Spg034609 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg034609
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Vesicle transport protein SEC20
Location	scaffold4: 14435504 .. 14442963 (+)
RNA-Seq Expression	Spg034609
Synteny	Spg034609

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTATGGATTTTACACTCCGGTGAATTTCGCGTCGGCGTCGAGACGCCAGGGCAGCGTCTTGACGCCATCCCTGATCCGTGCCTACTGTTTTATTTCTCGGTTTATTCTCGTTTCATCTCGGTATGGGGCTTAATTCTTCGGCTCTTGGTGTCATACTTCAGGCCTGCTTCAATACAACTGGGTCTTTTCACCTCCTTGTCGTCCAAGACATCGAGATGGCTCCAAAACTCCGTAATTGGCCCGAATTAACACCAAATTAATGTGATTGGCTCCCGACATTGCCTAAGCTCAAATATCCTATAAATAAGACAAGTAAAGCATAAAACTATTCTAACAAACTTAGATTAGAGGCGATAAAATAAGACTATTTAGGTCCTATCATTGTCCCATGAGTTGGCCCAAGTAGGCCTTCATTCCATTCCACAAGAATGGACGTCAAATTTTCAGTTAAGTAGTCTGATGACTCTTTGTATCCCCTCAGGGAGTTTCTCTTGATTAATGATTTGTTTCTGTCAAAAAAAATAAAAAAAAAGTTTTTACTTTCTTAATTTTCTTAAAATAAAGAAACCAAACCTGATTTGTAACCTAAAAAAAAGTTGGACAAAAACTTGAAATCGATTAAATAATGAATTTCCCAAAAAGAAAATTCACATGACTGCTGATTCACATGACTCGTCGGCGGCACTCAATTCTGTTTTCATTTTCTTTCCTCTGATTTCTCGGCTTTCGAACACCAAATTTCTGTAATCATACTTCAGATCTTGCAATGGACAAGGTTGCAGAGGAGGTGGTTCGGGTCAAAAATGAGTGGAACGACGCTTTCCGTCAGACTCTCGACCGGATTAAGGCAATCGAATCATACGAGAAATAAGTGGGTCGACGGAGAAGAATTCGCTCCCGAGATTGAATGCTCTGGCTCAAGATGGATTGAATCTACTGTCTTCGTTGGAATTCAAGCTCGATCTTCTTGTGCCCCAGTTGCTCTCTGATTCTGAAGTCGAGGCTGCTCAATCGTTGCTTGAATCCTGGAAAAACCAATCCCACAAGTAATCCATCTAACACTTTCTTTTTAAATCCTGTGGTGGAGACTGGAATTTGACTCGAATTGCTTCTTGCTGTTATTCTATGGCGATGAAAGTGATCGGTGATTGTCAGTACTGGTTTTTGCTTTTTTATTTTTTGTATATATTCCAGTTTGCGATCGAGTCTGAGAAATGCTAATGTGCAAGCAAAGGCCAACATGAGAAAAGCTGCTCAGGAGGAGGTGACTAATTCAAACTGGTTATGTACAATTTTCTTAAACAGTTATAGATTAGCTCTAGTTTTGTTACCGTCTACATGTGGTTTTTCTCCATGATTTCCTGGATGTGGAAATTTATTTTAGATTCCATTATTTCTTCAATGCTAAAATTTACTTTATACTCAGAACTTCGGTGAATTTCGTTGTAGAGAGAACGCCTTCTAGGTGGAGGAGAAGAGTCCACTATTCGAAGACGAAATTTACAGTATGTTATCACTACTTAACGTTTTCAGAAGGTCTATCTAATTGTTTCTTGATATAACTTCTGAAACCCTGGTATTAGACCTCATCTCTGTTCTAATGTTGGAAACCATTTTTACTCCTTTTGCAGAACTAAGGCTAGAATGACATCTGCTGCAGAAAGCATCATAGAGAGCCTTCGCCGAACCCGTCAGCTTATGGTTCAGGTCTGCTGCTGTTGTTAAATTTCTCTTCTTTCTTTTATATTTACCTTGATCATTACTGAATTTTGAAGTTCCTTTCTTTTCATGATGTAATATTCTTGAATATCTGATCTGTAGGAGGTGGAAAGAACTGCAAGCACAATTGAGACTTTCGGTACGTTTTTTAAAATTTTAGTAGCATGGCATCTCTCTTCTCCTATTTTGTTCTCCAGTCAGTTAGTCAGTTTTACTTTCTTCAGTGTGTTCAAATATATCTTGATGGTAGAAACTACAAACAAATAAACTTGTACCCTGTAGGAATATGCTGTATTAGTGGTGCCCATGATCTTATCTTTTCTATTTTAGAAGAGAAACAAATTTCATTGATAAATGAAATAGAGGGAGAATAAGCTCCCAAATATGATCATTACAAGAAAGAGTTCCAATTGGAAAGTAAAGAAGATAGACTATAATCTTCAAAAGGATGTTTACATTTTCACCAATAAAAAACATTGAATAAAATCAAATCCCAAAAAGCAGCAACATTTAGAGAGACGTCCTTGAAAATTTTGCGATTACGTTCACACCAAAGATACCAAAAGAAAACTCTATTGATGGCGAGCCAAAGAGTTTTCTTCTTTTCATGAAAGGGACGATCCACAAAAACTGAAGCAATGAGATCAAAAATAGTTCCAGGCAAAACCAAATTCCACCCAAAAGATTCCACCATTATGGACCAATATTGAGATGCAAAGGAACAATGGCCAAAAAGATGAATTGGGCACCCAACACTTGCACAACACATAACACACCATGAGGGAGAGAAAAAAAATGAGGCATTCTTCTTTGGAGTCTATTTGTTGTATTAATACCACCATGACTTAGCTCCCATAAGAAAATTTTAATCTTCTTTGGGTAACGATCCTTCCATATCATTGAGAAGAGATTGTTTTTGGTTGGACCCTTTGAATGGACTAAATCTTCCATCAAAGAATGAACGGTAAATGTATGAGAGGACTCAAGATTCCAATACCAAGAATCTTGAGCATTCTTGAAAATAACGGATGACAGGAGATGTGAGAGACTAGCTCATTCTAGAATTTCCTCCTCTTTGAGATTTAGACAAAGCCCTAAATCCCAAACTTGAGATTTTGAATTCCATATTTAAGCAATCGATTTCAGAGGTTTAGATGATACATGATAAAGTCTAGGATAAGTTGATTTGAGAGATATACAAGCAAACCATGAATCATTCCAAAAAGATGTATGTGTCCCATTACCAAGCCTCCTTTGAATACGACTACCAACAATATCAATGGTGCTACAAATATGTTTCCAAAGAGATTTCGATGATCCAATAGTGATGGGTTTTGGCCACCAACATAAAACATCTATAGAATAATATCTTGCGGTAATTAATTTTCACCAAAGACTCTCTGGTTTATGTAGAAACCTCCATATCCATTTAGCCAATAAAGTAGAATTTCGAGGATGAAAATTTCCAATACCAAGTCCTCCCAAAATATGTGGAAGTTGAGTTGTCTCCCATTTAACATTATGTAATCCTCCATCTCCTGTTGAGCCTTCCCAAAAGAAATCTCGAATGTGTTTATCCAAAATTTTAGCCACCTTTGAAGGTAATTTATCTTAAGCTGACCAATCAAAAAACTTTTCCACACTTGTAGATTTTATTTATTCCCTCAGCTAAGGAATTGGACTAAGGCATAATTTAATGTTTATGAATTTGTGAAAATCTTTGTTTAACATTTAGTATGAGTTCCATCTCATCCAGTGATCTCTACACAGGTCACCTTGATCCTAAGGTAATGATAAAAAAATGATTGCGATCTTTGTTTCCTTGTTGTTTACGGAATTCTTCTAGGACAAGTAAAAGTTATATCTTGGTCTGAATGGGGCATTATGATTCTATAGTCATTTTAATTCGTTTGTTACGTGGACTGGACCATCTGAAATCCACGTTGTATTCTGTTGTTTATCAGTTTGTATAGGCTAGAATTAGTAATGCAAGCACAGTTTAGAAATTGATTGGTATGGATGCTAAACTATGACCATGATGTCTGGAATTCAACGTCTGATAATTAAGAAATGCATTCATTTCTCATAGAGCTGCAAAGGATTCCCCTTTCTTGTCTACCTACAGCTTGGACATTCTTGCAGTATGAGATCGAACTTCTTTTTTTTTTCTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTGATGAAAGCCAGTTTTCATTCAAATAAATGAAGGTACAAAGATAAGAGCATACAGAAACAAAGGGGAATGAGAGGAGCGTAAAACAAAACTACAAAATATTGGCTCACATTGTTAACAAGAATAAAAAAGCGATGGACGAAAGTTCAGTCATAATAACTTAAAGGAAAGAATTGAAATATTCCAAACTCCAACCTCTTTCCAAGACTCCTCAAATACTAAAAGGAATCTTGCTTTCCTTTCAAGCCCAATGAACCAAATAGCAGTAAGGATTATGGCTTGCCAAAGGAGTTGTCCCCTTTCACATAATGGGGACTCAAAAGAACCTCTTCCATTATAGCACAAGGATTGTTGGAGGCTAACAACAACCCCAAAAGTTGGAAATCTATGTAGAGCACAAAAACGGGGGATTTAAAAGATACTCCTCAATCATGGGACATTTTTAAGTCGTCATATTTTCTTATTTTAAACTAGATTTTTTATAATCATATGATAGAGCCCCAGCAGATGATACTGCTTCTCTGAATGATATCAGATATAAGTATGTTTGCGTGTTTTTGAACCATGGTCAACAAGTAGAGCTTACTTTACGTGTGTATTTGGTTTTTACAGAGGAATCAACTGGAGTGTTAAAGAAGGCTGAGAGTGAATATAAGGGGCATCGCTCATTGTTAATGCGAACCAGGAACTTACTTTCCACTATGCAACGGCAAGATGTAATGGACAGGTATATAGATGATTACTGGCCACTTCTCCAAATTAAAATATATATATATATATAGTTAAACTACAAATGAAGTATTTGAACTTTGATGGTTATATCAATTTAGTCCATAATCTATAAAAAGTTTTAATTATGTCCTAAATTTTGAATTTTGGTTCTATATAGTCTCTGTTGATAACATTGTTGACTAAACGTAACACTCCTAGTTTGACAAATGTTGATTTTGTAGAACATGACAGACAAATAGAAGAAAGTGGTTAGACAAAATAGAATGACACAATCTAGAAAACATGATTTGATACATTGCTTCTGAAAGGGTATTGGTGCCACTTTATTTTGTCCAAATATTGTCCAAATGTCTATTTATCTTGGCTATAGTCAACCTTTGTTGAGTAGGCATGTCATGGCATCGTTTAGTCAAAAATCTTAATGGTAAGAACTAATGCAAACTTTGGGAAAGTAAGTGTAAATTTTTAAACTTCATATACTAAATTGACATATTCATCTAAGTTTAAAGACTAAATTTTTAATTGAACCTCTTTTATAATAAAAAAAAAAAATCTAACTATGAGAGGCTATGTGGACAGGATTATAGTGGCAGTCAGATTTTTCTTTTTCTCTCTTGTTCTTCTTTATGTCGTCTCAAAACGTATTGGGCTACTGAAGTTGTAGAGGATGGCCACCCCTGCCATCAAAGCAGGGATGGTCAAACAAGCAAATCAAATTCCTAGAGATATTGAGCATGGTAGGAATCCAGTTCAAGCCAACGACGATTTAATTCACAAAGTTGCAGATCCACAGGAACGGCATGTTTGGGATGAACTTTGAAGTGTAGTATTCATCGGGAAAGTGGATGGACAAATTTCGTATCACCATTGCTAGCCACAGTCTTAAAAGTATACGTTTCGATCATGGTTTCTTGTGCAGTAAAATTTCTGAGTTCAGCCTGTAATTTATTTAAACGGCGTACTACTATGTGGGAAAAACTACCCACAAACAGAGTACATTCAACTACATCGGTACAAGTAAATATTTTTTGCGCAAGAACTTTAAGCCGGTTATTTTCTTCTCCTCTCTGTAGAACTCATTTGAAGCTTAAGTCCTTTGGATTTTTACAGGTAGAAAACTCAACGATATTGACCATTTGCTACTAGTTTGCTCACTCTCTTTAGAATCGTTGGTGTTGCTCTATGATTGAGGAAGGGCTTGAGCTCTGCTTTACGAGATAAGGGCACACTTTGGCATGCATATGCTTGGTTTCTTCATTGTATTATGGGGAATTTAGTTTGAAAGGAATAGTAGGTTCTTTGAAGAGGTGGAGAGATTCAGTGCGGAGGTTTGGGAGGCTGTTAGGTTTAAGGCTTCGGGAGGCTGTTAGGTTTAACGCTTCTTTATGATGGTCTATTCTTCAACCTTTTTGTATTTTTCAAAAAAAAAAAGGACCTTTTGTAATTATGAGCTTGGTATTCTCCTTTTGAATTGGAGTTTGTTTTATAGTTAGGGTTTGGACTCCTTTTAGTGAACTTATGTTTTTGTATGTCCTTGTACAATTTTTTTATTTTGCTCAATGAAAGCTCGTTTCTTATCCAAAAAAAAATTGAAGCATAAATCTACGATTCCCACTAGAAAATTGAGAGTAGTACACATTTTTTCTGCTCATAGATTCTTGAACTAAAACTCAATAGGTTGTAGGATTATTTGATGCAAATAAAAATGAACTCGTTTGTCTGTAGATATACAATAGGGACAAAATAATATACAAATGATGTCAACATGAATATAGCTCAACAGTTAAGGTTTTACCTTTTCTTGAGGTTGGAGGTTTGGGGCCCGTTTGGTAACATTCTCGTTTCTTGTTTCTTGTTTCCAATTTTATTAAGAAATCTAAGCATTTAATAACTATGTATGTTTCTTGTTTCTCATTTTTTAGAAACACTCCCAAAATTTGTGTAGAACTTTTGAGAACAACTAAAACTAGTTTCTCCTTTTTTGTTCTTGTTTCCAATTTTTTCCAAACATAAATAAGATTATAGGTTTATTATTATTGAATGTATAGGTGTTAGGGTCATGAAATTCTATTTTTCTTTATTAAAAATGAAGAAACGGAAACAAGAAACGAGAACGTTACCAAACGGACCCTTGAATTCTCACTCCCACATTTTTTTTAAGAAAACTTCATTAAAAAGAACCACTAGAAACATTAAAGTCCTTCGATAAAACGAACATCAACCAATCGGGTATATCAGAATATCATAAGTCCCAAAGACTACTGACTCTTCCAAAAGGGAAGATTACCTCTGGTCTACAAAAAAAAACCTGCAATGACACATCTCAGAAGAAGCAGCTTTACGTGCCAATTCATGAACAATTAATTTACGGGATCTTGGGCAGTGCTTGAAGGAGAGCACTCCCACTTTAGGGGACAAGGCGGTTGTGGCCTCCAAAATGTTAACCTTAGAGATGATCGACTCTTCTTCGTTCATGTAATTCATGATCTCCCTTGAGTCTGATTCAACTTCCAGCTTCAATCCCTCACCGAATTTCTCGCATAAATTTCTAAGCCCTATATATCCACATTGCATGAGCTTTGAGAGTTCTAATATCCCATTTCCAATCAATTTTTTGTCGCCCTACACAGATGAGAGATCCACCAGAGTCACGCACAATCCAGCCGATCCTGTCTTGATCTGAGGCTTTGTTCTAAGAGGCAGCAACATTGAGCTTCCAAGTGCTTGGCAGAGGAGGATTCCAAGAGTCGTGACTCAAGTGTTTTTCGTCTCTGATGATATCGACTGGATTCCATAG

