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Spg035826 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTACTACAACCGTCTGCCGCTGCCGCTTGGAAACCAAAAGTCTAGTTGGTTGCTTGGGTCGTCTCTCGCTTACCATAGTCATCCCCCGTCAATGGAACGAACGTAAGATTCCTAGATCTAAGAATAATTCCTAAATCACAAATCCAGGTTAGTGGGAAAGGCATTTTTACGGTGAAAAGTGCTTATAACCAGGCCGTTAACATTGGTGCTAAGGAAAAGCTACTTCTTCGAATTGTGAATGATCCGAAGCCATGTGGAAAGCTCTTTGGAACCTTAATATTTATCCTAGAGCTAAAATCACATTGTGGAAGATAATTAACAATGCTCTCCCAACGAATCTTAACATATCTAAAAGAGGGATTAATTCTAATTTGAGGTGTTTTTTGTGCAGGGGAGGCGTGGAGTCAACCGAGCACCTTTTTTGGGTTGTAAGGTATCTAAAAAAGTTTGGAGAGATTTTCTGCCCAACTCATGGAGGCTCTTTCCGTGTAACAGGGACAATTGGAGTGCTATGGATTATTGGAGTTTCATGTGGAAAAAGATGAGTAAAGAGGAGCTCAGTAAAGCTGCCATTCTTATGTGGACTCTTTGGAATTCAAGAAACAGATGTAGAATTAACAACCAACAGCCAGATTCCAATCAGATTGCAAGATCGCTAGCAAATTTCTTCGAGGATTTCGATAAAGTGAATAGACCGTACCTGGAGCCATCCAGTTTGAAGAGCCAGTCGAGTCACCCTTTATGGAGGCCGCCGGACCGTGGATGGTGGAAGCTCAACTCCGATGCCGCCTGGAGCAATTCCGCAAGGAGAGGAGGCGTGGGATGGGTGCTTTGCGACTCCACCGGATCTTTAGTTGGAGCAGGTTGCAGCCGAATTACCCGGAGCTGGCCAATCAAGGCCCTTGAAGGCGAAGCTATTCGCGTTGGCTTGAGCGCGTTTCTCCGTGGGACGAGTGAAGGCCACCTCAGACCTCCGTTAAAGGTCGAATCAGATGCCCTCAGTGTCGGGAAAGTGTTAGCGGGAGAGGAAGAAGATCTTTCGGAATCAGGCCTGATCTTCACTGAGATTTTAGAGATGTCTAGGGGAGAAAGAATCGATTTTGAGTTCTGTAGTAGAAGTACCAATGTTTTGGGCCATCAGCTTGCGCATGTAGCAACTGAATGGGGGGATTTTTCTGTGTTTTTTTGCTCTTCTTCCCCTGTTCTGGAAGATAGAGAGGTTGGTTGGGATGAGAGTATCCCTCATTGGTTTGTTTCTTTATTATCTGTGGACGTTGGTAGTTGA ATGTTACTACAACCGTCTGCCGCTGCCGCTTGGAAACCAAAAGTTAGTGGGAAAGGCATTTTTACGGTGAAAAGTGCTTATAACCAGGCCGTTAACATTGGTGCTAAGGAAAAGCTACTTCTTCGAATTGTGAATGATCCGAAGCCATGGGAGGCGTGGAGTCAACCGAGCACCTTTTTTGGGTTGGACAATTGGAGTGCTATGGATTATTGGAGTTTCATGTGGAAAAAGATGAGTAAAGAGGAGCTCAGTAAAGCTGCCATTCTTATGTGGACTCTTTGGAATTCAAGAAACAGATGTAGAATTAACAACCAACAGCCAGATTCCAATCAGATTGCAAGATCGCTAGCAAATTTCTTCGAGGATTTCGATAAAGTGAATAGACCGTACCTGGAGCCATCCAGTTTGAAGAGCCAGTCGAGTCACCCTTTATGGAGGCCGCCGGACCGTGGATGGTGGAAGCTCAACTCCGATGCCGCCTGGAGCAATTCCGCAAGGAGAGGAGGCGTGGGATGGGTGCTTTGCGACTCCACCGGATCTTTAGTTGGAGCAGGTTGCAGCCGAATTACCCGGAGCTGGCCAATCAAGGCCCTTGAAGGCGAAGCTATTCGCGTTGGCTTGAGCGCGTTTCTCCGTGGGACGAGTGAAGGCCACCTCAGACCTCCGTTAAAGGTCGAATCAGATGCCCTCAGTGTCGGGAAAGTGTTAGCGGGAGAGGAAGAAGATCTTTCGGAATCAGGCCTGATCTTCACTGAGATTTTAGAGATGTCTAGGGGAGAAAGAATCGATTTTGAGTTCTGTAGTAGAAGTACCAATGTTTTGGGCCATCAGCTTGCGCATGTAGCAACTGAATGGGGGGATTTTTCTGTGTTTTTTTGCTCTTCTTCCCCTGTTCTGGAAGATAGAGAGGTTGGTTGGGATGAGAGTATCCCTCATTGGTTTGTTTCTTTATTATCTGTGGACGTTGGTAGTTGA ATGTTACTACAACCGTCTGCCGCTGCCGCTTGGAAACCAAAAGTTAGTGGGAAAGGCATTTTTACGGTGAAAAGTGCTTATAACCAGGCCGTTAACATTGGTGCTAAGGAAAAGCTACTTCTTCGAATTGTGAATGATCCGAAGCCATGGGAGGCGTGGAGTCAACCGAGCACCTTTTTTGGGTTGGACAATTGGAGTGCTATGGATTATTGGAGTTTCATGTGGAAAAAGATGAGTAAAGAGGAGCTCAGTAAAGCTGCCATTCTTATGTGGACTCTTTGGAATTCAAGAAACAGATGTAGAATTAACAACCAACAGCCAGATTCCAATCAGATTGCAAGATCGCTAGCAAATTTCTTCGAGGATTTCGATAAAGTGAATAGACCGTACCTGGAGCCATCCAGTTTGAAGAGCCAGTCGAGTCACCCTTTATGGAGGCCGCCGGACCGTGGATGGTGGAAGCTCAACTCCGATGCCGCCTGGAGCAATTCCGCAAGGAGAGGAGGCGTGGGATGGGTGCTTTGCGACTCCACCGGATCTTTAGTTGGAGCAGGTTGCAGCCGAATTACCCGGAGCTGGCCAATCAAGGCCCTTGAAGGCGAAGCTATTCGCGTTGGCTTGAGCGCGTTTCTCCGTGGGACGAGTGAAGGCCACCTCAGACCTCCGTTAAAGGTCGAATCAGATGCCCTCAGTGTCGGGAAAGTGTTAGCGGGAGAGGAAGAAGATCTTTCGGAATCAGGCCTGATCTTCACTGAGATTTTAGAGATGTCTAGGGGAGAAAGAATCGATTTTGAGTTCTGTAGTAGAAGTACCAATGTTTTGGGCCATCAGCTTGCGCATGTAGCAACTGAATGGGGGGATTTTTCTGTGTTTTTTTGCTCTTCTTCCCCTGTTCTGGAAGATAGAGAGGTTGGTTGGGATGAGAGTATCCCTCATTGGTTTGTTTCTTTATTATCTGTGGACGTTGGTAGTTGA MLLQPSAAAAWKPKVSGKGIFTVKSAYNQAVNIGAKEKLLLRIVNDPKPWEAWSQPSTFFGLDNWSAMDYWSFMWKKMSKEELSKAAILMWTLWNSRNRCRINNQQPDSNQIARSLANFFEDFDKVNRPYLEPSSLKSQSSHPLWRPPDRGWWKLNSDAAWSNSARRGGVGWVLCDSTGSLVGAGCSRITRSWPIKALEGEAIRVGLSAFLRGTSEGHLRPPLKVESDALSVGKVLAGEEEDLSESGLIFTEILEMSRGERIDFEFCSRSTNVLGHQLAHVATEWGDFSVFFCSSSPVLEDREVGWDESIPHWFVSLLSVDVGS Homology
BLAST of Spg035826 vs. NCBI nr
Match: XP_022155262.1 (uncharacterized protein LOC111022403 [Momordica charantia]) HSP 1 Score: 101.7 bits (252), Expect = 1.2e-17 Identity = 75/245 (30.61%), Postives = 112/245 (45.71%), Query Frame = 0
BLAST of Spg035826 vs. NCBI nr
Match: XP_022143317.1 (uncharacterized protein LOC111013216 [Momordica charantia]) HSP 1 Score: 99.8 bits (247), Expect = 4.7e-17 Identity = 62/193 (32.12%), Postives = 94/193 (48.70%), Query Frame = 0
BLAST of Spg035826 vs. NCBI nr
Match: XP_015388122.1 (uncharacterized protein LOC107178012 [Citrus sinensis] >XP_024041306.1 uncharacterized protein LOC112098894 [Citrus clementina]) HSP 1 Score: 98.2 bits (243), Expect = 1.4e-16 Identity = 66/244 (27.05%), Postives = 117/244 (47.95%), Query Frame = 0
BLAST of Spg035826 vs. NCBI nr
Match: XP_006487889.1 (uncharacterized protein LOC102617714 [Citrus sinensis]) HSP 1 Score: 97.8 bits (242), Expect = 1.8e-16 Identity = 76/301 (25.25%), Postives = 138/301 (45.85%), Query Frame = 0
BLAST of Spg035826 vs. NCBI nr
Match: XP_021838584.1 (uncharacterized protein LOC110778326 [Spinacia oleracea]) HSP 1 Score: 97.4 bits (241), Expect = 2.3e-16 Identity = 64/249 (25.70%), Postives = 113/249 (45.38%), Query Frame = 0
BLAST of Spg035826 vs. ExPASy TrEMBL
Match: A0A6J1DNV9 (uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022403 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 6.0e-18 Identity = 75/245 (30.61%), Postives = 112/245 (45.71%), Query Frame = 0
BLAST of Spg035826 vs. ExPASy TrEMBL
Match: A0A6J1CQG0 (uncharacterized protein LOC111013216 OS=Momordica charantia OX=3673 GN=LOC111013216 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 2.3e-17 Identity = 62/193 (32.12%), Postives = 94/193 (48.70%), Query Frame = 0
BLAST of Spg035826 vs. ExPASy TrEMBL
Match: A0A6J1CP26 (uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013412 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 6.2e-15 Identity = 63/217 (29.03%), Postives = 98/217 (45.16%), Query Frame = 0
BLAST of Spg035826 vs. ExPASy TrEMBL
Match: A0A1R3GIN3 (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_25630 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 4.0e-14 Identity = 69/247 (27.94%), Postives = 109/247 (44.13%), Query Frame = 0
BLAST of Spg035826 vs. ExPASy TrEMBL
Match: A0A6J1DL64 (uncharacterized protein LOC111022134 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022134 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.2e-13 Identity = 55/187 (29.41%), Postives = 87/187 (46.52%), Query Frame = 0
BLAST of Spg035826 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 67.4 bits (163), Expect = 2.4e-11 Identity = 51/212 (24.06%), Postives = 91/212 (42.92%), Query Frame = 0
BLAST of Spg035826 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 63.5 bits (153), Expect = 3.5e-10 Identity = 57/220 (25.91%), Postives = 92/220 (41.82%), Query Frame = 0
BLAST of Spg035826 vs. TAIR 10
Match: AT1G27870.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 48.1 bits (113), Expect = 1.5e-05 Identity = 23/75 (30.67%), Postives = 42/75 (56.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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