Spg035290 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg035290
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description50S ribosomal protein L14, chloroplastic
Locationscaffold7: 23982175 .. 23986388 (+)
RNA-Seq ExpressionSpg035290
SyntenySpg035290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTATTCGAATCATAGGGGCTAGTAATCGACGATATGCTCATATTGGTGACGTTATTGTTGCTGTAATCAAGAAAGCCGTCCCAAATACACCTCTAGAAAGATCAGAAGTGATCAGAGCTGTAATTGTACGTACTTGTAAAGAACTCAAACGAGAAAACGGTATGATAATACGATATGATGACAATGCTGCGGTTGTTATTGATCAAGAAGGAAATCCAAAAGGAACTCGAATTTTTGGTGCAATTGCCCGAGAATTGAGACAGTTAAATTTCACTAAAATAATTTCATTAGCACCTGAAGTATTATAAGATAAGACCGTGAGATAGTTATAGTATTTGAATGAAATTAATTAGTAGATTGTGTATCACGTATATACCTTTTAAAATTAATAACTATTTAATTTAATAAAAAAGCATGTTGATTAGATAAAAATTCAAAGTAACCAATAATTTTTGTTTATCATGGGTAAGGACACTATTGCTAACATAATTGGGAACCACCACGTCAAGGCGACACTCTACCGCTGAGTTATATCCCTTCCCTTGCCCGCCCCTCTTTCTTATTATTAGTAAGATAGGGTTCCAGTACACAAACAAGGTGGGTTGGGGTTTCTTTCTCAATCTTTCTCTGATTCTAGCCGTGTAGCGGATCCGGCTTTAGTCGGTTAAAAAGAGGTGTGTGTGGCCGGGCTTCTTTCTTTATAGTGCAGCCCGCCCCCTTCTTCATTCATCCATTTAGGCCCGACTAGGAACACGTGGAGCCAGGTTCATCAAATGAGATAGAACTAACAAAAGAAAACTGCTTAGAATTAAAATTAAATAAGCTAACATATCAAAGTTATATGTACCAATTTTGGTACAAAGGATATCTAGAAGACCATCTAAAAAATAAGTGACCCAGATGTGTGCACTACTAAATAGGAGGGAAAGGATCTTCATGAAGTCTTCAAGAGACAAAATGGTTTAATCCCACCAAACACAAATATTATAAGGTAAACTCACAAAACAAACTATATTTTTACAAGCAACAAAATATTATAGTCACTGCTTCCTCCAAGAGATAGCTTTTATATATATATATATATATATTTATTTATTTATTTATTTATTTGAAGTTAATATTTATCAGTCATGTTACATAATTTGACCTCAAATATGTGTTCACTAGAATGTAGGTTAGACTAATAGGAATGTCTATAAAAGTCAAAATTATTTTTAAAAAAAAAAAAAAAAAAAAAGATTTTTGGAATAAGAACGACCCACGTGACCAATGAGAAAGATGGTAAAATTGTGACATCAACCACATACGAAAAAAGTGCTCTTGTTCAAATTCCAGTGACTGAGTGATTTAGAGTCTCTTTGAAATACATTTTAATTTAAATGTTTTTTAATAATGCATTTTTTAAAAACATTTTGTATAAAAATTGTTTAGAATTTAAACACTCATGTGTTTGGTTGCATTTTCTCGTAGGTGTTTTTATACACAAGTTATTGTATACTAAACACTATTTTAAAAAAAGTTGGTTTCAAGTGTGTTCTCCCAAAATGGTTTATTTATCAATCTCATTTTCTAACAAGTCATTTTTAGTGGTTGTCAAACACTAGAAATTTTTTCAAAATGATTTTTTTTTTCAAAATTAAACACTTGAAAAGTTAAACCAAACACACTCTTACTGCAATCAAGATGATTATAATTTATAATTGATTAACTAAAAGTATAAATTAGTGAGAAATAATTATTTAGTCAATACTCAGTAGATTGTAATTGGCTAATTAGAAAATTATTAACCAAACCATAATTTATCATTATTAAAAATTGATTTACTTAATATAGATATTTCATCTACAATTTTTGTAATGGGTTTCCTATACGGATGACCTAAATTTGTTGGCTAAATTGAGATATGACCTACTTTGTGAAGGTTAAGGTTAGGGGCAACAAGAAAAATGGCTAGATTTAATAGGGTGATTTGAAAAATGGCTAAACATGTTTAGAAATTAATAAATGGCTAAACGTAATTTTAATTAATAAATTTCTAATTGAAATAGACAAAATTGCCCCTAACCTATGTTTAGACTTTTTAGGAAGAGAAATACATCTAAATCAAAACAGAAAAAGAAAATCTAATTTTAACACCAGATTAACCAACTAAATCAAAATAGAAAAGGAAAATCTAATTTTAACAGACTAACCGACTAAATAAAAAAAAAATAAAAACAGAAACAACCTTTTAAGTGTAGAGAAACTGAATTTGACATCAAGATTTAACAACCTTGCATTAAATCTCTAAAATCATAATTAACATCGTTTAAAGAAAAAATCTAAATTCATAATCATGAAAAAAAAACTTATGTTGAAGTATCAATATACATTTTTTCGTACAAAATCACTTAATACTTATGTGTATATAATAACATATACATGGAAGCACAAAAGTATTTGTGTACAAATACACGATAAGTATAACAACATATATCTATATATGTTTATATACAAACAAGCATCATATTCAACGATCCTATCAATCGCTCGCATATGGATAATGGTATATATATCTATGAAGTCTCTATGTACCTAAGAGTATATACATATAATGAATACAGGAACTAAACATTACCCGGTTCTCGCCATCTTCCTTTGACAATGGATTCCCCATCATTTTCTGCTTTCTCTTTTTGTTTGTTCAATGGAGACTGGAAATTGATGATAATTATTGATGAAATATACTTGCTTGTAAAATGCTTTAAAACCTCATTTTGAGGACCCTGTTTACACAATCCAAAATTTTCTTGTAAGGATTGTTACTCAGTTACAACATGTATTTAACTATATACATTGGTGTAAAAACAACATCACTTACAACTGAATTAAGGACACAAACATCATCCTTCTTCGATTTGTATTTTTTAGTGGATTTGGTCCAACACTGCCTCTGTGTATATTGGTATCTACAGGCTCAACATCAACATCAACAACAAAGTCACTGTAATGTGTTGATATGTACACTTACATGAAATCCTTCCTCTGTTTGTTTGTGTTTTCCGTTGAATCCAGACTTGCACTGTCCTTTCGGATACTAGTAAACACACTTTCTTAGTGGATTTGGTCCAACACTGCCTCTATGTATATTGGTATCTACAGGCTCAACATCCACATCAACAACAAAGTCACTGTAATGTGTTGATATGTACACTTACATGAAATCCTTCCTCTGTTTGTTTGTGTTTTCCGTTGAATCCAGACTTGCACTGTCCTTTCGGATACTAGTAAACACACTTTCTTAGTGGATTTGGTCCAACACTGCCTCTATGTATATTGGTATCTACAGGCTCAACATCCACATCAACAACAAAGTCACTGTAATGTGTTGATATGTACACTTACATGAAATCCTTCCTCTGTTTGTTTGTGTTTTCCGTTGAATCCAGACTTGCACCGTCCCTTCGGATACTAGTATCCACACTTTCAGCATATACGACAAGGCAACAATCATGGTACATCTCGTTACATACCCCAGCGAGCATCCTGACAAGATCCATGTTCTAAAAAAACTTATAATCTGAAACTTGCCTTCACCATTATTGAAGAGGGAGATATGTAAAATTTTCTTTCAAGCATCAAGCCTAATAAGGTTTGTGCGAATTCAGTGAGATGAGAAAGGGTCGAGTCATGACTGGCTACCACTACGCTGCACTTGAAAATACTGTAGGAATTTTCCTCTCCCAAGCACTATCGTGCAAAGACAGTGGAGATGAAATCTGAATTCTGTAAATAAAGAAATGCAACATTCAGGCAAAGATTGGAATGTTAGTGTTGGGAGTGCGACCAAAGTCCCACATTGGCTAGATAAAGGGATGATCATGGGTATATAAGGGAGGACAAATAGCTCCATTGGTTTGAGGCCTTTTGGGGTGACCCAAAAGCAAAGCCATGAGGGTTTATGCCCAAAGTGGACAATATCATACCATTGTGGAGATATGAGTGTGTCTGGTAGTCCCTTACAATTGGTATCAGAGCCATGCCCCAAGATGGTAGCCGTGTCGGGTGGAATCCTCGGGTGCCGAACAAAGAAAAGTTGTGAGCCTTAATAGTCATGGTGGAGATCTGTGGTTGAGCTCTGGGCAGGCGGTATACTCTGGAGAAAGAGTTGTCCTGGATAAGAGCAAGAACTCTCGGTAAAGCGATGAAGCCTAGAGAATTAGACGGATAG

