Spg035203 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg035203
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Locationscaffold4: 23697530 .. 23701052 (+)
RNA-Seq ExpressionSpg035203
SyntenySpg035203
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGAGAGAACAAGTACAGACAGCGAGGTAAGCAAGTTCAAATCTGAACTGTCTGAGCTTAGATCTCTCATTAGTACGTTGGCTGCAGAGAAGGAATCCCCATCTGAACGGAGTACATATGAAGGATTTCCAGAACAATCAAAGCCTAAATATGCAGCATGGATTGAGTTCAGGTATTTTAGAATTTTTGGTTAAAAATTTATATGATGGCATTCGAGTTTTACAGGAAGGTCAACTCAAATTCCAAGAGGAGGCCATAGCCGGGATGTAGCAATTGGGAGCCCAAGTTCCTCTCAATTGGCTGACACTGTCAGAAAATTGGAAACCAAAATTGACAAACTACCTGCTCATCCTAGTCCACAATTCCCTTCTTCGTTTGCATTTGAAAAGAATAGAGAGGCAAAGAAGCCTGAAGAGAAGACAAGCAATCTCAACTTTCCAAAGAAGCGAGGGGTACGTTTCGATCCTCCTATTGATTTTAATTCTTATGTTCCTAAAGCTCCTTTTCCTAGCAGGTTAGCGCTACAACCTGAACCTCCCAAGGAAGAGGAAGAGAAGGACATACTTAACCCATTCAAGAAGGTAGATGTCAACATCCCTCTTCTGGACGCCATAAAGCAAATTCCTAAGGTAGGAAAATTTTTAAAGAAATGGTGCTCCAAGAAAGGTAAACCTGAGGTATGCAAAAATGTTTCTGTCATCTTGAAAAAGTCACCTAACGAGTGTTTAGATCATGGCATCTATACCTTGCCATGCATTCTAGGGGATTTAGAAATTAAGCATGCCATGTTAGATTTAGGATCCTCTATTAATGTCATGTCTCATGCACTCGCTAATGAGCTTAATCTTTCCCATATTAAGAAAACTAGTAATTTGATTCAATTGGTAGATAGATCTTTAATTAGACCTCTAGGGCTTTATGAGAATGTGTTAGTTAAGCTAGATGAGCTTATATTTCCTTCAGACTTCCTTATAATTGATATCCATGAAAATGGTTCACCTAATGCCACATCTATAATTTTGGGTCGTCCATTCATGAAAACGACCAAGGTTAAAATGAATTTAGGCAAGGGAATCATTTCTGTTGAGTTTAATGGAAAAAGAAGTTGCTTTATTTCTGAAATTTTAGGTCACCTTAACCCTTCTCAGACCTGTTCAAATATTTCCCATAAGATACAGGTAAACAGGTACAATGTGTAAACCCGAGACTTTCCTTGGATCATTTCCTCTTGTCATCTATTGTGGTTTCATGGTTGGATTAAAATTGGTTGGAAGTTATTAATTTAAAAAGAAAAAGAAATGGGAAAGGAAAGAAAACCAAAAAAAAAAAAAAAAGAAAGGAGATGGGAAAAGACAGCAAGCAGTGGTTTAAAACCCACCACCGACAGCCTTCTTTACCAGCCCATTACCAGCCATTTTTCCATCATTTTCCATCCAAATTTCAGAGCACTTTAGGGAGAGTGAGGGAAGAAGAAGAAGAAGAATTTCGTGGTTTTGAGGTTGAAGAAGATAGCAAAAAGCTCATGCAAAGCCAGCCATAGCAGAATCTGAGTTCAACCTGTCAACCTCTGGTTTTTTATTCGGTTTGAGCTACACAGAAGGAAATAAGAGGTGAGGTTTGATTTTCTTGAAAGTTAGTTCCTTTTCTAACATATTTCATGAAGGAAGCTTGAGCTAAATCGTATGAGAAGTTAATGGTTTTTGGAATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGTTTCCTCTGGTGTTTCGAGCATTCTGGGTTGTACAAGTTGAATCAGAAGCTCAATTTGGTATGGTTGGAAAGCTTATTCAATTTCCTACAACTCTCATGAAGAATTCGTGTGCCAAAAATGACTTGAAGTAGATTTAATGTCAGGAGAAAGATAAAGGGTAGCAGAGAAGCTCAAATCTGTGTTGTCTGTGTTCGGGGCGTTTCTGGGAAAATTGGTTGGGAATCTCGTTTTCATTTCTTCATGTAAGTTGTAGAGTGTTCGAAAATGAAGAGTTTGATGTTATTACATTAATTTTGGTTAAGTATTGAGGAAGTTATAGGTATTGGAAGTTAGGGTATAGAATCTGGAAAATCTGGAAAGTAGAATGTGAATGTGATTTTTAATTCAATTGTTTAGAAATTCATGAGCATGGAAAGACAAAGCTATCTATGGATCTAATGCTCGGTTTTGGTTGTTTGACAGGCCAAGAGGAAATAGGTCAAGTCTACAGACCAGGAAACTAGCTAAGACTGTGAGTGACAAAATGAATTTCGAAAATTTTCCAACGGTTGTTCATGTTTAGACGTTTTATATGCTTTTCTATGAATGATACATGATTTCTATGAACGGTTTCAAGCATAAGTTTTGAGCTTAGATTTTCTAATGAGGTTTATATACGAGCACGTGGTTAATGACTTTATGACAAGTAGTTGAAACGATATCTTTTAAAGTAAAGTATGTATGAGCAAGTATTTTTTTTTTAAGATTTTCAGTTTTTTCACGAGCAAGCTGAGTACACTTAAGTTTAACGAAAGATAACGATAAGCAGGCATGTTCTAATGTTTTCATGTGATTTTCTGAGATTTCTATTGACTACATGACTGAGGTATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACGACAAAGACAATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTAGTTGTACTGGGTGTGCCCTACACAACGTAGATCAGTCATGTTAGTTAAAATGATTGATGTACTTGATATGCCTTGCTAGATATTTAATAACGTACTTGCGAGTTATTTGAGAAAGCTTTTATCATTACACATTTATGTTAAACGCTTGATTGAACAGATTTATACGCTTAAAGGTTTATCACGTGTTCCGATTTGCAAATCTACAGTTTTTAAAGCTAGTCACTCACTGGGCTTCATAGCTCATTCTTTCAAAATGTTTTTCCACTTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGAACAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTTCATATTGTAAATGTTTTGTAAGGATTGGATAATATCGTCCTAGACGTCGTGGTTGTATAAACCCTAGTTGTATATGTTTTTGGTTGCGATATCTATATTAGGTTATTATCCGAACCAAGTTATGTCAGGGCGGCACCTCGTGTTTGTTGAAAGTTTTTTTTCAGGGATTCCGCTATGTTGTGTTTCATGTAGAATGTTTTATATCTATGATTAGTATGTTTATCAGGTTCAGCGTTCAGGAGGGTCAGCAGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTTCGGGCTAAGCTAGCAGGTGGTCCAGGAGGCGGTGTGACAATTTGGTATCAGAGCAGTTAG

