Spg034828 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg034828
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUlp1-like peptidase
Locationscaffold3: 27177035 .. 27177948 (+)
RNA-Seq ExpressionSpg034828
SyntenySpg034828
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCTCTCTCCCATCGGCGATTCTCATTCTCCCTCTTCAACCGTCGACGTTCCGAACGCTTCTTCTCCGCCTTCGAATCCAAATGCTGGTTAGTGACATTTTTTTTACTTTGCTTTTGTGGGTTAGTCTTGGTTTACGTTAAATGTTTGTTCATGGGTTTCGTAGGTTTACGTTTTTTTGTTCGTTGCTCTGAATTGTTGGTGTTTTGTTTCCATTTTCCCACTTGCTTTGTAGTTGGGTTCTTAAACATTTCTCATTGCATGTTGTTGCTTCTGTTGTTGGAGTTGGAATTAGTTAGTCATATGACTTTGCTTCTTTCAGGTGGGTTTTCGGTTTAGCAATTTAAGGCTAGGAAAAGTACAGAAGTTGTTTCATGCTGCTTGGTTGTAATGCCATGAACTGAGTGGATTCGTCAGGTAGTTGCAGAGCGAAAACAAGAGCCAGAAAAAAAGGAACACAATCGAGGGCGAGAGCACTGAGAGTAAGAGCGAGATTTTAACAGAGTGTATTAAAATTCATTTTTGTGTTGCATTTTTTTTCCTGATCACGTGTGATATTTACAATAACTGTTGCATACATGTAGAATTCAAATAGCACCTGTTCTCAAGATTGTTGAGGCTGATCGCTTTCCCGCCCAAGTGACTTGCCTGTCTCACATTGGGAATGCCAACGTGAACGTCAAGAACAGGCTCAATGGCAAGCAGATGAACATGTTCAAGAGGACCGTTTTTGGGCGGTTCGTGGACATGGATCTTGTGTTCAACAGTCCACTTATGCATCACATGCTACCTAGGGAGGTTCGATCAGACCGAGCAGATGCCATGAGTTTCAACATCAGGGGGACGGTCATGACCTTCTCCAAGGAGGAGTTCCTATTGATGATGGAATTGTGGAGGAGCCCTACTCCTTGA

mRNA sequence

ATGTCTCTCTCTCCCATCGGCGATTCTCATTCTCCCTCTTCAACCGTCGACGTTCCGAACGCTTCTTCTCCGCCTTCGAATCCAAATGCTGTTGGGTTCTTAAACATTTCTCATTGCATGTTGTTGCTTCTGTTGTTGGAGTTGGAATTAGTTAGTCATATGACTTTGCTTCTTTCAGGTGGAATTCAAATAGCACCTGTTCTCAAGATTGTTGAGGCTGATCGCTTTCCCGCCCAAGTGACTTGCCTGTCTCACATTGGGAATGCCAACGTGAACGTCAAGAACAGGCTCAATGGCAAGCAGATGAACATGTTCAAGAGGACCGTTTTTGGGCGGTTCGTGGACATGGATCTTGTGTTCAACAGTCCACTTATGCATCACATGCTACCTAGGGAGGTTCGATCAGACCGAGCAGATGCCATGAGTTTCAACATCAGGGGGACGGTCATGACCTTCTCCAAGGAGGAGTTCCTATTGATGATGGAATTGTGGAGGAGCCCTACTCCTTGA

Coding sequence (CDS)

ATGTCTCTCTCTCCCATCGGCGATTCTCATTCTCCCTCTTCAACCGTCGACGTTCCGAACGCTTCTTCTCCGCCTTCGAATCCAAATGCTGTTGGGTTCTTAAACATTTCTCATTGCATGTTGTTGCTTCTGTTGTTGGAGTTGGAATTAGTTAGTCATATGACTTTGCTTCTTTCAGGTGGAATTCAAATAGCACCTGTTCTCAAGATTGTTGAGGCTGATCGCTTTCCCGCCCAAGTGACTTGCCTGTCTCACATTGGGAATGCCAACGTGAACGTCAAGAACAGGCTCAATGGCAAGCAGATGAACATGTTCAAGAGGACCGTTTTTGGGCGGTTCGTGGACATGGATCTTGTGTTCAACAGTCCACTTATGCATCACATGCTACCTAGGGAGGTTCGATCAGACCGAGCAGATGCCATGAGTTTCAACATCAGGGGGACGGTCATGACCTTCTCCAAGGAGGAGTTCCTATTGATGATGGAATTGTGGAGGAGCCCTACTCCTTGA

Protein sequence

MSLSPIGDSHSPSSTVDVPNASSPPSNPNAVGFLNISHCMLLLLLLELELVSHMTLLLSGGIQIAPVLKIVEADRFPAQVTCLSHIGNANVNVKNRLNGKQMNMFKRTVFGRFVDMDLVFNSPLMHHMLPREVRSDRADAMSFNIRGTVMTFSKEEFLLMMELWRSPTP
Homology
BLAST of Spg034828 vs. NCBI nr
Match: XP_038880341.1 (uncharacterized protein LOC120071983 [Benincasa hispida])

HSP 1 Score: 135.6 bits (340), Expect = 4.0e-28
Identity = 63/101 (62.38%), Postives = 82/101 (81.19%), Query Frame = 0

Query: 68  LKIVEADRFPAQVTCLSHIGNANVNVKNRLNGKQMNMFKRTVFGRFVDMDLVFNSPLMHH 127
           LKI E DRFP QVTCL+H+ NAN  VK +L  +Q+ MFKRTVFGRF+D++LVFN+PL+HH
Sbjct: 5   LKIREVDRFPGQVTCLAHVANANKIVKQKLTERQLEMFKRTVFGRFLDIELVFNNPLIHH 64

Query: 128 MLPREVRSDRADAMSFNIRGTVMTFSKEEFLLMMELWRSPT 169
           ML REV++   +++SF +RG V+ FSK+EFLL+  LWRSPT
Sbjct: 65  MLLREVKNSGMNSISFFVRGKVVIFSKDEFLLITCLWRSPT 105

BLAST of Spg034828 vs. NCBI nr
Match: XP_038888550.1 (uncharacterized protein LOC120078361 isoform X1 [Benincasa hispida])

HSP 1 Score: 132.5 bits (332), Expect = 3.4e-27
Identity = 62/101 (61.39%), Postives = 81/101 (80.20%), Query Frame = 0

Query: 68  LKIVEADRFPAQVTCLSHIGNANVNVKNRLNGKQMNMFKRTVFGRFVDMDLVFNSPLMHH 127
           LKI E DRFP QVTCL+H+ NAN  VK +L  +Q+ MFKRTVFGRF+D++LVFN+PL+HH
Sbjct: 5   LKIREVDRFPGQVTCLAHVANANKIVKQKLTERQLEMFKRTVFGRFLDIELVFNNPLIHH 64

Query: 128 MLPREVRSDRADAMSFNIRGTVMTFSKEEFLLMMELWRSPT 169
           ML  EV++   D++SF +RG V+TFSK++FLL+  LWRS T
Sbjct: 65  MLLWEVKNSGMDSISFFVRGKVVTFSKDDFLLITGLWRSLT 105

BLAST of Spg034828 vs. NCBI nr
Match: XP_008437500.1 (PREDICTED: uncharacterized protein LOC103482899 isoform X1 [Cucumis melo])

HSP 1 Score: 131.7 bits (330), Expect = 5.8e-27
Identity = 65/102 (63.73%), Postives = 80/102 (78.43%), Query Frame = 0

Query: 68  LKIVEADRFPAQVTCL-SHIGNANVNVKNRLNGKQMNMFKRTVFGRFVDMDLVFNSPLMH 127
           LKI   +RFP Q + + SHIG AN  VK +L  KQ+++FKRTVFGRFVDMDLVF+SPL+H
Sbjct: 88  LKISPNNRFPGQASSMSSHIGTANKIVKEKLTPKQLDLFKRTVFGRFVDMDLVFSSPLVH 147

Query: 128 HMLPREVRSDRADAMSFNIRGTVMTFSKEEFLLMMELWRSPT 169
           H+L REV+ +R DAMSFN+ G + TFSKEEFLL+  LW SPT
Sbjct: 148 HILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPT 189

BLAST of Spg034828 vs. NCBI nr
Match: XP_008437501.1 (PREDICTED: uncharacterized protein LOC103482899 isoform X2 [Cucumis melo])

HSP 1 Score: 131.7 bits (330), Expect = 5.8e-27
Identity = 65/102 (63.73%), Postives = 80/102 (78.43%), Query Frame = 0

Query: 68  LKIVEADRFPAQVTCL-SHIGNANVNVKNRLNGKQMNMFKRTVFGRFVDMDLVFNSPLMH 127
           LKI   +RFP Q + + SHIG AN  VK +L  KQ+++FKRTVFGRFVDMDLVF+SPL+H
Sbjct: 86  LKISPNNRFPGQASSMSSHIGTANKIVKEKLTPKQLDLFKRTVFGRFVDMDLVFSSPLVH 145

Query: 128 HMLPREVRSDRADAMSFNIRGTVMTFSKEEFLLMMELWRSPT 169
           H+L REV+ +R DAMSFN+ G + TFSKEEFLL+  LW SPT
Sbjct: 146 HILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPT 187

BLAST of Spg034828 vs. NCBI nr
Match: KGN49944.1 (hypothetical protein Csa_000148 [Cucumis sativus])

HSP 1 Score: 131.7 bits (330), Expect = 5.8e-27
Identity = 65/102 (63.73%), Postives = 80/102 (78.43%), Query Frame = 0

Query: 68  LKIVEADRFPAQVTCL-SHIGNANVNVKNRLNGKQMNMFKRTVFGRFVDMDLVFNSPLMH 127
           LKI   +RFP Q + + SHIG AN  VK +L  KQ+++FKRTVFGRFVDMDLVF+SPL+H
Sbjct: 5   LKISPNNRFPGQASSMSSHIGTANKIVKEKLTPKQLDLFKRTVFGRFVDMDLVFSSPLVH 64

Query: 128 HMLPREVRSDRADAMSFNIRGTVMTFSKEEFLLMMELWRSPT 169
           H+L REV+ +R DAMSFN+ G + TFSKEEFLL+  LW SPT
Sbjct: 65  HILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPT 106

BLAST of Spg034828 vs. ExPASy TrEMBL
Match: A0A5A7TGU0 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001140 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 2.8e-27
Identity = 65/102 (63.73%), Postives = 80/102 (78.43%), Query Frame = 0

Query: 68  LKIVEADRFPAQVTCL-SHIGNANVNVKNRLNGKQMNMFKRTVFGRFVDMDLVFNSPLMH 127
           LKI   +RFP Q + + SHIG AN  VK +L  KQ+++FKRTVFGRFVDMDLVF+SPL+H
Sbjct: 11  LKISPNNRFPGQASSMSSHIGTANKIVKEKLTPKQLDLFKRTVFGRFVDMDLVFSSPLVH 70

Query: 128 HMLPREVRSDRADAMSFNIRGTVMTFSKEEFLLMMELWRSPT 169
           H+L REV+ +R DAMSFN+ G + TFSKEEFLL+  LW SPT
Sbjct: 71  HILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPT 112

BLAST of Spg034828 vs. ExPASy TrEMBL
Match: A0A0A0KM59 (DUF1985 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G141180 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 2.8e-27
Identity = 65/102 (63.73%), Postives = 80/102 (78.43%), Query Frame = 0

Query: 68  LKIVEADRFPAQVTCL-SHIGNANVNVKNRLNGKQMNMFKRTVFGRFVDMDLVFNSPLMH 127
           LKI   +RFP Q + + SHIG AN  VK +L  KQ+++FKRTVFGRFVDMDLVF+SPL+H
Sbjct: 5   LKISPNNRFPGQASSMSSHIGTANKIVKEKLTPKQLDLFKRTVFGRFVDMDLVFSSPLVH 64

Query: 128 HMLPREVRSDRADAMSFNIRGTVMTFSKEEFLLMMELWRSPT 169
           H+L REV+ +R DAMSFN+ G + TFSKEEFLL+  LW SPT
Sbjct: 65  HILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPT 106

BLAST of Spg034828 vs. ExPASy TrEMBL
Match: A0A1S3ATU8 (uncharacterized protein LOC103482899 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482899 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 2.8e-27
Identity = 65/102 (63.73%), Postives = 80/102 (78.43%), Query Frame = 0

Query: 68  LKIVEADRFPAQVTCL-SHIGNANVNVKNRLNGKQMNMFKRTVFGRFVDMDLVFNSPLMH 127
           LKI   +RFP Q + + SHIG AN  VK +L  KQ+++FKRTVFGRFVDMDLVF+SPL+H
Sbjct: 88  LKISPNNRFPGQASSMSSHIGTANKIVKEKLTPKQLDLFKRTVFGRFVDMDLVFSSPLVH 147

Query: 128 HMLPREVRSDRADAMSFNIRGTVMTFSKEEFLLMMELWRSPT 169
           H+L REV+ +R DAMSFN+ G + TFSKEEFLL+  LW SPT
Sbjct: 148 HILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPT 189

BLAST of Spg034828 vs. ExPASy TrEMBL
Match: A0A1S3AUB0 (uncharacterized protein LOC103482899 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482899 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 2.8e-27
Identity = 65/102 (63.73%), Postives = 80/102 (78.43%), Query Frame = 0

Query: 68  LKIVEADRFPAQVTCL-SHIGNANVNVKNRLNGKQMNMFKRTVFGRFVDMDLVFNSPLMH 127
           LKI   +RFP Q + + SHIG AN  VK +L  KQ+++FKRTVFGRFVDMDLVF+SPL+H
Sbjct: 86  LKISPNNRFPGQASSMSSHIGTANKIVKEKLTPKQLDLFKRTVFGRFVDMDLVFSSPLVH 145

Query: 128 HMLPREVRSDRADAMSFNIRGTVMTFSKEEFLLMMELWRSPT 169
           H+L REV+ +R DAMSFN+ G + TFSKEEFLL+  LW SPT
Sbjct: 146 HILLREVKDERPDAMSFNLNGIIATFSKEEFLLVTGLWPSPT 187

BLAST of Spg034828 vs. ExPASy TrEMBL
Match: A0A6J1DSS5 (uncharacterized protein LOC111023969 OS=Momordica charantia OX=3673 GN=LOC111023969 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.2e-22
Identity = 58/100 (58.00%), Postives = 73/100 (73.00%), Query Frame = 0

Query: 68  LKIVEADRFPAQVTCLSHIGNANVNVKNRLNGKQMNMF-KRTVFGRFVDMDLVFNSPLMH 127
           LK+ EADRFPAQVT LSH+   N  +  +L   Q++MF KRT+FGRFVD+D++F S L+H
Sbjct: 5   LKVSEADRFPAQVTSLSHLSTTNKIINQKLTPTQLDMFRKRTIFGRFVDLDMMFCSALVH 64

Query: 128 HMLPREVRSDRADAMSFNIRGTVMTFSKEEFLLMMELWRS 167
           + L REV   R D M F+I GT++TFSK EFLLM  LWRS
Sbjct: 65  YFLLREVVDTRPDVMRFDILGTIVTFSKAEFLLMTGLWRS 104

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038880341.14.0e-2862.38uncharacterized protein LOC120071983 [Benincasa hispida][more]
XP_038888550.13.4e-2761.39uncharacterized protein LOC120078361 isoform X1 [Benincasa hispida][more]
XP_008437500.15.8e-2763.73PREDICTED: uncharacterized protein LOC103482899 isoform X1 [Cucumis melo][more]
XP_008437501.15.8e-2763.73PREDICTED: uncharacterized protein LOC103482899 isoform X2 [Cucumis melo][more]
KGN49944.15.8e-2763.73hypothetical protein Csa_000148 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TGU02.8e-2763.73Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G... [more]
A0A0A0KM592.8e-2763.73DUF1985 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G141180 PE=... [more]
A0A1S3ATU82.8e-2763.73uncharacterized protein LOC103482899 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3AUB02.8e-2763.73uncharacterized protein LOC103482899 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A6J1DSS51.2e-2258.00uncharacterized protein LOC111023969 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg034828.1Spg034828.1mRNA