256/300 (85.33%), Postives = 278/300 (92.67%), Query Frame = 0


Query: 7   KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDL 66
           +VLMYLGPEAL+EV+D AEL+PIRGLF FK+YF EID+YYHK+ GNEFG+ TGWKAL+DL
Sbjct: 409 EVLMYLGPEALREVVDNAELFPIRGLFNFKNYFDEIDSYYHKKGGNEFGIPTGWKALNDL 468

Query: 67  YNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVLCSMENKVREHARKLLEKRIK 126
           YNVVPGELTIVTGIPNSGKSEWIDALLCNLN ++GWKFVLCSMEN+VREHARKLLEKRIK
Sbjct: 469 YNVVPGELTIVTGIPNSGKSEWIDALLCNLNESSGWKFVLCSMENQVREHARKLLEKRIK 528

Query: 127 KPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGV 186
           KPFF ARYGG+VERMS++ELEQGKQWLNDTFFL RCENESLPSINWVLDLAKAAVLRHGV
Sbjct: 529 KPFFSARYGGAVERMSLDELEQGKQWLNDTFFLARCENESLPSINWVLDLAKAAVLRHGV 588

Query: 187 SGLLTRSLMII-----CDRTETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAP 246
           SGL+      +       +TETEYVSQMLTKVKRFAQHH+CHVWFVAHPRQLQNWSGGAP
Sbjct: 589 SGLVIDPYNELDHQRPSSQTETEYVSQMLTKVKRFAQHHACHVWFVAHPRQLQNWSGGAP 648

Query: 247 NMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYNSV 302
           NMYDISGSAHFINKCDNGIVIHRNRDP+SGP+DL+QVCVRKVRNKVAGTIGEAYLAYN V
Sbjct: 649 NMYDISGSAHFINKCDNGIVIHRNRDPESGPIDLVQVCVRKVRNKVAGTIGEAYLAYNRV 708

[Close]

BLAST of Spg035827 vs. ExPASy Swiss-Prot
Match: B5X582 (Twinkle homolog protein, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g30680 PE=1 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 4.1e-127
Identity = 214/298 (71.81%), Postives = 253/298 (84.90%), Query Frame = 0


Query: 7   KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDL 66
           +VLM  GP  LKE I +AE YPI GLF FKD+F EIDAYY +  G+E+GVSTGWK L +L
Sbjct: 388 EVLMSKGPHLLKEAILDAEPYPILGLFSFKDFFDEIDAYYDRTHGHEYGVSTGWKNLDNL 447

Query: 67  YNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVLCSMENKVREHARKLLEKRIK 126
           Y+VVPGELT+VTGIPNSGKSEWIDA+LCNLN + GWKF LCSMENKVR+HARKLLEK IK
Sbjct: 448 YSVVPGELTVVTGIPNSGKSEWIDAMLCNLNHSVGWKFALCSMENKVRDHARKLLEKHIK 507

Query: 127 KPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGV 186
           KPFF A YG SV+RMSVEE ++GK+WLNDTF+ IRCE +SLPSI+WVL+ AKAAVLR+G+
Sbjct: 508 KPFFDADYGRSVQRMSVEEKDEGKKWLNDTFYPIRCEMDSLPSIDWVLERAKAAVLRYGI 567

Query: 187 SGLLTRSLMIICD-----RTETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAP 246
            GL+      +       +TETEYVSQMLTK+KRF+QHHSCHVWFVAHP+QLQ+W GGAP
Sbjct: 568 RGLVIDPYNELDHQRTPRQTETEYVSQMLTKIKRFSQHHSCHVWFVAHPKQLQHWDGGAP 627

Query: 247 NMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYN 300
           N+YDISGSAHFINKCDNGI++HRNRD ++GP+DL+Q+ VRKVRNKVAG IG+AYL Y+
Sbjct: 628 NLYDISGSAHFINKCDNGIIVHRNRDENAGPLDLVQIGVRKVRNKVAGQIGDAYLCYD 685