mRNA sequence

ATGGCTGAGAGAACAAGTACAGACAGCGAGGTAAGCAAGTTCAAATCTGAACTGTCTGAGCTTAGATCTCTCATTAGTACGTTGGCTGCAGAGAAGGAATCCCCATCTGAACGGAGTACATATGAAGGATTTCCAGAACAATCAAAGCCTAAATATGCAGCATGGATTGAGTTCAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGTTTCCTCTGGTGTTTCGAGCATTCTGGGTTGTACAAGTTGAATCAGAAGCTCAATTTGGTTATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGAACAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTTCATATTGTAAATGTTTTGTTCAGCGTTCAGGAGGGTCAGCAGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTTCGGGCTAAGCTAGCAGGTGGTCCAGGAGGCGGTGTGACAATTTGGTATCAGAGCAGTTAG

Coding sequence (CDS)

ATGGCTGAGAGAACAAGTACAGACAGCGAGGTAAGCAAGTTCAAATCTGAACTGTCTGAGCTTAGATCTCTCATTAGTACGTTGGCTGCAGAGAAGGAATCCCCATCTGAACGGAGTACATATGAAGGATTTCCAGAACAATCAAAGCCTAAATATGCAGCATGGATTGAGTTCAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGTTTCCTCTGGTGTTTCGAGCATTCTGGGTTGTACAAGTTGAATCAGAAGCTCAATTTGGTTATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGAACAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTTCATATTGTAAATGTTTTGTTCAGCGTTCAGGAGGGTCAGCAGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTTCGGGCTAAGCTAGCAGGTGGTCCAGGAGGCGGTGTGACAATTTGGTATCAGAGCAGTTAG

