Spg035340 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg035340
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPPPDE domain-containing protein
Locationscaffold7: 24211929 .. 24221944 (-)
RNA-Seq ExpressionSpg035340
SyntenySpg035340
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATACGTCCCACTTTGTATTTGATACAAACGCCATGATTCAATGCATTCGTGTAGGAGTCATGCGAGTGGGGGCATCCTATGCAATGAGTTTGCATAAGACCGGACCGCGAAATAGTAACCACTGGTTATAACACCGTTAACTAGTTATGTTTCTATTTCACTGGGACGACCTATACAATTTAGTCTTAATCCTGAGTTGATTGTGGACTCCTGCTCATAAGAGATTGTCCTTTGACTTGTATGGGTGAGAGTGGCCAACACGCCGACTCAATAAGCCTACCATTTTGGGGACATGATCGAGTGGGAAGCTGGGAACATAATCACATAAGATGGAATTCACTCCTTCCCAACTTTAGGGAAGCAGATGAGTGTTCCCTTAAGTGGTGACTCCGAGTCTTAAACAAATGGCCCTACCCTCTCAGTGGCACGAGAGAGTTTTCTGTTTGATGGTTGGACCACAAACAGGTTGTTCATTAGAGGAGAATTGGTACTTAAGAAAATAGAAGTAACTCAGGGGTAAAACGATAATTTGACCCAGCTGGTGTTACAGACACTCGTGAAGGACTAACTAGTCGTTATTGGACAATATCCGTGGACACAGAAAATATATCTGCAGTGAGAAGAGTGCAACTGTGAGTCTATAGTGGAATGTACACACAGTTAACAAATATTGATTAATTTGGTTAATGAGTTTGACCAATTAATCTCACATCGTTGGAGCTTCTGATCTGCAGGTCCATTAGGTCCCACTGGTAGCTCATAAAGTAATTTGAGGCAACTAAGTAAGATATGTAAATTGAAAGTGTTCAATTTACCAAGGGAAACAATATAATATATATTGATATATTATTATGAGAGAAATAAATATTTGAAGAAATTTCAAATATTAATATAAATTTGATTCATATTAAATTTATAGGAATTTGACAGAGTTCAAATATGAATTAAATTAATTTAAGGCCTAAAATTAAATTGGGCAAAATTAATTAATTCAAGGCCGGAAATTAAATATGTGATATTTAATGGTGATTAATTAATTAAAGAATTAATTAATTGAAAAATAATCAATTATGGAAATAATTAATCACTTATGGGAGTGATTAATCATTTATGGAAATGATCTAATCACTTATGGAAGTAATTAGTCATTTATGGAAAAGATTAATTAATTACGGAATTGATTGATCATGGATTGATTAAATATGGAATAGATTAAATCAGTTATGGAAATAATTGATTTAATGTGAATATTTTATTCATGGCCTTTCTCCTATAAATAGAACATTTGACCTAATAGTTTAGGTGTCCTCTTGCTCTTAGAATCACAAGACAAGACTTTTGCATTCTGACAAGACTCTTGCATTCTCTCTAGCCTCCCTCTTAGAGAAAGACTCCCACCAGTCAATTGCCTCCTAGACTTGGAGATGTACCGGTGTAACCTCCAACGAAGAAACTCAAGGAGGTTGCTGTGTTTTTCGTCTTTAGAGCGTCGTTGGCGAGAATCAGTCAAGTCTACAACGAAGGTTCACTACAACAATTTGGGGCTACGATATCGGATTGTATTTTTACAACAATGACGGATTGACTCTAAGATGACGAATTGTGAAAAAATGCAACTTTTTCCAAAAAAAAATGTTAACTTTCAAAAATTTGGGGTACAATGACGGTTTCTAACCGTAATTAAAGAAGACCCTTCCACGACGGTTCTTACCCGTCATCTAACGTTTGTAAAAAAATGGAAACCTACAATGACAGTTTTAAACCGTTATTACATGTAATTTAAAAAGGGGGCGAAAAGATTGCTCATCGATGTCGGTTTAAAACTGTCATCAAAGGGAGACCTTCGATGTCCGTTATCATCCGTCATTAAAGATGTGTATAAAAAAGGCACCGGGTTTTTTGGAGAAATACGAAAAATTTTCGTAAAAATTTCTCAGCGATGTTGGTTTGAAACCGTCATCAAAGAGAGACCTTCGATGTCGGTTATCGCCTGTCATTAAAGATGTGTATAAAAAAGACACTGCGTTTTTTGGAGAAAGACGAAAATTTTCATAAAAGTTTCTCAACGATGTCGGTTTTCGCCAGTCATCTAACGTGTCATCCATGGTGGGCTTCAATAACGGTTTCAGGCCTGTTATCGTATGATGGGCTTCTATGTCGGTTTTGGTCCTATTTCATTAAAGTATTGGACCAATCTATAGATGACAAGTTTAAACCGTGATTAAATGATGGCTTCAATGACGAGTTTGGCCCTTTTTCTTTTACTTTCTTTTTCCCTTTAAGAACAGTTTGGGACCTACGCGTTACGTATGCCCTCATTAGTTTTTATTTTCTCATAGCTCTCTTTCATATACGGCGACAATCTCTGAGTGTTTTACGGCGGCGAAGCTCTGCGTAAAGGACGGCGACAGCGACTCTGTTTAATCGGCGGCGACGGTTTTGGGTGTTTAACGACGGCGACGGTCTGCCTTTCATACACGACTATGGCGACGGTCGTATATGAAAGCCCAAACCCTTCTTTTTTTCTTTGTGAAAAATTCTTCGACCCAAAGCCCAAACCCTTCTTTTTTTTCTTTGTGAAAAATTCTCTCGATTCTCTCAATTCACTGACGATTGATTTCCCATTTCGTTCTGTTTTGTTGGTAAGGAATTGAAGCACTTTCTTAGATTTTTCCCTTGTTGGGTTTCTCAATTTTGGTTCTCTTTGATGAAATTTCTCTGGTTTTAAACTTATTTTTGTGGGTTTTTGATTTCAGAGAGATAGAGAAGAAGAAGAAGAAGAAAAGAAGTGGTGGGTTTGGGAAAAATGTTGTGCAGAATTGCTTTGATGTCGAAAAAGAAGAAAAGTGGAACAGTGCCGGTTTATTTGAATGTTTATGATTTAACGCCAATCAATGGCTATGCGTATTGGCTCGGTCTTGGGGTTTACCATTCCAGTGTTCAAGGTGAGAAAATTTATGGCGTTTTGTTTTCTTCCTCTTCTTCTTTTTGTTCGTTGTTAGCAGAGATATGAAGCGCAATGACGCCGATCAATGTATTTGATCATGTTATGTTTGCTGCCTTTTCATGTCTGATTTTCTAGGAGAATGTGACTGAAATCGTTTCTAAAATTAGAATGTTAAATTAAAATGTTGTTGAAATTTTATATCACGTGGGCCTACTACTTGAGAAACGGTATGATAAATTTATACTTGAGAAACAATATGATAAATTTATGAATTGCATGTTTTATTCATAATTAATTGGAAATATATGCATCACTTGTCATTCACAAATATATGCTATCACTTGTCATTCTCAGTTTTTTTATTAATTGCTATCAACATGAACTATGCTTTGTAGTTAAGATATTTCTACTTCCCCTAAAAGGTTGTAGGTTCGAATTACCTACCTCCCTGTGATGTAACATTCTCAGAAAAATATTTCATTAGTTGCTCATTCTATCTTTTTTATCAATGTTGCTGTATACAGGCTTTGGTGGATGCTCCCGATATGGTTAGTGAAGGATTGGAATTCCGTAATTTCGTAAAGCGGAAGCGTGATTGGGACTGATTCGTAATTAATTCTGTTTAATCTAAAATACCAATACATTGACAATAATATTAGAACTATTCTAAATATATATTAAGGCTAAGCATACAAAAATATTAGATCTAAATCTAATTTATATAGTAACAAATTACTTACTCTCGTTGACGACTCAGATTAAATTCACCAACTGGTTGTGAATTAATCACGAACTAGTGCGAACACCACCACTATGGCTACACCGGTATGACTCTGAGACTTCTAGAGGCAGGAGACTGGTGGGAGTCTAGAGGAAGCCTTGAGTGGAATTCTCTGAGAGTAGGAGAATGAATGAGATGCCTTTCACCCCACCCCAGGGGTCCTATTTATAGGTAAAGGCCAAGACCTTTTTCCTAATAGGAAAAAGTCTCTAATTTTAATAAATAATTAATTAATTTCATAATTAATTAATTTCTCTAATTAAATATCATATATTTAATCTTAGGAATTTTATTAAAATTAAAATTAATATGAATCCATTCATATTAAATTTATTTGAACTCTTTCAAATATTTTCTTTCCTAATAGGAAAAGGTCTCTAATTTTAATAAATAATTAATTAATTCCATAATTAATTAATTTCCTAATTAAATATCATATATTTAATCTTAGGAATTTTATTAAAATTAAAATTAATATGAATCCAATTCATATTAAATTTATTTGAACTCTTTCAAATATTTTCTTTCCTAATAGGAAAAGATCTCTAATTTTAATAAATAATTAAAATTAATTTCATAATTAATTAATTTACCCAATTAAATATCATATATTTAATCTTAGGGATTTTATTAAAATTAAAATTAATATGAATCCAATTCATATTAAATTTATTTGAACTCTTTCAAATATTTTCTCTCAAGAATTAATTTTTGAAATTAATTCAAAAATTATATTATAAAGTTTCATAAACTTTATATTATATTGCATCAATATACATTATATGATTCCCCAAAAAAATTGAACACTTTCAATTTACAATTTATACTTGAATGCCTCAAGTCTCTTTTACGAGCTACCAGTGGGACCTAATGGACCTACAAATCAGAAGCTTCAACGAAACGAGACTAATTGGCCAAACTCATTAACCAAGTTTAGTCAACATTCGTTAACTTGGGTCACTCCACTAAAGACCCACAGCTACACTCTTCTCACTGTATAATATTTCTGTGTCCACGGATATCGACCAATGCAGTAAGTCAATCCTTCACGTGTGTTCGTAACACCAACTGGGTCAAATTACCGTTTTACCCCTGGGTTACCTCTGGTTCCTTAAGTACCACTGATTCCTCTAATGAACAAGTTGTTTAGGGTCCAACCACTAAACAGGAGTTCCTCTCGGGCAAGGAGAGGATGGCGCGCCTTTGTTCAAGCCCCGAAATCAGCTCTTAAGGGAACACACATCTACTTACCCTAATAGGGGAATGAGTGAATTCCATTATGTTCCCAGCCCCCATTTGGTCTTGCCCCTGAAATGGTAGGATTATTGAGTCGGCGAACTGGCCACTCTCACTCATACAAATCTAAGGATAATCCCTCCTGAAAGGGGTTCATAACAGACTCAGGATTGAGATTGCGTTACCTAGGTCATCCTATTGAAATAGAAACCTAAACTAGTTAACGGCATTACATCTAGTGGTTACTATTTCGCGGTCCGGTCTTATGCAAACTCATTGCATAGGATACCCCCACCCGCATGTCTCCTACATGGATGCCTTGGATCATTGCATCTGTATCGAATACAAGGTGGGTCGTATCACATAGTGTCGCCAGGATAAGGTACCCAGCCTTATCCCTATACTATAGACCTTTTAGGTTGTTACTTGAACACCGATCCCCATATGTCCCCACATACTAGTTCAAGTTTCATTTAAACAACCTTGGATCTTAGTTTATTGGATTAAGGGTTTATTAATGCAAACTCGATTATTCAATAACCAAATTACTGAATTACTCAAATACGCTTTATTGAGATCGATTAATTTGTTTCATTTACTATCTACGAGTTTTAGGGCGTAAAACCCAACAGTTAGGTCTCGAATGAACTTTAAGAGACTTTTTCTTACTGACATTAAAATTGACATTAAGAGGGTCCCTAGGAAGAAAGAACTCATTGAAGCTATGAAGGCGGCTGGTAGGCTTTTCCAATGCATTGATGAATAGGAATTGTTCAGATTCTACTTTCTGTCAGTTGGATATGGTTTCGGGTTGGTTTATGTGTCTATTTAAGTATCGTGGTGTAGATCCGGTCGGATTTTTGTTTAATTGAAGATGTGTGATTTTAGATCTAATGCAGCCACTTCATTGTCCTTGAGTTGGGGCTAGATGCAAGCCAAGGCTGTAAATTCTCTTATGTCGTTCGGCTTATTTCTAAACTTAGGCTTCTGTATATATTTACGGTACTTTTTCTTAAATATAATCGTAATATCTATTTTTTTTTTGTAGTTTAATCTTGTTATGAATAATTTTGGCATAATAGAAATTGGACCCTGTGAGCGACTTTGGGCCCGAACCAGATAGGCCCACGGAGAGAATGCGACCTGGATTGGATCAAACCTCTCCTCGGCCTCGGCATTGGGCTGAGGTCGAGGAGGTGGTTGGCCTTGGCAGCTGGCCGAGGCCGACCAGGAGCATAAGCCCTTGAGGGCTGCGTGGGTCAGTGGGAGGTCCTCCTAGGCCCAAGAGAGCAGGGTTCGTGAAGTAGAAGTCAACCAGTGACGATGAGAGGCGGAAAACCCTAATTGGAGAGGAGATATAAAAGGTCCTTTGGGGACCTAGGTAAGGGGGTCGAAATCTGAATTCCTAAACTCGATACCTTGACAGTTTCTCTATTGCTTTGCTGGATTCTCTCCGATCACTGACTTAGGCATCGAAGCGTGTGTGGCAAGCACCACACCGGTGTGCAGTGTTTACTTCCTTGTTTGCAGGTCACGTCTTCCTCGGATTCAAATAAATTCACTGTTGGTGTCACGTGAAGGTCAGGTGAGCGCTTGGCCGGATTTTACCATCAACAATACTAAAAATCCGTTTACACAAGAACAACTGGACGAGATATGAGTTGAATGGGTGGGACATGTGTCAAACTTCATGTGAAGTATTCATCCTTGTGGTAGCTAGATGTTTCCTTTCAGACAATGTAGGATATGTGTAGGGTTTTCATGACATATACATGTGGTAGTTTGAATGGACAAAAAAGCGATTGTGCTTAACATTTTATTCTTTTTGTAAATCTTTTAGTTTACTATATAGTTTAGAAAAATTTAGTGGTTTCAAATATTGTATTGTGACGTTTGGAGTTTTTTGGATCGAATGAAATAAAATATTTGATGTTTTCTCAATTGCTGTATTTGGATTGATTGAAATAATATTCTCAAATATTCGTTTTAAATATCGGTAGATTGGATCAATTAAAATATTTTACATTGCAATAAGTATTCAGGATGTGGATTTGAATTATGGCAATAAATATGTTGCAGGTGGTATGAGGAACGATGTCAGTTTATAACTGTCATCTTATGACACTATTATAACAGTTATAAACCGTCATTGTTGTAATCCGTCATCGTACGTGTTCAATCACACCCAGAACAACCACAGTTTTAAACCGTTATTGTTGTAATTCATCATCGGACGTGTTCAATCACACTTAGAACAACCACAATTTTAAACCGTCATTGTTCTAATACGTCATCGTACGTGTTCAAACACTCCCAGAACAACCACGGTTTTAAATCGTTATTGTTGTAATCCGTGATTATACATGTATGATCACAGAGGCGTTTGATGACGGTTTTAAACCATTATTGTTGTAATCCATTATCATAGGGGTTCAATCACACCAAGAACAACAATGGATTCAAACCTGTGATCATAGGGGGTTAATAACGGTGCAAAACCGACATCTAAGCCCAAAATTGTTGTAGTGGTTTGTAACGGTTACTCTTTTCTTTAGAAAAGTATGAAAAATAAAGTAGCTTTATTTTTCTATACTTTCAGCATGTTTATAACGTTATTACAACGACTTTATAGCATGATTAAAGTAGCGTTTTGTCTTTTCGTATTGGTATTTTAATGTTAATTAATATATGGCGTGAGGTCCTCTCGACGTGCTTCCGCTGTGCCGGTGCTTTCATCCCCTTCATTACCGACCCCTGATCATTGATCGGTTGTCAGTATGCTAATAATTTAATATGGAATTATCTCAGATATATATCAATCCAAGTATAAATTGACACAATCAAGTAATACCTAATGAGTCTAGGGTCGAATCCACAGGGAAAGGTTATTTGCAAAGCTTTAATAATGTTTATTGATCTGAACTCAAAAACGCGTGATATTATGAAAAACTAAATAAGAGAGTTGATGAGTGTGAATGATAAATATTGCAGGAAAGTAAAACATGCGTTGAGAGCAAAAAGGGAAGTCTTAAGGAGAATATTATCAAGGTTGTTGCGGTCGCAACCTCATGCGTTTATAAGAACCTTGTAGCGCATACCATGACTAATTGATCCATTAATGCCTAAGTGAGAAAAAATCACAAGTTTCCCTTCTGGTACTACTTCTGCGTTTGGCATAAAACTATCAAATGTTTGTTTGGCTAGTTCATGTGTGGGCTTAGTTCTCTAACAACTTACAAGGGACTGCGTTAGTCTTAACGCAATCAAAGCTCATTCATGCACTATCTTATAGCGGTAGTATGTATCTAATGCTACCAATACTACATGCAATGCGCTAACTTGTTCTACTTAGATATGTCCGCATGCATTACCTGTCAGGGATTTATTATGCTGCTACCGCATCCGGCTGGCCAGGCGAGAGTTAGTAATGAAAACAGTTGCGCTTACAAAGTAAAACCTATCACCGCATGGGTTCTTGCACTAAGCCTTGATGATGAAAATTAGCTCATGTGAGCAAAACAATACATTAAGCAATACATTGCAAATGCAAGTCTACCCTTAATCACAGCTTTTTGTGATTTCTCTTTCTCTTTGCTTCTTTGATCTTCGTCTCCTCCCTCTCGTCTCCCTTTCCTTTGAGCAGATGGCCTCTATTTATAGGCGAAGGAGACTGACTTCTCCAAGGAATTAGAAAACTTGCCTCAGTCATCTTCAGCCCACTTGCGCGTCAGTGTGTTAGCACGGTCTTTTCATCCATCTTGTCTGTTCCTGATCGTCTTGGGATGTGTTCCTGCGCTGAGAGAAACTTGGGCAACAAACAACTGAATTAATTACGTTAGCACCCTTTATTTTTATAATTTCGCACCGCAAACATAATTATAGCCTATCGCAGAAAACCATCGCATTTTCCTTCCTTATTGCGTTGAGGTAATGCATCAGTATATCTTTTAGCCTTGTTTTAGCTTAAGTTTAAAGGATAAATAACTTGCTTTTTGAAAGTTATCAATCATTATGCTAGACGACCACTTAATGCTCAGTATGTTAAATTTACGTATAATTTAAATTTAATATAAATTTGTATAATAATATGTTTTAATTATATTATATAATGTGCAGATGAAATGAAATTTTGGCAGCATCTGAGCAAAGTACAAATATGTTGATTATATATCGTATTACATTTGATCGTCTTATGTCCAACCAGGTAAAACAGTAATCAATTTTTTTCTCAAAATTAGTACAAATATGTTGATTATGTATCATATTAAATTTATTATTTTATAAATTTCAGATCACATGGACATCATATACATATGATATAATGACCTTACTACTGGACTACTACCATAATGGACAGGAGATTTTGTTGACTGTAAGCCCTCTCATATGTTTTCATATCGTAGAGTGACATTACCCAAATCGAGTGCTGAGACAATTTGGAATGCGACAAATGGTGGCGCCATATTGTGATACAGGCATGGCGTTGCATCAGTTGGACTTGCGAGGTAAGCACGATCACGATTGGCGACAACATCATGCAACATTTATATCACTGTGGCATGCACGTCATGATCATTGTGTCTTTGGTGACATAGTAGACATGCCAGTTGTGACCGATAACTACTTACACTGGTATGATTCAATCACAAGGAGGTATATCACTCGTGAGGGTGCTATATAATTATGTTTGCACGATAAATAGTATATACTTCGATTTGTTATTATTGAATTTCAATTATAAATATTATTATTATATTATTTTAATTATTTTCTTCTTACAAAATAACTTTGTTCGAGATGTACAACATTTTTCTGTGGAATAAAATATACCATAGTTAGGTTCTATGTGTGAGTAATACGTCACGAACATAACTGACATCAATCAACAAACTAGGAGGCTGACCGTTGCTGACACTGATTAGACACGTGCTCGTCGTAGACGTCATCGACAACAGGTTGCAGACATTCCACAGCTGAATGAAGATGAAGAACCTCTTATAGTTGATGATGACACTTCAACTCTTCATGTACAGCCACTGGCAAATTAG

