Spg034894 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg034894
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiongeneral transcription factor 3C polypeptide 5-like
Locationscaffold3: 24869542 .. 24874581 (+)
RNA-Seq ExpressionSpg034894
SyntenySpg034894
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGCCACAAGAGAACTCTGAAAGCACAACCTATCACCACCTTGGCTTTTCCTTTCAAGTTCCACGCTCTCAGCCCCTCCATGAGCCAATCATCAATTTTCTTGGGAATACAAAAAGAAACTCCCAGCATCTTGGCCAAGTAGGTCCAAGATCAGTAGGCAAACTCACAATGAAGAAATAAGTGATCTAGGATCTCGAGGGTAGGAGGGGCCAAGTCCTAACTTCTTTTGCAATATGTCATCAGTATTTGGACTTCTATAAGCCAAAGACCGTAGGAAGACTTTGACTTTTTTCAGACATTTGTGCTTCCAGATCAGGCTAGTCAAAGTTGTGTTGACTTTAGTGGGTTTTGCTGCCAATGTGTGAAAGGCTGATCTGCTAGAGTAGACACCAGAGCCTTCCAGGGACCAAAAGATCCTGACTACATTCGCCCCCAGCTGAACTGGATTAAGCTTTTCTATAAGCAATACCCAATTCTGAAGCTCTCTATCAAATGATCCTCTTCTGAGGCCTAAGTTCCAAGCTTGTTTTCATTGTCCCCAACACTCGAAAATAAGAGCCTCTTTTTGGAAGAGACTGCATAAATATCTGGGAAGCACATTTTCAAAGGAATTGGATCAACCCAAGGGTGGTCCTAGAAACGAATGATCTTCCCACAGCCTACTTTGAATTTCATAAACGGCAAGAAGAAGGGAAGGTTCTTGATGTTATCCACCCACGGTCTATTGCCTCTTTTACCGCTAAACTTTGCAGTCATCCACCCTTGTGGAAAGGTCCCATAGATGCTCGAGATAACCCTCTTCCAAAGAACGTGCTCCTCTTGAGTGAACCTCCAAATCCATTTGGTGAGGAAGGCTGTATTTCAATGCATGAGGGATCCCACTCCCAATCTCCCTGATGGGGTTGGATGAGCCATCCAACTCCACTTGACTAAGTTACTTCCAGGCTTGAACACCCCACCATTCCAAATTATTTATTGGATATTCATCTCAAGATATTTGTAACAATTGGGAGGAGGCTTTTCTGTAGTTTCAAGAAGGGTTTTCTCCCTTGTTTTGCTGCTTTATTCTGCTTTTTTCTATCTTTATTGTTGATCTTCTTTTCTTCTTCCCAAAAAGACTATTCTTTGTAGGCTTGTTTCTTTTTTCCAATCTTTTGTAACATTTGATAGATTACTATACGAACTGAAAACTTATTACTATTTTGTTTTATTTTCAGGTTAAAAACACCTGCCATGTTTGTTCAGAAAAAGAAATCAGAAACTGTACATATTCCTTGCGAGGTAAAAGCTTTCTTGCAGCTAGTTTCGGTAGTCGAAGAGTAGAGCTTTATTTATTACTACTACTACTACTATTATTATGTGCTATTAGTTTTATCACGTGTCTTCCATGTATTTGTATACTGGCCATTAGAAAGTGTTTTAGTCATTATGTAGGTGATTTTGACATTTTTTATTCTAGAGTAATTTTGGATGCGATTTTTGTTTTGCGCTGGATTCATCTTTTTGTTTCACTTTGCATTATATTTTTCAAATGTTTTTAACTAATATTCTTGTTTCCATGCTTTGCAGGTGGACGTAGAACCTGTTCTTGCAATTGATTTTAACATTAAAGATATCCTTGTTCACTTAAGCTGCTAATTTATTAATTGATATTATTTTTTCTGTTCTTGTGAAAAACTAACAGTATGTTTTGGTTGCATTAGTTTCCGGTTTTCCTTTGACTACTTTTCATGCATGGTTAATTGATAGTATGATAAGTGGTATACATAATAAATATCAACCCCATGTTAGAAAGATCATTTTTAAATTGATAGCCTACTTGTGCATATCTTAGTGGATAAGACACCAATTACTATCTCCTAGATCGATGGTTTGATCTCCACTTCCAAAATTGTTGAACTAAAAGAAATATTTATTGATTGGATCACACCAAGTTTAAATCAATTATGGGAAAAAATAAATAAAGTGGTAAGTCAAACACCAGAACCAACTATAAAAACCTAATTAAAGAAAATTAAGAACTAGAAACCAATTCATAGCTCCACCATTAGGTGTGGGGTTTTCCCCTATTTCATTAATCAATGATTTATCTCTCCAAAAAAAAAAACCAATTCATAGGTATGTATATTTCTATGAATAATTTTTACAAATTGGTCGTCTAGATTTTTGTTAGGGATGTCTGTCGGTCGGTCGGTGTCGGTTTTGGATGAAAACCGATGCCGAAAACCAACCTATCGCTTTCGGTCGGTTGGTGGTCGATGATTTTGAGATGCTCCATGAAACCGACCGACCAAATACACGGTCGGTCGGTCGGTTTGTCGGTTTTGAGATATTGCCGGAAAATGCTCGATGTAGAAGAAAAAACGTTCAGAAAGTTGAAAGAAAGAAGAGATAGAGAGTAACTAGGGGAAGAGAAATAAAAACGAAGAAGATAGTAAGATCTGGACCATATTTTATGGAACTGCGAGTTTGCTTGTTCGATATGGGGTTTGTTTCACAACGCATTTGGGCTTCAGGCGAGACCCTTTAGAGACTACAGGGAGATGATCCAGGAGTTCCTCCTCCATCTGCCGTTTCGCGATAAGGGGAGTTTTTTATGGTTAGCTGGGGTGTGTGTTGTGTTATAGGGTCTTTGGGGTGAGAGGAATAATAGGGTGTTTCGAGGTCTTGAGAGGAGTCCTTTCGATGTATGGGTTCTCACTAGATTCTATGTTTCTCTCTGGGCCTTGGTGTCTAAGGCTTTTTGTAATTACTCTTTAGGTTGCATTATCTTGGACTGGCAACCCTTCCTTTAAAGGGGGGTCTTTTTGTGGGCTGGTTTTTTTATGTGGCCTTGTATTCTTTCATTTTTTGTCAATGAAAGTTGGTATTATTATTATTGTAAAAAAAGAAAAAAGAAAAAATGGAAGTTTGGTGAGAAAAAGGGAAGGAAAAGAAAGGGAGGAAAAGAAGAGGGAAGAAGAAGAGAGATGAAAAGAGAAAGGAAAGAATAAGAAGGAAGGAGAAAAGAGGGAAGAAGAAATCGGTGAGGGAGGGAAAGAGAAAGAGAAAGAGAAAAGAGAAAGGAAAGAAGAAGAATGAAGAAGAAATCGTGGGGGAGGGAGAGGGAGAGAGAGATAGAAAAGAAATAAAAAAGTAATATTTAAAAGTCATTATGACTCTTAATTTGAGAGGATATCACACAAGATTCAAGAAAAAAAAAGAAGAAAAGACTGCACACTGCACACTGCACAATGCACAATGCTGTGTGCAGTGAGCATGCAACCAGCAGGCAATGTTTTAATCCTTTTTTTTAAATTTTTTTATTATTATTATTTTTTCTAATGTGAAAGTCAGTCGATTTTTGCTGTTTTTAGTAGACCGACCGACCGACGGTATAGAGGAAAACCGACCGACGTCGGATTCGATCGGTTGAGTCGGTTTTCGGTCTAATTTTGAACACCCCTAATTTTTGTTGAATCTTCAACCATTTGGGTTTCTTACATGAATTGATCTGTTTAAGATTATTATTTCTCAATGGTCATCTGTAAGTTTGATGCTGCGTGTCTTTATGCTCCTAAAAGTTTTGAGGTTTGCTAAGAATTTAATTTGTTTAAGTGAACCTTGAAGGCAATCTTTTTTTTTTAAATTATTTTTGGCACTTTCTTCTTTTATTGGACTTAACATTCTTACATATTCCAAAGACGGTAATCTGGGAGAAGTACATACCCCAAGGCTCAGATGAATGGGATTTTCAGGTTGCTGTATCTAAGTTGTTTGAAGAACGTCCTATATGGCCAAAGGAGTCTCTAGTTGAACGAATGCTTGATATGGGCTTAGTTTTCAGACATGGAACGTTTAGAAGGTTTTGACTTCCAAGCTACTCTCCGTTCATGATATTTTCTTTTTATCATCCGTGGATAGAACTCATGTGGTCGTGTTGGCTTAAATTTTTTATTGTGCAGGCTTCTTTCTAGAATTGCATATTACTTTTCAAGTGGACCTTTTCAAAGATTTTGGATAAAAAAGGGTTATGATCCTCGAAAAGATTGTGATTCTCGCATGTGAGCACTCTGTTTAAACAATAGAAATTTTCTATATTTTAATTTCTTCCCTTCATTTCCTCGGTTCATTGCATGCTCATACACCATAACTACGAAACTAACCTGACTTATGGTCAAGATTTTACCGCTTTATGGTTTTTTCTAGGGACTGTTAAAAAACGTCATCTCAATAAGAGATTAACTTGCATATCTCAATAACACATTATGAATTTTCTCAACTGACCTATGGCTTGCTGGTGTGTGTGCTGTTTCATGGGGTTTGTGGGGAGAGAGAAATAATAGGGTTTTTAGAGGATTGGAGAGGTTCCCATTTGATGTGTGAGCCCTCAATAGATTCCATGTTTTTCTCTGGGGCTTCAGTTTGAAGGCCTTTTGTAATTATTCGATAGGTATTATTAATCTTGATTAGAGTCCCTTCCTATAGTGGGGTTCCCTTTTGGGACTGGTTTTTTTGGATGACCTTGTATTCTTTCATTTTTTCTCAATGAAAGTTGGTATTTTCTAAAAAAAAAACATTTATTCACAAATATAAACCCCATATAAGAAATCATAAATATTATTTAAGTTATGAGTTGTCTGTTCTATATTATATATTGACACTTCCACTATAACAGATACCAACGAATTGATTTTCGAGTACCCCTGTCATTACGAAGTTATTGCAATTCCAATGCTTCCAACAAGTAAGTTTGATTTTACCATAAGTTCTGTACAACATAAGGCAGTAAGAACTAGAATTTCGTTGTAACGCATTTGACTTAAGTTGATTAGTACTGAAATGGTCTCTCGTTTGTTACCTCATCATTTCTGTGTTTCAATTTTTCCTCCCACATAGGTTGAGTAATGGACATGCAGAGATAACTGCATTTCAAGTTTTTCCCCACAAGTTTCAAACATCATTGCAACTTTTTGAACTTGAAGATGAGTATATTCAAGAAGAGATAAGAAAACCCTCCGAGGAAACATCTTGTTCAGTGAGTTTATCAAGTTATTAA

mRNA sequence

ATGTGCCACAAGAGAACTCTGAAAGCACAACCTATCACCACCTTGGCTTTTCCTTTCAAGTTCCACGCTCTCAGCCCCTCCATGAGCCAATCATCAATTTTCTTGGGAATACAAAAAGAAACTCCCAGCATCTTGGCCAAGTTAAAAACACCTGCCATGTTTGTTCAGAAAAAGAAATCAGAAACTGTACATATTCCTTGCGAGGTGGACGTAGAACCTGTTCTTGCAATTGATTTTAACATTAAAGATATCCTTGCGAGACCCTTTAGAGACTACAGGGAGATGATCCAGGAGTTCCTCCTCCATCTGCCGTTTCGCGATAAGGGGAGTTTTTTATGGTTAGCTGGGGTTGCATTATCTTGGACTGGCAACCCTTCCTTTAAAGGGGGGTCTTTTTTGAACCTTGAAGGCAATCTTTTTTTTTTAAATTATTTTTGGCACTTTCTTCTTTTATTGGACTTAACATTCTTACATATTCCAAAGACGGTAATCTGGGAGAAGTACATACCCCAAGGCTCAGATGAATGGGATTTTCAGGTTGCTGTATCTAAGTTGTTTGAAGAACGTCCTATATGGCCAAAGGAGTCTCTAGTTGAACGAATGCTTGATATGGGCTTAGTTTTCAGACATGGAACGTTTAGAAGGCTTCTTTCTAGAATTGCATATTACTTTTCAAGTGGACCTTTTCAAAGATTTTGGATAAAAAAGGGTTATGATCCTCGAAAAGATTGTGATTCTCGCATATACCAACGAATTGATTTTCGAGTACCCCTGTCATTACGAAGTTATTGCAATTCCAATGCTTCCAACAAGTTGAGTAATGGACATGCAGAGATAACTGCATTTCAAGTTTTTCCCCACAAGTTTCAAACATCATTGCAACTTTTTGAACTTGAAGATGAGTATATTCAAGAAGAGATAAGAAAACCCTCCGAGGAAACATCTTGTTCAGTGAGTTTATCAAGTTATTAA

Coding sequence (CDS)

ATGTGCCACAAGAGAACTCTGAAAGCACAACCTATCACCACCTTGGCTTTTCCTTTCAAGTTCCACGCTCTCAGCCCCTCCATGAGCCAATCATCAATTTTCTTGGGAATACAAAAAGAAACTCCCAGCATCTTGGCCAAGTTAAAAACACCTGCCATGTTTGTTCAGAAAAAGAAATCAGAAACTGTACATATTCCTTGCGAGGTGGACGTAGAACCTGTTCTTGCAATTGATTTTAACATTAAAGATATCCTTGCGAGACCCTTTAGAGACTACAGGGAGATGATCCAGGAGTTCCTCCTCCATCTGCCGTTTCGCGATAAGGGGAGTTTTTTATGGTTAGCTGGGGTTGCATTATCTTGGACTGGCAACCCTTCCTTTAAAGGGGGGTCTTTTTTGAACCTTGAAGGCAATCTTTTTTTTTTAAATTATTTTTGGCACTTTCTTCTTTTATTGGACTTAACATTCTTACATATTCCAAAGACGGTAATCTGGGAGAAGTACATACCCCAAGGCTCAGATGAATGGGATTTTCAGGTTGCTGTATCTAAGTTGTTTGAAGAACGTCCTATATGGCCAAAGGAGTCTCTAGTTGAACGAATGCTTGATATGGGCTTAGTTTTCAGACATGGAACGTTTAGAAGGCTTCTTTCTAGAATTGCATATTACTTTTCAAGTGGACCTTTTCAAAGATTTTGGATAAAAAAGGGTTATGATCCTCGAAAAGATTGTGATTCTCGCATATACCAACGAATTGATTTTCGAGTACCCCTGTCATTACGAAGTTATTGCAATTCCAATGCTTCCAACAAGTTGAGTAATGGACATGCAGAGATAACTGCATTTCAAGTTTTTCCCCACAAGTTTCAAACATCATTGCAACTTTTTGAACTTGAAGATGAGTATATTCAAGAAGAGATAAGAAAACCCTCCGAGGAAACATCTTGTTCAGTGAGTTTATCAAGTTATTAA

Protein sequence

MCHKRTLKAQPITTLAFPFKFHALSPSMSQSSIFLGIQKETPSILAKLKTPAMFVQKKKSETVHIPCEVDVEPVLAIDFNIKDILARPFRDYREMIQEFLLHLPFRDKGSFLWLAGVALSWTGNPSFKGGSFLNLEGNLFFLNYFWHFLLLLDLTFLHIPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNKLSNGHAEITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCSVSLSSY
Homology
[Close]
BLAST of Spg034894 vs. NCBI nr
Match: XP_023530657.1 (general transcription factor 3C polypeptide 5-like [Cucurbita pepo subsp. pepo] >XP_023530658.1 general transcription factor 3C polypeptide 5-like [Cucurbita pepo subsp. pepo] >XP_023530659.1 general transcription factor 3C polypeptide 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 332.0 bits (850), Expect = 5.6e-87
Identity = 175/279 (62.72%), Postives = 185/279 (66.31%), Query Frame = 0 

Query: 39  KETPSILAKLKTPAMFVQKKKSETVHIPCEVDVEPVLAIDFNIKDILARPFRDYREMIQE 98
           K+ P  L  LKTP+MF  +KK ET H PCEVD+EPVLAIDFNIKD               
Sbjct: 178 KDVPESLV-LKTPSMFTPRKKQETPHTPCEVDIEPVLAIDFNIKD--------------- 237

Query: 99  FLLHLPFRDKGSFLWLAGVALSWTGNPSFKGGSFLNLEGNLFFLNYFWHFLLLLDLTFLH 158
                                                                       
Sbjct: 238 ------------------------------------------------------------ 297

Query: 159 IPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLS 218
           IPKTVIWEKY+PQGS+EWDFQVAVS LFEERPIWPKESLVERML MGLVFRHG FRRLLS
Sbjct: 298 IPKTVIWEKYVPQGSEEWDFQVAVSNLFEERPIWPKESLVERMLKMGLVFRHGVFRRLLS 357

Query: 219 RIAYYFSSGPFQRFWIKKGYDPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNKLSNGHAE 278
           RIAYYFSSGPFQRFWIKKGYDPRKDCDSR YQRIDFRVP SLRSYCNSNASN++S  H +
Sbjct: 358 RIAYYFSSGPFQRFWIKKGYDPRKDCDSRKYQRIDFRVPQSLRSYCNSNASNEMSYAHEK 380

Query: 279 ITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS 318
           I AFQVFPHKFQTSLQLFELEDEYIQEEI+KPSEETSCS
Sbjct: 418 ICAFQVFPHKFQTSLQLFELEDEYIQEEIKKPSEETSCS 380

[Close]
BLAST of Spg034894 vs. NCBI nr
Match: XP_022927790.1 (general transcription factor 3C polypeptide 5-like [Cucurbita moschata] >XP_022927791.1 general transcription factor 3C polypeptide 5-like [Cucurbita moschata] >XP_022927792.1 general transcription factor 3C polypeptide 5-like [Cucurbita moschata] >XP_022927793.1 general transcription factor 3C polypeptide 5-like [Cucurbita moschata])

HSP 1 Score: 330.9 bits (847), Expect = 1.3e-86
Identity = 174/279 (62.37%), Postives = 185/279 (66.31%), Query Frame = 0 

Query: 39  KETPSILAKLKTPAMFVQKKKSETVHIPCEVDVEPVLAIDFNIKDILARPFRDYREMIQE 98
           K+ P  L  LKTP+MF  +KK ET H PCEVD+EPVLAIDFNIKD               
Sbjct: 178 KDVPESLV-LKTPSMFTPRKKQETPHTPCEVDIEPVLAIDFNIKD--------------- 237

Query: 99  FLLHLPFRDKGSFLWLAGVALSWTGNPSFKGGSFLNLEGNLFFLNYFWHFLLLLDLTFLH 158
                                                                       
Sbjct: 238 ------------------------------------------------------------ 297

Query: 159 IPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLS 218
           IPKTVIWEKY+PQGS+EWD+QVAVS LFEERPIWPKESLVERML MGLVFRHG FRRLLS
Sbjct: 298 IPKTVIWEKYVPQGSEEWDYQVAVSNLFEERPIWPKESLVERMLKMGLVFRHGVFRRLLS 357

Query: 219 RIAYYFSSGPFQRFWIKKGYDPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNKLSNGHAE 278
           RIAYYFSSGPFQRFWIKKGYDPRKDCDSR YQRIDFRVP SLRSYCNSNASN++S  H +
Sbjct: 358 RIAYYFSSGPFQRFWIKKGYDPRKDCDSRKYQRIDFRVPQSLRSYCNSNASNEMSYAHEK 380

Query: 279 ITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS 318
           I AFQVFPHKFQTSLQLFELEDEYIQEEI+KPSEETSCS
Sbjct: 418 ICAFQVFPHKFQTSLQLFELEDEYIQEEIKKPSEETSCS 380

[Close]
BLAST of Spg034894 vs. NCBI nr
Match: XP_022989615.1 (general transcription factor 3C polypeptide 5-like [Cucurbita maxima] >XP_022989616.1 general transcription factor 3C polypeptide 5-like [Cucurbita maxima] >XP_022989617.1 general transcription factor 3C polypeptide 5-like [Cucurbita maxima] >XP_022989618.1 general transcription factor 3C polypeptide 5-like [Cucurbita maxima])

HSP 1 Score: 328.6 bits (841), Expect = 6.2e-86
Identity = 173/279 (62.01%), Postives = 185/279 (66.31%), Query Frame = 0 

Query: 39  KETPSILAKLKTPAMFVQKKKSETVHIPCEVDVEPVLAIDFNIKDILARPFRDYREMIQE 98
           K+ P  L  LKTP+MF  +KK ET H PCEVD+EPVLAIDFNIKD               
Sbjct: 178 KDVPESLV-LKTPSMFTPRKKQETPHTPCEVDIEPVLAIDFNIKD--------------- 237

Query: 99  FLLHLPFRDKGSFLWLAGVALSWTGNPSFKGGSFLNLEGNLFFLNYFWHFLLLLDLTFLH 158
                                                                       
Sbjct: 238 ------------------------------------------------------------ 297

Query: 159 IPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLS 218
           IPKTVIWEK++PQGS+EWDFQVAVS LFEERPIWPKESLVERML MGLVFRHG FRRLLS
Sbjct: 298 IPKTVIWEKFVPQGSEEWDFQVAVSNLFEERPIWPKESLVERMLKMGLVFRHGVFRRLLS 357

Query: 219 RIAYYFSSGPFQRFWIKKGYDPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNKLSNGHAE 278
           RIAYYFSSGPFQRFWIKKGYDPRKDCDSR YQRIDFRVP SLRSYCNSNAS+++S  H +
Sbjct: 358 RIAYYFSSGPFQRFWIKKGYDPRKDCDSRKYQRIDFRVPQSLRSYCNSNASDEMSYAHEK 380

Query: 279 ITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS 318
           I AFQVFPHKFQTSLQLFELEDEYIQEEI+KPSEETSCS
Sbjct: 418 ICAFQVFPHKFQTSLQLFELEDEYIQEEIKKPSEETSCS 380

[Close]
BLAST of Spg034894 vs. NCBI nr
Match: XP_008465056.1 (PREDICTED: general transcription factor 3C polypeptide 5-like isoform X1 [Cucumis melo] >XP_008465057.1 PREDICTED: general transcription factor 3C polypeptide 5-like isoform X1 [Cucumis melo] >XP_016903319.1 PREDICTED: general transcription factor 3C polypeptide 5-like isoform X1 [Cucumis melo])

HSP 1 Score: 313.5 bits (802), Expect = 2.1e-81
Identity = 170/283 (60.07%), Postives = 184/283 (65.02%), Query Frame = 0 

Query: 39  KETPSILAKLKTPAMFVQKKKSETVHIP----CEVDVEPVLAIDFNIKDILARPFRDYRE 98
           K+ P  L  LKTP +++ +KKSETV  P    CEVD+EPVLAIDFNIKD           
Sbjct: 178 KDVPENLV-LKTPGIYIPRKKSETVQNPCEVICEVDIEPVLAIDFNIKD----------- 237

Query: 99  MIQEFLLHLPFRDKGSFLWLAGVALSWTGNPSFKGGSFLNLEGNLFFLNYFWHFLLLLDL 158
                                                                       
Sbjct: 238 ------------------------------------------------------------ 297

Query: 159 TFLHIPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFR 218
               IPKTVIWEKY+PQGSDEWDFQVAVSKLFEERPIWPK+SLV+RMLDMGL F HG  R
Sbjct: 298 ----IPKTVIWEKYVPQGSDEWDFQVAVSKLFEERPIWPKDSLVQRMLDMGLAFSHGVLR 357

Query: 219 RLLSRIAYYFSSGPFQRFWIKKGYDPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNKLSN 278
           RLLSRIAYYFSSGPFQRFWIKKGYDPRKD +SRIYQRIDFRVP+SLRSYCNS+AS+KL  
Sbjct: 358 RLLSRIAYYFSSGPFQRFWIKKGYDPRKDRNSRIYQRIDFRVPVSLRSYCNSSASSKLCY 384

Query: 279 GHAEITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS 318
           GHA I AFQVFP KFQTSLQLFEL+DEYIQEEIRKPSEE SCS
Sbjct: 418 GHAGICAFQVFPRKFQTSLQLFELQDEYIQEEIRKPSEEASCS 384

[Close]
BLAST of Spg034894 vs. NCBI nr
Match: XP_004142476.1 (general transcription factor 3C polypeptide 5 isoform X2 [Cucumis sativus] >KAE8648884.1 hypothetical protein Csa_008022 [Cucumis sativus])

HSP 1 Score: 313.5 bits (802), Expect = 2.1e-81
Identity = 169/283 (59.72%), Postives = 185/283 (65.37%), Query Frame = 0 

Query: 39  KETPSILAKLKTPAMFVQKKKSETVHIP----CEVDVEPVLAIDFNIKDILARPFRDYRE 98
           K+ P  L  LKTPA+++ +KKSETV  P    CEVD+EPVLAIDFNIKD           
Sbjct: 177 KDVPENLV-LKTPAIYIPRKKSETVQNPCEVICEVDIEPVLAIDFNIKD----------- 236

Query: 99  MIQEFLLHLPFRDKGSFLWLAGVALSWTGNPSFKGGSFLNLEGNLFFLNYFWHFLLLLDL 158
                                                                       
Sbjct: 237 ------------------------------------------------------------ 296

Query: 159 TFLHIPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFR 218
               IPKTVIWEKY+PQGSDEWD+QVAVSKLFEERPIWPK+SLV+RMLDMGL F HG  R
Sbjct: 297 ----IPKTVIWEKYVPQGSDEWDYQVAVSKLFEERPIWPKDSLVQRMLDMGLAFSHGVLR 356

Query: 219 RLLSRIAYYFSSGPFQRFWIKKGYDPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNKLSN 278
           RLLSRIAYYFSSGPFQRFWIKKGYDPRKD +S+IYQRIDFRVP+SLRSYCNSNASN+L  
Sbjct: 357 RLLSRIAYYFSSGPFQRFWIKKGYDPRKDRNSKIYQRIDFRVPVSLRSYCNSNASNELCY 383

Query: 279 GHAEITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS 318
           GHA I+AFQVFP KFQTSLQLFEL+DEYIQEEIRKPSEE  CS
Sbjct: 417 GHAGISAFQVFPRKFQTSLQLFELQDEYIQEEIRKPSEEALCS 383

[Close]
BLAST of Spg034894 vs. ExPASy Swiss-Prot
Match: Q9Y5Q8 (General transcription factor 3C polypeptide 5 OS=Homo sapiens OX=9606 GN=GTF3C5 PE=1 SV=2)

HSP 1 Score: 64.7 bits (156), Expect = 2.2e-09
Identity = 30/78 (38.46%), Postives = 47/78 (60.26%), Query Frame = 0 

Query: 184 KLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWIKKGYDPRKD 243
           KLF+ RPIW + +     +   +       + LL  IAYY  +GP++  WI+ GYDPRK+
Sbjct: 256 KLFDIRPIWSRNA-----VKANISVHPDKLKVLLPFIAYYMITGPWRSLWIRFGYDPRKN 315

Query: 244 CDSRIYQRIDFRVPLSLR 262
            D++IYQ +DFR+   ++
Sbjct: 316 PDAKIYQVLDFRIRCGMK 328

[Close]
BLAST of Spg034894 vs. ExPASy Swiss-Prot
Match: Q8R2T8 (General transcription factor 3C polypeptide 5 OS=Mus musculus OX=10090 GN=Gtf3c5 PE=2 SV=2)

HSP 1 Score: 64.3 bits (155), Expect = 2.9e-09
Identity = 31/97 (31.96%), Postives = 53/97 (54.64%), Query Frame = 0 

Query: 165 WEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYF 224
           W+K      D+   +  + KLF+ RP+W + +     +   +       + LL  +AYY 
Sbjct: 238 WKKACTNPIDQ-KVEEELRKLFDIRPVWSRNA-----VKSNVSVHPDKLKILLPYMAYYM 297

Query: 225 SSGPFQRFWIKKGYDPRKDCDSRIYQRIDFRVPLSLR 262
            +GP++  WI+ GYDPRK  D++IYQ +DFR+   ++
Sbjct: 298 ITGPWRSLWIRFGYDPRKHPDAKIYQVLDFRIRCGMK 328

[Close]
BLAST of Spg034894 vs. ExPASy Swiss-Prot
Match: Q54GS8 (General transcription factor 3C polypeptide 5 OS=Dictyostelium discoideum OX=44689 GN=gtf3c5 PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 8.4e-09
Identity = 32/92 (34.78%), Postives = 54/92 (58.70%), Query Frame = 0 

Query: 185 LFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDC 244
           LFE+RPIW   SL++++   G +  H   +R+L  +A+ F  GP+++ W+K G+DPR   
Sbjct: 319 LFEKRPIWLYISLLDKVQKEGGLVAH--TKRVLPSLAFNFVDGPWRKCWVKLGFDPRIHP 378

Query: 245 DSRIYQRIDFRVPLSLRSYCNSNASNKLSNGH 277
           ++  YQ IDFR+      Y ++  S   +N +
Sbjct: 379 ETSQYQTIDFRISEQDNHYPSNQPSKNNNNNN 408

[Close]
BLAST of Spg034894 vs. ExPASy Swiss-Prot
Match: O14229 (Transcription factor tau subunit sfc1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sfc1 PE=1 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 2.3e-06
Identity = 28/79 (35.44%), Postives = 49/79 (62.03%), Query Frame = 0 

Query: 181 AVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWIKKGYDP 240
           A+  LFE+RP+W + +L+   LD    + H   +  L  ++Y ++SGPF+  + + GYDP
Sbjct: 224 ALKPLFEKRPVWTRRALLNH-LDPS--YTH-YLKFALPYLSYLWTSGPFRDTYTRFGYDP 283

Query: 241 RKDCDSRIYQRIDFRVPLS 260
           RKD ++  YQ + F++ L+
Sbjct: 284 RKDSNAAAYQALFFKLKLN 298

[Close]
BLAST of Spg034894 vs. ExPASy TrEMBL
Match: A0A0A0KV91 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G630700 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 6.3e-92
Identity = 186/283 (65.72%), Postives = 203/283 (71.73%), Query Frame = 0 

Query: 39  KETPSILAKLKTPAMFVQKKKSETVHIP----CEVDVEPVLAIDFNIKDILARPFRDYRE 98
           K+ P  L  LKTPA+++ +KKSETV  P    CEVD+EPVLAIDFNIKDIL         
Sbjct: 177 KDVPENLV-LKTPAIYIPRKKSETVQNPCEVICEVDIEPVLAIDFNIKDIL--------- 236

Query: 99  MIQEFLLHLPFRDKGSFLWLAGVALSWTGNPSFKGGSFLNLEGNLFFLNYFWHFLLLLDL 158
                                                 +NLE NLF         LLLDL
Sbjct: 237 --------------------------------------VNLEHNLF---------LLLDL 296

Query: 159 TFLHIPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFR 218
           TFLHIPKTVIWEKY+PQGSDEWD+QVAVSKLFEERPIWPK+SLV+RMLDMGL F HG  R
Sbjct: 297 TFLHIPKTVIWEKYVPQGSDEWDYQVAVSKLFEERPIWPKDSLVQRMLDMGLAFSHGVLR 356

Query: 219 RLLSRIAYYFSSGPFQRFWIKKGYDPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNKLSN 278
           RLLSRIAYYFSSGPFQRFWIKKGYDPRKD +S+IYQRIDFRVP+SLRSYCNSNASN+L  
Sbjct: 357 RLLSRIAYYFSSGPFQRFWIKKGYDPRKDRNSKIYQRIDFRVPVSLRSYCNSNASNELCY 402

Query: 279 GHAEITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS 318
           GHA I+AFQVFP KFQTSLQLFEL+DEYIQEEIRKPSEE  CS
Sbjct: 417 GHAGISAFQVFPRKFQTSLQLFELQDEYIQEEIRKPSEEALCS 402

[Close]
BLAST of Spg034894 vs. ExPASy TrEMBL
Match: A0A6J1EPX9 (general transcription factor 3C polypeptide 5-like OS=Cucurbita moschata OX=3662 GN=LOC111434581 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 6.1e-87
Identity = 174/279 (62.37%), Postives = 185/279 (66.31%), Query Frame = 0 

Query: 39  KETPSILAKLKTPAMFVQKKKSETVHIPCEVDVEPVLAIDFNIKDILARPFRDYREMIQE 98
           K+ P  L  LKTP+MF  +KK ET H PCEVD+EPVLAIDFNIKD               
Sbjct: 178 KDVPESLV-LKTPSMFTPRKKQETPHTPCEVDIEPVLAIDFNIKD--------------- 237

Query: 99  FLLHLPFRDKGSFLWLAGVALSWTGNPSFKGGSFLNLEGNLFFLNYFWHFLLLLDLTFLH 158
                                                                       
Sbjct: 238 ------------------------------------------------------------ 297

Query: 159 IPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLS 218
           IPKTVIWEKY+PQGS+EWD+QVAVS LFEERPIWPKESLVERML MGLVFRHG FRRLLS
Sbjct: 298 IPKTVIWEKYVPQGSEEWDYQVAVSNLFEERPIWPKESLVERMLKMGLVFRHGVFRRLLS 357

Query: 219 RIAYYFSSGPFQRFWIKKGYDPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNKLSNGHAE 278
           RIAYYFSSGPFQRFWIKKGYDPRKDCDSR YQRIDFRVP SLRSYCNSNASN++S  H +
Sbjct: 358 RIAYYFSSGPFQRFWIKKGYDPRKDCDSRKYQRIDFRVPQSLRSYCNSNASNEMSYAHEK 380

Query: 279 ITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS 318
           I AFQVFPHKFQTSLQLFELEDEYIQEEI+KPSEETSCS
Sbjct: 418 ICAFQVFPHKFQTSLQLFELEDEYIQEEIKKPSEETSCS 380

[Close]
BLAST of Spg034894 vs. ExPASy TrEMBL
Match: A0A6J1JKL2 (general transcription factor 3C polypeptide 5-like OS=Cucurbita maxima OX=3661 GN=LOC111486648 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 3.0e-86
Identity = 173/279 (62.01%), Postives = 185/279 (66.31%), Query Frame = 0 

Query: 39  KETPSILAKLKTPAMFVQKKKSETVHIPCEVDVEPVLAIDFNIKDILARPFRDYREMIQE 98
           K+ P  L  LKTP+MF  +KK ET H PCEVD+EPVLAIDFNIKD               
Sbjct: 178 KDVPESLV-LKTPSMFTPRKKQETPHTPCEVDIEPVLAIDFNIKD--------------- 237

Query: 99  FLLHLPFRDKGSFLWLAGVALSWTGNPSFKGGSFLNLEGNLFFLNYFWHFLLLLDLTFLH 158
                                                                       
Sbjct: 238 ------------------------------------------------------------ 297

Query: 159 IPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLS 218
           IPKTVIWEK++PQGS+EWDFQVAVS LFEERPIWPKESLVERML MGLVFRHG FRRLLS
Sbjct: 298 IPKTVIWEKFVPQGSEEWDFQVAVSNLFEERPIWPKESLVERMLKMGLVFRHGVFRRLLS 357

Query: 219 RIAYYFSSGPFQRFWIKKGYDPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNKLSNGHAE 278
           RIAYYFSSGPFQRFWIKKGYDPRKDCDSR YQRIDFRVP SLRSYCNSNAS+++S  H +
Sbjct: 358 RIAYYFSSGPFQRFWIKKGYDPRKDCDSRKYQRIDFRVPQSLRSYCNSNASDEMSYAHEK 380

Query: 279 ITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS 318
           I AFQVFPHKFQTSLQLFELEDEYIQEEI+KPSEETSCS
Sbjct: 418 ICAFQVFPHKFQTSLQLFELEDEYIQEEIKKPSEETSCS 380

[Close]
BLAST of Spg034894 vs. ExPASy TrEMBL
Match: A0A1S4E516 (general transcription factor 3C polypeptide 5-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502764 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 1.0e-81
Identity = 170/283 (60.07%), Postives = 184/283 (65.02%), Query Frame = 0 

Query: 39  KETPSILAKLKTPAMFVQKKKSETVHIP----CEVDVEPVLAIDFNIKDILARPFRDYRE 98
           K+ P  L  LKTP +++ +KKSETV  P    CEVD+EPVLAIDFNIKD           
Sbjct: 178 KDVPENLV-LKTPGIYIPRKKSETVQNPCEVICEVDIEPVLAIDFNIKD----------- 237

Query: 99  MIQEFLLHLPFRDKGSFLWLAGVALSWTGNPSFKGGSFLNLEGNLFFLNYFWHFLLLLDL 158
                                                                       
Sbjct: 238 ------------------------------------------------------------ 297

Query: 159 TFLHIPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFR 218
               IPKTVIWEKY+PQGSDEWDFQVAVSKLFEERPIWPK+SLV+RMLDMGL F HG  R
Sbjct: 298 ----IPKTVIWEKYVPQGSDEWDFQVAVSKLFEERPIWPKDSLVQRMLDMGLAFSHGVLR 357

Query: 219 RLLSRIAYYFSSGPFQRFWIKKGYDPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNKLSN 278
           RLLSRIAYYFSSGPFQRFWIKKGYDPRKD +SRIYQRIDFRVP+SLRSYCNS+AS+KL  
Sbjct: 358 RLLSRIAYYFSSGPFQRFWIKKGYDPRKDRNSRIYQRIDFRVPVSLRSYCNSSASSKLCY 384

Query: 279 GHAEITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS 318
           GHA I AFQVFP KFQTSLQLFEL+DEYIQEEIRKPSEE SCS
Sbjct: 418 GHAGICAFQVFPRKFQTSLQLFELQDEYIQEEIRKPSEEASCS 384

[Close]
BLAST of Spg034894 vs. ExPASy TrEMBL
Match: A0A1S3CMW8 (general transcription factor 3C polypeptide 5-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502764 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 1.0e-81
Identity = 170/283 (60.07%), Postives = 184/283 (65.02%), Query Frame = 0 

Query: 39  KETPSILAKLKTPAMFVQKKKSETVHIP----CEVDVEPVLAIDFNIKDILARPFRDYRE 98
           K+ P  L  LKTP +++ +KKSETV  P    CEVD+EPVLAIDFNIKD           
Sbjct: 171 KDVPENLV-LKTPGIYIPRKKSETVQNPCEVICEVDIEPVLAIDFNIKD----------- 230

Query: 99  MIQEFLLHLPFRDKGSFLWLAGVALSWTGNPSFKGGSFLNLEGNLFFLNYFWHFLLLLDL 158
                                                                       
Sbjct: 231 ------------------------------------------------------------ 290

Query: 159 TFLHIPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFR 218
               IPKTVIWEKY+PQGSDEWDFQVAVSKLFEERPIWPK+SLV+RMLDMGL F HG  R
Sbjct: 291 ----IPKTVIWEKYVPQGSDEWDFQVAVSKLFEERPIWPKDSLVQRMLDMGLAFSHGVLR 350

Query: 219 RLLSRIAYYFSSGPFQRFWIKKGYDPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNKLSN 278
           RLLSRIAYYFSSGPFQRFWIKKGYDPRKD +SRIYQRIDFRVP+SLRSYCNS+AS+KL  
Sbjct: 351 RLLSRIAYYFSSGPFQRFWIKKGYDPRKDRNSRIYQRIDFRVPVSLRSYCNSSASSKLCY 377

Query: 279 GHAEITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS 318
           GHA I AFQVFP KFQTSLQLFEL+DEYIQEEIRKPSEE SCS
Sbjct: 411 GHAGICAFQVFPRKFQTSLQLFELQDEYIQEEIRKPSEEASCS 377

[Close]
BLAST of Spg034894 vs. TAIR 10
Match: AT5G24450.1 (Transcription factor IIIC, subunit 5 )

HSP 1 Score: 209.5 bits (532), Expect = 3.9e-54
Identity = 96/166 (57.83%), Postives = 125/166 (75.30%), Query Frame = 0 

Query: 152 LDLTFLHIPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHG 211
           +D +   IPK + WE YI   S++W +QVAVS LFEERP+W ++S+V+R+LD GL   H 
Sbjct: 220 IDFSVKEIPKILKWEDYIVPTSNQWKWQVAVSALFEERPVWTRDSIVQRLLDKGLTCTHH 279

Query: 212 TFRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNK 271
              R L R AYYFS GPF RFWIK+GYDPRKD +SR++QR++FRVP  L+ YC+SNA+NK
Sbjct: 280 MLNRFLLRAAYYFSGGPFLRFWIKRGYDPRKDPESRVFQRMEFRVPPELKGYCDSNATNK 339

Query: 272 LSNGHAEITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS 318
                 +I AF+VFP K QT LQLFEL+DEYIQ+EIRKP ++T+C+
Sbjct: 340 SKPSWDDICAFKVFPFKCQTFLQLFELDDEYIQQEIRKPPKQTTCN 385

[Close]
BLAST of Spg034894 vs. TAIR 10
Match: AT3G49410.1 (Transcription factor IIIC, subunit 5 )

HSP 1 Score: 206.8 bits (525), Expect = 2.5e-53
Identity = 95/166 (57.23%), Postives = 123/166 (74.10%), Query Frame = 0 

Query: 152 LDLTFLHIPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHG 211
           +D +   IPK + WE ++ + S+ W +QVAVS LFEERPIW ++S+V+R+LD GL   H 
Sbjct: 218 IDFSVKEIPKKLKWEDFVSRSSNHWQWQVAVSALFEERPIWTRDSVVQRLLDKGLKCTHH 277

Query: 212 TFRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNK 271
              R L R AYYFSSGPF RFWIK+GYDPR D +SR+YQR++FRVP  LR YC++NA+N 
Sbjct: 278 MLNRFLLRAAYYFSSGPFLRFWIKRGYDPRNDPESRVYQRMEFRVPPELRGYCDANATNN 337

Query: 272 LSNGHAEITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS 318
                 +I AF++FP K QT LQLFEL+DEYIQ EIRKP ++T+CS
Sbjct: 338 SKPSWNDICAFKLFPFKCQTFLQLFELDDEYIQREIRKPPKQTTCS 383

The following BLAST results are available for this feature:
BLAST of Spg034894 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023530657.15.6e-8762.72general transcription factor 3C polypeptide 5-like [Cucurbita pepo subsp. pepo] ... [more]
XP_022927790.11.3e-8662.37general transcription factor 3C polypeptide 5-like [Cucurbita moschata] >XP_0229... [more]
XP_022989615.16.2e-8662.01general transcription factor 3C polypeptide 5-like [Cucurbita maxima] >XP_022989... [more]
XP_008465056.12.1e-8160.07PREDICTED: general transcription factor 3C polypeptide 5-like isoform X1 [Cucumi... [more]
XP_004142476.12.1e-8159.72general transcription factor 3C polypeptide 5 isoform X2 [Cucumis sativus] >KAE8... [more]
BLAST of Spg034894 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9Y5Q82.2e-0938.46General transcription factor 3C polypeptide 5 OS=Homo sapiens OX=9606 GN=GTF3C5 ... [more]
Q8R2T82.9e-0931.96General transcription factor 3C polypeptide 5 OS=Mus musculus OX=10090 GN=Gtf3c5... [more]
Q54GS88.4e-0934.78General transcription factor 3C polypeptide 5 OS=Dictyostelium discoideum OX=446... [more]
O142292.3e-0635.44Transcription factor tau subunit sfc1 OS=Schizosaccharomyces pombe (strain 972 /... [more]
BLAST of Spg034894 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KV916.3e-9265.72Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G630700 PE=4 SV=1[more]
A0A6J1EPX96.1e-8762.37general transcription factor 3C polypeptide 5-like OS=Cucurbita moschata OX=3662... [more]
A0A6J1JKL23.0e-8662.01general transcription factor 3C polypeptide 5-like OS=Cucurbita maxima OX=3661 G... [more]
A0A1S4E5161.0e-8160.07general transcription factor 3C polypeptide 5-like isoform X1 OS=Cucumis melo OX... [more]
A0A1S3CMW81.0e-8160.07general transcription factor 3C polypeptide 5-like isoform X2 OS=Cucumis melo OX... [more]
BLAST of Spg034894 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G24450.13.9e-5457.83Transcription factor IIIC, subunit 5 [more]
AT3G49410.12.5e-5357.23Transcription factor IIIC, subunit 5 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019136Transcription factor IIIC subunit 5, HTH domainPFAMPF09734Tau95coord: 163..255
e-value: 6.1E-26
score: 91.9
IPR040454Transcription factor IIIC subunit Tfc1/Sfc1PANTHERPTHR13230GENERAL TRANSCRIPTION FACTOR IIIC, POLYPEPTIDE 5coord: 159..317

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg034894.1Spg034894.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0006384 transcription initiation from RNA polymerase III promoter
cellular_component GO:0000127 transcription factor TFIIIC complex
molecular_function GO:0003676 nucleic acid binding