mRNA sequence

ATGCTATGGATTTTACACTCCGGTGAATTTCGCGTCGGCGTCGAGACGCCAGGGCAGCGTCTTGACGCCATCCCTGATCCGTGCCTACTGTTTTATTTCTCGGTTTATTCTCGTTTCATCTCGGTATGGGGCTTAATTCTTCGGCTCTTGGTGTCATACTTCAGGCCTGCTTCAATACAACTGGGTCTTTTCACCTCCTTGTCGTCCAAGACATCGAGATGGCTCCAAAACTCCCTCGATCTTCTTGTGCCCCAGTTGCTCTCTGATTCTGAAGTCGAGGCTGCTCAATCGTTGCTTGAATCCTGGAAAAACCAATCCCACAATTTGCGATCGAGTCTGAGAAATGCTAATGTGCAAGCAAAGGCCAACATGAGAAAAGCTGCTCAGGAGGAGAGAGAACGCCTTCTAGGTGGAGGAGAAGAGTCCACTATTCGAAGACGAAATTTACAAACTAAGGCTAGAATGACATCTGCTGCAGAAAGCATCATAGAGAGCCTTCGCCGAACCCGTCAGCTTATGGTTCAGGAGGTGGAAAGAACTGCAAGCACAATTGAGACTTTCGGTCACCTTGATCCTAAGAGCTGCAAAGGATTCCCCTTTCTTGTCTACCTACAGCTTGGACATTCTTGCAAGGAATCAACTGGAGTGTTAAAGAAGGCTGAGAGTGAATATAAGGGGCATCGCTCATTGTTAATGCGAACCAGGAACTTACTTTCCACTATGCAACGGCAAGATGTAATGGACAGGATGGCCACCCCTGCCATCAAAGCAGGGATGGTCAAACAAGCAAATCAAATTCCTAGAGATATTGAGCATGGTAGGAATCCAGTTCAAGCCAACGACGATTTAATTCACAAAGTTGCAGATCCACAGGAACGGCATTGCTTGAAGGAGAGCACTCCCACTTTAGGGGACAAGGCGGTTGTGGCCTCCAAAATGTTAACCTTAGAGATGATCGACTCTTCTTCGTTCATCAACATTGAGCTTCCAAGTGCTTGGCAGAGGAGGATTCCAAGAGTCGTGACTCAAGTGTTTTTCGTCTCTGATGATATCGACTGGATTCCATAG

Coding sequence (CDS)

ATGCTATGGATTTTACACTCCGGTGAATTTCGCGTCGGCGTCGAGACGCCAGGGCAGCGTCTTGACGCCATCCCTGATCCGTGCCTACTGTTTTATTTCTCGGTTTATTCTCGTTTCATCTCGGTATGGGGCTTAATTCTTCGGCTCTTGGTGTCATACTTCAGGCCTGCTTCAATACAACTGGGTCTTTTCACCTCCTTGTCGTCCAAGACATCGAGATGGCTCCAAAACTCCCTCGATCTTCTTGTGCCCCAGTTGCTCTCTGATTCTGAAGTCGAGGCTGCTCAATCGTTGCTTGAATCCTGGAAAAACCAATCCCACAATTTGCGATCGAGTCTGAGAAATGCTAATGTGCAAGCAAAGGCCAACATGAGAAAAGCTGCTCAGGAGGAGAGAGAACGCCTTCTAGGTGGAGGAGAAGAGTCCACTATTCGAAGACGAAATTTACAAACTAAGGCTAGAATGACATCTGCTGCAGAAAGCATCATAGAGAGCCTTCGCCGAACCCGTCAGCTTATGGTTCAGGAGGTGGAAAGAACTGCAAGCACAATTGAGACTTTCGGTCACCTTGATCCTAAGAGCTGCAAAGGATTCCCCTTTCTTGTCTACCTACAGCTTGGACATTCTTGCAAGGAATCAACTGGAGTGTTAAAGAAGGCTGAGAGTGAATATAAGGGGCATCGCTCATTGTTAATGCGAACCAGGAACTTACTTTCCACTATGCAACGGCAAGATGTAATGGACAGGATGGCCACCCCTGCCATCAAAGCAGGGATGGTCAAACAAGCAAATCAAATTCCTAGAGATATTGAGCATGGTAGGAATCCAGTTCAAGCCAACGACGATTTAATTCACAAAGTTGCAGATCCACAGGAACGGCATTGCTTGAAGGAGAGCACTCCCACTTTAGGGGACAAGGCGGTTGTGGCCTCCAAAATGTTAACCTTAGAGATGATCGACTCTTCTTCGTTCATCAACATTGAGCTTCCAAGTGCTTGGCAGAGGAGGATTCCAAGAGTCGTGACTCAAGTGTTTTTCGTCTCTGATGATATCGACTGGATTCCATAG

Protein sequence

MLWILHSGEFRVGVETPGQRLDAIPDPCLLFYFSVYSRFISVWGLILRLLVSYFRPASIQLGLFTSLSSKTSRWLQNSLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANVQAKANMRKAAQEERERLLGGGEESTIRRRNLQTKARMTSAAESIIESLRRTRQLMVQEVERTASTIETFGHLDPKSCKGFPFLVYLQLGHSCKESTGVLKKAESEYKGHRSLLMRTRNLLSTMQRQDVMDRMATPAIKAGMVKQANQIPRDIEHGRNPVQANDDLIHKVADPQERHCLKESTPTLGDKAVVASKMLTLEMIDSSSFINIELPSAWQRRIPRVVTQVFFVSDDIDWIP

Homology

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BLAST of Spg034609 vs. NCBI nr
Match: XP_038875148.1 (uncharacterized protein LOC120067685 isoform X2 [Benincasa hispida])

HSP 1 Score: 298.5 bits (763), Expect = 7.6e-77
Identity = 177/253 (69.96%), Postives = 188/253 (74.31%), Query Frame = 0


Query: 75  LQNSLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANVQAKANMRKAAQEERER 134
           L+ +LDLL PQLLSDSEVEAAQSLL+SWKNQS+NLRSSLRNAN+QAKANMRKAAQEERER
Sbjct: 61  LEFNLDLLAPQLLSDSEVEAAQSLLQSWKNQSNNLRSSLRNANMQAKANMRKAAQEERER 120

Query: 135 LLGGGEESTIRRRNLQTKARMTSAAESIIESLRRTRQLMVQEVERTASTIETFGHLDPKS 194
           LLGGGEESTIRRRNLQTKA MTSAAESI ESLRRTRQLMVQEVERTA+TIETF       
Sbjct: 121 LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTANTIETF------- 180

Query: 195 CKGFPFLVYLQLGHSCKESTGVLKKAESEYKGHRSLLMRTRNLLSTMQRQDVMD------ 254
                           +ESTGVLKKAESEYKGHRSLL RTRNLLSTMQRQDVMD      
Sbjct: 181 ----------------EESTGVLKKAESEYKGHRSLLTRTRNLLSTMQRQDVMDRIILAV 240

Query: 255 -----------------------RMATPAIKAGMVKQANQIPRDIEHGRNPVQANDDLIH 299
                                  RMAT AIKAGM KQAN IP DI+HGRNPVQAN+DLIH
Sbjct: 241 GFFFFSLAVLYVVSKRIGLLKLQRMATAAIKAGMAKQANHIPGDIDHGRNPVQANEDLIH 290

[Close]

BLAST of Spg034609 vs. NCBI nr
Match: XP_023005057.1 (uncharacterized protein LOC111498164 [Cucurbita maxima])

HSP 1 Score: 295.8 bits (756), Expect = 4.9e-76
Identity = 181/253 (71.54%), Postives = 186/253 (73.52%), Query Frame = 0


Query: 75  LQNSLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANVQAKANMRKAAQEERER 134
           L+  LDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNAN+QAKANMRKAAQEERE+
Sbjct: 61  LEFKLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANMQAKANMRKAAQEEREQ 120

Query: 135 LLGGGEESTIRRRNLQTKARMTSAAESIIESLRRTRQLMVQEVERTASTIETFGHLDPKS 194
           LLGGGEESTIRRRNLQTKA MTSAAESI ESLRRTRQLMVQEVERTASTIETF       
Sbjct: 121 LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTASTIETF------- 180

Query: 195 CKGFPFLVYLQLGHSCKESTGVLKKAESEYKGHRSLLMRTRNLLSTMQRQDVMD------ 254
                            ESTGVLKKAESEYKGHRSLL RTRNLLSTMQRQDVMD      
Sbjct: 181 ----------------DESTGVLKKAESEYKGHRSLLTRTRNLLSTMQRQDVMDRIILAV 240

Query: 255 -----------------------RMATPAIKAGMVKQANQIPRDIEHGRNPVQANDDLIH 299
                                  RMAT AIKAGMVKQAN IPRD   GRNPVQAN+DLIH
Sbjct: 241 GFFFFSLAVLYVVSKRIGLLKLQRMATAAIKAGMVKQANHIPRD--GGRNPVQANEDLIH 288

[Close]

BLAST of Spg034609 vs. NCBI nr
Match: XP_022960516.1 (uncharacterized protein LOC111461229 [Cucurbita moschata] >KAG6592931.1 Vesicle transport protein SEC20, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 295.4 bits (755), Expect = 6.4e-76
Identity = 180/253 (71.15%), Postives = 187/253 (73.91%), Query Frame = 0


Query: 75  LQNSLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANVQAKANMRKAAQEERER 134
           L+  LDLL PQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNAN+QAKANMRKAAQEERE+
Sbjct: 61  LEFKLDLLAPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANMQAKANMRKAAQEEREQ 120

Query: 135 LLGGGEESTIRRRNLQTKARMTSAAESIIESLRRTRQLMVQEVERTASTIETFGHLDPKS 194
           LLGGGEESTIRRRNLQTKA MTSAAESI ESLRRTRQLMVQEVERTASTIETF       
Sbjct: 121 LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTASTIETF------- 180

Query: 195 CKGFPFLVYLQLGHSCKESTGVLKKAESEYKGHRSLLMRTRNLLSTMQRQDVMD------ 254
                           +ESTGVLKKAESEYKGHRSLL RTRNLLSTMQRQDVMD      
Sbjct: 181 ----------------EESTGVLKKAESEYKGHRSLLTRTRNLLSTMQRQDVMDRIILAV 240

Query: 255 -----------------------RMATPAIKAGMVKQANQIPRDIEHGRNPVQANDDLIH 299
                                  RMAT AIKAGMVKQANQIPRD   GRNPVQAN+DLIH
Sbjct: 241 GFFFFSLAVLYVVSKRIGLLKLQRMATAAIKAGMVKQANQIPRD--GGRNPVQANEDLIH 288

[Close]

BLAST of Spg034609 vs. NCBI nr
Match: KAG7025339.1 (Vesicle transport protein SEC20 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 294.3 bits (752), Expect = 1.4e-75
Identity = 179/253 (70.75%), Postives = 187/253 (73.91%), Query Frame = 0


Query: 75  LQNSLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANVQAKANMRKAAQEERER 134
           L+  LDLL PQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNAN+QAKANMRKAAQEERE+
Sbjct: 61  LEFKLDLLAPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANMQAKANMRKAAQEEREQ 120

Query: 135 LLGGGEESTIRRRNLQTKARMTSAAESIIESLRRTRQLMVQEVERTASTIETFGHLDPKS 194
           LLGGGEESTIRRRNLQTKA MTSAAESI ESLRRTRQLMVQEVERTASTIETF       
Sbjct: 121 LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTASTIETF------- 180

Query: 195 CKGFPFLVYLQLGHSCKESTGVLKKAESEYKGHRSLLMRTRNLLSTMQRQDVMD------ 254
                           +ESTGVLKKAESEYKGHRSL+ RTRNLLSTMQRQDVMD      
Sbjct: 181 ----------------EESTGVLKKAESEYKGHRSLVTRTRNLLSTMQRQDVMDRIILAV 240

Query: 255 -----------------------RMATPAIKAGMVKQANQIPRDIEHGRNPVQANDDLIH 299
                                  RMAT AIKAGMVKQANQIPRD   GRNPVQAN+DLIH
Sbjct: 241 GFFFFSLAVLYVVSKRIGLLKLQRMATAAIKAGMVKQANQIPRD--GGRNPVQANEDLIH 288

[Close]

BLAST of Spg034609 vs. NCBI nr
Match: XP_022157044.1 (uncharacterized protein LOC111023863 [Momordica charantia] >XP_022157045.1 uncharacterized protein LOC111023863 [Momordica charantia] >XP_022157046.1 uncharacterized protein LOC111023863 [Momordica charantia] >XP_022157047.1 uncharacterized protein LOC111023863 [Momordica charantia])

HSP 1 Score: 293.9 bits (751), Expect = 1.9e-75
Identity = 174/253 (68.77%), Postives = 185/253 (73.12%), Query Frame = 0


Query: 75  LQNSLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANVQAKANMRKAAQEERER 134
           L+  LDLL PQLLSDSEVEAAQSL+ESWKNQSHNLRSSLRNAN+QAKANMRKAAQEERER
Sbjct: 61  LEFKLDLLAPQLLSDSEVEAAQSLIESWKNQSHNLRSSLRNANMQAKANMRKAAQEERER 120

Query: 135 LLGGGEESTIRRRNLQTKARMTSAAESIIESLRRTRQLMVQEVERTASTIETFGHLDPKS 194
           LLGGGEESTIRRRNLQTKA MTSAAESI ESLRRTRQLMVQEVERTA+TIETF       
Sbjct: 121 LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTANTIETF------- 180

Query: 195 CKGFPFLVYLQLGHSCKESTGVLKKAESEYKGHRSLLMRTRNLLSTMQRQDVMD------ 254
                           +ESTGVLKKAE+EYKGHRSLL RTRNLLSTMQRQDVMD      
Sbjct: 181 ----------------EESTGVLKKAETEYKGHRSLLTRTRNLLSTMQRQDVMDRIILAV 240

Query: 255 -----------------------RMATPAIKAGMVKQANQIPRDIEHGRNPVQANDDLIH 299
                                  RMAT AIKAGMVKQA+ IPRDI HGRNP+Q N+DL++
Sbjct: 241 GFFFFSLAVLYVVSKRIGLLKLQRMATAAIKAGMVKQADNIPRDINHGRNPIQGNEDLVY 290

[Close]

BLAST of Spg034609 vs. ExPASy TrEMBL
Match: A0A6J1KS49 (uncharacterized protein LOC111498164 OS=Cucurbita maxima OX=3661 GN=LOC111498164 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 2.4e-76
Identity = 181/253 (71.54%), Postives = 186/253 (73.52%), Query Frame = 0


Query: 75  LQNSLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANVQAKANMRKAAQEERER 134
           L+  LDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNAN+QAKANMRKAAQEERE+
Sbjct: 61  LEFKLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANMQAKANMRKAAQEEREQ 120

Query: 135 LLGGGEESTIRRRNLQTKARMTSAAESIIESLRRTRQLMVQEVERTASTIETFGHLDPKS 194
           LLGGGEESTIRRRNLQTKA MTSAAESI ESLRRTRQLMVQEVERTASTIETF       
Sbjct: 121 LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTASTIETF------- 180

Query: 195 CKGFPFLVYLQLGHSCKESTGVLKKAESEYKGHRSLLMRTRNLLSTMQRQDVMD------ 254
                            ESTGVLKKAESEYKGHRSLL RTRNLLSTMQRQDVMD      
Sbjct: 181 ----------------DESTGVLKKAESEYKGHRSLLTRTRNLLSTMQRQDVMDRIILAV 240

Query: 255 -----------------------RMATPAIKAGMVKQANQIPRDIEHGRNPVQANDDLIH 299
                                  RMAT AIKAGMVKQAN IPRD   GRNPVQAN+DLIH
Sbjct: 241 GFFFFSLAVLYVVSKRIGLLKLQRMATAAIKAGMVKQANHIPRD--GGRNPVQANEDLIH 288

[Close]

BLAST of Spg034609 vs. ExPASy TrEMBL
Match: A0A6J1H7T9 (uncharacterized protein LOC111461229 OS=Cucurbita moschata OX=3662 GN=LOC111461229 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 3.1e-76
Identity = 180/253 (71.15%), Postives = 187/253 (73.91%), Query Frame = 0


Query: 75  LQNSLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANVQAKANMRKAAQEERER 134
           L+  LDLL PQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNAN+QAKANMRKAAQEERE+
Sbjct: 61  LEFKLDLLAPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANMQAKANMRKAAQEEREQ 120

Query: 135 LLGGGEESTIRRRNLQTKARMTSAAESIIESLRRTRQLMVQEVERTASTIETFGHLDPKS 194
           LLGGGEESTIRRRNLQTKA MTSAAESI ESLRRTRQLMVQEVERTASTIETF       
Sbjct: 121 LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTASTIETF------- 180

Query: 195 CKGFPFLVYLQLGHSCKESTGVLKKAESEYKGHRSLLMRTRNLLSTMQRQDVMD------ 254
                           +ESTGVLKKAESEYKGHRSLL RTRNLLSTMQRQDVMD      
Sbjct: 181 ----------------EESTGVLKKAESEYKGHRSLLTRTRNLLSTMQRQDVMDRIILAV 240

Query: 255 -----------------------RMATPAIKAGMVKQANQIPRDIEHGRNPVQANDDLIH 299
                                  RMAT AIKAGMVKQANQIPRD   GRNPVQAN+DLIH
Sbjct: 241 GFFFFSLAVLYVVSKRIGLLKLQRMATAAIKAGMVKQANQIPRD--GGRNPVQANEDLIH 288

[Close]

BLAST of Spg034609 vs. ExPASy TrEMBL
Match: A0A6J1DTI9 (uncharacterized protein LOC111023863 OS=Momordica charantia OX=3673 GN=LOC111023863 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 9.0e-76
Identity = 174/253 (68.77%), Postives = 185/253 (73.12%), Query Frame = 0


Query: 75  LQNSLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANVQAKANMRKAAQEERER 134
           L+  LDLL PQLLSDSEVEAAQSL+ESWKNQSHNLRSSLRNAN+QAKANMRKAAQEERER
Sbjct: 61  LEFKLDLLAPQLLSDSEVEAAQSLIESWKNQSHNLRSSLRNANMQAKANMRKAAQEERER 120

Query: 135 LLGGGEESTIRRRNLQTKARMTSAAESIIESLRRTRQLMVQEVERTASTIETFGHLDPKS 194
           LLGGGEESTIRRRNLQTKA MTSAAESI ESLRRTRQLMVQEVERTA+TIETF       
Sbjct: 121 LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTANTIETF------- 180

Query: 195 CKGFPFLVYLQLGHSCKESTGVLKKAESEYKGHRSLLMRTRNLLSTMQRQDVMD------ 254
                           +ESTGVLKKAE+EYKGHRSLL RTRNLLSTMQRQDVMD      
Sbjct: 181 ----------------EESTGVLKKAETEYKGHRSLLTRTRNLLSTMQRQDVMDRIILAV 240

Query: 255 -----------------------RMATPAIKAGMVKQANQIPRDIEHGRNPVQANDDLIH 299
                                  RMAT AIKAGMVKQA+ IPRDI HGRNP+Q N+DL++
Sbjct: 241 GFFFFSLAVLYVVSKRIGLLKLQRMATAAIKAGMVKQADNIPRDINHGRNPIQGNEDLVY 290

[Close]

BLAST of Spg034609 vs. ExPASy TrEMBL
Match: A0A5A7TE96 (Putative vesicle transporter Sec20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002810 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 1.6e-72
Identity = 175/255 (68.63%), Postives = 183/255 (71.76%), Query Frame = 0


Query: 75  LQNSLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANVQAKANMRKAAQEERER 134
           L+  LDLL PQLLSDSE+EAAQSLLESWKNQS NLRSSLRNAN+QAKANMRKAAQEERER
Sbjct: 61  LEFKLDLLAPQLLSDSEIEAAQSLLESWKNQSQNLRSSLRNANMQAKANMRKAAQEERER 120

Query: 135 LLGGGEESTIRRRNLQTKARMTSAAESIIESLRRTRQLMVQEVERTASTIETFGHLDPKS 194
           LLGGGEESTIRRRNLQTKA MTSAAESI ESLRRTRQLMVQEVERTASTIETF       
Sbjct: 121 LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTASTIETF------- 180

Query: 195 CKGFPFLVYLQLGHSCKESTGVLKKAESEYKGHRSLLMRTRNLLSTMQRQDVMD------ 254
                           +ESTGVLKKAESEYKGHRSLL RTRNLLSTMQRQDVMD      
Sbjct: 181 ----------------EESTGVLKKAESEYKGHRSLLTRTRNLLSTMQRQDVMDRIILAV 240

Query: 255 -----------------------RMATPAIKAGMVKQANQIPRD-IEHGRNPVQA-NDDL 299
                                  RMAT AIKAGM KQANQIP D I HGRNPVQA  +DL
Sbjct: 241 GFFFFSLAVLYVVSKRIGLLKLQRMATAAIKAGMAKQANQIPGDVINHGRNPVQAKEEDL 292

[Close]

BLAST of Spg034609 vs. ExPASy TrEMBL
Match: E5GCN4 (Vesicle transport protein SEC20 OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 1.6e-72
Identity = 175/255 (68.63%), Postives = 183/255 (71.76%), Query Frame = 0


Query: 75  LQNSLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANVQAKANMRKAAQEERER 134
           L+  LDLL PQLLSDSE+EAAQSLLESWKNQS NLRSSLRNAN+QAKANMRKAAQEERER
Sbjct: 61  LEFKLDLLAPQLLSDSEIEAAQSLLESWKNQSQNLRSSLRNANMQAKANMRKAAQEERER 120

Query: 135 LLGGGEESTIRRRNLQTKARMTSAAESIIESLRRTRQLMVQEVERTASTIETFGHLDPKS 194
           LLGGGEESTIRRRNLQTKA MTSAAESI ESLRRTRQLMVQEVERTASTIETF       
Sbjct: 121 LLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTASTIETF------- 180

Query: 195 CKGFPFLVYLQLGHSCKESTGVLKKAESEYKGHRSLLMRTRNLLSTMQRQDVMD------ 254
                           +ESTGVLKKAESEYKGHRSLL RTRNLLSTMQRQDVMD      
Sbjct: 181 ----------------EESTGVLKKAESEYKGHRSLLTRTRNLLSTMQRQDVMDRIILAV 240

Query: 255 -----------------------RMATPAIKAGMVKQANQIPRD-IEHGRNPVQA-NDDL 299
                                  RMAT AIKAGM KQANQIP D I HGRNPVQA  +DL
Sbjct: 241 GFFFFSLAVLYVVSKRIGLLKLQRMATAAIKAGMAKQANQIPGDVINHGRNPVQAKEEDL 292

[Close]

BLAST of Spg034609 vs. TAIR 10
Match: AT3G24315.1 (Sec20 family protein )

HSP 1 Score: 189.9 bits (481), Expect = 3.5e-48
Identity = 113/176 (64.20%), Postives = 130/176 (73.86%), Query Frame = 0


Query: 75  LQNSLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANVQAKANMRKAAQEERER 134
           LQ +LDLL PQL SD +V++ QSLLE+WKNQ H+LR +LR+AN+QAK NMRKAAQEERE 
Sbjct: 64  LQFNLDLLAPQLPSDDQVQSTQSLLETWKNQYHSLRVNLRSANLQAKDNMRKAAQEEREL 123

Query: 135 LLGGGEESTIRRRNLQTKARMTSAAESIIESLRRTRQLMVQEVERTASTIETFGHLDPKS 194
           LLGGG EST+ RR  Q  A +TS AESI ESLRR+RQLMVQEVER+ +T+  F       
Sbjct: 124 LLGGGTESTVLRRKRQANAGVTSDAESITESLRRSRQLMVQEVERSTNTLVAF------- 183

Query: 195 CKGFPFLVYLQLGHSCKESTGVLKKAESEYKGHRSLLMRTRNLLSTMQRQDVMDRM 251
                            ESTGVLKKAESEYKGHRSLL RTRNLLSTMQRQDV+DR+
Sbjct: 184 ----------------DESTGVLKKAESEYKGHRSLLSRTRNLLSTMQRQDVIDRI 216

The following BLAST results are available for this feature:

BLAST of Spg034609 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875148.1	7.6e-77	69.96	uncharacterized protein LOC120067685 isoform X2 [Benincasa hispida]	[more]
XP_023005057.1	4.9e-76	71.54	uncharacterized protein LOC111498164 [Cucurbita maxima]	[more]
XP_022960516.1	6.4e-76	71.15	uncharacterized protein LOC111461229 [Cucurbita moschata] >KAG6592931.1 Vesicle ...	[more]
KAG7025339.1	1.4e-75	70.75	Vesicle transport protein SEC20 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022157044.1	1.9e-75	68.77	uncharacterized protein LOC111023863 [Momordica charantia] >XP_022157045.1 uncha...	[more]

BLAST of Spg034609 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg034609 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KS49	2.4e-76	71.54	uncharacterized protein LOC111498164 OS=Cucurbita maxima OX=3661 GN=LOC111498164...	[more]
A0A6J1H7T9	3.1e-76	71.15	uncharacterized protein LOC111461229 OS=Cucurbita moschata OX=3662 GN=LOC1114612...	[more]
A0A6J1DTI9	9.0e-76	68.77	uncharacterized protein LOC111023863 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A5A7TE96	1.6e-72	68.63	Putative vesicle transporter Sec20 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
E5GCN4	1.6e-72	68.63	Vesicle transport protein SEC20 OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

BLAST of Spg034609 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24315.1	3.5e-48	64.20	Sec20 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 99..133
IPR005606	Sec20	PFAM	PF03908	Sec20	coord: 211..250 e-value: 4.6E-8 score: 32.9
IPR005606	Sec20	PANTHER	PTHR12825	BNIP1-RELATED	coord: 73..250

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg034609.1	Spg034609.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
cellular_component	GO:0016020	membrane
molecular_function	GO:0005484	SNAP receptor activity