Spg035444 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAGGAGTGTGGAAATTCTGCCGAGGGATAACCATTGATAACATCGGGGACAATCTTTTCCTAATTAACCCTCAATCAGAACAGGGAAGAGACAAAATATTGGAAGAAAGCCCGTGGTGTTTCGATGGCAACTTGATACTCCTCAAAGCTCCAACGACATTTGACTTACCAGAAGATATGGTATTTGAAGAAGCCCAATTCTGGGTTCAATTTCACCACCTCCCGTTGGGACTACAGAACGAAACAGTGGCTCAATCACTTGGGAGTCGTTTAGGGATAGTTCAGAGAGTTGACACTAATGAAGCGGATGAATGCTGGGGTCGGTTCCTTCGAGTACGGGTCAAAATGAAGATCAAAGAACCATTATGCAGAGGCCTAACTCTAAACGGCGGACCAACTGGAAAAATTTTGGCAGTGATTAAATATGAGAGACTACCAGATTTTTGTTACTACTGTGGGATGATTGATCACAACGACGGATCGTGCCCCCAACTCAAGACTCAAGCAAAACCAGAAAAGCAATTCGGTTCTTGGATGAGAGCTGCAACTCCCCCGAGACAAAAATATTTTCACACAAATAACAGAGGATACGAGGGAATTAGAGGAGGAAGAAGACGGTTCGGGTACAGACAAAGAAGATGGCAACCATGGCAATCCAACGCAGGGGAGGAAGAAGAAGAAAACATACATGGAGATTCAGAGGACTCCCAAAGCTCCGACGAAAGCGGTGACGAACGGCAGCCGGAAAACAACCGTCGATCGCCTACTACACCCGTTTCCGATGAATTCTCCCCGCAATCAATGCAATCGACGGAGATAACGGGTATTAAATGTCCCCTTTCCTTTGATAACGCTTCTCTTGCGGAGAATTTCCCTTTTAATGCAGGCGGCGTGATTCACGGCAACGCGAATGGAGAAAATAATGGCTCCTCCGGTTTGGAAGGTCTGAAATCTTGCGAATCAAATATGGGCAAAGGGAAGAGAAGAAACGGCTGCTGTGAGGATCTAGGGCAAGGAAACTCAGTGGGGGAAAAAAGAGTTGGTGGGCCCGGGTCCATTAACATGACCCAACCTACTACCCAGATGATGGATGTCACGCTGGTAAATAATTTGGGCATCAAACCCAACTCAAGCTTCACAAAAATTCAGGCCAAATGA ATGAGAGGAGTGTGGAAATTCTGCCGAGGGATAACCATTGATAACATCGGGGACAATCTTTTCCTAATTAACCCTCAATCAGAACAGGGAAGAGACAAAATATTGGAAGAAAGCCCGTGGTGTTTCGATGGCAACTTGATACTCCTCAAAGCTCCAACGACATTTGACTTACCAGAAGATATGGTATTTGAAGAAGCCCAATTCTGGGTTCAATTTCACCACCTCCCGTTGGGACTACAGAACGAAACAGTGGCTCAATCACTTGGGAGTCGTTTAGGGATAGTTCAGAGAGTTGACACTAATGAAGCGGATGAATGCTGGGGTCGGTTCCTTCGAGTACGGGTCAAAATGAAGATCAAAGAACCATTATGCAGAGGCCTAACTCTAAACGGCGGACCAACTGGAAAAATTTTGGCAGTGATTAAATATGAGAGACTACCAGATTTTTGTTACTACTGTGGGATGATTGATCACAACGACGGATCGTGCCCCCAACTCAAGACTCAAGCAAAACCAGAAAAGCAATTCGGTTCTTGGATGAGAGCTGCAACTCCCCCGAGACAAAAATATTTTCACACAAATAACAGAGGATACGAGGGAATTAGAGGAGGAAGAAGACGGTTCGGGTACAGACAAAGAAGATGGCAACCATGGCAATCCAACGCAGGGGAGGAAGAAGAAGAAAACATACATGGAGATTCAGAGGACTCCCAAAGCTCCGACGAAAGCGGTGACGAACGGCAGCCGGAAAACAACCGTCGATCGCCTACTACACCCGTTTCCGATGAATTCTCCCCGCAATCAATGCAATCGACGGAGATAACGGGTATTAAATGTCCCCTTTCCTTTGATAACGCTTCTCTTGCGGAGAATTTCCCTTTTAATGCAGGCGGCGTGATTCACGGCAACGCGAATGGAGAAAATAATGGCTCCTCCGGTTTGGAAGGTCTGAAATCTTGCGAATCAAATATGGGCAAAGGGAAGAGAAGAAACGGCTGCTGTGAGGATCTAGGGCAAGGAAACTCAGTGGGGGAAAAAAGAGTTGGTGGGCCCGGGTCCATTAACATGACCCAACCTACTACCCAGATGATGGATGTCACGCTGGTAAATAATTTGGGCATCAAACCCAACTCAAGCTTCACAAAAATTCAGGCCAAATGA