mRNA sequence

ATGTCGAAAAAGAAGAAAAGTGGAACAGTGCCGGTTTATTTGAATGTTTATGATTTAACGCCAATCAATGGCTATGCGTATTGGCTCGGTCTTGGGGCTTTGGTGGATGCTCCCGATATGTGCGAACACCACCACTATGGCTACACCGGTATGACTCTGAGACTTCTAGAGGCAGGAGACTGGTGGGAGTCTAGAGGAAGCCTTGAGTGGAATTCTCTGAGAGATACCCCCACCCGCATGTCTCCTACATGGATGCCTTGGATCATTGCATCTGTATCGAATACAAGGTGGGTCGTATCACATAGTGTCGCCAGGATAAGCCACTTCATTGTCCTTGAGTTGGGGCTAGATGCAAGCCAAGGCTGTAAATTCTCTTATGTCGTTCGGCTTATTTCTAAACTTAGGCTTCTGTATATATTTACGAAATTGGACCCTGTGAGCGACTTTGGGCCCGAACCAGATAGGCCCACGGAGAGAATGCGACCTGGATTGGATCAAACCTCTCCTCGGCCTCGGCATTGGGCTGAGGTCGAGGAGTTTCTCTATTGCTTTGCTGGATTCTCTCCGATCACTGACTTAGGCATCGAAGCGTGTGTGGCAAGCACCACACCGGTGTGCAGTGTTTACTTCCTTGTTTGCAGGTCACGTCTTCCTCGGATTCAAATAAATTCACTGTTGGTGTCACGTGAAGGTCAGATATGTCCGCATGCATTACCTGTCAGGGATTTATTATGCTGCTACCGCATCCGGCTGGCCAGGCGAGAGTTAGCGAAGGAGACTGACTTCTCCAAGGAATTAGAAAACTTGCCTCAGTCATCTTCAGCCCACTTGCGCACACGTGCTCGTCGTAGACGTCATCGACAACAGGTTGCAGACATTCCACAGCTGAATGAAGATGAAGAACCTCTTATAGTTGATGATGACACTTCAACTCTTCATGTACAGCCACTGGCAAATTAG

Coding sequence (CDS)

ATGTCGAAAAAGAAGAAAAGTGGAACAGTGCCGGTTTATTTGAATGTTTATGATTTAACGCCAATCAATGGCTATGCGTATTGGCTCGGTCTTGGGGCTTTGGTGGATGCTCCCGATATGTGCGAACACCACCACTATGGCTACACCGGTATGACTCTGAGACTTCTAGAGGCAGGAGACTGGTGGGAGTCTAGAGGAAGCCTTGAGTGGAATTCTCTGAGAGATACCCCCACCCGCATGTCTCCTACATGGATGCCTTGGATCATTGCATCTGTATCGAATACAAGGTGGGTCGTATCACATAGTGTCGCCAGGATAAGCCACTTCATTGTCCTTGAGTTGGGGCTAGATGCAAGCCAAGGCTGTAAATTCTCTTATGTCGTTCGGCTTATTTCTAAACTTAGGCTTCTGTATATATTTACGAAATTGGACCCTGTGAGCGACTTTGGGCCCGAACCAGATAGGCCCACGGAGAGAATGCGACCTGGATTGGATCAAACCTCTCCTCGGCCTCGGCATTGGGCTGAGGTCGAGGAGTTTCTCTATTGCTTTGCTGGATTCTCTCCGATCACTGACTTAGGCATCGAAGCGTGTGTGGCAAGCACCACACCGGTGTGCAGTGTTTACTTCCTTGTTTGCAGGTCACGTCTTCCTCGGATTCAAATAAATTCACTGTTGGTGTCACGTGAAGGTCAGATATGTCCGCATGCATTACCTGTCAGGGATTTATTATGCTGCTACCGCATCCGGCTGGCCAGGCGAGAGTTAGCGAAGGAGACTGACTTCTCCAAGGAATTAGAAAACTTGCCTCAGTCATCTTCAGCCCACTTGCGCACACGTGCTCGTCGTAGACGTCATCGACAACAGGTTGCAGACATTCCACAGCTGAATGAAGATGAAGAACCTCTTATAGTTGATGATGACACTTCAACTCTTCATGTACAGCCACTGGCAAATTAG

Protein sequence

MSKKKKSGTVPVYLNVYDLTPINGYAYWLGLGALVDAPDMCEHHHYGYTGMTLRLLEAGDWWESRGSLEWNSLRDTPTRMSPTWMPWIIASVSNTRWVVSHSVARISHFIVLELGLDASQGCKFSYVVRLISKLRLLYIFTKLDPVSDFGPEPDRPTERMRPGLDQTSPRPRHWAEVEEFLYCFAGFSPITDLGIEACVASTTPVCSVYFLVCRSRLPRIQINSLLVSREGQICPHALPVRDLLCCYRIRLARRELAKETDFSKELENLPQSSSAHLRTRARRRRHRQQVADIPQLNEDEEPLIVDDDTSTLHVQPLAN
Homology
[Close]
BLAST of Spg035340 vs. NCBI nr
Match: KAA0064599.1 (deSI-like protein [Cucumis melo var. makuwa] >TYK19991.1 deSI-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 72.0 bits (175), Expect = 1.0e-08
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0 

Query: 1  MSKKKKSGTVPVYLNVYDLTPINGYAYWLGLG 33
          MSKKKKSGTVPVYLNVYDLTPINGYAYWLGLG
Sbjct: 27 MSKKKKSGTVPVYLNVYDLTPINGYAYWLGLG 58

[Close]
BLAST of Spg035340 vs. NCBI nr
Match: XP_038896454.1 (deSI-like protein At4g17486 isoform X2 [Benincasa hispida])

HSP 1 Score: 72.0 bits (175), Expect = 1.0e-08
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0 

Query: 1  MSKKKKSGTVPVYLNVYDLTPINGYAYWLGLG 33
          MSKKKKSGTVPVYLNVYDLTPINGYAYWLGLG
Sbjct: 8  MSKKKKSGTVPVYLNVYDLTPINGYAYWLGLG 39

[Close]
BLAST of Spg035340 vs. NCBI nr
Match: XP_004145512.1 (deSI-like protein At4g17486 [Cucumis sativus] >KGN55449.1 hypothetical protein Csa_012914 [Cucumis sativus])

HSP 1 Score: 72.0 bits (175), Expect = 1.0e-08
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0 

Query: 1  MSKKKKSGTVPVYLNVYDLTPINGYAYWLGLG 33
          MSKKKKSGTVPVYLNVYDLTPINGYAYWLGLG
Sbjct: 8  MSKKKKSGTVPVYLNVYDLTPINGYAYWLGLG 39