mRNA sequence

ATGTGTATTCGAATCATAGGGGCTAGTAATCGACGATATGCTCATATTGGTGACGTTATTGTTGCTGTAATCAAGAAAGCCGTCCCAAATACACCTCTAGAAAGATCAGAAGTGATCAGAGCTGTAATTGTACGTACTTGTAAAGAACTCAAACGAGAAAACGGTATGATAATACGATATGATGACAATGCTGCGGTTGTTATTGATCAAGAAGGAAATCCAAAAGGAACTCGAATTTTTGGTGCAATTGCCCGAGAATTGAGACATGAGATGAGAAAGGGTCGAGTCATGACTGGCTACCACTACGCTGCACTTGAAAATACTGCAAAGATTGGAATGTTAGTGTTGGGAGTGCGACCAAAGCGGTATACTCTGGAGAAAGAGTTGTCCTGGATAAGAGCAAGAACTCTCGGTAAAGCGATGAAGCCTAGAGAATTAGACGGATAG

Coding sequence (CDS)

ATGTGTATTCGAATCATAGGGGCTAGTAATCGACGATATGCTCATATTGGTGACGTTATTGTTGCTGTAATCAAGAAAGCCGTCCCAAATACACCTCTAGAAAGATCAGAAGTGATCAGAGCTGTAATTGTACGTACTTGTAAAGAACTCAAACGAGAAAACGGTATGATAATACGATATGATGACAATGCTGCGGTTGTTATTGATCAAGAAGGAAATCCAAAAGGAACTCGAATTTTTGGTGCAATTGCCCGAGAATTGAGACATGAGATGAGAAAGGGTCGAGTCATGACTGGCTACCACTACGCTGCACTTGAAAATACTGCAAAGATTGGAATGTTAGTGTTGGGAGTGCGACCAAAGCGGTATACTCTGGAGAAAGAGTTGTCCTGGATAAGAGCAAGAACTCTCGGTAAAGCGATGAAGCCTAGAGAATTAGACGGATAG

Protein sequence

MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELRHEMRKGRVMTGYHYAALENTAKIGMLVLGVRPKRYTLEKELSWIRARTLGKAMKPRELDG
Homology
[Close]
BLAST of Spg035290 vs. NCBI nr
Match: YP_009753040.1 (ribosomal protein L14 [Gerrardanthus macrorhizus] >QIT06112.1 ribosomal protein L14 [Gerrardanthus macrorhizus])

HSP 1 Score: 173.7 bits (439), Expect = 1.2e-39
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 

Query: 1   MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY 60
           MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY
Sbjct: 20  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY 79

Query: 61  DDNAAVVIDQEGNPKGTRIFGAIARELR 89
           DDNAAVVIDQEGNPKGTRIFGAIARELR
Sbjct: 80  DDNAAVVIDQEGNPKGTRIFGAIARELR 107

[Close]
BLAST of Spg035290 vs. NCBI nr
Match: AHM88831.1 (ribosomal protein L14, partial [Lagenaria siceraria] >AHM91189.1 ribosomal protein L14, partial [Lagenaria siceraria])

HSP 1 Score: 173.7 bits (439), Expect = 1.2e-39
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 

Query: 1   MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY 60
           MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY
Sbjct: 20  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY 79

Query: 61  DDNAAVVIDQEGNPKGTRIFGAIARELR 89
           DDNAAVVIDQEGNPKGTRIFGAIARELR
Sbjct: 80  DDNAAVVIDQEGNPKGTRIFGAIARELR 107

[Close]
BLAST of Spg035290 vs. NCBI nr
Match: YP_009751858.1 (ribosomal protein L14 [Indofevillea khasiana] >QIT04591.1 ribosomal protein L14 [Indofevillea khasiana] >QJS52359.1 ribosomal protein L14 [Indofevillea khasiana])

