Spg035438 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg035438
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold3: 825616 .. 829456 (-)
RNA-Seq Expression	Spg035438
Synteny	Spg035438

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCATCTTCGCCGCGCCGCCGTCTCAACTGAATCTCTCTTCTCGTCACCCAAGCTTGATTCGCAGAGCTATTCTTCCCTCCTCCATCGTCGGCATTCAATTTCACTCCAACGGCTTTCCAATTTCTTCTTTCAGGTATCCGTAGTTTAATCAGTCCTCTTCGATCCCTCGCATTTAGCTTCTATGATCTCAAAAGATATGGAGATTGTTATGTGTTGTATGAGTCTAATGAGCATTTTAGCAATGAAGTTCGTCTGTTACTTAGTTCTGTAAAGTGGATCTACTTTGATTCTTTTGTTGAAAATGGAATTCAGCAGGCAGTTGCTGATTCCTAACTAGTTTTGGCTACTTACGCCGATGAATTTTTATAAGTTTACATCCGACGCATTGTTGGTTTGATGCATATTTTAACAGTTCTCTATGATCCCTTGCATTAGGCATATATTATTTCAGAAGATATCGGGATTTTTACATGTTGCAATGAGCATGTTAGCATTGGAGATCATCTGTTACTTAGTTTTGTAAAGTGAATCCACTTTGATACTTTTGTTGAAAATGGAATTGGATGATAGTTGCTGCCTTGCTAGTTGCTGGTTCAAAATTGGTTTCGGTACTCTAGTATTAGGTTTTACTTTTGTGAATGTTTTGGAGTTTAAATGTAATGAACCTTTAATTTGGTACCTATTTAAGCAGTCCTCTTCGATCCCTTGCATTTGGTTTCGGCATATAGAGTTTAAGAGGATATCAGGTTTATTATATCTTGTAATGAGCATGCTAGCATTGAAGTTCATTTATAACTTAGTTATGTGAAGTGCATCCACTCTGATTCATGTGTTGAAAATGGGATTTTCCAGGTAGTTACTAAATCCCAATTGGTTTTGTTTTGCCTAGTAACGCATAGAGCTTATAATACTACTACAAATGAGACTTCATTTTTCTGATTTTTTTTCTTTACAATATATGGGTAGGGGATTTAGACCTCCGACCTCTTGGTTGAGAGTACATGTTTTATGTCAGTTAGACTATGTTCATGTTGACATTTTTATGATCTCCTTCAACGTCTAAATGGGGTGAATCTTTGATTTGATACTTATTTGGGCATTAAATGAGCATGTATAGAATTCAAAGTCTAAATGCGGGGTCTCAGTTTCTACGGCTTCCGTCTCAACTTCGGGGTCGGTGGCAAATGTAGCTTGAAAAGCTTGGAGGGCTGCCCGCTTTGGGCATTCAGACACTCGATGGCCCCCTTACATATAAAGCACACAAGGGGCCTTTGGTAGTTGTTTTGTTGGTATTGCCCTCACCCAAAATTTCCGCCTCTCTGTTGGAAGGGTCTACGATCTCCCCCTCCTTGTTTGTCTCCTCCCCCACTTTTGGGAGAGCCTGACTGAGTGTTTTTGTTTGCTCCATTAGAGGGAGACTGATCCCGCCTTACGTCTTGGGACTGGTCATTACTTGTTGGGTTTTATGTCCTAAAACTAGTAGATAGTAAATGAAACAAATTAATCGATCTCAATAAAAGTGTTATTTGAGTTATTCAGTAATTTGGTTATTGAATAATCGAGTTTGCATTAATAAACCCTAAATCCAATAAATTAAGATCCAAAGTTGTTTAAATGAAACTTGGACTAGTATGTGGGGATATACGAGGATCGGTGTCCAAGTAACAACCTAAAAGGTCTATAGTATAGAGATAAGGCTGGGTACCTTATCCTGGTGACACTATGTGATACGGCCCACCTTGTATTCGATACAGATGCAATGATCCAAAGCATCCATGTAGGAGACATGCGGGTGGGGGTATCCTATGCAATGAGTTTTCATAAGACCGGACCGCGAAATAGTAATCACTAGATGTAACGCCGTTAACTAGTTTAGGTTTCTATTTCAATAGGATGACCTAGGTAACTCAATCTCAATCCTGAGTCTGTTATGAACTCCTTTCAGGAGGAATTGTCCTTAGATTTGTATGGGTGAGAGTGGCGAGTTCACCGACTCAATAATCCTACCATTTCAGGGGCAAGACCGAATGAGGGTTGGGAACATAACAACACAAGATGGAATTCACTCCTTCCCCTATTGGGGCAAGTAGATGTGTGTTCCCTTAAAGGTTGATTCTGGGGCTTAAACAAAGGCGCGTCGCCCTCTCCTGGCCCGAGAGGAACTCTTGTTTAGTGGTTGGACCCTAAACAACTTATTCATTAGAGGGATCAGTGGTACTTAAGGAACCAGAGGTAACCTAGGGGTAAAACGGTAATTTGACCCAGCTGGTGTTACGAACACACGTGAAGGATTGACTTACTGCATTGGTCGATATCCGTGGACAAATAAATTTTCTACAGTGAGAAGAGTGCAGCTGTGGGTCTTTAGTGGAGTGACCCACAGTTAACAAATGTTGACTAACTTGGTTAATGAGTTTAGCCAATTAGTCTCGTCCACTAGTAGCTCGTAAAGACACTTGAGGCAATTAAGTATAAATTGTAAATTGAAAGTGTTCAATTTATTTAGGGGAGTCATATAGTATATTGATACATTATAATATAAAGTTTATGAAACTTTATAATATAATTTTAAATTAATTTCAAAATTAATTCTTGAGAGAAAATATTTGAAAGAGTTCAAATAATTAATATGAATTGGATTCATATTAATATAAATAATTTAATAAAATCCCTAAGATTAAATATATGATATTTAATTGGGTAATTAATTAATTATTTATTAAATTAAATATGAATAAGATAATAGATTTGATTAGATCTTATTCATGACCTTTTCCTATAAGGAAAAGGTATTGGCCTTTTTCCTATAAATAGGACCCCTGGGTGGGTTGAAAGGCATCCCATTCATTCTCCTACTCTCAGAGAATTCCGCTGAAGGCTCCCTCTAGACTCCCACTAGTCTCATGCCTCTAGAAATCTCAGAGTCATATCGGTGTAGCTCCTCAACCGAACTCGAATCATCTTGCAGCGGAACTTCGTTCAGTCATACACGTCGCCCGTACGTGTATTTTCACTCATTCGCGACTCCAGCCGACTTGCCTCTACTCTAGGCCAAGTTCTAAGGCTCAACCTTGCCTCTACATCAGGCCAAGGTCATCTGAACACAACGTCGCATCACATTTCATCGTCCTCTATCTCGAGGACACGGCCCACACGATTCTACATCGATCTGGAACTTCGCCAGGATGTGTTCGGACCCTTCAACGGGTCAAAACGGCCTTAAAACGCTCAACCGGAGCTTACCGGGTGATTTCAGCACTTACCAGGACCTACCGGGGCATTATAACGCTTACCGGGGCTTTTCAACGCCTACCGGGGCTTATCGGGCATTATAATGCTTACCGGGACATTTCGGGCAAATACCGTGCCAACCGGGAACTATCAGGTTCCACTGATGCTTCACGATGCCACCTCGAGCCTCGGGATGTCATCTGACTTAACCGCTCGCTCGGACCTGCTTCTCGAGAACCGACCCATGGGCTTTACTTATAATCGGGGCCTCCCGGACATCCATCCATCCGGGCATATCGAGGCATGAACCCTTCCGTGTCATGCCGAGTCATTTTCGTATAGCGTGCCGCAGCCCGGCCATATGGTGCAACCTCTAGCCCATGGGCGGGGGCACAATGTCGGCACACCCGTGCCGCCCGACACTGTCCTTGGAAACCCATTCCCAAAGGAAGACGCCCAAGACACTCGTCTTGCAACGCTCGCCCACGCCATGACACACGCATGTGCCATGGGGTAGCTCACTTAGGCCACAGGGCACAGGGGTGGTGGAGAGCTGACACCATGCCTCCCCCTATAGTGCATTCTGAGGCATATTTGGTCTGA

mRNA sequence

ATGGCTTCCATCTTCGCCGCGCCGCCGTCTCAACTGAATCTCTCTTCTCGTCACCCAAGCTTGATTCGCAGAGCTATTCTTCCCTCCTCCATCGTCGGCATTCAATTTCACTCCAACGGCTTTCCAATTTCTTCTTTCAGTTATGTGAAGTGCATCCACTCTGATTCATGTGTTGAAAATGGGATTTTCCAGCTTGAAAAGCTTGGAGGGCTGCCCGCTTTGGGCATTCAGACACTCGATGGCCCCCTTACATATAAAGCACACAAGGGGCCTTTGGTAGTTGTTTTGTTGAGTCATATCGGTGTAGCTCCTCAACCGAACTCGAATCATCTTGCAGCGGAACTTCGTTCAGTCATACACGTCGCCCGTACGTGTATTTTCACTCATTCGCGACTCCAGCCGACTTGCCTCTACTCTAGGCCAAGTTCTAAGGCTCAACCTTGCCTCTACATCAGGCCAAGGTCATCTGAACACAACGTCGCATCACATTTCATCGTCCTCTATCTCGAGGACACGGCCCACACGATTCTACATCGATCTGGAACTTCGCCAGGATGTGTTCGGACCCTTCAACGGGTCAAAACGGCCTTAAAACGCTCAACCGGAGCTTACCGGGTGATTTCAGCACTTACCAGGACCTACCGGGGCATTATAACGCTTACCGGGGCTTTTCAACGCCTACCGGGGCTTATCGGGCATTATAATGCTTACCGGGACATTTCGGGCAAATACCGTGCCAACCGGGAACTATCAGCCCGGCCATATGGTGCAACCTCTAGCCCATGGGCGGGGGCACAATGTCGGCACACCCGTGCCGCCCGACACTGTCCTTGGAAACCCATTCCCAAAGGAAGACGCCCAAGACACTCGTCTTGCAACGCTCGCCCACGCCATGACACACGCATGTGCCATGGGGTAGCTCACTTAGGCCACAGGGCACAGGGGTGGTGGAGAGCTGACACCATGCCTCCCCCTATAGTGCATTCTGAGGCATATTTGGTCTGA

Coding sequence (CDS)

ATGGCTTCCATCTTCGCCGCGCCGCCGTCTCAACTGAATCTCTCTTCTCGTCACCCAAGCTTGATTCGCAGAGCTATTCTTCCCTCCTCCATCGTCGGCATTCAATTTCACTCCAACGGCTTTCCAATTTCTTCTTTCAGTTATGTGAAGTGCATCCACTCTGATTCATGTGTTGAAAATGGGATTTTCCAGCTTGAAAAGCTTGGAGGGCTGCCCGCTTTGGGCATTCAGACACTCGATGGCCCCCTTACATATAAAGCACACAAGGGGCCTTTGGTAGTTGTTTTGTTGAGTCATATCGGTGTAGCTCCTCAACCGAACTCGAATCATCTTGCAGCGGAACTTCGTTCAGTCATACACGTCGCCCGTACGTGTATTTTCACTCATTCGCGACTCCAGCCGACTTGCCTCTACTCTAGGCCAAGTTCTAAGGCTCAACCTTGCCTCTACATCAGGCCAAGGTCATCTGAACACAACGTCGCATCACATTTCATCGTCCTCTATCTCGAGGACACGGCCCACACGATTCTACATCGATCTGGAACTTCGCCAGGATGTGTTCGGACCCTTCAACGGGTCAAAACGGCCTTAAAACGCTCAACCGGAGCTTACCGGGTGATTTCAGCACTTACCAGGACCTACCGGGGCATTATAACGCTTACCGGGGCTTTTCAACGCCTACCGGGGCTTATCGGGCATTATAATGCTTACCGGGACATTTCGGGCAAATACCGTGCCAACCGGGAACTATCAGCCCGGCCATATGGTGCAACCTCTAGCCCATGGGCGGGGGCACAATGTCGGCACACCCGTGCCGCCCGACACTGTCCTTGGAAACCCATTCCCAAAGGAAGACGCCCAAGACACTCGTCTTGCAACGCTCGCCCACGCCATGACACACGCATGTGCCATGGGGTAGCTCACTTAGGCCACAGGGCACAGGGGTGGTGGAGAGCTGACACCATGCCTCCCCCTATAGTGCATTCTGAGGCATATTTGGTCTGA

Protein sequence

MASIFAAPPSQLNLSSRHPSLIRRAILPSSIVGIQFHSNGFPISSFSYVKCIHSDSCVENGIFQLEKLGGLPALGIQTLDGPLTYKAHKGPLVVVLLSHIGVAPQPNSNHLAAELRSVIHVARTCIFTHSRLQPTCLYSRPSSKAQPCLYIRPRSSEHNVASHFIVLYLEDTAHTILHRSGTSPGCVRTLQRVKTALKRSTGAYRVISALTRTYRGIITLTGAFQRLPGLIGHYNAYRDISGKYRANRELSARPYGATSSPWAGAQCRHTRAARHCPWKPIPKGRRPRHSSCNARPRHDTRMCHGVAHLGHRAQGWWRADTMPPPIVHSEAYLV

