Spg035345 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg035345
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Locationscaffold7: 21209277 .. 21210119 (+)
RNA-Seq ExpressionSpg035345
SyntenySpg035345
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCAGTTTTGGGCTAAACCAGAACCAGATGTTGCTCAAGTGGTGAGGGAGTTTTATACGAATATTGATGAAGACGAAGGCTTTCAGGTAATTTTCAGAGGGGTAGCGGTCGATTGATGTCCGAGGGCAATCAATTCGTTGTTCAACCTTCAGAACTACCCACATGCGGTTTTCAATGAGATGGCAATTGCTCCATCAAACGAACAGATGAATGTTGCAGTCCGCGAGGTGGGGGTTGAAAGAGCTCAATGGCGGTTGTCCAAGACTGAGAAGAGGACATTCCAATCTGCTTATTTGAAGAGTGAAGCCAACACATGGCTCGGGTTTGTCAAGCTGAGACTGCCACCCACCACCCATGATTCCACAGTTTCTATAGACCGAGTGCTTTTAGTATTTTCAATCTTGCATTCCTTGAGCATAGACGTAGGCAAAATTATTTCGAGTGAGATCCATAGCTGCTAGCGAAAAAAGGTAAGGAAATTGTTTTTTCCAAATACAATCACGATGCTTTGCAAACGAGCAGACGTTCTGGAGAGTGCGAATGACATCAAGCTATTTGACAAGGGAATAATTGACACAACAAACCTGGCCCGACTTCAGAGAGGAGAAGCGTGTCAGAGTGGTTTGTTGTGTGGCGCCCACCGAGTGCAGGAGCAACTTGAAATGTTGCTCAGTAGATTGGAGTTCACTAAAAGACAACTCCAAACATATTGGAGCTATGCAAAACGGAGGGACACCACGTCAAGGAAAGCTATGCAAGCCAACTTTTCCAAACCTTACCAAGCTTTTCCTATATTCTTAGATGACTTAATGAACCTCTGGTTCCACCGCCGCCAGTAG

mRNA sequence

ATGGATCAGTTTTGGGCTAAACCAGAACCAGATGTTGCTCAAGTGGTGAGGGAGTTTTATACGAATATTGATGAAGACGAAGGCTTTCAGAACTACCCACATGCGGTTTTCAATGAGATGGCAATTGCTCCATCAAACGAACAGATGAATGTTGCAGTCCGCGAGGTGGGGGTTGAAAGAGCTCAATGGCGGTTGTCCAAGACTGAGAAGAGGACATTCCAATCTGCTTATTTGAAGAGTGAAGCCAACACATGGCTCGGGTTTGTCAAGCTGAGACTGCCACCCACCACCCATGATTCCACAGTTTCTATAGACCGAGTGCTTTTAGTATTTTCAATCTTGCATTCCTTGAGCATAGACGTAGGCAAAATTATTTCGAACGTTCTGGAGAGTGCGAATGACATCAAGCTATTTGACAAGGGAATAATTGACACAACAAACCTGGCCCGACTTCAGAGAGGAGAAGCGTGTCAGAGTGGTTTGTTGTGTGGCGCCCACCGAGTGCAGGAGCAACTTGAAATGTTGCTCAGTAGATTGGAGTTCACTAAAAGACAACTCCAAACATATTGGAGCTATGCAAAACGGAGGGACACCACGTCAAGGAAAGCTATGCAAGCCAACTTTTCCAAACCTTACCAAGCTTTTCCTATATTCTTAGATGACTTAATGAACCTCTGGTTCCACCGCCGCCAGTAG

Coding sequence (CDS)

ATGGATCAGTTTTGGGCTAAACCAGAACCAGATGTTGCTCAAGTGGTGAGGGAGTTTTATACGAATATTGATGAAGACGAAGGCTTTCAGAACTACCCACATGCGGTTTTCAATGAGATGGCAATTGCTCCATCAAACGAACAGATGAATGTTGCAGTCCGCGAGGTGGGGGTTGAAAGAGCTCAATGGCGGTTGTCCAAGACTGAGAAGAGGACATTCCAATCTGCTTATTTGAAGAGTGAAGCCAACACATGGCTCGGGTTTGTCAAGCTGAGACTGCCACCCACCACCCATGATTCCACAGTTTCTATAGACCGAGTGCTTTTAGTATTTTCAATCTTGCATTCCTTGAGCATAGACGTAGGCAAAATTATTTCGAACGTTCTGGAGAGTGCGAATGACATCAAGCTATTTGACAAGGGAATAATTGACACAACAAACCTGGCCCGACTTCAGAGAGGAGAAGCGTGTCAGAGTGGTTTGTTGTGTGGCGCCCACCGAGTGCAGGAGCAACTTGAAATGTTGCTCAGTAGATTGGAGTTCACTAAAAGACAACTCCAAACATATTGGAGCTATGCAAAACGGAGGGACACCACGTCAAGGAAAGCTATGCAAGCCAACTTTTCCAAACCTTACCAAGCTTTTCCTATATTCTTAGATGACTTAATGAACCTCTGGTTCCACCGCCGCCAGTAG

Protein sequence

MDQFWAKPEPDVAQVVREFYTNIDEDEGFQNYPHAVFNEMAIAPSNEQMNVAVREVGVERAQWRLSKTEKRTFQSAYLKSEANTWLGFVKLRLPPTTHDSTVSIDRVLLVFSILHSLSIDVGKIISNVLESANDIKLFDKGIIDTTNLARLQRGEACQSGLLCGAHRVQEQLEMLLSRLEFTKRQLQTYWSYAKRRDTTSRKAMQANFSKPYQAFPIFLDDLMNLWFHRRQ
Homology
BLAST of Spg035345 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 93.6 bits (231), Expect = 2.4e-15
Identity = 80/295 (27.12%), Postives = 126/295 (42.71%), Query Frame = 0

Query: 3   QFWAKPEPDVAQVVREFYTNIDEDEGFQNYPHAV---FNEMAIAP--------------- 62
           QF A PE  +  +VREFY N+ + E    Y   V   ++E AI                 
Sbjct: 74  QFCAHPEDPIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGDPVDEHSEFI 133

Query: 63  ---SNEQMNVAVREVGVERAQWRLSKTEKRTFQSAYLKSEANTWLGFVKLRLPPTTHDST 122
              + + +   +  V    A+W +S     T   + L   A  W  F+K RL PTTH  T
Sbjct: 134 QNITQQDLITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKT 193

Query: 123 VSIDRVLLVFSILHSLSIDVGKIISNVLES---------------------------AND 182
           VS DR+LL+ S+L   SI+VG++I + + +                            N+
Sbjct: 194 VSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNE 253

Query: 183 IKLFDKGIIDTTNLARLQRGEACQSGLLCGAHR------------VQEQLEML------- 224
            KL + G ID   +AR+ +    +S     + R            + +QL+ L       
Sbjct: 254 EKLHNTGEIDAIAVARIAQEGPTESTQQPSSSRPATASSNRTNGDILQQLKALEQRLSQQ 313

BLAST of Spg035345 vs. NCBI nr
Match: PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii])

HSP 1 Score: 89.4 bits (220), Expect = 4.5e-14
Identity = 79/270 (29.26%), Postives = 119/270 (44.07%), Query Frame = 0

Query: 15  VVREFYTNIDEDEGFQNYPHAV---FNEMAI-------APSNE-----------QMNVAV 74
           +VREFY N+ + E    Y   V   ++E AI        P +E           ++   +
Sbjct: 16  LVREFYANLTDPEENTIYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIENITEPELITVL 75

Query: 75  REVGVERAQWRLSKTEKRTFQSAYLKSEANTWLGFVKLRLPPTTHDSTVSIDRVLLVFSI 134
             V    A+W +S     T   + L   A  W  F+K RL PTTH   VS DR+LL+ S+
Sbjct: 76  ETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKIVSKDRMLLLHSM 135

Query: 135 LHSLSIDVGKIISNVLES-------------------------ANDIKLFDKGIIDTTNL 194
           L+  SI+VG++I + + +                          N+ KL + G ID   +
Sbjct: 136 LNGKSINVGRMIHSEIRACAAQKTGALFFPSLITRLCRNAPFLVNEEKLHNTGEIDAIAV 195

Query: 195 ARL--------------QRGEACQSGLLCGAHRVQ-EQLEMLLSRLEFTKRQLQTYWSYA 224
           AR+               R  A  S    G    Q + LE  LS+ E T +Q Q +W+Y+
Sbjct: 196 ARITQEGPTESTQQPSSSRPAAASSSRTNGDVLQQLKALEQRLSQQEHTHKQQQQFWAYS 255

BLAST of Spg035345 vs. NCBI nr
Match: PON59596.1 (hypothetical protein PanWU01x14_158080 [Parasponia andersonii])

HSP 1 Score: 77.0 bits (188), Expect = 2.3e-10
Identity = 58/199 (29.15%), Postives = 91/199 (45.73%), Query Frame = 0

Query: 78  LKSEANTWLGFVKLRLPPTTHDSTVSIDRVLLVFSILHSLSIDVGKIISNVLES------ 137
           L   A  W  F+K RL PTTH  TVS DR+LL++S+L   SI+VG++I + + +      
Sbjct: 41  LTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLYSMLTGKSINVGRMIHSEIRACAARKS 100

Query: 138 ---------------------ANDIKLFDKGIIDTTNLARL-QRGEA------------- 197
                                 N+ KL   G ID   +AR+ Q G+              
Sbjct: 101 GALFFPSLITQLCRNARAPFLVNEEKLHITGEIDAIAVARITQEGQTELTQQPSTSRPTV 160

Query: 198 -----CQSGLLCGAHRVQEQLEM-------LLSRLEFTKRQLQTYWSYAKRRDTTSRKAM 224
                    +L     ++++L         ++S L+ T +Q Q +W+Y+K RDT  +KA+
Sbjct: 161 ASSSRANGDILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKAL 220

BLAST of Spg035345 vs. NCBI nr
Match: EOY13933.1 (Uncharacterized protein TCM_032752 [Theobroma cacao])

HSP 1 Score: 74.7 bits (182), Expect = 1.2e-09
Identity = 51/147 (34.69%), Postives = 71/147 (48.30%), Query Frame = 0

Query: 3   QFWAKPEPDVAQVVREFYTNIDE---DEGFQNYPHAVFNEMAIAPSNEQMNVAVREVG-- 62
           QF  +P   V  VVREFY  + E      F    H  F+  AI       N+   E G  
Sbjct: 64  QFCHQPNVVVVLVVREFYATVVEHVDGVAFVRGKHVPFHSQAINELLRTPNIENDEYGQY 123

Query: 63  ---------------VERAQWRLSKTEKRTFQSAYLKSEANTWLGFVKLRLPPTTHDSTV 122
                          +E AQW+ S  E  +F+ + +K E   WL FV  RL P+TH S V
Sbjct: 124 LGDHQDCNEIISTLCIEGAQWKTSHGEPVSFKRSVMKKELKVWLHFVAARLLPSTHISDV 183

Query: 123 SIDRVLLVFSILHSLSIDVGKIISNVL 130
           + DR +L+++I+   SIDVGK+IS+ +
Sbjct: 184 TKDRAVLIYAIVTHKSIDVGKVISHAI 210

BLAST of Spg035345 vs. NCBI nr
Match: PIN07564.1 (hypothetical protein CDL12_19862 [Handroanthus impetiginosus])

HSP 1 Score: 70.9 bits (172), Expect = 1.7e-08
Identity = 49/151 (32.45%), Postives = 75/151 (49.67%), Query Frame = 0

Query: 4   FWAKPEPDVAQVVREFYTNIDEDEGFQ--------NYPHAVFNEMAIAPS---NEQMNVA 63
           F A+PE  V  + REFY N  E + F+         +     NE+   P    +E  N  
Sbjct: 49  FIAQPESGVLPLFREFYANAAEHKNFKCLVRGREVPFDRVTINELYNIPPIELDEFENFC 108

Query: 64  VREVGVER---------AQWRLSKTEKRTFQSAYLKSEANTWLGFVKLRLPPTTHDSTVS 123
              +  E          AQW+++K E  +F+S  L   A  WL F+  ++ PT+H   V+
Sbjct: 109 ENGIDYEELTRTLCPHGAQWKMTKGEYISFKSNCLDKAAKIWLWFIFAQMLPTSHSGEVT 168

Query: 124 IDRVLLVFSILHSLSIDVGKIISN-VLESAN 134
            D+ LL++ I+   + DVGKIISN +++SAN
Sbjct: 169 ADQALLLYCIMTGKAFDVGKIISNSIIQSAN 199

BLAST of Spg035345 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.2e-15
Identity = 80/295 (27.12%), Postives = 126/295 (42.71%), Query Frame = 0

Query: 3   QFWAKPEPDVAQVVREFYTNIDEDEGFQNYPHAV---FNEMAIAP--------------- 62
           QF A PE  +  +VREFY N+ + E    Y   V   ++E AI                 
Sbjct: 74  QFCAHPEDPIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGDPVDEHSEFI 133

Query: 63  ---SNEQMNVAVREVGVERAQWRLSKTEKRTFQSAYLKSEANTWLGFVKLRLPPTTHDST 122
              + + +   +  V    A+W +S     T   + L   A  W  F+K RL PTTH  T
Sbjct: 134 QNITQQDLITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKT 193

Query: 123 VSIDRVLLVFSILHSLSIDVGKIISNVLES---------------------------AND 182
           VS DR+LL+ S+L   SI+VG++I + + +                            N+
Sbjct: 194 VSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNE 253

Query: 183 IKLFDKGIIDTTNLARLQRGEACQSGLLCGAHR------------VQEQLEML------- 224
            KL + G ID   +AR+ +    +S     + R            + +QL+ L       
Sbjct: 254 EKLHNTGEIDAIAVARIAQEGPTESTQQPSSSRPATASSNRTNGDILQQLKALEQRLSQQ 313

BLAST of Spg035345 vs. ExPASy TrEMBL
Match: A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.2e-14
Identity = 79/270 (29.26%), Postives = 119/270 (44.07%), Query Frame = 0

Query: 15  VVREFYTNIDEDEGFQNYPHAV---FNEMAI-------APSNE-----------QMNVAV 74
           +VREFY N+ + E    Y   V   ++E AI        P +E           ++   +
Sbjct: 16  LVREFYANLTDPEENTIYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIENITEPELITVL 75

Query: 75  REVGVERAQWRLSKTEKRTFQSAYLKSEANTWLGFVKLRLPPTTHDSTVSIDRVLLVFSI 134
             V    A+W +S     T   + L   A  W  F+K RL PTTH   VS DR+LL+ S+
Sbjct: 76  ETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKIVSKDRMLLLHSM 135

Query: 135 LHSLSIDVGKIISNVLES-------------------------ANDIKLFDKGIIDTTNL 194
           L+  SI+VG++I + + +                          N+ KL + G ID   +
Sbjct: 136 LNGKSINVGRMIHSEIRACAAQKTGALFFPSLITRLCRNAPFLVNEEKLHNTGEIDAIAV 195

Query: 195 ARL--------------QRGEACQSGLLCGAHRVQ-EQLEMLLSRLEFTKRQLQTYWSYA 224
           AR+               R  A  S    G    Q + LE  LS+ E T +Q Q +W+Y+
Sbjct: 196 ARITQEGPTESTQQPSSSRPAAASSSRTNGDVLQQLKALEQRLSQQEHTHKQQQQFWAYS 255

BLAST of Spg035345 vs. ExPASy TrEMBL
Match: A0A2P5CEY2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.1e-10
Identity = 58/199 (29.15%), Postives = 91/199 (45.73%), Query Frame = 0

Query: 78  LKSEANTWLGFVKLRLPPTTHDSTVSIDRVLLVFSILHSLSIDVGKIISNVLES------ 137
           L   A  W  F+K RL PTTH  TVS DR+LL++S+L   SI+VG++I + + +      
Sbjct: 41  LTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLYSMLTGKSINVGRMIHSEIRACAARKS 100

Query: 138 ---------------------ANDIKLFDKGIIDTTNLARL-QRGEA------------- 197
                                 N+ KL   G ID   +AR+ Q G+              
Sbjct: 101 GALFFPSLITQLCRNARAPFLVNEEKLHITGEIDAIAVARITQEGQTELTQQPSTSRPTV 160

Query: 198 -----CQSGLLCGAHRVQEQLEM-------LLSRLEFTKRQLQTYWSYAKRRDTTSRKAM 224
                    +L     ++++L         ++S L+ T +Q Q +W+Y+K RDT  +KA+
Sbjct: 161 ASSSRANGDILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKAL 220

BLAST of Spg035345 vs. ExPASy TrEMBL
Match: A0A061FAJ6 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_032752 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 5.6e-10
Identity = 51/147 (34.69%), Postives = 71/147 (48.30%), Query Frame = 0

Query: 3   QFWAKPEPDVAQVVREFYTNIDE---DEGFQNYPHAVFNEMAIAPSNEQMNVAVREVG-- 62
           QF  +P   V  VVREFY  + E      F    H  F+  AI       N+   E G  
Sbjct: 64  QFCHQPNVVVVLVVREFYATVVEHVDGVAFVRGKHVPFHSQAINELLRTPNIENDEYGQY 123

Query: 63  ---------------VERAQWRLSKTEKRTFQSAYLKSEANTWLGFVKLRLPPTTHDSTV 122
                          +E AQW+ S  E  +F+ + +K E   WL FV  RL P+TH S V
Sbjct: 124 LGDHQDCNEIISTLCIEGAQWKTSHGEPVSFKRSVMKKELKVWLHFVAARLLPSTHISDV 183

Query: 123 SIDRVLLVFSILHSLSIDVGKIISNVL 130
           + DR +L+++I+   SIDVGK+IS+ +
Sbjct: 184 TKDRAVLIYAIVTHKSIDVGKVISHAI 210

BLAST of Spg035345 vs. ExPASy TrEMBL
Match: A0A2G9GQI5 (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_19862 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 8.1e-09
Identity = 49/151 (32.45%), Postives = 75/151 (49.67%), Query Frame = 0

Query: 4   FWAKPEPDVAQVVREFYTNIDEDEGFQ--------NYPHAVFNEMAIAPS---NEQMNVA 63
           F A+PE  V  + REFY N  E + F+         +     NE+   P    +E  N  
Sbjct: 49  FIAQPESGVLPLFREFYANAAEHKNFKCLVRGREVPFDRVTINELYNIPPIELDEFENFC 108

Query: 64  VREVGVER---------AQWRLSKTEKRTFQSAYLKSEANTWLGFVKLRLPPTTHDSTVS 123
              +  E          AQW+++K E  +F+S  L   A  WL F+  ++ PT+H   V+
Sbjct: 109 ENGIDYEELTRTLCPHGAQWKMTKGEYISFKSNCLDKAAKIWLWFIFAQMLPTSHSGEVT 168

Query: 124 IDRVLLVFSILHSLSIDVGKIISN-VLESAN 134
            D+ LL++ I+   + DVGKIISN +++SAN
Sbjct: 169 ADQALLLYCIMTGKAFDVGKIISNSIIQSAN 199

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PON46472.12.4e-1527.12hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii][more]
PON78020.14.5e-1429.26hypothetical protein PanWU01x14_023740 [Parasponia andersonii][more]
PON59596.12.3e-1029.15hypothetical protein PanWU01x14_158080 [Parasponia andersonii][more]
EOY13933.11.2e-0934.69Uncharacterized protein TCM_032752 [Theobroma cacao][more]
PIN07564.11.7e-0832.45hypothetical protein CDL12_19862 [Handroanthus impetiginosus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2P5BCG41.2e-1527.12Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
A0A2P5DXM32.2e-1429.26Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE... [more]
A0A2P5CEY21.1e-1029.15Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE... [more]
A0A061FAJ65.6e-1034.69Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_032752 PE=4 SV=1[more]
A0A2G9GQI58.1e-0932.45Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_19862 P... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 165..185

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg035345.1Spg035345.1mRNA