Protein sequence

MAERTSTDSEVSKFKSELSELRSLISTLAAEKESPSERSTYEGFPEQSKPKYAAWIEFRAQDFRAKQEDLWFPLVFRAFWVVQVESEAQFGYIPLLTLSVLRDNDAVVEIELPVPDTLPTSAESSRTSSSTWVELYIESVHIVNVLFSVQEGQQVSLEEDDVRWLHAIFRAKLAGGPGGGVTIWYQSS
Homology
[Close]
BLAST of Spg035203 vs. NCBI nr
Match: KAA0042035.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 124.0 bits (310), Expect = 1.4e-24
Identity = 73/160 (45.62%), Postives = 95/160 (59.38%), Query Frame = 0 

Query: 46   EQSKPKYAAW---IEFRAQDFRAKQEDLWFPLVFRAFWVVQVESEAQFGYI---PLLTLS 105
            EQ   K ++W   + F  ++ R   +   F + +    +++V    Q  Y+    L TLS
Sbjct: 1362 EQVFLKLSSWRGVLRFERKEHRISSKPGGFMVFYDTLSILEVHKSNQKLYLVIFSLSTLS 1421

Query: 106  VLRDNDAVVEIELPVPDTLPTSAESSRTSSSTWVELYIESVHIVNVLFSVQEGQQ----- 165
            VLRDNDAVVEIELPVPDTLPTSAES  ++SSTW+ELY ESVH+    +   +G       
Sbjct: 1422 VLRDNDAVVEIELPVPDTLPTSAESLESNSSTWLELYFESVHVEMFCYFTNQGMSGLHLM 1481

Query: 166  ------VSLEEDDVRWLHAIFRAKLAGGPGGGVTIWYQSS 189
                    +  DDV WLHA+FRAK AGGPGGGVT + Q+S
Sbjct: 1482 LNVGSVGIVRGDDVCWLHAVFRAKTAGGPGGGVTFYVQAS 1521

[Close]
BLAST of Spg035203 vs. NCBI nr
Match: TYK17971.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 124.0 bits (310), Expect = 1.4e-24
Identity = 73/160 (45.62%), Postives = 95/160 (59.38%), Query Frame = 0 

Query: 46   EQSKPKYAAW---IEFRAQDFRAKQEDLWFPLVFRAFWVVQVESEAQFGYI---PLLTLS 105
            EQ   K ++W   + F  ++ R   +   F + +    +++V    Q  Y+    L TLS
Sbjct: 1362 EQVFLKLSSWRGVLRFERKEHRISSKPGGFMVFYDTLSILEVHKSNQKLYLVIFSLSTLS 1421

Query: 106  VLRDNDAVVEIELPVPDTLPTSAESSRTSSSTWVELYIESVHIVNVLFSVQEGQQ----- 165
            VLRDNDAVVEIELPVPDTLPTSAES  ++SSTW+ELY ESVH+    +   +G       
Sbjct: 1422 VLRDNDAVVEIELPVPDTLPTSAESLESNSSTWLELYFESVHVEMFCYFTNQGMSGLHLM 1481

Query: 166  ------VSLEEDDVRWLHAIFRAKLAGGPGGGVTIWYQSS 189
                    +  DDV WLHA+FRAK AGGPGGGVT + Q+S
Sbjct: 1482 LNVGSVGIVRGDDVCWLHAVFRAKTAGGPGGGVTFYVQAS 1521

[Close]
BLAST of Spg035203 vs. NCBI nr
Match: KAA0062409.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 124.0 bits (310), Expect = 1.4e-24
Identity = 65/102 (63.73%), Postives = 75/102 (73.53%), Query Frame = 0 

Query: 94  PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI----------- 153
           PL TLSVLRDNDAVVEIELPVPDTLPTSAESS ++SSTW+ELY ESVH+           
Sbjct: 80  PLSTLSVLRDNDAVVEIELPVPDTLPTSAESSESNSSTWLELYFESVHVEMFCYFTNQVM 139

Query: 154 --VNVLFSVQEGQQVSLEEDDVRWLHAIFRAKLAGGPGGGVT 183
             ++++FSV  G    +  DDV WLHA+FRAK  GGPGGGVT
Sbjct: 140 SRLHLVFSVLVGSTGIVRGDDVCWLHAVFRAKTVGGPGGGVT 181