Homology

[Close]

BLAST of Spg035438 vs. NCBI nr
Match: XP_022991945.1 (uncharacterized protein LOC111488436 [Cucurbita maxima])

HSP 1 Score: 71.6 bits (174), Expect = 1.4e-08
Identity = 37/48 (77.08%), Postives = 41/48 (85.42%), Query Frame = 0


Query: 1  MASIFAAPPSQLNLSSRHPSLIRRAILPSSIVGIQFHSNGFPISSFSY 49
          MASIFAAPPS+LNL+SR PSLI  A+LPSSI GIQ+HSN FPI SF Y
Sbjct: 1  MASIFAAPPSRLNLTSR-PSLIHGAVLPSSIAGIQYHSNAFPIPSFRY 47

[Close]

BLAST of Spg035438 vs. NCBI nr
Match: XP_023547947.1 (uncharacterized protein LOC111806743 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 71.6 bits (174), Expect = 1.4e-08
Identity = 37/48 (77.08%), Postives = 41/48 (85.42%), Query Frame = 0


Query: 1  MASIFAAPPSQLNLSSRHPSLIRRAILPSSIVGIQFHSNGFPISSFSY 49
          MASIFAAPPS+LNL+SR PSLI  A+LPSS  GIQ+HSN FPI SFSY
Sbjct: 1  MASIFAAPPSRLNLTSR-PSLIHGAVLPSSTAGIQYHSNAFPIPSFSY 47

[Close]

BLAST of Spg035438 vs. NCBI nr
Match: KAG6575660.1 (hypothetical protein SDJN03_26299, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014210.1 hypothetical protein SDJN02_24385 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 71.6 bits (174), Expect = 1.4e-08
Identity = 37/48 (77.08%), Postives = 41/48 (85.42%), Query Frame = 0


Query: 1  MASIFAAPPSQLNLSSRHPSLIRRAILPSSIVGIQFHSNGFPISSFSY 49
          MASIFAAPPS+LNL+SR PSLI  A+LPSSI GIQ+HSN FPI SF Y
Sbjct: 1  MASIFAAPPSRLNLTSR-PSLIHGAVLPSSIAGIQYHSNAFPIPSFRY 47

[Close]

BLAST of Spg035438 vs. NCBI nr
Match: XP_022953425.1 (uncharacterized protein LOC111455984 [Cucurbita moschata])

HSP 1 Score: 70.5 bits (171), Expect = 3.2e-08
Identity = 36/48 (75.00%), Postives = 41/48 (85.42%), Query Frame = 0


Query: 1  MASIFAAPPSQLNLSSRHPSLIRRAILPSSIVGIQFHSNGFPISSFSY 49
          MASIF+APPS+LNL+SR PSLI  A+LPSSI GIQ+HSN FPI SF Y
Sbjct: 1  MASIFSAPPSRLNLTSR-PSLIHGAVLPSSIAGIQYHSNAFPIPSFRY 47

[Close]

BLAST of Spg035438 vs. NCBI nr
Match: KAG7025683.1 (hypothetical protein SDJN02_12181 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 66.2 bits (160), Expect = 6.0e-07
Identity = 33/48 (68.75%), Postives = 39/48 (81.25%), Query Frame = 0


Query: 1  MASIFAAPPSQLNLSSRHPSLIRRAILPSSIVGIQFHSNGFPISSFSY 49
          MAS+FAAPPSQ++LSS  PSL  +A LP SIVG++FH NGFPI SF Y
Sbjct: 1  MASVFAAPPSQVDLSSHRPSLDHKAFLP-SIVGVKFHRNGFPIPSFRY 47

[Close]

BLAST of Spg035438 vs. ExPASy TrEMBL
Match: A0A6J1JUC2 (uncharacterized protein LOC111488436 OS=Cucurbita maxima OX=3661 GN=LOC111488436 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 6.9e-09
Identity = 37/48 (77.08%), Postives = 41/48 (85.42%), Query Frame = 0


Query: 1  MASIFAAPPSQLNLSSRHPSLIRRAILPSSIVGIQFHSNGFPISSFSY 49
          MASIFAAPPS+LNL+SR PSLI  A+LPSSI GIQ+HSN FPI SF Y
Sbjct: 1  MASIFAAPPSRLNLTSR-PSLIHGAVLPSSIAGIQYHSNAFPIPSFRY 47

