Spg034960 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg034960
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	RT_RNaseH_2 domain-containing protein
Location	scaffold3: 27634009 .. 27637151 (+)
RNA-Seq Expression	Spg034960
Synteny	Spg034960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAAACGAGAGCGAGAAAAGAAAGGGAGAATGAGGAGGAAGAAGTACCTGTTACCCCTGAGGTGCAGAAGGTAAAGGCGAAAAAGAAAAGGACCCCGGAGGAGAAAGAAGCCAAAAGACGAAGACGACAACAGAGGGCTGAGGAACAAGAAAAGGCAACAGAGGTTGTGACTGTTACTGCCACAGTAGGAGAAGAAAGCCCGAAACAACCAGAGGAAAATACCGAGCAGAGGGTCGCGGATACAGAAGAAGAACGAACAGAAGAGGTGCAAGAAGATCGGACCGAGGAAGTTCGAGAAGAACTTACAGAGGAAATTCAAGAAAAGCAGGCCGAGGATGTACAAATGCAACAGGTAGAAGATGTTCAGGTAACGGATAATGAGCCAGTGCAGGAGGCTCAAGTGGAGGTGATCATGCCGGAGGTACCAAAGCGTCGCCGCATTAAGAGGAAAGTAGGCCGCGTTAGGGTTGTCCGAACTGATACTCCTTCGCCTCCAACCACGGATTCTGAAAGAGAGAATGCAGAGAGAGAAGAGCGTGAGAAGAAGGAAGCCGAAGAAAGAGCAAGAGAAGAGGCAGAGAAAAAGGCTGAGGAAGAGCGGTTGCTCAAGCGAAGGGCGGAAAAGGGCAAAATTGTTGCTGAAGCATCGGAGGAACCTGATGAAATAGAAGAACATGGTCGCTTCATCAACAATTTTGCCAGAGCAAAATACGCTGAGCTGCTGAAAAGAGACTTCCTGTTTGAAAGAGGATTTAGCTGTAATCTTCCACATTTTCTGAGGACCGGCATTGCAGACCACGGCTGGGAGCGGTTTTGTTCAAAGCCTGAGGCTGTAAACGCACAGGTGGTGCGTGAATTTTATGCTAATATTGATAAAGAAGATGGTTTCCAGGTGATTGTTCGAGGAGTCGAGGTAGACTGGAGTCCTAGTGCTATCAATGCACTGTATAACCTTCAGAATTTCCCCCATGCAGCTTATAATGAGATGGCTGTAGCGCCATCTAATGAGTAGTTAAGTGATGCTGTGCGGGAGGTGGGTATTGAAGGGGCACAGTGGCAGCTGTCCAAGACAGGGAAAAGGACATTTCAGTCAGCTTATCTGAAGAGGGAAGCGAACACATGGATGGGATTTATCAGACAGAGGATGCTTCCAACGACTCATGACTCGACGGTCTCGAGGGAACGGGTTCTTCTGGCTTTCGCGATTTTGCGGTCTCTTAGCATTGATGTAGGGAAGATGATTGTTAATGAGATTTCTGGTTGTTGGAAAAAGAAAGTGGGGAAACTGTTCTTTCCGAACACAATCACGATGCTTTGCAGAAGAGCAGGGGTTCCAGTGGATGAGGGAGATGTTATCTTGTTTGACAAGGGAATTATAGATACGCCTAACTTGGCGCGGCTTCAGCGTACGCAGGAGGCACGTCAAGGTGGGCTTATCTACGGCATCAACATGGTTTTAGAACAACTGGCACTTTCGGCCAGCAGGCAAGAGTTTGCCGAGAGGCAAGCTTTAACCTTCTGGAACTATGTTAGAAATCGTGATGCCAATCTGAAGAAGGCGCTGCAAGAGAATTTTTCCAAGCCATATCCAGCCCTTCCAGCATTCCCTGAGGATCTGTTGAACCCTTGGATTCCACCCCCACCTGTTGAAAGAGAAGAGGAGGATGATGAAGAGCAGGGTCAGGAAGACTGACTAATGTGATGATTTTGAGCGAGCATTACTTTTGTTTTTCCATTTTTGTTTGCTCGCGCATATCTGACCCCGCTGGCTAATATGTTTGCTTGTTTCTTTTTAATGTTTCTGCTTCTACAAAAATATATCTGCTTTTGTAATTCCTTTCTCTTTGTTTTAATGAAATTTCCTAGATGTTTCTGTTCTATGAGCACTAAGTAACTCTGACTTAACTAATTTCTTTTGAATTTTTGAAGCTTGGACTGGCTAAGCTTAATTAGATCAAGGTATTCTGATCTCCAGAAACCTTTTGCTTGAGCATTTTCTCTGACCTGGTCGTTGCTGCGGCAAAGAAAATTCTGGAGGTAGTGTTGACTTATGTGATCCGCTTTAAGCTTAGGTCTAATCCCGCGCTTAGTTTTGAAATTCAGATAGAAAAATTTAAGTTTGGGGGTGTCATTTAAAATTTTAATGATTCATTGGGGACAATGAATAATTCAAGTTTGGGGGACTTTTTGCTACTCCAATTGTTTTGCTCGAGCATTCCTCTCCTTCATTAAATAATTTGTTAGGTTATTGAGTAACCGGGGACATTTGTGATACCCACAGTTTGTCTTCGCGTCAAAAGGTGACCTAGGAAATGTGAAAAATTATGAAAAATTATTTGCTAAAAAAATGATTGTTGAAAATTTTGTTGAAAAATTCATGGAGCAAAAGTTTTGAAGGATGAATGATGATCCAGCAGTTTTTCTGTCTCCCAGAACTTAGGTGAGTTTCATCATAAAATGTCGCCATTCTGAGGGGCAAGAGATGGAATAACTAAGGATTTTTTAGCTTTACAAAGAGTATTTAGCCTAATTGGTGATGAGTTCGAGGCAAGGGTATACTGCACCATAAAGTGGGTCATCCCGTGCTTAAGAGCTTATGACTGTAGGGCTGCTTTAAGTCTGAAAAACAAAAGTATAAACCCCTTGAAAATGTGTTTTGATATGTCTGATAATAGAGCTAAGCTGTGGCAAGTTCTTAGAATTGAGTTAAAAGTGGTGATTATTTGTCCATGCCGGAAGAATTATTTTGCTGCAGCAGAGCTTGGTTTTGCAGAGTGCTCAGGTAAAGGTTGAAGGTAGTGTTGGATTTTCTGGTTTGATTAAGCTGTGCTTTGTCTAATGTTTTGAATTCTTGAAGGGAAAGTTGGTTAGTATTGCTCGGGACGCGCAATAGTTCAAGTTTGGGGGTGTGATAACTGCCCAAAAGGTAGTTATTTAGGCCTCATTTCTATATTGATTTGTGTGTCTTTTGTGCCTAGTAGGGTTGGTTTTAGATATATATTACATGTTTTAACCCATTTGGAAGAATGGAAGCTTTGGAAATCATTTTGTGCAGAATCTGTTGCTGGGCGACTTGAGGGAGCAAATTCTGTGCTGCAGCAAAACTGGGGGCAGAACTGCCACGTCACAGCTCGTTAG

mRNA sequence

ATGGCGAAAACGAGAGCGAGAAAAGAAAGGGAGAATGAGGAGGAAGAAGTACCTGTTACCCCTGAGGTGCAGAAGGTAAAGGCGAAAAAGAAAAGGACCCCGGAGGAGAAAGAAGCCAAAAGACGAAGACGACAACAGAGGGCTGAGGAACAAGAAAAGGCAACAGAGGTTGTGACTGTTACTGCCACAGTAGGAGAAGAAAGCCCGAAACAACCAGAGGAAAATACCGAGCAGAGGGTCGCGGATACAGAAGAAGAACGAACAGAAGAGGTGCAAGAAGATCGGACCGAGGAAGTTCGAGAAGAACTTACAGAGGAAATTCAAGAAAAGCAGGCCGAGGATGTACAAATGCAACAGGTAGAAGATGTTCAGGTAACGGATAATGAGCCAGTGCAGGAGGCTCAAGTGGAGGTGATCATGCCGGAGGTACCAAAGCGTCGCCGCATTAAGAGGAAAGTAGGCCGCGTTAGGGTTGTCCGAACTGATACTCCTTCGCCTCCAACCACGGATTCTGAAAGAGAGAATGCAGAGAGAGAAGAGCGTGAGAAGAAGGAAGCCGAAGAAAGAGCAAGAGAAGAGGCAGAGAAAAAGGCTGAGGAAGAGCGGTTGCTCAAGCGAAGGGCGGAAAAGGGCAAAATTGTTGCTGAAGCATCGGAGGAACCTGATGAAATAGAAGAACATGGTCGCTTCATCAACAATTTTGCCAGAGCAAAATACGCTGAGCTGCTGAAAAGAGACTTCCTGTTTGAAAGAGGATTTAGCTGTAATCTTCCACATTTTCTGAGGACCGGCATTGCAGACCACGGCTGGGAGCGGTTTTGTTCAAAGCCTGAGGCTGTAAACGCACAGGTGGTGCGTGAATTTTATGCTAATATTGATAAAGAAGATGGTTTCCAGGTGATTGTTCGAGGAGTCGAGTTAAGTGATGCTGTGCGGGAGGTGGGTATTGAAGGGGCACAGTGGCAGCTGTCCAAGACAGGGAAAAGGACATTTCAGTCAGCTTATCTGAAGAGGGAAGCGAACACATGGATGGGATTTATCAGACAGAGGATGCTTCCAACGACTCATGACTCGACGGTCTCGAGGGAACGGGTTCTTCTGGCTTTCGCGATTTTGCGGTCTCTTAGCATTGATGTAGGGAAGATGATTGTTAATGAGATTTCTGGTTGTTGGAAAAAGAAAGTGGGGAAACTGTTCTTTCCGAACACAATCACGATGCTTTGCAGAAGAGCAGGGGTTCCAGTGGATGAGGGAGATGTTATCTTGTTTGACAAGGGAATTATAGATACGCCTAACTTGGCGCGGCTTCAGCGTACGCAGGAGGCACGTCAAGGTGGGCTTATCTACGGCATCAACATGGTTTTAGAACAACTGGCACTTTCGGCCAGCAGGCAAGAGTTTGCCGAGAGGCAAGCTTTAACCTTCTGGAACTATGTTAGAAATCGTGATGCCAATCTGAAGAAGGCGCTGCAAGAGAATTTTTCCAAGCCATATCCAGCCCTTCCAGCATTCCCTGAGGATCTGTTGAACCCTTGGATTCCACCCCCACCTGTTGAAAGAGAAGAGGAGGATGATGAAGAGCAGGAAACCTTTTGCTTGAGCATTTTCTCTGACCTGGTCGTTGCTGCGGCAAAGAAAATTCTGGAGGTAGTGTTGACTTATGTGATCCGCTTTAAGCTTAGGGCTGCTTTAAGTCTGAAAAACAAAAGTATAAACCCCTTGAAAATGTGTTTTGATATGTCTGATAATAGAGCTAAGCTGTGGCAAGTTCTTAGAATTGAGTTAAAAGTGGTGATTATTTGTCCATGCCGGAAGAATTATTTTGCTGCAGCAGAGCTTGGTTTTGCAGAGTGCTCAGAATCTGTTGCTGGGCGACTTGAGGGAGCAAATTCTGTGCTGCAGCAAAACTGGGGGCAGAACTGCCACGTCACAGCTCGTTAG

Coding sequence (CDS)

ATGGCGAAAACGAGAGCGAGAAAAGAAAGGGAGAATGAGGAGGAAGAAGTACCTGTTACCCCTGAGGTGCAGAAGGTAAAGGCGAAAAAGAAAAGGACCCCGGAGGAGAAAGAAGCCAAAAGACGAAGACGACAACAGAGGGCTGAGGAACAAGAAAAGGCAACAGAGGTTGTGACTGTTACTGCCACAGTAGGAGAAGAAAGCCCGAAACAACCAGAGGAAAATACCGAGCAGAGGGTCGCGGATACAGAAGAAGAACGAACAGAAGAGGTGCAAGAAGATCGGACCGAGGAAGTTCGAGAAGAACTTACAGAGGAAATTCAAGAAAAGCAGGCCGAGGATGTACAAATGCAACAGGTAGAAGATGTTCAGGTAACGGATAATGAGCCAGTGCAGGAGGCTCAAGTGGAGGTGATCATGCCGGAGGTACCAAAGCGTCGCCGCATTAAGAGGAAAGTAGGCCGCGTTAGGGTTGTCCGAACTGATACTCCTTCGCCTCCAACCACGGATTCTGAAAGAGAGAATGCAGAGAGAGAAGAGCGTGAGAAGAAGGAAGCCGAAGAAAGAGCAAGAGAAGAGGCAGAGAAAAAGGCTGAGGAAGAGCGGTTGCTCAAGCGAAGGGCGGAAAAGGGCAAAATTGTTGCTGAAGCATCGGAGGAACCTGATGAAATAGAAGAACATGGTCGCTTCATCAACAATTTTGCCAGAGCAAAATACGCTGAGCTGCTGAAAAGAGACTTCCTGTTTGAAAGAGGATTTAGCTGTAATCTTCCACATTTTCTGAGGACCGGCATTGCAGACCACGGCTGGGAGCGGTTTTGTTCAAAGCCTGAGGCTGTAAACGCACAGGTGGTGCGTGAATTTTATGCTAATATTGATAAAGAAGATGGTTTCCAGGTGATTGTTCGAGGAGTCGAGTTAAGTGATGCTGTGCGGGAGGTGGGTATTGAAGGGGCACAGTGGCAGCTGTCCAAGACAGGGAAAAGGACATTTCAGTCAGCTTATCTGAAGAGGGAAGCGAACACATGGATGGGATTTATCAGACAGAGGATGCTTCCAACGACTCATGACTCGACGGTCTCGAGGGAACGGGTTCTTCTGGCTTTCGCGATTTTGCGGTCTCTTAGCATTGATGTAGGGAAGATGATTGTTAATGAGATTTCTGGTTGTTGGAAAAAGAAAGTGGGGAAACTGTTCTTTCCGAACACAATCACGATGCTTTGCAGAAGAGCAGGGGTTCCAGTGGATGAGGGAGATGTTATCTTGTTTGACAAGGGAATTATAGATACGCCTAACTTGGCGCGGCTTCAGCGTACGCAGGAGGCACGTCAAGGTGGGCTTATCTACGGCATCAACATGGTTTTAGAACAACTGGCACTTTCGGCCAGCAGGCAAGAGTTTGCCGAGAGGCAAGCTTTAACCTTCTGGAACTATGTTAGAAATCGTGATGCCAATCTGAAGAAGGCGCTGCAAGAGAATTTTTCCAAGCCATATCCAGCCCTTCCAGCATTCCCTGAGGATCTGTTGAACCCTTGGATTCCACCCCCACCTGTTGAAAGAGAAGAGGAGGATGATGAAGAGCAGGAAACCTTTTGCTTGAGCATTTTCTCTGACCTGGTCGTTGCTGCGGCAAAGAAAATTCTGGAGGTAGTGTTGACTTATGTGATCCGCTTTAAGCTTAGGGCTGCTTTAAGTCTGAAAAACAAAAGTATAAACCCCTTGAAAATGTGTTTTGATATGTCTGATAATAGAGCTAAGCTGTGGCAAGTTCTTAGAATTGAGTTAAAAGTGGTGATTATTTGTCCATGCCGGAAGAATTATTTTGCTGCAGCAGAGCTTGGTTTTGCAGAGTGCTCAGAATCTGTTGCTGGGCGACTTGAGGGAGCAAATTCTGTGCTGCAGCAAAACTGGGGGCAGAACTGCCACGTCACAGCTCGTTAG

Protein sequence

MAKTRARKERENEEEEVPVTPEVQKVKAKKKRTPEEKEAKRRRRQQRAEEQEKATEVVTVTATVGEESPKQPEENTEQRVADTEEERTEEVQEDRTEEVREELTEEIQEKQAEDVQMQQVEDVQVTDNEPVQEAQVEVIMPEVPKRRRIKRKVGRVRVVRTDTPSPPTTDSERENAEREEREKKEAEERAREEAEKKAEEERLLKRRAEKGKIVAEASEEPDEIEEHGRFINNFARAKYAELLKRDFLFERGFSCNLPHFLRTGIADHGWERFCSKPEAVNAQVVREFYANIDKEDGFQVIVRGVELSDAVREVGIEGAQWQLSKTGKRTFQSAYLKREANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKMIVNEISGCWKKKVGKLFFPNTITMLCRRAGVPVDEGDVILFDKGIIDTPNLARLQRTQEARQGGLIYGINMVLEQLALSASRQEFAERQALTFWNYVRNRDANLKKALQENFSKPYPALPAFPEDLLNPWIPPPPVEREEEDDEEQETFCLSIFSDLVVAAAKKILEVVLTYVIRFKLRAALSLKNKSINPLKMCFDMSDNRAKLWQVLRIELKVVIICPCRKNYFAAAELGFAECSESVAGRLEGANSVLQQNWGQNCHVTAR

Homology

[Close]

BLAST of Spg034960 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 161.8 bits (408), Expect = 2.0e-35
Identity = 107/341 (31.38%), Postives = 162/341 (47.51%), Query Frame = 0


Query: 244 KRDFLFERGFSCNLPHFLRTGIADHGWERFCSKPEAVNAQVVREFYANIDKEDGFQVIVR 303
           ++ F+ +   +     F+   I  H W++FC+ PE     +VREFYAN+   +   V VR
Sbjct: 46  EKGFVLDNSETMGQLPFIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTDPEENTVYVR 105

Query: 304 GVELS-------------DAVRE-------------------VGIEGAQWQLSKTGKRTF 363
           GV++S             D V E                   V   GA+W +S  G  T 
Sbjct: 106 GVQVSWSEEAINAVFGLGDPVDEHSEFIQNITQQDLITVLETVAAAGAEWNVSAQGAYTC 165

Query: 364 QSAYLKREANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKMIVNEISGCW 423
             + L   A  W  F++ R+LPTTH  TVS++R+LL  ++L   SI+VG+MI +EI  C 
Sbjct: 166 IRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACA 225

Query: 424 KKKVGKLFFPNTITMLCRRAGVPVDEGDVILFDKGIIDTPNLARLQR---TQEARQ---- 483
            +K G LFFP+ IT LCR A  P    +  L + G ID   +AR+ +   T+  +Q    
Sbjct: 226 ARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGEIDAIAVARIAQEGPTESTQQPSSS 285

Query: 484 -----------GGLIYGINMVLEQLALSASRQ-------EFAERQALTFWNYVRNRDANL 528
                      G ++  +  + ++L+    +Q       +   +Q   FW Y + RD  L
Sbjct: 286 RPATASSNRTNGDILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTAL 345

[Close]

BLAST of Spg034960 vs. NCBI nr
Match: PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii])

HSP 1 Score: 142.9 bits (359), Expect = 9.7e-30
Identity = 102/293 (34.81%), Postives = 142/293 (48.46%), Query Frame = 0


Query: 284 VVREFYANIDKEDGFQVIVRGVELS-------------DAVRE----------------- 343
           +VREFYAN+   +   + VRGV++S             D V E                 
Sbjct: 16  LVREFYANLTDPEENTIYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIENITEPELITVL 75

Query: 344 --VGIEGAQWQLSKTGKRTFQSAYLKREANTWMGFIRQRMLPTTHDSTVSRERVLLAFAI 403
             V   GA+W +S  G  T   + L   A  W  F++ R+LPTTH   VS++R+LL  ++
Sbjct: 76  ETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKIVSKDRMLLLHSM 135

Query: 404 LRSLSIDVGKMIVNEISGCWKKKVGKLFFPNTITMLCRRAGVPVDEGDVILFDKGIIDTP 463
           L   SI+VG+MI +EI  C  +K G LFFP+ IT LCR A   V+E    L + G ID  
Sbjct: 136 LNGKSINVGRMIHSEIRACAAQKTGALFFPSLITRLCRNAPFLVNEEK--LHNTGEIDAI 195

Query: 464 NLARL------QRTQE-----------ARQGGLIYGINMVLEQLALSASRQEFAERQALT 523
            +AR+      + TQ+           +R  G +      LEQ     S+QE   +Q   
Sbjct: 196 AVARITQEGPTESTQQPSSSRPAAASSSRTNGDVLQQLKALEQ---RLSQQEHTHKQQQQ 255

Query: 524 FWNYVRNRDANLKKALQENFSKPYPALPAFPEDLLNPWIPPPPVEREEEDDEE 528
           FW Y + RD  LKKALQ NF++P P  PAFP+++L         E E E D++
Sbjct: 256 FWAYSKERDTALKKALQNNFTRPIPTFPAFPQEILQDL----DYEYEAESDKD 299

[Close]

BLAST of Spg034960 vs. NCBI nr
Match: TYG52543.1 (hypothetical protein ES288_D09G036700v1 [Gossypium darwinii])

HSP 1 Score: 127.1 bits (318), Expect = 5.5e-25
Identity = 79/234 (33.76%), Postives = 118/234 (50.43%), Query Frame = 0


Query: 226 EHGRFINNFARAKYAELLK-RDFLFERGFSCN------LPHFLRTGIADHGWERFCSKPE 285
           E+   I+   + ++  + K +  + E+GF         +P  +R  I    WERFC    
Sbjct: 14  ENSILIDEEVKERFDSIFKHQPMMSEKGFGLKSNDLMVVPIPIRKKINALKWERFCDVRS 73

Query: 286 AVNAQVVREFYANIDKEDGFQVIVRGVE------LSDAVREVGIEGAQWQLSKTGKRTFQ 345
             + ++VREFYA++  +D  +VIVR         L   +  V   G+QW +   G  + Q
Sbjct: 74  LPDDELVREFYASLTTQDATEVIVRKKSNINWDFLQQVLDVVTNLGSQWIIRNYGSHSCQ 133

Query: 346 SAYLKREANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKMIVNEISGCWK 405
             YLK  A  W  F+R   +P +H ST+S E +LL +AIL   SI+VGK+I+ EI  C K
Sbjct: 134 REYLKPVAKVWFYFVRYSFMPISHSSTISMEWMLLLYAILTEKSINVGKIILKEIQNCAK 193

Query: 406 KKVGKLFFPNTITMLCRRAGVPVDEGDVILFDKGIIDTPNLARL-QRTQEARQG 446
           KK    +FP+ IT LC +A V +       + +G I   +L RL +R  E  QG
Sbjct: 194 KKARSAYFPSLITSLCLKAHVKIQANLKGRYVQGCITNYDLERLVERVHELNQG 247

[Close]

BLAST of Spg034960 vs. NCBI nr
Match: PON70375.1 (hypothetical protein PanWU01x14_080440 [Parasponia andersonii])

HSP 1 Score: 124.4 bits (311), Expect = 3.6e-24
Identity = 69/204 (33.82%), Postives = 99/204 (48.53%), Query Frame = 0


Query: 243 LKRDFLFERGFSCNLPHFLRTGIADHGWERFCSKPEAVNAQVVREFYANIDKEDGFQVIV 302
           ++++F+++       P F+   I  H W+ FC+ PE     +VREFY N+   D   V +
Sbjct: 66  VEKEFVWDNSKPLEQPPFIADVIIQHNWQLFCAHPEDPIVPLVREFYTNMTNPDDDTVYI 125

Query: 303 RGVE-------------LSDAVRE-------------------VGIEGAQWQLSKTGKRT 362
           RGV+             L D + E                   V I GA+W +S  G  T
Sbjct: 126 RGVQVPLSVEAINTIFSLGDPIDEHSEFVEDITKPELVIVLETVAIVGAEWNVSSQGAYT 185

Query: 363 FQSAYLKREANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKMIVNEISGC 415
              + L   A  W  F++ R+LPTTH  TVS+E V L +++L   SI+VG+MI  EI  C
Sbjct: 186 CLRSSLNPPAKVWYHFLKSRLLPTTHGKTVSKEHVSLLYSMLTGKSINVGRMIHREICAC 245

[Close]

BLAST of Spg034960 vs. NCBI nr
Match: PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii])

HSP 1 Score: 123.6 bits (309), Expect = 6.1e-24
Identity = 87/273 (31.87%), Postives = 128/273 (46.89%), Query Frame = 0


Query: 201 ERLLKRRAEKGKIVAEASEEPDEIEEHGRFINNFARAKYAELLKRDFLFERGFSCNLPHF 260
           +R+ ++  +  K   EA+E   E     R +N           ++ F+ +   +     F
Sbjct: 4   KRVARKAHKAVKFETEAAETRYENNIQNRPLN----------AEKGFVLDNSETMGQLPF 63

Query: 261 LRTGIADHGWERFCSKPEAVNAQVVREFYANIDKEDGFQVIVRGVELS------------ 320
           +   I  H W++FC+ PE     +VREFYAN+       V VRGV++S            
Sbjct: 64  IAQVITQHNWKQFCAHPEDPIVPLVREFYANLTDPVENTVYVRGVQVSWSEEAINAVFGL 123

Query: 321 -DAVRE-------------------VGIEGAQWQLSKTGKRTFQSAYLKREANTWMGFIR 380
            D V E                   V + GA+W +S  G  T   + L   A  W  F++
Sbjct: 124 GDPVDEHSEFIENITEHDLITVLETVAVAGAEWNVSAQGAYTCIRSALTPAAKVWFHFLK 183

Query: 381 QRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKMIVNEISGCWKKKVGKLFFPNTITMLC 440
             +LPTTH  TVS++R+LL  ++L   SI+VG+MI +EI  C  +K G LFFP+ IT LC
Sbjct: 184 SHLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLC 243

Query: 441 RRAGVPVDEGDVILFDKGIIDTPNLARLQRTQE 442
           R A  P    +  L + G ID   +AR+  TQE
Sbjct: 244 RNARAPFLVNEEKLHNTGEIDAIAVARI--TQE 264

[Close]

BLAST of Spg034960 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 9.8e-36
Identity = 107/341 (31.38%), Postives = 162/341 (47.51%), Query Frame = 0


Query: 244 KRDFLFERGFSCNLPHFLRTGIADHGWERFCSKPEAVNAQVVREFYANIDKEDGFQVIVR 303
           ++ F+ +   +     F+   I  H W++FC+ PE     +VREFYAN+   +   V VR
Sbjct: 46  EKGFVLDNSETMGQLPFIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTDPEENTVYVR 105

Query: 304 GVELS-------------DAVRE-------------------VGIEGAQWQLSKTGKRTF 363
           GV++S             D V E                   V   GA+W +S  G  T 
Sbjct: 106 GVQVSWSEEAINAVFGLGDPVDEHSEFIQNITQQDLITVLETVAAAGAEWNVSAQGAYTC 165

Query: 364 QSAYLKREANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKMIVNEISGCW 423
             + L   A  W  F++ R+LPTTH  TVS++R+LL  ++L   SI+VG+MI +EI  C 
Sbjct: 166 IRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACA 225

Query: 424 KKKVGKLFFPNTITMLCRRAGVPVDEGDVILFDKGIIDTPNLARLQR---TQEARQ---- 483
            +K G LFFP+ IT LCR A  P    +  L + G ID   +AR+ +   T+  +Q    
Sbjct: 226 ARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGEIDAIAVARIAQEGPTESTQQPSSS 285

Query: 484 -----------GGLIYGINMVLEQLALSASRQ-------EFAERQALTFWNYVRNRDANL 528
                      G ++  +  + ++L+    +Q       +   +Q   FW Y + RD  L
Sbjct: 286 RPATASSNRTNGDILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTAL 345

[Close]

BLAST of Spg034960 vs. ExPASy TrEMBL
Match: A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 4.7e-30
Identity = 102/293 (34.81%), Postives = 142/293 (48.46%), Query Frame = 0


Query: 284 VVREFYANIDKEDGFQVIVRGVELS-------------DAVRE----------------- 343
           +VREFYAN+   +   + VRGV++S             D V E                 
Sbjct: 16  LVREFYANLTDPEENTIYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIENITEPELITVL 75

Query: 344 --VGIEGAQWQLSKTGKRTFQSAYLKREANTWMGFIRQRMLPTTHDSTVSRERVLLAFAI 403
             V   GA+W +S  G  T   + L   A  W  F++ R+LPTTH   VS++R+LL  ++
Sbjct: 76  ETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKIVSKDRMLLLHSM 135

Query: 404 LRSLSIDVGKMIVNEISGCWKKKVGKLFFPNTITMLCRRAGVPVDEGDVILFDKGIIDTP 463
           L   SI+VG+MI +EI  C  +K G LFFP+ IT LCR A   V+E    L + G ID  
Sbjct: 136 LNGKSINVGRMIHSEIRACAAQKTGALFFPSLITRLCRNAPFLVNEEK--LHNTGEIDAI 195

Query: 464 NLARL------QRTQE-----------ARQGGLIYGINMVLEQLALSASRQEFAERQALT 523
            +AR+      + TQ+           +R  G +      LEQ     S+QE   +Q   
Sbjct: 196 AVARITQEGPTESTQQPSSSRPAAASSSRTNGDVLQQLKALEQ---RLSQQEHTHKQQQQ 255

Query: 524 FWNYVRNRDANLKKALQENFSKPYPALPAFPEDLLNPWIPPPPVEREEEDDEE 528
           FW Y + RD  LKKALQ NF++P P  PAFP+++L         E E E D++
Sbjct: 256 FWAYSKERDTALKKALQNNFTRPIPTFPAFPQEILQDL----DYEYEAESDKD 299

[Close]

BLAST of Spg034960 vs. ExPASy TrEMBL
Match: A0A5D2B8V0 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D09G036700v1 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.7e-25
Identity = 79/234 (33.76%), Postives = 118/234 (50.43%), Query Frame = 0


Query: 226 EHGRFINNFARAKYAELLK-RDFLFERGFSCN------LPHFLRTGIADHGWERFCSKPE 285
           E+   I+   + ++  + K +  + E+GF         +P  +R  I    WERFC    
Sbjct: 14  ENSILIDEEVKERFDSIFKHQPMMSEKGFGLKSNDLMVVPIPIRKKINALKWERFCDVRS 73

Query: 286 AVNAQVVREFYANIDKEDGFQVIVRGVE------LSDAVREVGIEGAQWQLSKTGKRTFQ 345
             + ++VREFYA++  +D  +VIVR         L   +  V   G+QW +   G  + Q
Sbjct: 74  LPDDELVREFYASLTTQDATEVIVRKKSNINWDFLQQVLDVVTNLGSQWIIRNYGSHSCQ 133

Query: 346 SAYLKREANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKMIVNEISGCWK 405
             YLK  A  W  F+R   +P +H ST+S E +LL +AIL   SI+VGK+I+ EI  C K
Sbjct: 134 REYLKPVAKVWFYFVRYSFMPISHSSTISMEWMLLLYAILTEKSINVGKIILKEIQNCAK 193

Query: 406 KKVGKLFFPNTITMLCRRAGVPVDEGDVILFDKGIIDTPNLARL-QRTQEARQG 446
           KK    +FP+ IT LC +A V +       + +G I   +L RL +R  E  QG
Sbjct: 194 KKARSAYFPSLITSLCLKAHVKIQANLKGRYVQGCITNYDLERLVERVHELNQG 247

[Close]

BLAST of Spg034960 vs. ExPASy TrEMBL
Match: A0A2P5DAQ2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_080440 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.7e-24
Identity = 69/204 (33.82%), Postives = 99/204 (48.53%), Query Frame = 0


Query: 243 LKRDFLFERGFSCNLPHFLRTGIADHGWERFCSKPEAVNAQVVREFYANIDKEDGFQVIV 302
           ++++F+++       P F+   I  H W+ FC+ PE     +VREFY N+   D   V +
Sbjct: 66  VEKEFVWDNSKPLEQPPFIADVIIQHNWQLFCAHPEDPIVPLVREFYTNMTNPDDDTVYI 125

Query: 303 RGVE-------------LSDAVRE-------------------VGIEGAQWQLSKTGKRT 362
           RGV+             L D + E                   V I GA+W +S  G  T
Sbjct: 126 RGVQVPLSVEAINTIFSLGDPIDEHSEFVEDITKPELVIVLETVAIVGAEWNVSSQGAYT 185

Query: 363 FQSAYLKREANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKMIVNEISGC 415
              + L   A  W  F++ R+LPTTH  TVS+E V L +++L   SI+VG+MI  EI  C
Sbjct: 186 CLRSSLNPPAKVWYHFLKSRLLPTTHGKTVSKEHVSLLYSMLTGKSINVGRMIHREICAC 245

[Close]

BLAST of Spg034960 vs. ExPASy TrEMBL
Match: A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.9e-24
Identity = 87/273 (31.87%), Postives = 128/273 (46.89%), Query Frame = 0


Query: 201 ERLLKRRAEKGKIVAEASEEPDEIEEHGRFINNFARAKYAELLKRDFLFERGFSCNLPHF 260
           +R+ ++  +  K   EA+E   E     R +N           ++ F+ +   +     F
Sbjct: 4   KRVARKAHKAVKFETEAAETRYENNIQNRPLN----------AEKGFVLDNSETMGQLPF 63

Query: 261 LRTGIADHGWERFCSKPEAVNAQVVREFYANIDKEDGFQVIVRGVELS------------ 320
           +   I  H W++FC+ PE     +VREFYAN+       V VRGV++S            
Sbjct: 64  IAQVITQHNWKQFCAHPEDPIVPLVREFYANLTDPVENTVYVRGVQVSWSEEAINAVFGL 123

Query: 321 -DAVRE-------------------VGIEGAQWQLSKTGKRTFQSAYLKREANTWMGFIR 380
            D V E                   V + GA+W +S  G  T   + L   A  W  F++
Sbjct: 124 GDPVDEHSEFIENITEHDLITVLETVAVAGAEWNVSAQGAYTCIRSALTPAAKVWFHFLK 183

Query: 381 QRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKMIVNEISGCWKKKVGKLFFPNTITMLC 440
             +LPTTH  TVS++R+LL  ++L   SI+VG+MI +EI  C  +K G LFFP+ IT LC
Sbjct: 184 SHLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLC 243

Query: 441 RRAGVPVDEGDVILFDKGIIDTPNLARLQRTQE 442
           R A  P    +  L + G ID   +AR+  TQE
Sbjct: 244 RNARAPFLVNEEKLHNTGEIDAIAVARI--TQE 264

The following BLAST results are available for this feature:

BLAST of Spg034960 vs. NCBI nr


Match Name	E-value	Identity	Description
PON46472.1	2.0e-35	31.38	hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]	[more]
PON78020.1	9.7e-30	34.81	hypothetical protein PanWU01x14_023740 [Parasponia andersonii]	[more]
TYG52543.1	5.5e-25	33.76	hypothetical protein ES288_D09G036700v1 [Gossypium darwinii]	[more]
PON70375.1	3.6e-24	33.82	hypothetical protein PanWU01x14_080440 [Parasponia andersonii]	[more]
PON35554.1	6.1e-24	31.87	hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]	[more]

BLAST of Spg034960 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg034960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P5BCG4	9.8e-36	31.38	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
A0A2P5DXM3	4.7e-30	34.81	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE...	[more]
A0A5D2B8V0	2.7e-25	33.76	Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D09G036700v1 PE=...	[more]
A0A2P5DAQ2	1.7e-24	33.82	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_080440 PE...	[more]
A0A2P5AGA5	2.9e-24	31.87	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]

BLAST of Spg034960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 73..120
None	No IPR available	COILS	Coil	Coil	coord: 169..211
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg034960.1	Spg034960.1	mRNA