[Close]
BLAST of Spg035340 vs. NCBI nr
Match: KAG7024432.1 (DeSI-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 72.0 bits (175), Expect = 1.0e-08
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0 

Query: 1  MSKKKKSGTVPVYLNVYDLTPINGYAYWLGLG 33
          MSKKKKSGTVPVYLNVYDLTPINGYAYWLGLG
Sbjct: 8  MSKKKKSGTVPVYLNVYDLTPINGYAYWLGLG 39

[Close]
BLAST of Spg035340 vs. NCBI nr
Match: XP_022936663.1 (deSI-like protein At4g17486 [Cucurbita moschata])

HSP 1 Score: 72.0 bits (175), Expect = 1.0e-08
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0 

Query: 1  MSKKKKSGTVPVYLNVYDLTPINGYAYWLGLG 33
          MSKKKKSGTVPVYLNVYDLTPINGYAYWLGLG
Sbjct: 8  MSKKKKSGTVPVYLNVYDLTPINGYAYWLGLG 39

[Close]
BLAST of Spg035340 vs. ExPASy Swiss-Prot
Match: Q93VG8 (DeSI-like protein At4g17486 OS=Arabidopsis thaliana OX=3702 GN=At4g17486 PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 4.7e-04
Identity = 17/27 (62.96%), Postives = 21/27 (77.78%), Query Frame = 0 

Query: 6  KSGTVPVYLNVYDLTPINGYAYWLGLG 33
          ++   PVYLNVYDLTP+N Y YW G+G
Sbjct: 22 EAALTPVYLNVYDLTPVNNYLYWFGIG 48

[Close]
BLAST of Spg035340 vs. ExPASy TrEMBL
Match: A0A5A7VGG1 (DeSI-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001070 PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 5.0e-09
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0 

Query: 1  MSKKKKSGTVPVYLNVYDLTPINGYAYWLGLG 33
          MSKKKKSGTVPVYLNVYDLTPINGYAYWLGLG
Sbjct: 27 MSKKKKSGTVPVYLNVYDLTPINGYAYWLGLG 58

[Close]
BLAST of Spg035340 vs. ExPASy TrEMBL
Match: A0A6J1IMU9 (deSI-like protein At4g17486 OS=Cucurbita maxima OX=3661 GN=LOC111476656 PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 5.0e-09
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0 

Query: 1  MSKKKKSGTVPVYLNVYDLTPINGYAYWLGLG 33
          MSKKKKSGTVPVYLNVYDLTPINGYAYWLGLG
Sbjct: 8  MSKKKKSGTVPVYLNVYDLTPINGYAYWLGLG 39

[Close]
BLAST of Spg035340 vs. ExPASy TrEMBL
Match: A0A0A0L339 (PPPDE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G652130 PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 5.0e-09
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0 

Query: 1  MSKKKKSGTVPVYLNVYDLTPINGYAYWLGLG 33
          MSKKKKSGTVPVYLNVYDLTPINGYAYWLGLG
Sbjct: 8  MSKKKKSGTVPVYLNVYDLTPINGYAYWLGLG 39

[Close]
BLAST of Spg035340 vs. ExPASy TrEMBL
Match: A0A6J1FDV3 (deSI-like protein At4g17486 OS=Cucurbita moschata OX=3662 GN=LOC111443190 PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 5.0e-09
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0 

Query: 1  MSKKKKSGTVPVYLNVYDLTPINGYAYWLGLG 33
          MSKKKKSGTVPVYLNVYDLTPINGYAYWLGLG
Sbjct: 8  MSKKKKSGTVPVYLNVYDLTPINGYAYWLGLG 39

[Close]
BLAST of Spg035340 vs. ExPASy TrEMBL
Match: A0A1S3BVP4 (deSI-like protein At4g17486 OS=Cucumis melo OX=3656 GN=LOC103493768 PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 5.0e-09
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0 

Query: 1  MSKKKKSGTVPVYLNVYDLTPINGYAYWLGLG 33
          MSKKKKSGTVPVYLNVYDLTPINGYAYWLGLG
Sbjct: 8  MSKKKKSGTVPVYLNVYDLTPINGYAYWLGLG 39

[Close]
BLAST of Spg035340 vs. TAIR 10
Match: AT5G25170.1 (PPPDE putative thiol peptidase family protein )

HSP 1 Score: 63.5 bits (153), Expect = 3.4e-10
Identity = 27/30 (90.00%), Postives = 29/30 (96.67%), Query Frame = 0 

Query: 3  KKKKSGTVPVYLNVYDLTPINGYAYWLGLG 33
          +KKK G+VPVYLNVYDLTPINGYAYWLGLG
Sbjct: 11 RKKKPGSVPVYLNVYDLTPINGYAYWLGLG 40

[Close]
BLAST of Spg035340 vs. TAIR 10
Match: AT2G25190.1 (PPPDE putative thiol peptidase family protein )

HSP 1 Score: 59.7 bits (143), Expect = 5.0e-09
Identity = 24/32 (75.00%), Postives = 29/32 (90.62%), Query Frame = 0 

Query: 1  MSKKKKSGTVPVYLNVYDLTPINGYAYWLGLG 33
          + +KK+SG+VPVYLNVYDLTP+N Y YWLGLG
Sbjct: 8  VKRKKQSGSVPVYLNVYDLTPMNAYGYWLGLG 39

[Close]
BLAST of Spg035340 vs. TAIR 10
Match: AT4G31980.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158), Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G11290.1); Has 1967 Blast hits to 1844 proteins in 183 species: Archae - 0; Bacteria - 6; Metazoa - 223; Fungi - 83; Plants - 1477; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). )

HSP 1 Score: 58.2 bits (139), Expect = 1.4e-08
Identity = 24/30 (80.00%), Postives = 27/30 (90.00%), Query Frame = 0 

Query: 3  KKKKSGTVPVYLNVYDLTPINGYAYWLGLG 33
          +KK SGTVPVYLNVYDLTP+N Y YWLG+G
Sbjct: 10 RKKNSGTVPVYLNVYDLTPMNVYGYWLGIG 39

[Close]
BLAST of Spg035340 vs. TAIR 10
Match: AT1G80690.1 (PPPDE putative thiol peptidase family protein )

HSP 1 Score: 57.4 bits (137), Expect = 2.5e-08
Identity = 24/25 (96.00%), Postives = 24/25 (96.00%), Query Frame = 0 

Query: 8  GTVPVYLNVYDLTPINGYAYWLGLG 33
          G VPVYLNVYDLTPINGYAYWLGLG
Sbjct: 13 GNVPVYLNVYDLTPINGYAYWLGLG 37

[Close]
BLAST of Spg035340 vs. TAIR 10
Match: AT1G47740.1 (PPPDE putative thiol peptidase family protein )

HSP 1 Score: 51.6 bits (122), Expect = 1.4e-06
Identity = 21/25 (84.00%), Postives = 21/25 (84.00%), Query Frame = 0 

Query: 8  GTVPVYLNVYDLTPINGYAYWLGLG 33
          G  PVYLNVYDLTPINGY YW GLG
Sbjct: 67 GRAPVYLNVYDLTPINGYIYWAGLG 91

The following BLAST results are available for this feature:
BLAST of Spg035340 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0064599.11.0e-08100.00deSI-like protein [Cucumis melo var. makuwa] >TYK19991.1 deSI-like protein [Cucu... [more]
XP_038896454.11.0e-08100.00deSI-like protein At4g17486 isoform X2 [Benincasa hispida][more]
XP_004145512.11.0e-08100.00deSI-like protein At4g17486 [Cucumis sativus] >KGN55449.1 hypothetical protein C... [more]
KAG7024432.11.0e-08100.00DeSI-like protein [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022936663.11.0e-08100.00deSI-like protein At4g17486 [Cucurbita moschata][more]
BLAST of Spg035340 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q93VG84.7e-0462.96DeSI-like protein At4g17486 OS=Arabidopsis thaliana OX=3702 GN=At4g17486 PE=2 SV... [more]
BLAST of Spg035340 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7VGG15.0e-09100.00DeSI-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00... [more]
A0A6J1IMU95.0e-09100.00deSI-like protein At4g17486 OS=Cucurbita maxima OX=3661 GN=LOC111476656 PE=3 SV=... [more]
A0A0A0L3395.0e-09100.00PPPDE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G652130 PE=3 ... [more]
A0A6J1FDV35.0e-09100.00deSI-like protein At4g17486 OS=Cucurbita moschata OX=3662 GN=LOC111443190 PE=3 S... [more]
A0A1S3BVP45.0e-09100.00deSI-like protein At4g17486 OS=Cucumis melo OX=3656 GN=LOC103493768 PE=3 SV=1[more]
BLAST of Spg035340 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G25170.13.4e-1090.00PPPDE putative thiol peptidase family protein [more]
AT2G25190.15.0e-0975.00PPPDE putative thiol peptidase family protein [more]
AT4G31980.11.4e-0880.00unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247,... [more]
AT1G80690.12.5e-0896.00PPPDE putative thiol peptidase family protein [more]
AT1G47740.11.4e-0684.00PPPDE putative thiol peptidase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..292
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..170

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg035340.1Spg035340.1mRNA