[Close]

BLAST of Spg035438 vs. ExPASy TrEMBL
Match: A0A6J1GPL5 (uncharacterized protein LOC111455984 OS=Cucurbita moschata OX=3662 GN=LOC111455984 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.5e-08
Identity = 36/48 (75.00%), Postives = 41/48 (85.42%), Query Frame = 0


Query: 1  MASIFAAPPSQLNLSSRHPSLIRRAILPSSIVGIQFHSNGFPISSFSY 49
          MASIF+APPS+LNL+SR PSLI  A+LPSSI GIQ+HSN FPI SF Y
Sbjct: 1  MASIFSAPPSRLNLTSR-PSLIHGAVLPSSIAGIQYHSNAFPIPSFRY 47

[Close]

BLAST of Spg035438 vs. ExPASy TrEMBL
Match: A0A6J1KVQ7 (uncharacterized protein LOC111498025 OS=Cucurbita maxima OX=3661 GN=LOC111498025 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.8e-07
Identity = 34/48 (70.83%), Postives = 38/48 (79.17%), Query Frame = 0


Query: 1  MASIFAAPPSQLNLSSRHPSLIRRAILPSSIVGIQFHSNGFPISSFSY 49
          MAS+FAAPPSQL LSS  PSL  +A LP SIVG++FH NGFPI SF Y
Sbjct: 1  MASVFAAPPSQLVLSSHRPSLDHKAFLP-SIVGVKFHRNGFPIPSFRY 47

[Close]

BLAST of Spg035438 vs. ExPASy TrEMBL
Match: A0A6J1H506 (uncharacterized protein LOC111460632 OS=Cucurbita moschata OX=3662 GN=LOC111460632 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.8e-07
Identity = 34/48 (70.83%), Postives = 38/48 (79.17%), Query Frame = 0


Query: 1  MASIFAAPPSQLNLSSRHPSLIRRAILPSSIVGIQFHSNGFPISSFSY 49
          MAS+FAAPPSQL LSS  PSL  +A LP SIVG++FH NGFPI SF Y
Sbjct: 1  MASVFAAPPSQLVLSSHRPSLDHKAFLP-SIVGVKFHRNGFPIPSFRY 47

[Close]

BLAST of Spg035438 vs. ExPASy TrEMBL
Match: A0A6J1CV15 (uncharacterized protein LOC111015032 OS=Momordica charantia OX=3673 GN=LOC111015032 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.4e-06
Identity = 33/48 (68.75%), Postives = 39/48 (81.25%), Query Frame = 0


Query: 1  MASIFAAPPSQLNLSSRHPSLIRRAILPSSIVGIQFHSNGFPISSFSY 49
          MASIFAAPPSQLNL SR  S  RRA+LP SIVG++ HS+GFP+ SF +
Sbjct: 1  MASIFAAPPSQLNLCSRRSSSNRRALLP-SIVGVKLHSSGFPVPSFRF 47

The following BLAST results are available for this feature:

BLAST of Spg035438 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022991945.1	1.4e-08	77.08	uncharacterized protein LOC111488436 [Cucurbita maxima]	[more]
XP_023547947.1	1.4e-08	77.08	uncharacterized protein LOC111806743 [Cucurbita pepo subsp. pepo]	[more]
KAG6575660.1	1.4e-08	77.08	hypothetical protein SDJN03_26299, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022953425.1	3.2e-08	75.00	uncharacterized protein LOC111455984 [Cucurbita moschata]	[more]
KAG7025683.1	6.0e-07	68.75	hypothetical protein SDJN02_12181 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Spg035438 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg035438 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JUC2	6.9e-09	77.08	uncharacterized protein LOC111488436 OS=Cucurbita maxima OX=3661 GN=LOC111488436...	[more]
A0A6J1GPL5	1.5e-08	75.00	uncharacterized protein LOC111455984 OS=Cucurbita moschata OX=3662 GN=LOC1114559...	[more]
A0A6J1KVQ7	3.8e-07	70.83	uncharacterized protein LOC111498025 OS=Cucurbita maxima OX=3661 GN=LOC111498025...	[more]
A0A6J1H506	3.8e-07	70.83	uncharacterized protein LOC111460632 OS=Cucurbita moschata OX=3662 GN=LOC1114606...	[more]
A0A6J1CV15	1.4e-06	68.75	uncharacterized protein LOC111015032 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]

BLAST of Spg035438 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 276..297
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 276..292

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg035438.1	Spg035438.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane