Spg035338 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg035338
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold7: 25070932 .. 25072039 (-)
RNA-Seq Expression	Spg035338
Synteny	Spg035338

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAAACGAGAGCGATAAAAGAACGGGAGAATGAGGAGGAAGAGGTACCTGTTACCCCTGAAGTTCAGAAAGTTAAAGCGAAGAAGAAAAGAACCCCGGAGGAGAAAGAAGCCAAAAGGAGAAGACGACAACAGAGGGCTGAGGAACAAGAAAAGGCAACAGAGGTTGTTGTTGCTACAGTTGAAGAAGGAGACCCGCAAGAACCTGATGTACAGAACCCAGAGGAGGCTGAGCAGAGAGTCGCGGATACAGAAAAAGTTCAAGAAGAGCAAACAGAGGAAGTTCGAGAGAAAAATACTGGGGAAGTTCAAGAAGAAATTTCAGAAGAAGTGCAAGAAAAGTAGGCCGAGGATGTACAAATGCAACAGGCAGAAGATGTTCAGGTAACGGATAATGAGCCGGTGCAGGAGGCTCGAGTGGAGGTGATCATGCCAGAAGCACCGAAACGTCGCCGCATTAAAAGGAAAGCAGGTCGCGTTAGGGTTGCCCGAACTGATACTCCTTCGCCTCCAACCACGGATTCTGAAAGAGAGAATGCAGAGAGAGAAGAGTGTGAGAAGAAGGAAGCCGAAGAAAGAGCAAGAGAAGAGGCAGAGAAACAGGCTGAGGAAGAGCGGTTGCTCAAGCGAAGGGCGGAAAAGGGCAAAAGTGTTGCTGAAGCATCAGAAGAACACGATGAAATAGAAGAGCATGGTCGCTTCGTCAACAATTTTGCCAGAGCAAAATACGCTGAGCTGCTGAAAAGAGACTTCCTGTTTGAGAGAGGATTTAGCGGTAATCTTCCACATTTTCTAAGGACCGGCATTGCAGACCATGGCTGGGAGTTGTTTTGTGCGAAGCCTGAGTCTGTAAACGCACAGGTGGTGCGTGAATTTTATGCTAATATTGATAAAGAATGGTTTCCAGGTGATTGTTAGAGGAGTCGAGGTAGTCTGGAGTCCTAGTGCTATCAATGCACTGTATAACCTTCAGAATTTCCCCCATGCAGCTTATAATGAGATGGCTGTAGCGCCATCTAATGAGCAGTTAAGTGATGCTGTGCGGGAGGTGGGTATTGAAGGGGCACAGTGGCAGTTGTCCAAGACAGGGAGAAGGACATTTTAG

mRNA sequence

ATGGCGAAAACGAGAGCGATAAAAGAACGGGAGAATGAGGAGGAAGAGGTACCTGTTACCCCTGAAGTTCAGAAAGTTAAAGCGAAGAAGAAAAGAACCCCGGAGGAGAAAGAAGCCAAAAGGAGAAGACGACAACAGAGGGCTGAGGAACAAGAAAAGGCAACAGAGGTTGTTGTTGCTACAGTTGAAGAAGGAGACCCGCAAGAACCTGATGTACAGAACCCAGAGGAGGCTGAGCAGAGAGTCGCGGATACAGAAAAAGTTCAAGAAGAGCAAACAGAGGAAGCAGAAGATGTTCAGGTAACGGATAATGAGCCGGTGCAGGAGGCTCGAGTGGAGGTGATCATGCCAGAAGCACCGAAACGTCGCCGCATTAAAAGGAAAGCAGGTCGCGTTAGGGTTGCCCGAACTGATACTCCTTCGCCTCCAACCACGGATTCTGAAAGAGAGAATGCAGAGAGAGAAGAGTGTGAGAAGAAGGAAGCCGAAGAAAGAGCAAGAGAAGAGGCAGAGAAACAGGCTGAGGAAGAGCGGTTGCTCAAGCGAAGGGCGGAAAAGGGCAAAAGTGTTGCTGAAGCATCAGAAGAACACGATGAAATAGAAGAGCATGGTCGCTTCGTCAACAATTTTGCCAGAGCAAAATACGCTGAGCTGCTGAAAAGAGACTTCCTGTTTGAGAGAGGATTTAGCGGTAATCTTCCACATTTTCTAAGGACCGGCATTGCAGACCATGGCTGGGAGTTGTTTTGTGCGAAGCCTGAGTCTGTAAACGCACAGGTGGTGCGTGAATTTTATGCTAATATTGATAAAGAATGGTTTCCAGCTTATAATGAGATGGCTGTAGCGCCATCTAATGAGCAGTTAAGTGATGCTGTGCGGGAGGTGGGTATTGAAGGGGCACAGTGGCAGTTGTCCAAGACAGGGAGAAGGACATTTTAG

Coding sequence (CDS)

ATGGCGAAAACGAGAGCGATAAAAGAACGGGAGAATGAGGAGGAAGAGGTACCTGTTACCCCTGAAGTTCAGAAAGTTAAAGCGAAGAAGAAAAGAACCCCGGAGGAGAAAGAAGCCAAAAGGAGAAGACGACAACAGAGGGCTGAGGAACAAGAAAAGGCAACAGAGGTTGTTGTTGCTACAGTTGAAGAAGGAGACCCGCAAGAACCTGATGTACAGAACCCAGAGGAGGCTGAGCAGAGAGTCGCGGATACAGAAAAAGTTCAAGAAGAGCAAACAGAGGAAGCAGAAGATGTTCAGGTAACGGATAATGAGCCGGTGCAGGAGGCTCGAGTGGAGGTGATCATGCCAGAAGCACCGAAACGTCGCCGCATTAAAAGGAAAGCAGGTCGCGTTAGGGTTGCCCGAACTGATACTCCTTCGCCTCCAACCACGGATTCTGAAAGAGAGAATGCAGAGAGAGAAGAGTGTGAGAAGAAGGAAGCCGAAGAAAGAGCAAGAGAAGAGGCAGAGAAACAGGCTGAGGAAGAGCGGTTGCTCAAGCGAAGGGCGGAAAAGGGCAAAAGTGTTGCTGAAGCATCAGAAGAACACGATGAAATAGAAGAGCATGGTCGCTTCGTCAACAATTTTGCCAGAGCAAAATACGCTGAGCTGCTGAAAAGAGACTTCCTGTTTGAGAGAGGATTTAGCGGTAATCTTCCACATTTTCTAAGGACCGGCATTGCAGACCATGGCTGGGAGTTGTTTTGTGCGAAGCCTGAGTCTGTAAACGCACAGGTGGTGCGTGAATTTTATGCTAATATTGATAAAGAATGGTTTCCAGCTTATAATGAGATGGCTGTAGCGCCATCTAATGAGCAGTTAAGTGATGCTGTGCGGGAGGTGGGTATTGAAGGGGCACAGTGGCAGTTGTCCAAGACAGGGAGAAGGACATTTTAG

Protein sequence

MAKTRAIKERENEEEEVPVTPEVQKVKAKKKRTPEEKEAKRRRRQQRAEEQEKATEVVVATVEEGDPQEPDVQNPEEAEQRVADTEKVQEEQTEEAEDVQVTDNEPVQEARVEVIMPEAPKRRRIKRKAGRVRVARTDTPSPPTTDSERENAEREECEKKEAEERAREEAEKQAEEERLLKRRAEKGKSVAEASEEHDEIEEHGRFVNNFARAKYAELLKRDFLFERGFSGNLPHFLRTGIADHGWELFCAKPESVNAQVVREFYANIDKEWFPAYNEMAVAPSNEQLSDAVREVGIEGAQWQLSKTGRRTF

Homology

The following BLAST results are available for this feature:

BLAST of Spg035338 vs.


Match Name	E-value	Identity	Description

BLAST of Spg035338 vs.


Match Name	E-value	Identity	Description

BLAST of Spg035338 vs.


Match Name	E-value	Identity	Description

BLAST of Spg035338 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 145..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..176
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg035338.1	Spg035338.1	mRNA