Spg034840 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg034840
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotransposon gag protein
Locationscaffold3: 25051602 .. 25054012 (+)
RNA-Seq ExpressionSpg034840
SyntenySpg034840
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGAATTCTTCTCCAAAACTTTCCACAAAAAGGAAAAAGAAAACTTTGGAACTTCCTATTGCATCGACGTAGAAGAAGTTGACAATTCCAAGAAGGGTGAACAAAGGACTTCTGTCTTCGATCGCATCAAGCCTCCAACTACTCATCCTTCAGTATTCGAAAGAATGAGTATGGTCGCGACAGAAGAAGAAAATCAATGTTTGGTGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCAAAGAAAAGTCGACCTTCAACATCTGTTTTTTATCGCCTCAAAGTAACAAGTGATCAACCTAAAAGAAAGATGGGCAACATGGAGGTGAAACTTTTCGATGAAGTAAACAGCAACAAGAAGCTTCATAGTAGCATCCCGTCACGTATGAAGAGGAGGTTCTCTGTTCTCATAAATACAGAAGGTTCCTTGACGGTGAAGCCAAATCTCATTATCTTGACCAATCCTATAAATGAAGGATCTGATCAAGACCATGATAAAGATGAGAGCTTTTAAAATGTAAAAGCTCTTGATCGCAAGAGCCTAAACTGCATGATGCTCCTAGCCCACATGAGCTTAAAAGGTGGTAAAAAAAACCCAAAATGAACTATGTTATGACTTGATCCCTTTTCCTCAAGGGTACGTAGGCAGCTTAAAGAAAACTTTAAGTTCAATCTCTGCAAAAAAAAAAAAAAAAAGTGCAACAAATATTGAAGCACGATAAGACAAATTGAAGAAACTCATCACTACTGGAGGCAATACAACAAAATGAAGTTGTGCACCGTTATGAATGTGAAGCTACGAGTTGGATGAATAAAAGAAGACTTCATTTCTCCAAATTCATTGTCTTTCTAGCCTCAAGTTTGGTGTTTCACTCACCCTAAGTTTGTTGTCCCCTCTTCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCTCTCCAAGTTCGAAGGTTCTCATGCGCTTGGCAGCAGTTCCTTCTCTCCAAGTTCGAGGGTGTTTACGTTGTACGCTACTGCGTTGTTCCTTCTCCAAGTTTGAAGGTTCTTTGATGCACGCTCCTGCGTTGCTCCTTCTCCAAGTTCGAAGGTTCTCGGGTTGCGTTGTTGCGCTACGTCCTTCTTTAAGTTTGAAGGTTCTCACGTTGCGCTGCTGCGCTGCTTCCTTCTCCAAGTTCGAGGGTTATTACGTTGTACGCTAATGCGTTGTTCCTTCTCCGAGTTTGAAGGTTCTCAGCTGAATGCTCCTGCGTTGCTCCTTCTCCAGGTCCGAAGGTTTGCACATGTTGTTATGCTGCTTCGCTGCTGTTCCTTCTCCAAGTGCGAAGGTTCTCAGGTTGTGCTGCTACGCTACTTCCTTCTTTAAGTTCAAAGGTTCTCACGTCGCGCTGTTGTGCTCCTTCCTTCTCCAAGTTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCTCTCCAAGTTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCTCTCAGAGTTTGAAGGTTCTCATGTTGTTTCGCTACAGTTCCTTCTCTCCAAGTTTGAAGGTTCTCACATTGCTGCACTACAGTTTCTTCTCTCCAAGTTCGAAGATTCTCACGCATTTCGCTGCAGTTCCTTCTCTCCAAGTTTGAAGGTTCACGCACTTCGCTACAGTTCCTTCTCTCAAGTTTGAAGGTTCTCACGCTGCTTCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCTCTCCAAGTTCGAAGGTTCCCAAGCGGGTTCTCAAGCCGCTTCACTGTAGTTCCTTCTCTAAGTCGCTACTTCATCGTTGTTCCTTCTTTAAGTTTGAAACTTTCCTCCAAGTCCGAAGGTTTGCACGTGTCGTTACGTTGCTTTGCTGCGGTTCCTTCTCTCCAAGTTTGAAGGTTCTCACACTGCTTCGTTGTTGTTCCTTCTTCAAGTTTGAAACTTCTCTCCAAGTTTGAAGGTTCTCGTGTTGCTTGCTGCAGTTCCTTCTCTCAAAGTTCAAAGGTTCTCACGATGCTTCTTAGAAGGTTCTTATGTTGCATGATGTTGTGTTGACCCTTCTCCAAATTCGAAGATTCTCATGCCACGCTGCTTTGTTGTTCCTTCTCCAAGTTCGAAGGTTCTCATACTGTGCTGCTGCGCTGCTTCCTTCTCCAAGTTCGAAGGTTCTCAAGTGTTACGCTGTTTCGCTGATGCTTCCTTCTCCAAGTTCGAAGAACCCGTTGTATGCTGCTTCGCTACTTCCTTCTCTATGTTCGAAGGTTCTCATGCTACGCTGCTTTGTTGTTCCTTCTCCAAGTTTGAAGGTTCTGCTTTATTGTAGACGTTGCAGCAGTAAAGGAGTCCAAGTGTGA

mRNA sequence

ATGAATGAATTCTTCTCCAAAACTTTCCACAAAAAGGAAAAAGAAAACTTTGGAACTTCCTATTGCATCGACGTAGAAGAAGTTGACAATTCCAAGAAGGGTGAACAAAGGACTTCTGTCTTCGATCGCATCAAGCCTCCAACTACTCATCCTTCAGTATTCGAAAGAATGAGTATGGTCGCGACAGAAGAAGAAAATCAATGTTTGGTGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCAAAGAAAAGTCGACCTTCAACATCTGTTTTTTATCGCCTCAAAGTAACAAGTGATCAACCTAAAAGAAAGATGGGCAACATGGAGGTGAAACTTTTCGATGAAGTAAACAGCAACAAGAAGCTTCATAGTAGCATCCCGTCACGTATGAAGAGGAGGTTCTCTGTTCTCATAAATACAGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCTCTCCAAGTTCGAAGGTTCTCATGCGCTTGGCAGCAGTTCCTTCTCTCCAAGTTCGAGGGTGTTTACGTTGTACGCTACTGCGTTGTTCCTTCTCCAAGTTTGAAGGTTCTTTGATGCACGCTCCTGCGTTGCTCCTTCTCCAAGTTCGAAGGTTCTCGGGTTGCGTTGTTGCGCTACGTCCTTCTTTAAGTTTGAAGGTTCTCACGTTGCGCTGCTGCGCTGCTTCCTTCTCCAAGTCCGAAGGTTTGCACATGTTGTTATGCTGCTTCGCTGCTGTTCCTTCTCCAAGTGCGAAGGTTCTCAGGTTGTGCTGCTACGCTACTTCCTTCTTTAAGTTCAAAGGTTCTCACGTCGCGCTGTTGTGCTCCTTCCTTCTCCAAGTTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCTCTCCAAGTTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCTCTCAGAGTTTGAAGGTTCTCATGTTGTTTCGCTACAGTTCCTTCTCTCCAAGTTTGAAGGTTCTCACATTGCTGCACTACATTCCTTCTCTCAAGTTTGAAGGTTCTCACGCTGCTTCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCTCTCCAAGTTCGAAGGTTCCCAAGCGGGTTCTCAAGCCGCTTCACTGTAGTTCCTTCTCTAAGTCGCTACTTCATCGTTGTTCCTTCTTTAAGTTTGAAACTTTCCTCCAAGTCCGAAGGTTTGCACGTGTCGTTACGTTGCTTTGCTGCGGTTCCTTCTCTCCAAGTTTGAAGGTTCTTATGTTGCATGATGTTGTGTTGACCCTTCTCCAAATTCGAAGATTCTCATGCCACGCTGCTTTGTTGTTCCTTCTCCAAGTTCGAAGGTTCTCATACTGTGCTGCTGCGCTGCTTCCTTCTCCAAGTTCGAAGGTTCTCAAGTGTTACGCTGTTTCGCTGATGCTTCCTTCTCCAAGTTCGAAGAACCCGTTGTATGCTGCTTCGCTACTTCCTTCTCTATGTTCGAAGGTTCTCATGCTACGCTGCTTTGTTGTTCCTTCTCCAAGTTTGAAGGTTCTGCTTTATTGTAGACGTTGCAGCAGTAAAGGAGTCCAAGTGTGA

Coding sequence (CDS)

ATGAATGAATTCTTCTCCAAAACTTTCCACAAAAAGGAAAAAGAAAACTTTGGAACTTCCTATTGCATCGACGTAGAAGAAGTTGACAATTCCAAGAAGGGTGAACAAAGGACTTCTGTCTTCGATCGCATCAAGCCTCCAACTACTCATCCTTCAGTATTCGAAAGAATGAGTATGGTCGCGACAGAAGAAGAAAATCAATGTTTGGTGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCAAAGAAAAGTCGACCTTCAACATCTGTTTTTTATCGCCTCAAAGTAACAAGTGATCAACCTAAAAGAAAGATGGGCAACATGGAGGTGAAACTTTTCGATGAAGTAAACAGCAACAAGAAGCTTCATAGTAGCATCCCGTCACGTATGAAGAGGAGGTTCTCTGTTCTCATAAATACAGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCTCTCCAAGTTCGAAGGTTCTCATGCGCTTGGCAGCAGTTCCTTCTCTCCAAGTTCGAGGGTGTTTACGTTGTACGCTACTGCGTTGTTCCTTCTCCAAGTTTGAAGGTTCTTTGATGCACGCTCCTGCGTTGCTCCTTCTCCAAGTTCGAAGGTTCTCGGGTTGCGTTGTTGCGCTACGTCCTTCTTTAAGTTTGAAGGTTCTCACGTTGCGCTGCTGCGCTGCTTCCTTCTCCAAGTCCGAAGGTTTGCACATGTTGTTATGCTGCTTCGCTGCTGTTCCTTCTCCAAGTGCGAAGGTTCTCAGGTTGTGCTGCTACGCTACTTCCTTCTTTAAGTTCAAAGGTTCTCACGTCGCGCTGTTGTGCTCCTTCCTTCTCCAAGTTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCTCTCCAAGTTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCTCTCAGAGTTTGAAGGTTCTCATGTTGTTTCGCTACAGTTCCTTCTCTCCAAGTTTGAAGGTTCTCACATTGCTGCACTACATTCCTTCTCTCAAGTTTGAAGGTTCTCACGCTGCTTCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCTCTCCAAGTTCGAAGGTTCCCAAGCGGGTTCTCAAGCCGCTTCACTGTAGTTCCTTCTCTAAGTCGCTACTTCATCGTTGTTCCTTCTTTAAGTTTGAAACTTTCCTCCAAGTCCGAAGGTTTGCACGTGTCGTTACGTTGCTTTGCTGCGGTTCCTTCTCTCCAAGTTTGAAGGTTCTTATGTTGCATGATGTTGTGTTGACCCTTCTCCAAATTCGAAGATTCTCATGCCACGCTGCTTTGTTGTTCCTTCTCCAAGTTCGAAGGTTCTCATACTGTGCTGCTGCGCTGCTTCCTTCTCCAAGTTCGAAGGTTCTCAAGTGTTACGCTGTTTCGCTGATGCTTCCTTCTCCAAGTTCGAAGAACCCGTTGTATGCTGCTTCGCTACTTCCTTCTCTATGTTCGAAGGTTCTCATGCTACGCTGCTTTGTTGTTCCTTCTCCAAGTTTGAAGGTTCTGCTTTATTGTAGACGTTGCAGCAGTAAAGGAGTCCAAGTGTGA

Protein sequence

MNEFFSKTFHKKEKENFGTSYCIDVEEVDNSKKGEQRTSVFDRIKPPTTHPSVFERMSMVATEEENQCLVSTSTRPSAFQRLSVSTSKKSRPSTSVFYRLKVTSDQPKRKMGNMEVKLFDEVNSNKKLHSSIPSRMKRRFSVLINTEGSHALRCSSFSPSSKVLMRLAAVPSLQVRGCLRCTLLRCSFSKFEGSLMHAPALLLLQVRRFSGCVVALRPSLSLKVLTLRCCAASFSKSEGLHMLLCCFAAVPSPSAKVLRLCCYATSFFKFKGSHVALLCSFLLQVRRFSRASLQFLLSKFEGSHALRCSSFSQSLKVLMLFRYSSFSPSLKVLTLLHYIPSLKFEGSHAASLQFFLPKFEGSHALRCSSFSPSSKVPKRVLKPLHCSSFSKSLLHRCSFFKFETFLQVRRFARVVTLLCCGSFSPSLKVLMLHDVVLTLLQIRRFSCHAALLFLLQVRRFSYCAAALLPSPSSKVLKCYAVSLMLPSPSSKNPLYAASLLPSLCSKVLMLRCFVVPSPSLKVLLYCRRCSSKGVQV
Homology
[Close]
BLAST of Spg034840 vs. NCBI nr
Match: KAA0044978.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 147.5 bits (371), Expect = 3.3e-31
Identity = 87/160 (54.37%), Postives = 109/160 (68.12%), Query Frame = 0 

Query: 3   EFFSKTF---HKKEKENFGTSYCIDV----------EEVDNSKKGEQRTSVFDRIKPPTT 62
           EFF ++F   H +E     T +   +          EEVDNS + +QRTSVFDRIKP TT
Sbjct: 84  EFFPRSFLEDHPEEILEVTTCHTTSIVKVDNNYDSYEEVDNSNEIKQRTSVFDRIKPLTT 143

Query: 63  HPSVFERMSMVATEEENQCLVSTSTRPSAFQRLSVSTSKKSRPSTSVFYRLKVTSDQPKR 122
             SVF+R+SM   EEENQC  ST  R SAF+RLS+STSKK RPSTS F RLK+T+DQ +R
Sbjct: 144 RSSVFQRLSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQR 203

Query: 123 KMGNMEVKLFDEVNSNKKLHSSIPSRMKRRFSVLINTEGS 150
           +M +++ K F E N + K+HS +PSRMKR+ SV INTEGS
Sbjct: 204 EMKSLKAKPFHEENDDDKIHSRVPSRMKRKLSVDINTEGS 243

[Close]
BLAST of Spg034840 vs. NCBI nr
Match: KAA0040811.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 146.4 bits (368), Expect = 7.3e-31
Identity = 79/124 (63.71%), Postives = 97/124 (78.23%), Query Frame = 0 

Query: 26  EEVDNSKKGEQRTSVFDRIKPPTTHPSVFERMSMVATEEENQCLVSTSTRPSAFQRLSVS 85
           EEVDNS + +QRTSVFDRIKP TT  SVF+R+S+   EEENQC  ST TR SAF+ LS+S
Sbjct: 463 EEVDNSNEIKQRTSVFDRIKPLTTRSSVFQRLSITTKEEENQCPTSTCTRTSAFKSLSIS 522

Query: 86  TSKKSRPSTSVFYRLKVTSDQPKRKMGNMEVKLFDEVNSNKKLHSSIPSRMKRRFSVLIN 145
           TSKK RPSTS F RLK+ +DQ +R+M +++VK F E N + K+HS +PSRMKR+ SV IN
Sbjct: 523 TSKKDRPSTSAFDRLKMINDQQQREMKSLKVKPFHEENDDDKIHSRVPSRMKRKLSVDIN 582

Query: 146 TEGS 150
           TEGS
Sbjct: 583 TEGS 586

[Close]
BLAST of Spg034840 vs. NCBI nr
Match: TYK08944.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 145.6 bits (366), Expect = 1.2e-30
Identity = 78/124 (62.90%), Postives = 97/124 (78.23%), Query Frame = 0 

Query: 26  EEVDNSKKGEQRTSVFDRIKPPTTHPSVFERMSMVATEEENQCLVSTSTRPSAFQRLSVS 85
           EEVDNS + +QRTSVFDRIKP TT  SVF+R+SM   EE+NQC  ST  R SAF+RLS+S
Sbjct: 537 EEVDNSNEIKQRTSVFDRIKPLTTRSSVFQRLSMATKEEKNQCPTSTYARTSAFKRLSIS 596

Query: 86  TSKKSRPSTSVFYRLKVTSDQPKRKMGNMEVKLFDEVNSNKKLHSSIPSRMKRRFSVLIN 145
           TSKK RPSTS F RLK+T+DQ +R+M +++ K F E N + K+H+ +PSRMKR+ SV IN
Sbjct: 597 TSKKHRPSTSTFDRLKMTNDQQQREMKSLKAKPFHEENDDDKIHNRVPSRMKRKLSVDIN 656

Query: 146 TEGS 150
           TEGS
Sbjct: 657 TEGS 660

[Close]
BLAST of Spg034840 vs. NCBI nr
Match: KAA0036008.1 (Retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 145.6 bits (366), Expect = 1.2e-30
Identity = 79/124 (63.71%), Postives = 96/124 (77.42%), Query Frame = 0 

Query: 26  EEVDNSKKGEQRTSVFDRIKPPTTHPSVFERMSMVATEEENQCLVSTSTRPSAFQRLSVS 85
           EEVDNS + +QRTSVFDRIKP TT   VF+R+SM   EEENQC +ST  R SAF+RLS+S
Sbjct: 61  EEVDNSNEIKQRTSVFDRIKPLTTRSLVFQRLSMATKEEENQCPMSTYARTSAFKRLSIS 120

Query: 86  TSKKSRPSTSVFYRLKVTSDQPKRKMGNMEVKLFDEVNSNKKLHSSIPSRMKRRFSVLIN 145
           TSKK RPSTS F RLK+T+DQ +R+M + + K F E N + K+HS +PSRMKR+ SV IN
Sbjct: 121 TSKKHRPSTSAFDRLKMTNDQQQREMKSFKAKPFHEENDDDKIHSRVPSRMKRKLSVDIN 180

Query: 146 TEGS 150
           TEGS
Sbjct: 181 TEGS 184

[Close]
BLAST of Spg034840 vs. NCBI nr
Match: KAA0055462.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 145.6 bits (366), Expect = 1.2e-30
Identity = 78/124 (62.90%), Postives = 97/124 (78.23%), Query Frame = 0 

Query: 26  EEVDNSKKGEQRTSVFDRIKPPTTHPSVFERMSMVATEEENQCLVSTSTRPSAFQRLSVS 85
           EEVDNS + +QRTSVFDRIKP TT  SVF+R+SM   EE+NQC  ST  R SAF+RLS+S
Sbjct: 537 EEVDNSNEIKQRTSVFDRIKPLTTRSSVFQRLSMATKEEKNQCPTSTYARTSAFKRLSIS 596

Query: 86  TSKKSRPSTSVFYRLKVTSDQPKRKMGNMEVKLFDEVNSNKKLHSSIPSRMKRRFSVLIN 145
           TSKK RPSTS F RLK+T+DQ +R+M +++ K F E N + K+H+ +PSRMKR+ SV IN
Sbjct: 597 TSKKHRPSTSTFDRLKMTNDQQQREMKSLKAKPFHEENDDDKIHNRVPSRMKRKLSVDIN 656

Query: 146 TEGS 150
           TEGS
Sbjct: 657 TEGS 660

[Close]
BLAST of Spg034840 vs. ExPASy TrEMBL
Match: A0A5A7TQ06 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002860 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.6e-31
Identity = 87/160 (54.37%), Postives = 109/160 (68.12%), Query Frame = 0 

Query: 3   EFFSKTF---HKKEKENFGTSYCIDV----------EEVDNSKKGEQRTSVFDRIKPPTT 62
           EFF ++F   H +E     T +   +          EEVDNS + +QRTSVFDRIKP TT
Sbjct: 84  EFFPRSFLEDHPEEILEVTTCHTTSIVKVDNNYDSYEEVDNSNEIKQRTSVFDRIKPLTT 143

Query: 63  HPSVFERMSMVATEEENQCLVSTSTRPSAFQRLSVSTSKKSRPSTSVFYRLKVTSDQPKR 122
             SVF+R+SM   EEENQC  ST  R SAF+RLS+STSKK RPSTS F RLK+T+DQ +R
Sbjct: 144 RSSVFQRLSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQR 203

Query: 123 KMGNMEVKLFDEVNSNKKLHSSIPSRMKRRFSVLINTEGS 150
           +M +++ K F E N + K+HS +PSRMKR+ SV INTEGS
Sbjct: 204 EMKSLKAKPFHEENDDDKIHSRVPSRMKRKLSVDINTEGS 243

[Close]
BLAST of Spg034840 vs. ExPASy TrEMBL
Match: A0A5A7TGM1 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold333G00260 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.5e-31
Identity = 79/124 (63.71%), Postives = 97/124 (78.23%), Query Frame = 0 

Query: 26  EEVDNSKKGEQRTSVFDRIKPPTTHPSVFERMSMVATEEENQCLVSTSTRPSAFQRLSVS 85
           EEVDNS + +QRTSVFDRIKP TT  SVF+R+S+   EEENQC  ST TR SAF+ LS+S
Sbjct: 463 EEVDNSNEIKQRTSVFDRIKPLTTRSSVFQRLSITTKEEENQCPTSTCTRTSAFKSLSIS 522

Query: 86  TSKKSRPSTSVFYRLKVTSDQPKRKMGNMEVKLFDEVNSNKKLHSSIPSRMKRRFSVLIN 145
           TSKK RPSTS F RLK+ +DQ +R+M +++VK F E N + K+HS +PSRMKR+ SV IN
Sbjct: 523 TSKKDRPSTSAFDRLKMINDQQQREMKSLKVKPFHEENDDDKIHSRVPSRMKRKLSVDIN 582

Query: 146 TEGS 150
           TEGS
Sbjct: 583 TEGS 586

[Close]
BLAST of Spg034840 vs. ExPASy TrEMBL
Match: A0A5D3BBF9 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold726G00250 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 6.0e-31
Identity = 78/124 (62.90%), Postives = 96/124 (77.42%), Query Frame = 0 

Query: 26  EEVDNSKKGEQRTSVFDRIKPPTTHPSVFERMSMVATEEENQCLVSTSTRPSAFQRLSVS 85
           EEVDNS + +QRTS+FDRIKP TT   VF+R+SM   EEENQC  ST  R SAF+RLS+S
Sbjct: 61  EEVDNSNEIKQRTSIFDRIKPLTTRSLVFQRLSMATKEEENQCPTSTYARTSAFKRLSIS 120

Query: 86  TSKKSRPSTSVFYRLKVTSDQPKRKMGNMEVKLFDEVNSNKKLHSSIPSRMKRRFSVLIN 145
           TSKK RPSTS F RLK+T+DQ +R+M +++ K F E N + K+HS +PSRMKR+ SV IN
Sbjct: 121 TSKKHRPSTSAFDRLKMTNDQQQREMKSLKAKPFHEENGDDKIHSRVPSRMKRKLSVDIN 180

Query: 146 TEGS 150
           TEGS
Sbjct: 181 TEGS 184

[Close]
BLAST of Spg034840 vs. ExPASy TrEMBL
Match: A0A5A7UI09 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold221G00340 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 6.0e-31
Identity = 78/124 (62.90%), Postives = 97/124 (78.23%), Query Frame = 0 

Query: 26  EEVDNSKKGEQRTSVFDRIKPPTTHPSVFERMSMVATEEENQCLVSTSTRPSAFQRLSVS 85
           EEVDNS + +QRTSVFDRIKP TT  SVF+R+SM   EE+NQC  ST  R SAF+RLS+S
Sbjct: 537 EEVDNSNEIKQRTSVFDRIKPLTTRSSVFQRLSMATKEEKNQCPTSTYARTSAFKRLSIS 596

Query: 86  TSKKSRPSTSVFYRLKVTSDQPKRKMGNMEVKLFDEVNSNKKLHSSIPSRMKRRFSVLIN 145
           TSKK RPSTS F RLK+T+DQ +R+M +++ K F E N + K+H+ +PSRMKR+ SV IN
Sbjct: 597 TSKKHRPSTSTFDRLKMTNDQQQREMKSLKAKPFHEENDDDKIHNRVPSRMKRKLSVDIN 656

Query: 146 TEGS 150
           TEGS
Sbjct: 657 TEGS 660

[Close]
BLAST of Spg034840 vs. ExPASy TrEMBL
Match: A0A5D3CCI8 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold314G00350 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 6.0e-31
Identity = 78/124 (62.90%), Postives = 97/124 (78.23%), Query Frame = 0 

Query: 26  EEVDNSKKGEQRTSVFDRIKPPTTHPSVFERMSMVATEEENQCLVSTSTRPSAFQRLSVS 85
           EEVDNS + +QRTSVFDRIKP TT  SVF+R+SM   EE+NQC  ST  R SAF+RLS+S
Sbjct: 537 EEVDNSNEIKQRTSVFDRIKPLTTRSSVFQRLSMATKEEKNQCPTSTYARTSAFKRLSIS 596

Query: 86  TSKKSRPSTSVFYRLKVTSDQPKRKMGNMEVKLFDEVNSNKKLHSSIPSRMKRRFSVLIN 145
           TSKK RPSTS F RLK+T+DQ +R+M +++ K F E N + K+H+ +PSRMKR+ SV IN
Sbjct: 597 TSKKHRPSTSTFDRLKMTNDQQQREMKSLKAKPFHEENDDDKIHNRVPSRMKRKLSVDIN 656

Query: 146 TEGS 150
           TEGS
Sbjct: 657 TEGS 660

The following BLAST results are available for this feature:
BLAST of Spg034840 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0044978.13.3e-3154.38retrotransposon gag protein [Cucumis melo var. makuwa][more]
KAA0040811.17.3e-3163.71retrotransposon gag protein [Cucumis melo var. makuwa][more]
TYK08944.11.2e-3062.90retrotransposon gag protein [Cucumis melo var. makuwa][more]
KAA0036008.11.2e-3063.71Retrotransposon gag protein [Cucumis melo var. makuwa][more]
KAA0055462.11.2e-3062.90retrotransposon gag protein [Cucumis melo var. makuwa][more]
BLAST of Spg034840 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg034840 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TQ061.6e-3154.38Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
A0A5A7TGM13.5e-3163.71Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
A0A5D3BBF96.0e-3162.90Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A5A7UI096.0e-3162.90Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
A0A5D3CCI86.0e-3162.90Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
BLAST of Spg034840 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg034840.1Spg034840.1mRNA