Spg035627 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg035627
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold3: 2616418 .. 2618450 (+)
RNA-Seq Expression	Spg035627
Synteny	Spg035627

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGTTGCTGGACGAAAACAGTGCAAGAGAGGGGAGAAATTCGAGGATTCGCAAAGCGTCGAAGAAGGCTACTATACGCGGCCAAAATGCAAGGAGAGTGAGAGGAAACCGACGTTGGTTTGAGGAAGAGGGCGTTGGCATCGTGGGTCTCTTGCTGCTCGGACCAAAGACAAAGGAGAACGAGAAAAAGGAAGAGATGCACGCAACTGCAACGAAGAAACGAGTTCGACGACGCAGAGAGAATGAGGAGTTCCCGCTGCTTGAACACGGGGAAGAAAATGAAGAGAGATCGCATCGCGGATCTAGGGGTTTCGGTGCAGAAATGAAAGGGAGACAAACGGAGAGGAAAAAAAACGCAAAGAGGGAAATGGAGGGAAAGAATATGAGTTAGGGTTCGCAATTATGCAATTACTTTTTAATCTTAGGGTTCGCAATTATGCAATTTGAAAAAAAAAATACATTTAAAAAAAATTTGGGAAATCACGGTCATATGAAACAAATTGGAGAAAACAGGCACTTTTTTTGTCTTTATATGAATCTGTGGGTTGAAGCTACGGATTCGAGGGTTGAAGGATTCAAATTTGACCAATCAACCCTTGAATCCGTGGCTTCAACCCACGGATTTGTATAAAGACAAAAAAAGTGCTTGTTTTCTCCAATTTTTTTTTCATATGACCGTGCTTTTGCCAATTTTTTTTAAAATGCATTTTTTTCCCAAATAACCCTCATGTTCCCGGTCGAGCAGCTGACCGGGACAAAATGCAGCATGAATTTTTTTTTCTTTCTTCCTAATTTCTTATGTTGTTTATCCAATTGTTGAAGGAGAAATTTTGACCAATCACAAATTGCCATGTCATTACATGAAATTAATGACAAAATTATAATTAATTAAATTTGGGACCAATTATTAATTGACATGTGTCCCAAATTTAATTTGAAGACAAAGTTGGCCAATTATAAATTTATAGAGCCAAATTTCTATTTGATCAATTAATTAAAATTAAATTATTTTTTTATCAAATTAATTAATTTGACCAATTGATTAAAAAAATAATTATTTGGATCAAATTTGGGTCTTTTAAATATTTGGGTCATATGGTTTTGGGTCAAATATGAACCAGACTCAAGACTAAATAGTTAAGCTCAAAACCAATAAAGTCCAAGCCCAAGTTATTGGCCCAAAAGTCACCAGGGTCCATCCAGCGAGAACTCTATAAATAGAGGGGTTCTCTTCCATTTCAGGGGATCAGAATTTTGAAGCTCCAAGCCAGAGAGTCAGAGAATTCAGAGAAACTCTATCAAGATTGAAGACTGAAGACTCCCTGAAATCCAGTTTCAAAGTGTTGAACACTTCTTGAAGACTGAAGACTCCTTCAAGACTGGAAGACTTCAAGCTCCAAGAATCCATTGAAGCTTCAGACTCGAGATCAAGCGTTCCAGCCCTCGAGTGAAACATATCCACACACAAGAGAGAGAATCAGAGGATTAACATTAGAGATTGTACATCCACACGCATACAAACATTAATACAAATATACATTTTATTCCACGTGTTCCATCTTCGAAGTTACGTGTGAACAAATTGGCACACCCAGTGGGACAATCTCTACCTCTCATCTCTTTCTCTTGTTTAAAGATCCAACCAACGTGATGTCACCAAAGAAAGCTCCCGCGAAGGTTATAACATCGAGCGACTCTTATACGGGTCCTGTCACTCGTAGTCGTTCCCAAGGAATAAAGATCAAGGAGGATCACACTCCTCTCGTTGTTGCAAGTAGGATCTCAAAATTGATTGAAGAATCTTCTAAAGACAAGCTTGCAATCAAAGACAACCCATTGTTCGAATCTGTTGTTCCAACGTCTGAGTAGCCAAAGGACACACTAAATCCTCATGTGATGTCTGTCATGATGGCTAATGTAGACCAGGATGAAAGAATGGCGGAGATGGAAAGAAAACTCAATCTCTTAATGAAGGTAGTTGATGAAAGAGATCTTGAGATTGCCTATTTGAAGAACCAGCTGCAAAACTGA

mRNA sequence

ATGCAGTTGCTGGACGAAAACAGTGCAAGAGAGGGGAGAAATTCGAGGATTCGCAAAGCGTCGAAGAAGGCTACTATACGCGGCCAAAATGCAAGGAGAGTGAGAGGAAACCGACGTTGGTTTGAGGAAGAGGGCGTTGGCATCGTGGGTCTCTTGCTGCTCGGACCAAAGACAAAGGAGAACGAGAAAAAGGAAGAGATGCACGCAACTGCAACGAAGAAACGAGTTCGACGACGCAGAGAGAATGAGGAGTTCCCGCTGCTTGAACACGGGGAAGAAAATGAAGAGAGATCGCATCGCGGATCTAGGGGTTTCGGTGCAGAAATGAAAGGGAGACAAACGGAGAGGAAAAAAAACGCAAAGAGGGAAATGGAGGGAAAGAATATGAGGGATCAGAATTTTGAAGCTCCAAGCCAGAGAGTCAGAGAATTCAGAGAAACTCTATCAAGATTGAAGACTGAAGACTCCCTGAAATCCAACCAGGATGAAAGAATGGCGGAGATGGAAAGAAAACTCAATCTCTTAATGAAGGTAGTTGATGAAAGAGATCTTGAGATTGCCTATTTGAAGAACCAGCTGCAAAACTGA

Coding sequence (CDS)

ATGCAGTTGCTGGACGAAAACAGTGCAAGAGAGGGGAGAAATTCGAGGATTCGCAAAGCGTCGAAGAAGGCTACTATACGCGGCCAAAATGCAAGGAGAGTGAGAGGAAACCGACGTTGGTTTGAGGAAGAGGGCGTTGGCATCGTGGGTCTCTTGCTGCTCGGACCAAAGACAAAGGAGAACGAGAAAAAGGAAGAGATGCACGCAACTGCAACGAAGAAACGAGTTCGACGACGCAGAGAGAATGAGGAGTTCCCGCTGCTTGAACACGGGGAAGAAAATGAAGAGAGATCGCATCGCGGATCTAGGGGTTTCGGTGCAGAAATGAAAGGGAGACAAACGGAGAGGAAAAAAAACGCAAAGAGGGAAATGGAGGGAAAGAATATGAGGGATCAGAATTTTGAAGCTCCAAGCCAGAGAGTCAGAGAATTCAGAGAAACTCTATCAAGATTGAAGACTGAAGACTCCCTGAAATCCAACCAGGATGAAAGAATGGCGGAGATGGAAAGAAAACTCAATCTCTTAATGAAGGTAGTTGATGAAAGAGATCTTGAGATTGCCTATTTGAAGAACCAGCTGCAAAACTGA

Protein sequence

MQLLDENSAREGRNSRIRKASKKATIRGQNARRVRGNRRWFEEEGVGIVGLLLLGPKTKENEKKEEMHATATKKRVRRRRENEEFPLLEHGEENEERSHRGSRGFGAEMKGRQTERKKNAKREMEGKNMRDQNFEAPSQRVREFRETLSRLKTEDSLKSNQDERMAEMERKLNLLMKVVDERDLEIAYLKNQLQN

Homology

The following BLAST results are available for this feature:

BLAST of Spg035627 vs.


Match Name	E-value	Identity	Description

BLAST of Spg035627 vs.


Match Name	E-value	Identity	Description

BLAST of Spg035627 vs.


Match Name	E-value	Identity	Description

BLAST of Spg035627 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 158..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg035627.1	Spg035627.1	mRNA