HSP 1 Score: 173.7 bits (439), Expect = 1.2e-39
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 

Query: 1   MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY 60
           MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY
Sbjct: 20  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY 79

Query: 61  DDNAAVVIDQEGNPKGTRIFGAIARELR 89
           DDNAAVVIDQEGNPKGTRIFGAIARELR
Sbjct: 80  DDNAAVVIDQEGNPKGTRIFGAIARELR 107

[Close]
BLAST of Spg035290 vs. NCBI nr
Match: YP_009753656.1 (ribosomal protein L14 [Trichosanthes wallichiana] >QIT04675.1 ribosomal protein L14 [Trichosanthes wallichiana])

HSP 1 Score: 173.7 bits (439), Expect = 1.2e-39
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 

Query: 1   MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY 60
           MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY
Sbjct: 20  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY 79

Query: 61  DDNAAVVIDQEGNPKGTRIFGAIARELR 89
           DDNAAVVIDQEGNPKGTRIFGAIARELR
Sbjct: 80  DDNAAVVIDQEGNPKGTRIFGAIARELR 107

[Close]
BLAST of Spg035290 vs. NCBI nr
Match: AHM91247.1 (ribosomal protein L14, partial [Lagenaria siceraria])

HSP 1 Score: 173.7 bits (439), Expect = 1.2e-39
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 

Query: 1   MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY 60
           MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY
Sbjct: 20  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY 79

Query: 61  DDNAAVVIDQEGNPKGTRIFGAIARELR 89
           DDNAAVVIDQEGNPKGTRIFGAIARELR
Sbjct: 80  DDNAAVVIDQEGNPKGTRIFGAIARELR 107

[Close]
BLAST of Spg035290 vs. ExPASy Swiss-Prot
Match: Q8WKP4 (50S ribosomal protein L14, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl14 PE=2 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.5e-42
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 

Query: 1   MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY 60
           MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY
Sbjct: 20  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY 79

Query: 61  DDNAAVVIDQEGNPKGTRIFGAIARELR 89
           DDNAAVVIDQEGNPKGTRIFGAIARELR
Sbjct: 80  DDNAAVVIDQEGNPKGTRIFGAIARELR 107

[Close]
BLAST of Spg035290 vs. ExPASy Swiss-Prot
Match: Q49KW2 (50S ribosomal protein L14, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=rpl14 PE=3 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 3.8e-41
Identity = 83/88 (94.32%), Postives = 88/88 (100.00%), Query Frame = 0 

Query: 1   MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY 60
           MCIRIIGASNRRYAHIGD+IVAVIK+A+PNTPLERSEVIRAVIVRTCKELKR+NGMIIRY
Sbjct: 20  MCIRIIGASNRRYAHIGDIIVAVIKEALPNTPLERSEVIRAVIVRTCKELKRDNGMIIRY 79

Query: 61  DDNAAVVIDQEGNPKGTRIFGAIARELR 89
           DDNAAVVIDQEGNPKGTR+FGAIARELR
Sbjct: 80  DDNAAVVIDQEGNPKGTRVFGAIARELR 107

[Close]
BLAST of Spg035290 vs. ExPASy Swiss-Prot
Match: Q7YJU2 (50S ribosomal protein L14, chloroplastic OS=Calycanthus floridus var. glaucus OX=212734 GN=rpl14 PE=3 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 6.5e-41
Identity = 84/88 (95.45%), Postives = 87/88 (98.86%), Query Frame = 0 

Query: 1   MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY 60
           MCIRIIGASNRRYAHIGDVIVAVIK+AVPN PLERSEVIRAVIVRTCKELKR+NGMIIRY
Sbjct: 20  MCIRIIGASNRRYAHIGDVIVAVIKEAVPNMPLERSEVIRAVIVRTCKELKRDNGMIIRY 79

Query: 61  DDNAAVVIDQEGNPKGTRIFGAIARELR 89
           DDNAAVVIDQEGNPKGTR+FGAIARELR
Sbjct: 80  DDNAAVVIDQEGNPKGTRVFGAIARELR 107

[Close]
BLAST of Spg035290 vs. ExPASy Swiss-Prot
Match: B1A971 (50S ribosomal protein L14, chloroplastic OS=Carica papaya OX=3649 GN=rpl14 PE=3 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 6.5e-41
Identity = 85/88 (96.59%), Postives = 86/88 (97.73%), Query Frame = 0 

