Spg035174 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg035174
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotransposon gag protein
Locationscaffold4: 24193253 .. 24197801 (+)
RNA-Seq ExpressionSpg035174
SyntenySpg035174
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGAATAAATTCTTCTCCAAAACTTTCCACAAAAAGGAAAAAGGAAACTTTGTGACTTCCTACTGCATCGACGTAGAAGAAGTTGACAATTCTGAGAAGGGTGAACAAAGGACCTCCATCTTCGATCGCATCAAGCCTCCAACTACTTGTCCTTCAGTATTCCAAAGAATGAGTATGGTCGCGACAGAAGAAGAAAATCAATGTTCGGTGTCCACCTCCGTTCGACCTTCAACTTTCCAAAGGCTAAGTGTCTCCGCATCGAAGAAAAGTCGACCTTCAACATCTGTTTTTGATCGCCTCAAAGTAACAAACGATCAACCAAAAAGAAAGATGGACAACTTGGAGTTGAAACTTTTCGATGAAGTAAACAGCGGCGAGAAGCTTCATAGTAGCATCCTGTCACGTATGAAGATGAAGTTTTCTGTTCTCATAAATACGGAAGGTTCCTTGAAGGTGAAGCCAAATCTCATTATCTTGACCAGTCCTATAAATGAAGGATCTGATCAAGACAATGATGAAGATAAGAGCTTTTAAAATGTAAAAGCTCCTTATCGCAAGAGCCTAAATTGCATGATGCTCCTAGCCCACACGAGCTTAAAAGGTGAGTGCAAAAAATTCTGAACTACGTTATGACTTGATCCCTATTTCTCAAGGGTACGTAGGCAGCTTAAAGAAACTTTAAGTTCAGTCTCTACAAATAAAAAAAGAAAGTGCAACAAATATTGAAGCACGACAATATAAATTGAGGAAATTCATCACTAGTGGGGGCAACACAGCAAATGGAAGTTGTGCACCGTTATGAATGTGAAACTATGAGTTTGATGAATAAAAGAAGACTTCATTCCTCCAAATTTGATGTCTCGCTCGCCTCAAGTTCGGTGTTCCGCTCACCCTAAGTTCGTTGTTCCCTCTTCCTCAAGTTTGAAAGTTCTTACACTATACGTTGTTGCGTTGTTCTTTCTCCAAGTTCGAGGTTTCTTACGTGGCACGTTACGGCGTTGTTCCTTCTCCGAGTTTGAAGGTTCTCACGTTGCGCTGCTTTGCTATTCCTTCTCCAAGTTCGAAGCTTCTCACGCTGCGCTGCTTCCTTCTCCAAGTTCGAAGGTTCTCCGCTGCACGCTTCTGCGTTGCTCCTTCTCCAAGTTCGAAGGTTTGCACGTGTTGTTATGCTGCTTCGCTGTTGTTCCCTCTCCAAGTTCGAAGGTTCCCACGCTGCGCTGTTGTGTTACTTCCGTCTCCAACTTCAAGGTTGTCAAGTGCTACGCTATTTCGCAGTTCCTTCTCTCCAAGTTCGAAGGTTCTCACGCGTTTCGCTGCGGTTCCTTCTCTCCAAGTTCGAGGGTTCTTACGTTATACGCTACTGCATTGTTCTTTCTCCAAGCTCGAAGGTTCTCCACTGCACGCTCCTGCGTTGCTCCTTCTCCAAGTTTGAAGGTTTGCACGTGTTGTTATGTTGCTTCGCTGTTGTTCCTTCTCCAAGTTTGAAGGTTCTCACATTGTGCTGTTGCATTGCTTTCTTCTCCAAGTTCGAAGGTTCCCACGTTGTGCTGTTGTGCTGCTTTCTTCTCCAAATTCGAAGGTTCTCGAGTGCTACGCTGTTGCGTTGCTTCCTTCTCCAAGTTCGAAGGTTCCCACGCTGCACTGTTGTGCTGCTTCCTTCTCCAACTTCAAGGTTGTCAAGTGCTACGCTGGTTCGCAGTTTCTTCTCTCCAAGTTCGAAGGTTCTCATGCGCTTTGCTGAAGTTTCTTCTCTCCAAGTTCAAAGGATTTTACGCGTTTTGTTGCAGTTCCTTCTCTCCAAGTTTGAAGGTTTTCATGCGCTTTGTTGAAGTTCATTCTCTCCAAGTTTGAAGGTTCTCACGCGCTTCGTTGTAGTTCCTTCTCTCCAAGTTCAAAGACTCTCACATTGCTTCACTTCAATTCCTTCTCCAAGTTCGAAGGTTCTCACGCGCTTTGTTGTAGTTCCTTCTCTCCAAGTTTGAAGGTTCTCATGCTGTTTCGCTGATGTTCCTTCTTCAAGTTTGAAACTTTTCTCCAAGTTTGAAGATTCTCATGCACTTCGCTGCAGTTCCTTCTCTCCAAGTTTGAAGGTTCTCACACGCTTCGCTACAGTTCCTTATCCAAGTTCGAAGGTGTTGGGTTTAATGTCCTATAAACTCGTAGTTTGTAAATCATTAAACATATTTCTATTTCCAATAAAGTCGTTATTGAGGTTATTCAGTAAAAGATGTTATTGAATATGTAAATTGCGAATGATTAACCTAAATCCAATAAACTAAGATCCTTGGCTATAAAATGAATGCTCAAACTATATGTAGGGACATATCGTAGGATCAAGTTCAAGTTTATAGTCAAAATAGTCTATAGTATAAGGATACGGTTGGGTGCCTTATCCTGGGGACACTATGGACGCGGCCCACTTTGTATTAAGTACAAACGATGAGATCCTAAATCGCTCATGTGGAGACATGCGAGTGGGGGCGTCCTATGCAATGAGTTTGCATAAGACTGGACCACGAAATTAGTCACTTTCTCTTTATAACGCCGTTTACTGAAGAAACTGACTATTTCTTAAAGATGACCTAGGTAACTCGTTCTTAATCCTAAGCTAACTATGAACTTCTGTTTATACGACATTATCCTTTGATCTGCATGGGTGAGAGTGGCCAGCATCGCCGACTCCACAAGCCTACCATTTTGAGGATAAGATCGAATAGATAGTTGGGGACGTAGTCTCGCAAGACGGAATTCGCTCCTACCCATTTCAGGGATAGTAGAGAGGTTGTTCCCTTAAGTACTAACTCCAGGACTTGAACAAGGGGCCCCACCCTCTCGTTGGATCGAGAGGGACTTAGGTTTGATGGTTGGACCACAAACCGATTGTTCATTAGAGGATTAGTGGAACTTAAGGAACAAGAAGTATTACAGGGGTAAAATGGTCATTTGACCTAGCTATAGTTACGAACAACCTGTGAAGGAATGACTTACTGAACATGGTTAAATCAAGTGGACGGAAATATATCTATAGTGAGGGGAGTGCAACTATCAGGCTATAGTGGAGTGTCCCGGTAGTTAACGAATGTTGGCTAGCTTAGATAATGAGATTAGTCGGTTAGCCTCGAATCATTGGAGCCCATGATATATAGGTCCATTAGGTCCCCCTACTAGCTCATATCGGATTAAAGCCTAGAACATATTGATAGGATTCTTTGAATCGTTCAAAATCGGAAAAAAAGAGTATTATCGTAAAATTGTGTTTGACACAATTATTTAATTATGAATTAAATTAGAAAATGAGAGATAAAGAATTTAAAAGTGTTTTAAATACAATATATATGGATTAAGAATCATATATAATGAATGGCACAAGGTGACAATGATTAATTGGATTAATCATATCAAATTACTTGGAAATGTCCCAAATTAATTTCCTAGAAATCAATTTCAATTTAGGATTGAAATAAGAGTGAATTGCAAGCTGAAAATTCTGAATATAGATTCAATTTAGTGGATTTAGTGGGATTCCCACTCTTGCATGTTGATGCATAGTGGAAAACAACACAACCATGCACTAGTTGCATGTGTTGTGAATTAAACACCTAGAATCCACTTTGAGTTGCAATTTCACCATGTGTCTAGTGTCATGAGGCTTCTCTTTGCATTGAAGATGTCTATATAAGGAGCATGTATCAGATTCAAAGGGGAGAGAGTGATTTACTTACTGTTATGTTGTTGGAATTTACTCTCAAATTCACTTACCTCCATAGATCTCTCAAGTGCATGTACCTTCAAGCATTCCCTTCCCATTCCCTATCTCTATAAGACTCCCACAAGTCGTTCTTGGCCCGGAGAATAGTAGGGAAGAATCTAGAGGTTGTCCAAGAGAAGTTGGAGAAGAAAAACACCACAAGGAGATCAACTCATTTTAGCTACAAAGAGGTTGGTACTCCTTTCTTTCTGTTCTGTATTTTCTAGAACATGCATGCTTTAGGAGTAAAATTGATAGAGTTAAGTGCTTTCGATCTTCAATTGCTTCCGCATGTGTTATATGAACACCTTCAATTGGTATCAGAGCATGATTAGAGCACTTAACTTGTATTAATTTTTCTGTGGTGGGTACCATTCTGAAAATGAATTTTCTGTGTGCTAAAATGGATGTGTAATGGTTTGGCAATTTTTTGAGCTTTCAATTCTTCATGAAAATGTAATTGCTCGGAAATGTAAGAGCGTTAATGTGTGTACAAGGGTCTGTAATTTTTATAGAGCCAATAGAGTCCATATAGGCTGTAAAATCGAAGAAATCTGGAGAAGACGCAAGCAGAAAAACAGCAGCAGAGGTTGCTGGTCGCGAGAGCGTCGGGACGCTCTACAAGTAGCGTCCCGACGCTGCAGAACAGATTTTCCAGAATCTGGAAATTTCCAGTCCGATTCGGTTCAGCAGCCTGAGTTGGGATCCGGTTCGGTTTGCCTGCAGCTGGTTCAGCCCATTTACACACATTACAAGGTCGGTTCAGTCCATCGAAGGGCGGTTCGGGACGGTTCGTGA

mRNA sequence

ATGTTGAATAAATTCTTCTCCAAAACTTTCCACAAAAAGGAAAAAGGAAACTTTGTGACTTCCTACTGCATCGACGTAGAAGAAGTTGACAATTCTGAGAAGGGTGAACAAAGGACCTCCATCTTCGATCGCATCAAGCCTCCAACTACTTGTCCTTCAGTATTCCAAAGAATGAGTATGGTCGCGACAGAAGAAGAAAATCAATGTTCGGTGTCCACCTCCGTTCGACCTTCAACTTTCCAAAGGCTAAGTGTCTCCGCATCGAAGAAAAGTCGACCTTCAACATCTGTTTTTGATCGCCTCAAAGTAACAAACGATCAACCAAAAAGAAAGATGGACAACTTGGAGTTGAAACTTTTCGATGAAGTAAACAGCGGCGAGAAGCTTCATAGTAGCATCCTGTCACGTATGAAGATGAAGTTTTCTGTTCTCATAAATACGGAAGAAGACTTCATTCCTCCAAATTTGATGTCTCGCTCGCCTCAAGTTCGGTGTTCCGCTCACCCTAAGTTCGTTGTTCCCTCTTCCTCAAGTTTGAAAGTTCTTACACTATACGTTGTTGCGTTGTTCTTTCTCCAAGTTCGAGGTTTCTTACGTGGCACGTTACGGCGTTGTTCCTTCTCCGAGTTTGAAGGTTCTCACGTTGCGCTGCTTTGCTATTCCTTCTCCAAGTTCGAAGCTTCTCACGCTGCGCTGCTTCCTTCTCCAAGTTCGAAGGTTCTCCGCTGCACGCTTCTGCGTTGCTCCTTCTCCAAGTTCGAAGGTTTGCACGTGTTGTTATGCTGCTTCGCTGTTGTTCCCTCTCCAAGTTCGAAGGTTCCCACGCTGCGCTGTTGTGTTACTTCCGTCTCCAACTTCAAGGTTGTCAAGTGCTACGCTATTTCGCAGTTCCTTCTCTCCAAGTTCGAAGGTTCTCACGCGTTTCGCTGCGGTTCCTTCTCTCCAAGTTCGAGGGTTCTTACGTTATACGCTACTGCATTGTTCTTTCTCCAAGCTCGAAGGTTCTCCACTGCACGCTCCTGCGTTGCTCCTTCTCCAAGTTTGAAGGTTCTCGAGTGCTACGCTGTTGCGTTGCTTCCTTCTCCAAGTTCGAAGGTTCCCACGCTGCACTGTTGTGCTGCTTCCTTCTCCAACTTCAAGGTTGTCAAGTGCTACGCTGGTTCGCAGTTTCTTCTCTCCAAGTTCGAAGGTTCTCACGCGCTTCGTTGTAGTTCCTTCTCTCCAAGTTCAAAGACTCTCACATTGCTTCACTTCAATTCCTTCTCCAAGTTCGAAGGTTCTCACGCGCTTTGTTGTAGTTCCTTCTCTCCAAGTTTGAAGTTCCTTCTCTCCAAGTTTGAAGGTTCTCACACGCTTCGCTACAGTTCCTTATCCAAGTTCGAAGGTGTTGGAGCCAATAGAGTCCATATAGGCTGTAAAATCGAAGAAATCTGGAGAAGACGCAAGCAGAAAAACAGCAGCAGAGGTTGCTGGTCGCGAGAGCGTCGGGACGCTCTACAAGTAGCGTCCCGACGCTGCAGAACAGATTTTCCAGAATCTGGAAATTTCCAGTCCGATTCGGTTCAGCAGCCTGAGTTGGGATCCGGTTCGGTTTGCCTGCAGCTGGTTCAGCCCATTTACACACATTACAAGGTCGGTTCAGTCCATCGAAGGGCGGTTCGGGACGGTTCGTGA

Coding sequence (CDS)

ATGTTGAATAAATTCTTCTCCAAAACTTTCCACAAAAAGGAAAAAGGAAACTTTGTGACTTCCTACTGCATCGACGTAGAAGAAGTTGACAATTCTGAGAAGGGTGAACAAAGGACCTCCATCTTCGATCGCATCAAGCCTCCAACTACTTGTCCTTCAGTATTCCAAAGAATGAGTATGGTCGCGACAGAAGAAGAAAATCAATGTTCGGTGTCCACCTCCGTTCGACCTTCAACTTTCCAAAGGCTAAGTGTCTCCGCATCGAAGAAAAGTCGACCTTCAACATCTGTTTTTGATCGCCTCAAAGTAACAAACGATCAACCAAAAAGAAAGATGGACAACTTGGAGTTGAAACTTTTCGATGAAGTAAACAGCGGCGAGAAGCTTCATAGTAGCATCCTGTCACGTATGAAGATGAAGTTTTCTGTTCTCATAAATACGGAAGAAGACTTCATTCCTCCAAATTTGATGTCTCGCTCGCCTCAAGTTCGGTGTTCCGCTCACCCTAAGTTCGTTGTTCCCTCTTCCTCAAGTTTGAAAGTTCTTACACTATACGTTGTTGCGTTGTTCTTTCTCCAAGTTCGAGGTTTCTTACGTGGCACGTTACGGCGTTGTTCCTTCTCCGAGTTTGAAGGTTCTCACGTTGCGCTGCTTTGCTATTCCTTCTCCAAGTTCGAAGCTTCTCACGCTGCGCTGCTTCCTTCTCCAAGTTCGAAGGTTCTCCGCTGCACGCTTCTGCGTTGCTCCTTCTCCAAGTTCGAAGGTTTGCACGTGTTGTTATGCTGCTTCGCTGTTGTTCCCTCTCCAAGTTCGAAGGTTCCCACGCTGCGCTGTTGTGTTACTTCCGTCTCCAACTTCAAGGTTGTCAAGTGCTACGCTATTTCGCAGTTCCTTCTCTCCAAGTTCGAAGGTTCTCACGCGTTTCGCTGCGGTTCCTTCTCTCCAAGTTCGAGGGTTCTTACGTTATACGCTACTGCATTGTTCTTTCTCCAAGCTCGAAGGTTCTCCACTGCACGCTCCTGCGTTGCTCCTTCTCCAAGTTTGAAGGTTCTCGAGTGCTACGCTGTTGCGTTGCTTCCTTCTCCAAGTTCGAAGGTTCCCACGCTGCACTGTTGTGCTGCTTCCTTCTCCAACTTCAAGGTTGTCAAGTGCTACGCTGGTTCGCAGTTTCTTCTCTCCAAGTTCGAAGGTTCTCACGCGCTTCGTTGTAGTTCCTTCTCTCCAAGTTCAAAGACTCTCACATTGCTTCACTTCAATTCCTTCTCCAAGTTCGAAGGTTCTCACGCGCTTTGTTGTAGTTCCTTCTCTCCAAGTTTGAAGTTCCTTCTCTCCAAGTTTGAAGGTTCTCACACGCTTCGCTACAGTTCCTTATCCAAGTTCGAAGGTGTTGGAGCCAATAGAGTCCATATAGGCTGTAAAATCGAAGAAATCTGGAGAAGACGCAAGCAGAAAAACAGCAGCAGAGGTTGCTGGTCGCGAGAGCGTCGGGACGCTCTACAAGTAGCGTCCCGACGCTGCAGAACAGATTTTCCAGAATCTGGAAATTTCCAGTCCGATTCGGTTCAGCAGCCTGAGTTGGGATCCGGTTCGGTTTGCCTGCAGCTGGTTCAGCCCATTTACACACATTACAAGGTCGGTTCAGTCCATCGAAGGGCGGTTCGGGACGGTTCGTGA

Protein sequence

MLNKFFSKTFHKKEKGNFVTSYCIDVEEVDNSEKGEQRTSIFDRIKPPTTCPSVFQRMSMVATEEENQCSVSTSVRPSTFQRLSVSASKKSRPSTSVFDRLKVTNDQPKRKMDNLELKLFDEVNSGEKLHSSILSRMKMKFSVLINTEEDFIPPNLMSRSPQVRCSAHPKFVVPSSSSLKVLTLYVVALFFLQVRGFLRGTLRRCSFSEFEGSHVALLCYSFSKFEASHAALLPSPSSKVLRCTLLRCSFSKFEGLHVLLCCFAVVPSPSSKVPTLRCCVTSVSNFKVVKCYAISQFLLSKFEGSHAFRCGSFSPSSRVLTLYATALFFLQARRFSTARSCVAPSPSLKVLECYAVALLPSPSSKVPTLHCCAASFSNFKVVKCYAGSQFLLSKFEGSHALRCSSFSPSSKTLTLLHFNSFSKFEGSHALCCSSFSPSLKFLLSKFEGSHTLRYSSLSKFEGVGANRVHIGCKIEEIWRRRKQKNSSRGCWSRERRDALQVASRRCRTDFPESGNFQSDSVQQPELGSGSVCLQLVQPIYTHYKVGSVHRRAVRDGS
Homology
[Close]
BLAST of Spg035174 vs. NCBI nr
Match: KAA0044978.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 143.7 bits (361), Expect = 4.9e-30
Identity = 78/122 (63.93%), Postives = 92/122 (75.41%), Query Frame = 0 

Query: 27  EEVDNSEKGEQRTSIFDRIKPPTTCPSVFQRMSMVATEEENQCSVSTSVRPSTFQRLSVS 86
           EEVDNS + +QRTS+FDRIKP TT  SVFQR+SM   EEENQC  ST  R S F+RLS+S
Sbjct: 120 EEVDNSNEIKQRTSVFDRIKPLTTRSSVFQRLSMATKEEENQCPTSTYARTSAFKRLSIS 179

Query: 87  ASKKSRPSTSVFDRLKVTNDQPKRKMDNLELKLFDEVNSGEKLHSSILSRMKMKFSVLIN 146
            SKK RPSTS FDRLK+TNDQ +R+M +L+ K F E N  +K+HS + SRMK K SV IN
Sbjct: 180 TSKKHRPSTSAFDRLKMTNDQQQREMKSLKAKPFHEENDDDKIHSRVPSRMKRKLSVDIN 239

Query: 147 TE 149
           TE
Sbjct: 240 TE 241

[Close]
BLAST of Spg035174 vs. NCBI nr
Match: KAA0063719.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 142.5 bits (358), Expect = 1.1e-29
Identity = 78/122 (63.93%), Postives = 92/122 (75.41%), Query Frame = 0 

Query: 27  EEVDNSEKGEQRTSIFDRIKPPTTCPSVFQRMSMVATEEENQCSVSTSVRPSTFQRLSVS 86
           +EVDNS + +QRTS+FDRIKP TT  SVFQR+SM   EEENQC  ST  R STF+RLS+S
Sbjct: 185 KEVDNSNEIKQRTSVFDRIKPLTTRSSVFQRLSMATKEEENQCPTSTYARTSTFKRLSIS 244

Query: 87  ASKKSRPSTSVFDRLKVTNDQPKRKMDNLELKLFDEVNSGEKLHSSILSRMKMKFSVLIN 146
            SKK RPSTS FDRLK+TNDQ +R+M  L+ K F E N  +K+HS + SRMK K SV IN
Sbjct: 245 TSKKHRPSTSAFDRLKMTNDQQQREMKFLKAKPFHEENDDDKIHSRVPSRMKRKLSVDIN 304

Query: 147 TE 149
           TE
Sbjct: 305 TE 306

[Close]
BLAST of Spg035174 vs. NCBI nr
Match: KAA0050734.1 (gag protease polyprotein [Cucumis melo var. makuwa] >TYJ95698.1 gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 141.7 bits (356), Expect = 1.9e-29
Identity = 78/122 (63.93%), Postives = 91/122 (74.59%), Query Frame = 0 

Query: 27  EEVDNSEKGEQRTSIFDRIKPPTTCPSVFQRMSMVATEEENQCSVSTSVRPSTFQRLSVS 86
           EEVDNS + +QRTSIFDRIKP TT   VFQR+SM   EEENQC  ST  R S F+RLS+S
Sbjct: 61  EEVDNSNEIKQRTSIFDRIKPLTTRSLVFQRLSMATKEEENQCPTSTYARTSAFKRLSIS 120

Query: 87  ASKKSRPSTSVFDRLKVTNDQPKRKMDNLELKLFDEVNSGEKLHSSILSRMKMKFSVLIN 146
            SKK RPSTS FDRLK+TNDQ +R+M +L+ K F E N  +K+HS + SRMK K SV IN
Sbjct: 121 TSKKHRPSTSAFDRLKMTNDQQQREMKSLKAKPFHEENGDDKIHSRVPSRMKRKLSVDIN 180

Query: 147 TE 149
           TE
Sbjct: 181 TE 182

[Close]
BLAST of Spg035174 vs. NCBI nr
Match: TYK08944.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 141.0 bits (354), Expect = 3.2e-29
Identity = 76/122 (62.30%), Postives = 92/122 (75.41%), Query Frame = 0 

Query: 27  EEVDNSEKGEQRTSIFDRIKPPTTCPSVFQRMSMVATEEENQCSVSTSVRPSTFQRLSVS 86
           EEVDNS + +QRTS+FDRIKP TT  SVFQR+SM   EE+NQC  ST  R S F+RLS+S
Sbjct: 537 EEVDNSNEIKQRTSVFDRIKPLTTRSSVFQRLSMATKEEKNQCPTSTYARTSAFKRLSIS 596

Query: 87  ASKKSRPSTSVFDRLKVTNDQPKRKMDNLELKLFDEVNSGEKLHSSILSRMKMKFSVLIN 146
            SKK RPSTS FDRLK+TNDQ +R+M +L+ K F E N  +K+H+ + SRMK K SV IN
Sbjct: 597 TSKKHRPSTSTFDRLKMTNDQQQREMKSLKAKPFHEENDDDKIHNRVPSRMKRKLSVDIN 656

Query: 147 TE 149
           TE
Sbjct: 657 TE 658

[Close]
BLAST of Spg035174 vs. NCBI nr
Match: KAA0055462.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 141.0 bits (354), Expect = 3.2e-29
Identity = 76/122 (62.30%), Postives = 92/122 (75.41%), Query Frame = 0 

Query: 27  EEVDNSEKGEQRTSIFDRIKPPTTCPSVFQRMSMVATEEENQCSVSTSVRPSTFQRLSVS 86
           EEVDNS + +QRTS+FDRIKP TT  SVFQR+SM   EE+NQC  ST  R S F+RLS+S
Sbjct: 537 EEVDNSNEIKQRTSVFDRIKPLTTRSSVFQRLSMATKEEKNQCPTSTYARTSAFKRLSIS 596

Query: 87  ASKKSRPSTSVFDRLKVTNDQPKRKMDNLELKLFDEVNSGEKLHSSILSRMKMKFSVLIN 146
            SKK RPSTS FDRLK+TNDQ +R+M +L+ K F E N  +K+H+ + SRMK K SV IN
Sbjct: 597 TSKKHRPSTSTFDRLKMTNDQQQREMKSLKAKPFHEENDDDKIHNRVPSRMKRKLSVDIN 656

Query: 147 TE 149
           TE
Sbjct: 657 TE 658

[Close]
BLAST of Spg035174 vs. ExPASy TrEMBL
Match: A0A5A7TQ06 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002860 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.4e-30
Identity = 78/122 (63.93%), Postives = 92/122 (75.41%), Query Frame = 0 

Query: 27  EEVDNSEKGEQRTSIFDRIKPPTTCPSVFQRMSMVATEEENQCSVSTSVRPSTFQRLSVS 86
           EEVDNS + +QRTS+FDRIKP TT  SVFQR+SM   EEENQC  ST  R S F+RLS+S
Sbjct: 120 EEVDNSNEIKQRTSVFDRIKPLTTRSSVFQRLSMATKEEENQCPTSTYARTSAFKRLSIS 179

Query: 87  ASKKSRPSTSVFDRLKVTNDQPKRKMDNLELKLFDEVNSGEKLHSSILSRMKMKFSVLIN 146
            SKK RPSTS FDRLK+TNDQ +R+M +L+ K F E N  +K+HS + SRMK K SV IN
Sbjct: 180 TSKKHRPSTSAFDRLKMTNDQQQREMKSLKAKPFHEENDDDKIHSRVPSRMKRKLSVDIN 239

Query: 147 TE 149
           TE
Sbjct: 240 TE 241

[Close]
BLAST of Spg035174 vs. ExPASy TrEMBL
Match: A0A5A7VDY3 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold329G002440 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 5.3e-30
Identity = 78/122 (63.93%), Postives = 92/122 (75.41%), Query Frame = 0 

Query: 27  EEVDNSEKGEQRTSIFDRIKPPTTCPSVFQRMSMVATEEENQCSVSTSVRPSTFQRLSVS 86
           +EVDNS + +QRTS+FDRIKP TT  SVFQR+SM   EEENQC  ST  R STF+RLS+S
Sbjct: 185 KEVDNSNEIKQRTSVFDRIKPLTTRSSVFQRLSMATKEEENQCPTSTYARTSTFKRLSIS 244

Query: 87  ASKKSRPSTSVFDRLKVTNDQPKRKMDNLELKLFDEVNSGEKLHSSILSRMKMKFSVLIN 146
            SKK RPSTS FDRLK+TNDQ +R+M  L+ K F E N  +K+HS + SRMK K SV IN
Sbjct: 245 TSKKHRPSTSAFDRLKMTNDQQQREMKFLKAKPFHEENDDDKIHSRVPSRMKRKLSVDIN 304

Query: 147 TE 149
           TE
Sbjct: 305 TE 306

[Close]
BLAST of Spg035174 vs. ExPASy TrEMBL
Match: A0A5D3BBF9 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold726G00250 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 9.0e-30
Identity = 78/122 (63.93%), Postives = 91/122 (74.59%), Query Frame = 0 

Query: 27  EEVDNSEKGEQRTSIFDRIKPPTTCPSVFQRMSMVATEEENQCSVSTSVRPSTFQRLSVS 86
           EEVDNS + +QRTSIFDRIKP TT   VFQR+SM   EEENQC  ST  R S F+RLS+S
Sbjct: 61  EEVDNSNEIKQRTSIFDRIKPLTTRSLVFQRLSMATKEEENQCPTSTYARTSAFKRLSIS 120

Query: 87  ASKKSRPSTSVFDRLKVTNDQPKRKMDNLELKLFDEVNSGEKLHSSILSRMKMKFSVLIN 146
            SKK RPSTS FDRLK+TNDQ +R+M +L+ K F E N  +K+HS + SRMK K SV IN
Sbjct: 121 TSKKHRPSTSAFDRLKMTNDQQQREMKSLKAKPFHEENGDDKIHSRVPSRMKRKLSVDIN 180

Query: 147 TE 149
           TE
Sbjct: 181 TE 182

[Close]
BLAST of Spg035174 vs. ExPASy TrEMBL
Match: A0A5A7UI09 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold221G00340 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.5e-29
Identity = 76/122 (62.30%), Postives = 92/122 (75.41%), Query Frame = 0 

Query: 27  EEVDNSEKGEQRTSIFDRIKPPTTCPSVFQRMSMVATEEENQCSVSTSVRPSTFQRLSVS 86
           EEVDNS + +QRTS+FDRIKP TT  SVFQR+SM   EE+NQC  ST  R S F+RLS+S
Sbjct: 537 EEVDNSNEIKQRTSVFDRIKPLTTRSSVFQRLSMATKEEKNQCPTSTYARTSAFKRLSIS 596

Query: 87  ASKKSRPSTSVFDRLKVTNDQPKRKMDNLELKLFDEVNSGEKLHSSILSRMKMKFSVLIN 146
            SKK RPSTS FDRLK+TNDQ +R+M +L+ K F E N  +K+H+ + SRMK K SV IN
Sbjct: 597 TSKKHRPSTSTFDRLKMTNDQQQREMKSLKAKPFHEENDDDKIHNRVPSRMKRKLSVDIN 656

Query: 147 TE 149
           TE
Sbjct: 657 TE 658

[Close]
BLAST of Spg035174 vs. ExPASy TrEMBL
Match: A0A5D3CCI8 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold314G00350 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.5e-29
Identity = 76/122 (62.30%), Postives = 92/122 (75.41%), Query Frame = 0 

Query: 27  EEVDNSEKGEQRTSIFDRIKPPTTCPSVFQRMSMVATEEENQCSVSTSVRPSTFQRLSVS 86
           EEVDNS + +QRTS+FDRIKP TT  SVFQR+SM   EE+NQC  ST  R S F+RLS+S
Sbjct: 537 EEVDNSNEIKQRTSVFDRIKPLTTRSSVFQRLSMATKEEKNQCPTSTYARTSAFKRLSIS 596

Query: 87  ASKKSRPSTSVFDRLKVTNDQPKRKMDNLELKLFDEVNSGEKLHSSILSRMKMKFSVLIN 146
            SKK RPSTS FDRLK+TNDQ +R+M +L+ K F E N  +K+H+ + SRMK K SV IN
Sbjct: 597 TSKKHRPSTSTFDRLKMTNDQQQREMKSLKAKPFHEENDDDKIHNRVPSRMKRKLSVDIN 656

Query: 147 TE 149
           TE
Sbjct: 657 TE 658

The following BLAST results are available for this feature:
BLAST of Spg035174 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0044978.14.9e-3063.93retrotransposon gag protein [Cucumis melo var. makuwa][more]
KAA0063719.11.1e-2963.93ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0050734.11.9e-2963.93gag protease polyprotein [Cucumis melo var. makuwa] >TYJ95698.1 gag protease pol... [more]
TYK08944.13.2e-2962.30retrotransposon gag protein [Cucumis melo var. makuwa][more]
KAA0055462.13.2e-2962.30retrotransposon gag protein [Cucumis melo var. makuwa][more]
BLAST of Spg035174 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg035174 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TQ062.4e-3063.93Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
A0A5A7VDY35.3e-3063.93Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3BBF99.0e-3063.93Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A5A7UI091.5e-2962.30Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
A0A5D3CCI81.5e-2962.30Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
BLAST of Spg035174 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg035174.1Spg035174.1mRNA