[Close]

BLAST of Spg035827 vs. ExPASy TrEMBL
Match: A0A6J1KLG2 (twinkle homolog protein, chloroplastic/mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111495250 PE=4 SV=1)

HSP 1 Score: 545.0 bits (1403), Expect = 2.5e-151
Identity = 258/300 (86.00%), Postives = 280/300 (93.33%), Query Frame = 0


Query: 7   KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDL 66
           +VLMYLGPEAL+EV+D AEL+PIRGLF FK+YF +ID+YYHK+ GNEFGV TGWKAL+DL
Sbjct: 402 EVLMYLGPEALREVVDNAELFPIRGLFNFKNYFDDIDSYYHKKGGNEFGVPTGWKALNDL 461

Query: 67  YNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVLCSMENKVREHARKLLEKRIK 126
           YNVVPGELTIVTGIPNSGKSEWIDALLCNLN ++GWKFVLCSMEN+VREHARKLLEKRIK
Sbjct: 462 YNVVPGELTIVTGIPNSGKSEWIDALLCNLNESSGWKFVLCSMENQVREHARKLLEKRIK 521

Query: 127 KPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGV 186
           KPFF ARYGG+VERMS++ELEQGKQWLNDTFFL+RCENESLPSINWVLDLAKAAVLRHGV
Sbjct: 522 KPFFSARYGGAVERMSLDELEQGKQWLNDTFFLVRCENESLPSINWVLDLAKAAVLRHGV 581

Query: 187 SGLLTRSLMII-----CDRTETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAP 246
           SGL+      +      ++TETEYVSQMLTKVKRFAQHH+CHVWFVAHPRQLQNWSGGAP
Sbjct: 582 SGLVIDPYNELDHQRPSNQTETEYVSQMLTKVKRFAQHHACHVWFVAHPRQLQNWSGGAP 641

Query: 247 NMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYNSV 302
           NMYDISGSAHFINKCDNGIVIHRNRDPDSGP+DLLQVCVRKVRNKVAGTIGEAYLAYN V
Sbjct: 642 NMYDISGSAHFINKCDNGIVIHRNRDPDSGPIDLLQVCVRKVRNKVAGTIGEAYLAYNRV 701

[Close]

BLAST of Spg035827 vs. ExPASy TrEMBL
Match: A0A6J1EH06 (twinkle homolog protein, chloroplastic/mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434017 PE=4 SV=1)

HSP 1 Score: 541.6 bits (1394), Expect = 2.7e-150
Identity = 257/300 (85.67%), Postives = 278/300 (92.67%), Query Frame = 0


Query: 7   KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDL 66
           +VLMYLGPEAL+EV+D AEL+PIRGLF FK+YF EID+YYHK+ GNEFGV TGWKAL+DL
Sbjct: 402 EVLMYLGPEALREVVDNAELFPIRGLFNFKNYFDEIDSYYHKKGGNEFGVPTGWKALNDL 461

Query: 67  YNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVLCSMENKVREHARKLLEKRIK 126
           YNVVPGELTIVTGIPNSGKSEWIDALLCNLN ++GWKFVLCSMEN+VREHARKLLEKRIK
Sbjct: 462 YNVVPGELTIVTGIPNSGKSEWIDALLCNLNESSGWKFVLCSMENQVREHARKLLEKRIK 521

Query: 127 KPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGV 186
           KPFF ARYGG+VERMS++ELEQGKQWLNDTFFL RCENESLPSINWVLDLAKAAVLRHGV
Sbjct: 522 KPFFSARYGGAVERMSLDELEQGKQWLNDTFFLARCENESLPSINWVLDLAKAAVLRHGV 581

Query: 187 SGLLTRSLMII-----CDRTETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAP 246
           SGL+      +       +TETEYVSQMLTKVKRFAQHH+CHVWFVAHPRQLQNWSGGAP
Sbjct: 582 SGLVIDPYNELDHQRPSSQTETEYVSQMLTKVKRFAQHHACHVWFVAHPRQLQNWSGGAP 641

Query: 247 NMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYNSV 302
           NMYDISGSAHFINKCDNGIVIHRNRDP+SGP+DL+QVCVRKVRNKVAGTIGEAYLAYN V
Sbjct: 642 NMYDISGSAHFINKCDNGIVIHRNRDPESGPIDLVQVCVRKVRNKVAGTIGEAYLAYNRV 701

[Close]

BLAST of Spg035827 vs. ExPASy TrEMBL
Match: A0A6J1CKU2 (twinkle homolog protein, chloroplastic/mitochondrial isoform X2 OS=Momordica charantia OX=3673 GN=LOC111012535 PE=4 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 1.8e-149
Identity = 260/300 (86.67%), Postives = 274/300 (91.33%), Query Frame = 0


Query: 7   KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDL 66
           +VLMYLGPEALKEV+D AEL+PIRGLF FKDYF EIDAYY K+FGNEFG STGWK L+ L
Sbjct: 313 EVLMYLGPEALKEVVDNAELFPIRGLFSFKDYFDEIDAYYDKKFGNEFGASTGWKGLNHL 372

Query: 67  YNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVLCSMENKVREHARKLLEKRIK 126
           YNVVPGELTIVTGIPNSGKSEWIDALLCNLNA+ GWKFVLCSMENKVREHARKLLEKRIK
Sbjct: 373 YNVVPGELTIVTGIPNSGKSEWIDALLCNLNASVGWKFVLCSMENKVREHARKLLEKRIK 432

Query: 127 KPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGV 186
           KPFF ARYG SVERMS EELE GKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGV
Sbjct: 433 KPFFNARYGESVERMSTEELEIGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGV 492

Query: 187 SGLLTRSLMII-----CDRTETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAP 246
           +GL+      +      ++TETEYVSQMLTKVKRFAQHH+CHVWFVAHPRQLQNWSGGAP
Sbjct: 493 TGLVIDPYNELDHQRPPNQTETEYVSQMLTKVKRFAQHHACHVWFVAHPRQLQNWSGGAP 552

Query: 247 NMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYNSV 302
           NMYDISGSAHFINKCDNGIVIHRNRDP+SGPVDLLQVCVRKVRNKVAGTIGEA+L YN V
Sbjct: 553 NMYDISGSAHFINKCDNGIVIHRNRDPESGPVDLLQVCVRKVRNKVAGTIGEAFLEYNRV 612

[Close]

BLAST of Spg035827 vs. ExPASy TrEMBL
Match: A0A6J1CLF6 (twinkle homolog protein, chloroplastic/mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012535 PE=4 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 1.8e-149
Identity = 260/300 (86.67%), Postives = 274/300 (91.33%), Query Frame = 0


Query: 7   KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDL 66
           +VLMYLGPEALKEV+D AEL+PIRGLF FKDYF EIDAYY K+FGNEFG STGWK L+ L
Sbjct: 393 EVLMYLGPEALKEVVDNAELFPIRGLFSFKDYFDEIDAYYDKKFGNEFGASTGWKGLNHL 452

Query: 67  YNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVLCSMENKVREHARKLLEKRIK 126
           YNVVPGELTIVTGIPNSGKSEWIDALLCNLNA+ GWKFVLCSMENKVREHARKLLEKRIK
Sbjct: 453 YNVVPGELTIVTGIPNSGKSEWIDALLCNLNASVGWKFVLCSMENKVREHARKLLEKRIK 512

Query: 127 KPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGV 186
           KPFF ARYG SVERMS EELE GKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGV
Sbjct: 513 KPFFNARYGESVERMSTEELEIGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGV 572

Query: 187 SGLLTRSLMII-----CDRTETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAP 246
           +GL+      +      ++TETEYVSQMLTKVKRFAQHH+CHVWFVAHPRQLQNWSGGAP
Sbjct: 573 TGLVIDPYNELDHQRPPNQTETEYVSQMLTKVKRFAQHHACHVWFVAHPRQLQNWSGGAP 632

Query: 247 NMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYNSV 302
           NMYDISGSAHFINKCDNGIVIHRNRDP+SGPVDLLQVCVRKVRNKVAGTIGEA+L YN V
Sbjct: 633 NMYDISGSAHFINKCDNGIVIHRNRDPESGPVDLLQVCVRKVRNKVAGTIGEAFLEYNRV 692

[Close]

BLAST of Spg035827 vs. ExPASy TrEMBL
Match: A0A0A0LYM8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G541890 PE=4 SV=1)

HSP 1 Score: 529.6 bits (1363), Expect = 1.1e-146
Identity = 251/300 (83.67%), Postives = 271/300 (90.33%), Query Frame = 0


Query: 7   KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDL 66
           +VLMYLGPEALKEV+D AELYPI GLF+FKDYF EIDAYYHK+FGNEFGV TGW+ L+DL
Sbjct: 400 EVLMYLGPEALKEVVDNAELYPISGLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDL 459

Query: 67  YNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVLCSMENKVREHARKLLEKRIK 126
           YNVVPGELTIVTG+PNSGKSEWIDALLCNLNA+AGWKF LCSMENKVREH RKLLEK IK
Sbjct: 460 YNVVPGELTIVTGVPNSGKSEWIDALLCNLNASAGWKFALCSMENKVREHGRKLLEKHIK 519

Query: 127 KPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGV 186
           KPFFV RYGGSVER+S EELEQGKQWL+DTFFL+R E +SLPSI+WVLDLAKAAVLRHGV
Sbjct: 520 KPFFVGRYGGSVERLSDEELEQGKQWLDDTFFLLRSEKDSLPSISWVLDLAKAAVLRHGV 579

Query: 187 SGLLTRSL-----MIICDRTETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAP 246
           SGL+           + ++TETEYVSQMLTKVKRFAQHH CHVWFVAHPRQLQNWSG  P
Sbjct: 580 SGLVIDPYNELDHQRLPNQTETEYVSQMLTKVKRFAQHHGCHVWFVAHPRQLQNWSGSPP 639

Query: 247 NMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYNSV 302
           NMYDISGSAHFINKCDNGIVIHRNRDP+SGP+DL+QVCVRKVRNKVAGTIGEAYL YN V
Sbjct: 640 NMYDISGSAHFINKCDNGIVIHRNRDPESGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRV 699

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BLAST of Spg035827 vs. TAIR 10
Match: AT1G30680.1 (toprim domain-containing protein )

HSP 1 Score: 456.1 bits (1172), Expect = 2.9e-128
Identity = 214/298 (71.81%), Postives = 253/298 (84.90%), Query Frame = 0


Query: 7   KVLMYLGPEALKEVIDEAELYPIRGLFQFKDYFAEIDAYYHKQFGNEFGVSTGWKALSDL 66
           +VLM  GP  LKE I +AE YPI GLF FKD+F EIDAYY +  G+E+GVSTGWK L +L
Sbjct: 388 EVLMSKGPHLLKEAILDAEPYPILGLFSFKDFFDEIDAYYDRTHGHEYGVSTGWKNLDNL 447

Query: 67  YNVVPGELTIVTGIPNSGKSEWIDALLCNLNANAGWKFVLCSMENKVREHARKLLEKRIK 126
           Y+VVPGELT+VTGIPNSGKSEWIDA+LCNLN + GWKF LCSMENKVR+HARKLLEK IK
Sbjct: 448 YSVVPGELTVVTGIPNSGKSEWIDAMLCNLNHSVGWKFALCSMENKVRDHARKLLEKHIK 507

Query: 127 KPFFVARYGGSVERMSVEELEQGKQWLNDTFFLIRCENESLPSINWVLDLAKAAVLRHGV 186
           KPFF A YG SV+RMSVEE ++GK+WLNDTF+ IRCE +SLPSI+WVL+ AKAAVLR+G+
Sbjct: 508 KPFFDADYGRSVQRMSVEEKDEGKKWLNDTFYPIRCEMDSLPSIDWVLERAKAAVLRYGI 567

Query: 187 SGLLTRSLMIICD-----RTETEYVSQMLTKVKRFAQHHSCHVWFVAHPRQLQNWSGGAP 246
            GL+      +       +TETEYVSQMLTK+KRF+QHHSCHVWFVAHP+QLQ+W GGAP
Sbjct: 568 RGLVIDPYNELDHQRTPRQTETEYVSQMLTKIKRFSQHHSCHVWFVAHPKQLQHWDGGAP 627

Query: 247 NMYDISGSAHFINKCDNGIVIHRNRDPDSGPVDLLQVCVRKVRNKVAGTIGEAYLAYN 300
           N+YDISGSAHFINKCDNGI++HRNRD ++GP+DL+Q+ VRKVRNKVAG IG+AYL Y+
Sbjct: 628 NLYDISGSAHFINKCDNGIIVHRNRDENAGPLDLVQIGVRKVRNKVAGQIGDAYLCYD 685

The following BLAST results are available for this feature:

BLAST of Spg035827 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894379.1	1.2e-152	87.33	twinkle homolog protein, chloroplastic/mitochondrial [Benincasa hispida]	[more]
XP_023000969.1	5.1e-151	86.00	twinkle homolog protein, chloroplastic/mitochondrial [Cucurbita maxima]	[more]
KAG7019451.1	5.6e-150	85.67	Twinkle-like protein, chloroplastic/mitochondrial, partial [Cucurbita argyrosper...	[more]
XP_022927084.1	5.6e-150	85.67	twinkle homolog protein, chloroplastic/mitochondrial isoform X1 [Cucurbita mosch...	[more]
XP_023519715.1	7.3e-150	85.33	twinkle homolog protein, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo...	[more]

BLAST of Spg035827 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B5X582	4.1e-127	71.81	Twinkle homolog protein, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=...	[more]

BLAST of Spg035827 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KLG2	2.5e-151	86.00	twinkle homolog protein, chloroplastic/mitochondrial OS=Cucurbita maxima OX=3661...	[more]
A0A6J1EH06	2.7e-150	85.67	twinkle homolog protein, chloroplastic/mitochondrial isoform X1 OS=Cucurbita mos...	[more]
A0A6J1CKU2	1.8e-149	86.67	twinkle homolog protein, chloroplastic/mitochondrial isoform X2 OS=Momordica cha...	[more]
A0A6J1CLF6	1.8e-149	86.67	twinkle homolog protein, chloroplastic/mitochondrial isoform X1 OS=Momordica cha...	[more]
A0A0A0LYM8	1.1e-146	83.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G541890 PE=4 SV=1	[more]

BLAST of Spg035827 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G30680.1	2.9e-128	71.81	toprim domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 34..302 e-value: 8.2E-40 score: 138.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 55..294
IPR007694	DNA helicase, DnaB-like, C-terminal	PFAM	PF03796	DnaB_C	coord: 55..291 e-value: 5.0E-7 score: 29.3
IPR007694	DNA helicase, DnaB-like, C-terminal	PROSITE	PS51199	SF4_HELICASE	coord: 49..312 score: 36.767937
IPR027032	Twinkle-like protein	PANTHER	PTHR12873	T7-LIKE MITOCHONDRIAL DNA HELICASE	coord: 7..304
None	No IPR available	PANTHER	PTHR12873:SF0	TWINKLE PROTEIN, MITOCHONDRIAL	coord: 7..304

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg035827.1	Spg035827.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032508	DNA duplex unwinding
biological_process	GO:0006260	DNA replication
molecular_function	GO:0043139	5'-3' DNA helicase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0003678	DNA helicase activity