[Close]
BLAST of Spg035203 vs. NCBI nr
Match: TYK26572.1 (putative Retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 124.0 bits (310), Expect = 1.4e-24
Identity = 65/102 (63.73%), Postives = 75/102 (73.53%), Query Frame = 0 

Query: 94  PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI----------- 153
           PL TLSVLRDNDAVVEIELPVPDTLPTSAESS ++SSTW+ELY ESVH+           
Sbjct: 80  PLSTLSVLRDNDAVVEIELPVPDTLPTSAESSESNSSTWLELYFESVHVEMFCYFTNQVM 139

Query: 154 --VNVLFSVQEGQQVSLEEDDVRWLHAIFRAKLAGGPGGGVT 183
             ++++FSV  G    +  DDV WLHA+FRAK  GGPGGGVT
Sbjct: 140 SRLHLVFSVLVGSTGIVRGDDVCWLHAVFRAKTVGGPGGGVT 181

[Close]
BLAST of Spg035203 vs. NCBI nr
Match: TYK25935.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 121.3 bits (303), Expect = 8.8e-24
Identity = 63/99 (63.64%), Postives = 73/99 (73.74%), Query Frame = 0 

Query: 94  PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSRTSSSTWVELYIESVHIVNVLFSVQEGQ 153
           PL TLSVLRDNDAVVEIELP+PDTLPTSAESS ++SSTW+ELY ESVH+  + +   + +
Sbjct: 322 PLSTLSVLRDNDAVVEIELPLPDTLPTSAESSGSNSSTWLELYFESVHVEMLFYKPSDAR 381

Query: 154 QVS----------LEEDDVRWLHAIFRAKLAGGPGGGVT 183
             S          +  DDV WLHAIFRAK AGGPGGGVT
Sbjct: 382 AASYVCWEGSAGIVRGDDVCWLHAIFRAKTAGGPGGGVT 420

[Close]
BLAST of Spg035203 vs. ExPASy TrEMBL
Match: A0A5A7TKT0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G004880 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 6.6e-25
Identity = 73/160 (45.62%), Postives = 95/160 (59.38%), Query Frame = 0 

Query: 46   EQSKPKYAAW---IEFRAQDFRAKQEDLWFPLVFRAFWVVQVESEAQFGYI---PLLTLS 105
            EQ   K ++W   + F  ++ R   +   F + +    +++V    Q  Y+    L TLS
Sbjct: 1362 EQVFLKLSSWRGVLRFERKEHRISSKPGGFMVFYDTLSILEVHKSNQKLYLVIFSLSTLS 1421

Query: 106  VLRDNDAVVEIELPVPDTLPTSAESSRTSSSTWVELYIESVHIVNVLFSVQEGQQ----- 165
            VLRDNDAVVEIELPVPDTLPTSAES  ++SSTW+ELY ESVH+    +   +G       
Sbjct: 1422 VLRDNDAVVEIELPVPDTLPTSAESLESNSSTWLELYFESVHVEMFCYFTNQGMSGLHLM 1481

Query: 166  ------VSLEEDDVRWLHAIFRAKLAGGPGGGVTIWYQSS 189
                    +  DDV WLHA+FRAK AGGPGGGVT + Q+S
Sbjct: 1482 LNVGSVGIVRGDDVCWLHAVFRAKTAGGPGGGVTFYVQAS 1521

[Close]
BLAST of Spg035203 vs. ExPASy TrEMBL
Match: A0A5D3D150 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002770 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 6.6e-25
Identity = 73/160 (45.62%), Postives = 95/160 (59.38%), Query Frame = 0 

Query: 46   EQSKPKYAAW---IEFRAQDFRAKQEDLWFPLVFRAFWVVQVESEAQFGYI---PLLTLS 105
            EQ   K ++W   + F  ++ R   +   F + +    +++V    Q  Y+    L TLS
Sbjct: 1362 EQVFLKLSSWRGVLRFERKEHRISSKPGGFMVFYDTLSILEVHKSNQKLYLVIFSLSTLS 1421

Query: 106  VLRDNDAVVEIELPVPDTLPTSAESSRTSSSTWVELYIESVHIVNVLFSVQEGQQ----- 165
            VLRDNDAVVEIELPVPDTLPTSAES  ++SSTW+ELY ESVH+    +   +G       
Sbjct: 1422 VLRDNDAVVEIELPVPDTLPTSAESLESNSSTWLELYFESVHVEMFCYFTNQGMSGLHLM 1481

Query: 166  ------VSLEEDDVRWLHAIFRAKLAGGPGGGVTIWYQSS 189
                    +  DDV WLHA+FRAK AGGPGGGVT + Q+S
Sbjct: 1482 LNVGSVGIVRGDDVCWLHAVFRAKTAGGPGGGVTFYVQAS 1521

[Close]
BLAST of Spg035203 vs. ExPASy TrEMBL
Match: A0A5A7V9N3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G002110 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 6.6e-25
Identity = 65/102 (63.73%), Postives = 75/102 (73.53%), Query Frame = 0 

Query: 94  PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI----------- 153
           PL TLSVLRDNDAVVEIELPVPDTLPTSAESS ++SSTW+ELY ESVH+           
Sbjct: 80  PLSTLSVLRDNDAVVEIELPVPDTLPTSAESSESNSSTWLELYFESVHVEMFCYFTNQVM 139

Query: 154 --VNVLFSVQEGQQVSLEEDDVRWLHAIFRAKLAGGPGGGVT 183
             ++++FSV  G    +  DDV WLHA+FRAK  GGPGGGVT
Sbjct: 140 SRLHLVFSVLVGSTGIVRGDDVCWLHAVFRAKTVGGPGGGVT 181

[Close]
BLAST of Spg035203 vs. ExPASy TrEMBL
Match: A0A5D3DSY7 (Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G001810 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 6.6e-25
Identity = 65/102 (63.73%), Postives = 75/102 (73.53%), Query Frame = 0 

Query: 94  PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI----------- 153
           PL TLSVLRDNDAVVEIELPVPDTLPTSAESS ++SSTW+ELY ESVH+           
Sbjct: 80  PLSTLSVLRDNDAVVEIELPVPDTLPTSAESSESNSSTWLELYFESVHVEMFCYFTNQVM 139

Query: 154 --VNVLFSVQEGQQVSLEEDDVRWLHAIFRAKLAGGPGGGVT 183
             ++++FSV  G    +  DDV WLHA+FRAK  GGPGGGVT
Sbjct: 140 SRLHLVFSVLVGSTGIVRGDDVCWLHAVFRAKTVGGPGGGVT 181

[Close]
BLAST of Spg035203 vs. ExPASy TrEMBL
Match: A0A5A7T9P7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1164G00060 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 4.3e-24
Identity = 63/99 (63.64%), Postives = 73/99 (73.74%), Query Frame = 0 

Query: 94  PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSRTSSSTWVELYIESVHIVNVLFSVQEGQ 153
           PL TLSVLRDNDAVVEIELP+PDTLPTSAESS ++SSTW+ELY ESVH+  + +   + +
Sbjct: 322 PLSTLSVLRDNDAVVEIELPLPDTLPTSAESSGSNSSTWLELYFESVHVEMLFYKPSDAR 381

Query: 154 QVS----------LEEDDVRWLHAIFRAKLAGGPGGGVT 183
             S          +  DDV WLHAIFRAK AGGPGGGVT
Sbjct: 382 AASYVCWEGSAGIVRGDDVCWLHAIFRAKTAGGPGGGVT 420

The following BLAST results are available for this feature:
BLAST of Spg035203 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0042035.11.4e-2445.63DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa][more]
TYK17971.11.4e-2445.63DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa][more]
KAA0062409.11.4e-2463.73reverse transcriptase [Cucumis melo var. makuwa][more]
TYK26572.11.4e-2463.73putative Retrotransposon protein [Cucumis melo var. makuwa][more]
TYK25935.18.8e-2463.64gag/pol protein [Cucumis melo var. makuwa][more]
BLAST of Spg035203 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg035203 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TKT06.6e-2545.63Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67... [more]
A0A5D3D1506.6e-2545.63Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold30... [more]
A0A5A7V9N36.6e-2563.73Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold15... [more]
A0A5D3DSY76.6e-2563.73Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A5A7T9P74.3e-2463.64Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1164G000... [more]
BLAST of Spg035203 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg035203.1Spg035203.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006259 DNA metabolic process
molecular_function GO:0005488 binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0016779 nucleotidyltransferase activity