ATGAGAGGAGTGTGGAAATTCTGCCGAGGGATAACCATTGATAACATCGGGGACAATCTTTTCCTAATTAACCCTCAATCAGAACAGGGAAGAGACAAAATATTGGAAGAAAGCCCGTGGTGTTTCGATGGCAACTTGATACTCCTCAAAGCTCCAACGACATTTGACTTACCAGAAGATATGGTATTTGAAGAAGCCCAATTCTGGGTTCAATTTCACCACCTCCCGTTGGGACTACAGAACGAAACAGTGGCTCAATCACTTGGGAGTCGTTTAGGGATAGTTCAGAGAGTTGACACTAATGAAGCGGATGAATGCTGGGGTCGGTTCCTTCGAGTACGGGTCAAAATGAAGATCAAAGAACCATTATGCAGAGGCCTAACTCTAAACGGCGGACCAACTGGAAAAATTTTGGCAGTGATTAAATATGAGAGACTACCAGATTTTTGTTACTACTGTGGGATGATTGATCACAACGACGGATCGTGCCCCCAACTCAAGACTCAAGCAAAACCAGAAAAGCAATTCGGTTCTTGGATGAGAGCTGCAACTCCCCCGAGACAAAAATATTTTCACACAAATAACAGAGGATACGAGGGAATTAGAGGAGGAAGAAGACGGTTCGGGTACAGACAAAGAAGATGGCAACCATGGCAATCCAACGCAGGGGAGGAAGAAGAAGAAAACATACATGGAGATTCAGAGGACTCCCAAAGCTCCGACGAAAGCGGTGACGAACGGCAGCCGGAAAACAACCGTCGATCGCCTACTACACCCGTTTCCGATGAATTCTCCCCGCAATCAATGCAATCGACGGAGATAACGGGTATTAAATGTCCCCTTTCCTTTGATAACGCTTCTCTTGCGGAGAATTTCCCTTTTAATGCAGGCGGCGTGATTCACGGCAACGCGAATGGAGAAAATAATGGCTCCTCCGGTTTGGAAGGTCTGAAATCTTGCGAATCAAATATGGGCAAAGGGAAGAGAAGAAACGGCTGCTGTGAGGATCTAGGGCAAGGAAACTCAGTGGGGGAAAAAAGAGTTGGTGGGCCCGGGTCCATTAACATGACCCAACCTACTACCCAGATGATGGATGTCACGCTGGTAAATAATTTGGGCATCAAACCCAACTCAAGCTTCACAAAAATTCAGGCCAAATGA MRGVWKFCRGITIDNIGDNLFLINPQSEQGRDKILEESPWCFDGNLILLKAPTTFDLPEDMVFEEAQFWVQFHHLPLGLQNETVAQSLGSRLGIVQRVDTNEADECWGRFLRVRVKMKIKEPLCRGLTLNGGPTGKILAVIKYERLPDFCYYCGMIDHNDGSCPQLKTQAKPEKQFGSWMRAATPPRQKYFHTNNRGYEGIRGGRRRFGYRQRRWQPWQSNAGEEEEENIHGDSEDSQSSDESGDERQPENNRRSPTTPVSDEFSPQSMQSTEITGIKCPLSFDNASLAENFPFNAGGVIHGNANGENNGSSGLEGLKSCESNMGKGKRRNGCCEDLGQGNSVGEKRVGGPGSINMTQPTTQMMDVTLVNNLGIKPNSSFTKIQAK Homology
BLAST of Spg035444 vs. NCBI nr
Match: OMO61345.1 (reverse transcriptase [Corchorus capsularis]) HSP 1 Score: 167.2 bits (422), Expect = 2.9e-37 Identity = 75/209 (35.89%), Postives = 118/209 (56.46%), Query Frame = 0
BLAST of Spg035444 vs. NCBI nr
Match: XP_023888198.1 (uncharacterized protein LOC112000324 [Quercus suber]) HSP 1 Score: 161.8 bits (408), Expect = 1.2e-35 Identity = 74/199 (37.19%), Postives = 117/199 (58.79%), Query Frame = 0
BLAST of Spg035444 vs. NCBI nr
Match: XP_030930480.1 (uncharacterized protein LOC115956164 [Quercus lobata]) HSP 1 Score: 161.4 bits (407), Expect = 1.6e-35 Identity = 84/227 (37.00%), Postives = 117/227 (51.54%), Query Frame = 0
BLAST of Spg035444 vs. NCBI nr
Match: XP_023915780.1 (uncharacterized protein At4g02000-like [Quercus suber]) HSP 1 Score: 161.4 bits (407), Expect = 1.6e-35 Identity = 70/186 (37.63%), Postives = 111/186 (59.68%), Query Frame = 0
BLAST of Spg035444 vs. NCBI nr
Match: XP_023926510.1 (uncharacterized protein LOC112037926 [Quercus suber]) HSP 1 Score: 160.6 bits (405), Expect = 2.7e-35 Identity = 76/200 (38.00%), Postives = 118/200 (59.00%), Query Frame = 0
BLAST of Spg035444 vs. ExPASy TrEMBL
Match: A0A1R3GTB5 (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_23588 PE=4 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 1.4e-37 Identity = 75/209 (35.89%), Postives = 118/209 (56.46%), Query Frame = 0
BLAST of Spg035444 vs. ExPASy TrEMBL
Match: A0A1R3K847 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_10561 PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 8.4e-35 Identity = 71/208 (34.13%), Postives = 114/208 (54.81%), Query Frame = 0
BLAST of Spg035444 vs. ExPASy TrEMBL
Match: A0A2N9E949 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3389 PE=4 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 2.1e-33 Identity = 78/205 (38.05%), Postives = 113/205 (55.12%), Query Frame = 0
BLAST of Spg035444 vs. ExPASy TrEMBL
Match: A0A2N9F689 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10176 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 2.7e-33 Identity = 71/190 (37.37%), Postives = 107/190 (56.32%), Query Frame = 0
BLAST of Spg035444 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 6.0e-33 Identity = 72/180 (40.00%), Postives = 101/180 (56.11%), Query Frame = 0
BLAST of Spg035444 vs. TAIR 10
Match: AT3G31430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18636.1); Has 295 Blast hits to 291 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 71.2 bits (173), Expect = 2.0e-12 Identity = 42/136 (30.88%), Postives = 58/136 (42.65%), Query Frame = 0
BLAST of Spg035444 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding ) HSP 1 Score: 62.4 bits (150), Expect = 9.3e-10 Identity = 37/141 (26.24%), Postives = 60/141 (42.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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