Query: 1   MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY 60
           MCIRIIGASNRRYAHIGDVIVAVIK+AVPNTPLERSEVIRAVIVRTCKELKR NGMIIRY
Sbjct: 20  MCIRIIGASNRRYAHIGDVIVAVIKEAVPNTPLERSEVIRAVIVRTCKELKRNNGMIIRY 79

Query: 61  DDNAAVVIDQEGNPKGTRIFGAIARELR 89
           DDNAAVVIDQEGNPKGTRIFGAI RELR
Sbjct: 80  DDNAAVVIDQEGNPKGTRIFGAIPRELR 107

[Close]
BLAST of Spg035290 vs. ExPASy Swiss-Prot
Match: A0A372 (50S ribosomal protein L14, chloroplastic OS=Coffea arabica OX=13443 GN=rpl14 PE=3 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 6.5e-41
Identity = 84/88 (95.45%), Postives = 87/88 (98.86%), Query Frame = 0 

Query: 1   MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY 60
           MCIRIIGASNRRYAHIGDVIVAVIK+AVPN PLERSEV+RAVIVRTCKELKR+NGMIIRY
Sbjct: 20  MCIRIIGASNRRYAHIGDVIVAVIKEAVPNMPLERSEVVRAVIVRTCKELKRDNGMIIRY 79

Query: 61  DDNAAVVIDQEGNPKGTRIFGAIARELR 89
           DDNAAVVIDQEGNPKGTRIFGAIARELR
Sbjct: 80  DDNAAVVIDQEGNPKGTRIFGAIARELR 107

[Close]
BLAST of Spg035290 vs. ExPASy TrEMBL
Match: A0A218KG78 (50S ribosomal protein L14, chloroplastic OS=Cucumis sativus var. hardwickii OX=319220 GN=rpl14 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 5.7e-40
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 

Query: 1   MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY 60
           MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY
Sbjct: 20  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY 79

Query: 61  DDNAAVVIDQEGNPKGTRIFGAIARELR 89
           DDNAAVVIDQEGNPKGTRIFGAIARELR
Sbjct: 80  DDNAAVVIDQEGNPKGTRIFGAIARELR 107

[Close]
BLAST of Spg035290 vs. ExPASy TrEMBL
Match: G3ETT4 (50S ribosomal protein L14, chloroplastic OS=Cucumis melo subsp. melo OX=412675 GN=rpl14 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 5.7e-40
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 

Query: 1   MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY 60
           MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY
Sbjct: 20  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY 79

Query: 61  DDNAAVVIDQEGNPKGTRIFGAIARELR 89
           DDNAAVVIDQEGNPKGTRIFGAIARELR
Sbjct: 80  DDNAAVVIDQEGNPKGTRIFGAIARELR 107

[Close]
BLAST of Spg035290 vs. ExPASy TrEMBL
Match: A0A1X9Q175 (50S ribosomal protein L14, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl14 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 5.7e-40
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 

Query: 1   MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY 60
           MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY
Sbjct: 20  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY 79

Query: 61  DDNAAVVIDQEGNPKGTRIFGAIARELR 89
           DDNAAVVIDQEGNPKGTRIFGAIARELR
Sbjct: 80  DDNAAVVIDQEGNPKGTRIFGAIARELR 107

[Close]
BLAST of Spg035290 vs. ExPASy TrEMBL
Match: A0A1S4EU43 (50S ribosomal protein L14, chloroplastic OS=Cucumis melo OX=3656 GN=rpl14 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 5.7e-40
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 

Query: 1   MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY 60
           MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY
Sbjct: 20  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY 79

Query: 61  DDNAAVVIDQEGNPKGTRIFGAIARELR 89
           DDNAAVVIDQEGNPKGTRIFGAIARELR
Sbjct: 80  DDNAAVVIDQEGNPKGTRIFGAIARELR 107

[Close]
BLAST of Spg035290 vs. ExPASy TrEMBL
Match: A0A249RZI1 (50S ribosomal protein L14, chloroplastic OS=Cucumis melo var. cantalupensis OX=3658 GN=rpl14 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 5.7e-40
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 

Query: 1   MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY 60
           MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY
Sbjct: 20  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY 79

Query: 61  DDNAAVVIDQEGNPKGTRIFGAIARELR 89
           DDNAAVVIDQEGNPKGTRIFGAIARELR
Sbjct: 80  DDNAAVVIDQEGNPKGTRIFGAIARELR 107

[Close]
BLAST of Spg035290 vs. TAIR 10
Match: ATCG00780.1 (ribosomal protein L14 )

HSP 1 Score: 165.2 bits (417), Expect = 3.9e-41
Identity = 82/88 (93.18%), Postives = 85/88 (96.59%), Query Frame = 0 

Query: 1   MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY 60
           MCIRIIGASNRRYAHIGDVIVAVIK+A+PNTPLERSEVIRAVIVRTCKELKR NG IIRY
Sbjct: 20  MCIRIIGASNRRYAHIGDVIVAVIKEAIPNTPLERSEVIRAVIVRTCKELKRNNGTIIRY 79

Query: 61  DDNAAVVIDQEGNPKGTRIFGAIARELR 89
           DDNAAVVIDQEGNPKGTR+FGAI RELR
Sbjct: 80  DDNAAVVIDQEGNPKGTRVFGAIPRELR 107

[Close]
BLAST of Spg035290 vs. TAIR 10
Match: AT5G46160.1 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 67.8 bits (164), Expect = 8.5e-12
Identity = 37/110 (33.64%), Postives = 61/110 (55.45%), Query Frame = 0 

Query: 1   MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY 60
           MCI+ +    ++ A +GD IVA +K+A+PN  +++  V+  V+VR   +  R +G  +R+
Sbjct: 66  MCIQAL--KGKKGARLGDTIVASVKEAMPNGKVKKGAVVYGVVVRAAMQRGRVDGSEVRF 125

Query: 61  DDNAAVVIDQ-------EGNPKGTRIFGAIARELRHEMRKGRVMTGYHYA 104
           DDNA V++D        +  P GTR+FG +  ELR +     +    H A
Sbjct: 126 DDNAVVLVDSKDKNTKTDRQPIGTRVFGPVPHELRKKKHLKILALAQHVA 173

[Close]
BLAST of Spg035290 vs. TAIR 10
Match: AT5G46160.2 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 67.8 bits (164), Expect = 8.5e-12
Identity = 37/110 (33.64%), Postives = 61/110 (55.45%), Query Frame = 0 

Query: 1   MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRY 60
           MCI+ +    ++ A +GD IVA +K+A+PN  +++  V+  V+VR   +  R +G  +R+
Sbjct: 65  MCIQAL--KGKKGARLGDTIVASVKEAMPNGKVKKGAVVYGVVVRAAMQRGRVDGSEVRF 124

Query: 61  DDNAAVVIDQ-------EGNPKGTRIFGAIARELRHEMRKGRVMTGYHYA 104
           DDNA V++D        +  P GTR+FG +  ELR +     +    H A
Sbjct: 125 DDNAVVLVDSKDKNTKTDRQPIGTRVFGPVPHELRKKKHLKILALAQHVA 172

[Close]
BLAST of Spg035290 vs. TAIR 10
Match: AT1G04480.1 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 57.0 bits (136), Expect = 1.5e-08
Identity = 28/73 (38.36%), Postives = 49/73 (67.12%), Query Frame = 0 

Query: 14  AHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGN 73
           A +GD+++A +KK  P+    R +V+ AVIVR  K  +R++G+ + ++DNA V+++ +G 
Sbjct: 55  ACVGDMVMATVKKGKPDL---RKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGE 114

Query: 74  PKGTRIFGAIARE 87
            KG+ I G I +E
Sbjct: 115 MKGSAITGPIGKE 124

[Close]
BLAST of Spg035290 vs. TAIR 10
Match: AT2G33370.1 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 57.0 bits (136), Expect = 1.5e-08
Identity = 28/73 (38.36%), Postives = 49/73 (67.12%), Query Frame = 0 

Query: 14  AHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGN 73
           A +GD+++A +KK  P+    R +V+ AVIVR  K  +R++G+ + ++DNA V+++ +G 
Sbjct: 55  ACVGDMVMATVKKGKPDL---RKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGE 114

Query: 74  PKGTRIFGAIARE 87
            KG+ I G I +E
Sbjct: 115 MKGSAITGPIGKE 124

The following BLAST results are available for this feature:
BLAST of Spg035290 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_009753040.11.2e-39100.00ribosomal protein L14 [Gerrardanthus macrorhizus] >QIT06112.1 ribosomal protein ... [more]
AHM88831.11.2e-39100.00ribosomal protein L14, partial [Lagenaria siceraria] >AHM91189.1 ribosomal prote... [more]
YP_009751858.11.2e-39100.00ribosomal protein L14 [Indofevillea khasiana] >QIT04591.1 ribosomal protein L14 ... [more]
YP_009753656.11.2e-39100.00ribosomal protein L14 [Trichosanthes wallichiana] >QIT04675.1 ribosomal protein ... [more]
AHM91247.11.2e-39100.00ribosomal protein L14, partial [Lagenaria siceraria][more]
BLAST of Spg035290 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8WKP41.5e-42100.0050S ribosomal protein L14, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl14 PE=... [more]
Q49KW23.8e-4194.3250S ribosomal protein L14, chloroplastic OS=Eucalyptus globulus subsp. globulus ... [more]
Q7YJU26.5e-4195.4550S ribosomal protein L14, chloroplastic OS=Calycanthus floridus var. glaucus OX... [more]
B1A9716.5e-4196.5950S ribosomal protein L14, chloroplastic OS=Carica papaya OX=3649 GN=rpl14 PE=3 ... [more]
A0A3726.5e-4195.4550S ribosomal protein L14, chloroplastic OS=Coffea arabica OX=13443 GN=rpl14 PE=... [more]
BLAST of Spg035290 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A218KG785.7e-40100.0050S ribosomal protein L14, chloroplastic OS=Cucumis sativus var. hardwickii OX=3... [more]
G3ETT45.7e-40100.0050S ribosomal protein L14, chloroplastic OS=Cucumis melo subsp. melo OX=412675 G... [more]
A0A1X9Q1755.7e-40100.0050S ribosomal protein L14, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl14 PE=... [more]
A0A1S4EU435.7e-40100.0050S ribosomal protein L14, chloroplastic OS=Cucumis melo OX=3656 GN=rpl14 PE=3 S... [more]
A0A249RZI15.7e-40100.0050S ribosomal protein L14, chloroplastic OS=Cucumis melo var. cantalupensis OX=3... [more]
BLAST of Spg035290 vs. TAIR 10
Match NameE-valueIdentityDescription
ATCG00780.13.9e-4193.18ribosomal protein L14 [more]
AT5G46160.18.5e-1233.64Ribosomal protein L14p/L23e family protein [more]
AT5G46160.28.5e-1233.64Ribosomal protein L14p/L23e family protein [more]
AT1G04480.11.5e-0838.36Ribosomal protein L14p/L23e family protein [more]
AT2G33370.11.5e-0838.36Ribosomal protein L14p/L23e family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000218Ribosomal protein L14PSMARTSM01374Ribosomal_L14_2coord: 1..97
e-value: 4.3E-33
score: 125.9
IPR000218Ribosomal protein L14PPFAMPF00238Ribosomal_L14coord: 1..90
e-value: 3.7E-32
score: 110.9
IPR000218Ribosomal protein L14PPANTHERPTHR1176150S/60S RIBOSOMAL PROTEIN L14/L23coord: 1..89
IPR000218Ribosomal protein L14PHAMAPMF_01367Ribosomal_L14coord: 4..116
score: 12.791056
IPR005745Ribosomal protein L14P, bacterial-typeTIGRFAMTIGR01067TIGR01067coord: 1..90
e-value: 7.3E-34
score: 114.3
IPR036853Ribosomal protein L14 superfamilyGENE3D2.40.150.20Ribosomal protein L14coord: 1..98
e-value: 1.4E-35
score: 123.8
IPR036853Ribosomal protein L14 superfamilySUPERFAMILY50193Ribosomal protein L14coord: 1..90
NoneNo IPR availablePANTHERPTHR11761:SF28RIBOSOMAL PROTEIN L14B/L23E-RELATEDcoord: 1..89
IPR019972Ribosomal protein L14P, conserved sitePROSITEPS00049RIBOSOMAL_L14coord: 41..67

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg035290.1Spg035290.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0009507 chloroplast
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome