Spg034592 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg034592
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold4: 16116287 .. 16120714 (+)
RNA-Seq Expression	Spg034592
Synteny	Spg034592

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGCTTGCGGTTGTGGCAACAGTGTCCACTCCTTGACATTGATCCGGAGATAAAAAGAACCTTTCGACGTCGAAGGAAGGAACAGAGTCGAAAGAAAAAGGAGCAACAAGAGTTGAGCGCACGGGAATCTCTAGAGGAAACATCTTACATTCAAGAGTTTCCAATGGAACCTCCTAGAGTCGAGCCTCGAGTTGATCCACAAGATCGTGGAAAGGAGCAGAACGGCAGGAGAATTCCTCCTGTTCCTCCAGTTCCACCGGTGCCACAACAAGAAAACCCGATTTACATTGCTGAAGATCCCAACAGAGCAATAAGGGATTACGCTTTACCATTTTTCCAGACGTTGAATCCAGGATATTTGGAGCCACCGATAGATGCTCCACAGTTTGAACTTAAACCAGTGATGTTCCAGATGTTGAATACAATGGGCCAATTCTCTGGACTTCCAAACGAAGATCCACACAAACATATTAAGCTATTTTTGAGAGTTTGCAATTCTTTCAAAGTAACAAGAGTGCCTGAGGATACCTTGAAGCTAAAACTTTTTCCATTTTCTTTGCAGGGAGATGGTGAAGCTTGGTTGGATTCATTTCCTCCAAACTCCATCACCTCTTGGAATGATTTGGCGGAGAAATTCTTAGAGAAGTTATTCCCCTCCAATAAAAATGCCAAGTACAGAGCTGAGATTATTGCTTTCAGACAATCTTACAATGAACCTTTGGATGCAGCTTGGGAAAGATTTCAAATGCTGGCTCGAAAGTGTCCACACCATGGATTTCCATTTTGGAGCATTTTTATAGTGGACTAGATCAAGCTTCAAAGGCACTAGTAAACGCATCTGCAAATGGATCTTTCCTGAAGAAGTCTGCTAATGAGGCGCATGCTATTCTAGACACCATAGCCACCAACAATCGACATTGGGGAGAAAATGAACCAACAACCATTTTGAAAAATCCAGTGAAAGCAGTGGAAACAGAGGCCAACTCTACGATGCAAGCCCAGATCAAGGCTATCCATAGCATGATGATGGGCATGACCATGAACAATCAAGCCAATATAGCCCCTGCCAATTCTATTTCTTCCCTTTGTTGAGAGATATGTGGTGAGGAACACATCGCTGATAATTGTCCACTAAATCCAGCATCTATTTTTTATGTAGGTCCATAAGGAAATCAGAACCAGAATAGATGGAATCCTTATTTGGCCACGTACAACCTAGGATGGAGACAACATCCAAATTTTTCTTGGGGAGGACAAGCCGGGTCGAGTAATTCCAACACAAATCAATTTGGGAAGCATCCTACACAACAACAGCCGCAGAAAAACTTCCAACAAGTTCCAGCTCAGAGTCAAGAGTCAAATCTAGAGACTCTTATAAAGGAGTACATGGCGAGAAACGATGCTGCAGTAAGGAATTTGGAAGTTCAGCTTGGACAAATTGCTCAGGAGATTAAGAATAGACCGCAAGGCACATTGCCTAGCAAAACCGAGATCCCTCACAGAGAAGGAAAGGAACAATGCAAGGCAGTGACCCTAAGAAGTGGATTAGAATACGATGGACCAAAGTATCCAGTAAATCAAGAAGCAGAGATCCCAGTTGAAGCTCGAGAAAAAATTGTTGAAAAGAAGTCAGACATTACCTCGGATAGTTTACAGAATAAAGAAGAAAAAAATAGAAAAGGCCAAGGAGCATGAAGCCTTGGTAGAAAAATAAGAAAAATCAAAGTTGGAGAAAAAGGGGAATGCGACCGCAAAACCCCAGAAATTTGTGATAGACCCAGATTTCATACCACCTCCTCCGTATCCACAGAGATTCAAACATGCCTCACAAGATGTACAGTTCAAGAAGTTTTTAGATGTATTGAAGCAGTTGTACATCAACATACCATTAGTGGAGGCACTTGAACAAATGCCTACCTATGTGAAATTTCTGAAAGATATCCTATCAAAAAAGAGAAGGTTGGGAGAATACAAAACGGTTGCACTCACGGAATGTTCTAGTGCATTAGTGAAAAACGAGATTCCTCCCAAGCTTAAAGACCCAGGAAGTTTCACTATTCCGTGCTCCATTGGAGGCTGGGATGTAGGCAGAGCTTTGTGCGACTTAGGAGCAAGCATTAACTTAATGCCATTCTCGATTTTTAAACAATTAGGGATAGGTGAAGCCCGATCGACAACTGTAACTCTACAGTTGGCAGATAGATCACTCACACATCCCATTGGAAAGATTGAAGACGTATTGGTCAAGGTTGATATGTTTGTTTTTCCTGCAGATTTCATCATTTTAGATTGTGAAGCCGACAGGGACGTGCCGATCATCTTAGGACTACCGTTCCTAGCTATCGACAGAACCTTAATAGATGTGCAGAAAGGAGAATTGACCATGAGGGTCAACGATCAGCAAGTCACGTTTAACGTGATGAATGCAATGAAGTACCCTGGAGATTTTGAGGAATGTTCTATGATTGATGAAATTGATGAACTCTCCCGGTCTACTTTGCAGGAAATAATGAAAAGGGAAACCTTGGAGGATATACTTGGAGATAAGGAATCAGAAGAAAAAGGTAGGAAGACAATTGAAGTCGAAGAGGTCAATCAACTCATAAAGCGACAGAGGATCAAACCATATTGGGGAAAAGGCTTCGAGGATGAGGAGACCCATGTCTCCGTGATTGACCTGGTATGATTTCTATACTTTGAGAAGTTATTTTGTATGTTATCTGGATCTATTGTGGAATAAGATAATAATCTAGACAAGAACTCCAAAATATCTGGACAAGAGTAAAGACTCTGTCTAAGAAAAGGTATTTAAGATGACCATTGGGAACACCTTTTCCTGGGGATTTACCTAGGAGTCTTAAAAAGTCCATATTATTTTGTGCCTTGTCTCGTGTTTGGAATAAGAGTAAAAAAAGAAAAAGTGTAAGTTTGTTTTGAATAAATGATTTTCGATCAAGAGGGAACTTTGTCTGAGTAAAGTCCTGATTAGGCTGAGGTATTTAAGCTGACCTTTGGGAACACCTCTACCTGGGGACTTACCTGGAAGTTGAATTGATCAAAACATTTAGTCTTAAAAAAAAAAGAGAAAAATATATATATAAATCATGATTAAGCATGTGAATTTTTCTAACATGTTTATGAGTGTTTCAGCAAAGAAGAAAAGCAAAGGAAAGTTAAAAAGTCAGAAAAAAATAAAGAAAGCAGAAAAACTGGGTGAAATGCGACCGCATTTCTCCCCAGTGTATTTGAGAATGCGATCGCATTTTCAAAAATAAGTGGGGAGTCACGAATTTCGTTTGACCTGCACATGACCTAATTGGAAAAGTATAAATAGCTGACTTTAGTTCTTTTTCTCTTCACCAACCACTAAACCCTTTGCATTCAAGTCAAAACCTCAACTCTCCATATTCTCTCATCTTGAAACCGAAAAACCCACATTCAAGAAGATGAAGAACACTCCAAATCCCTCATCATCACGCAAGAACACTCTATCTCAGAGTGCTCAAGCAACCCACGAAGCTGAAACAAGCGTGCGACGGCAAGAGGAGCGATCCGAAACGCCCATGCAAGGCACACGAAGGACGAGACCCACGGGATTCTCGCCGACGATCGTGAACGTCGGACCCAGCACTCAAACTCCATCTTCTTCGATAATGCCGACCAGTTCGAGGGAGATGCCAAGTTCGTCTATGCCAAGGAGGTTCATGCGCACCACTGCCGTCCGCCAAACCCAAAAGCCCGCCTCTCAACAGTTTGGAAAACTTTTGCGGGAATGGTTTGCGATGATCCGAGAGATGGGAGCTCAGAGACGTGCTGTCCTTGAAGAAGAAGGGAATCAGCAAGAGGGAACTTCATCGGGTAAGCATTTTGAACCTTCGACTAACCCCTCTTCATCTTTCAGGACCAAACCCTTTGTTACCTATAGCGCAAGAAAGAGGAGCCCGAAGAAGGTTGTGCTACCGCGAGAATGCCTCCGGACGTATTTGAAAATATAATTCGCCAAGCAGTGGCAAAGGCCCTCGTGATTGCTGAAGGGTACAGGGCTGAACAGGATGCTTTGAAAGAGGTAGAAGCTGAGAGAGAGATGGAAAATCTGCATATGATGGAGGAGGATGACTTTGCGAAGAGAAGAGATGAGGAAGAAGAGAAAAGAAGGAGAGAAGAAGAACAAGAGGCCGAGAGGGCCTTAGAAGCTGAGGAAGAAAGAAAGTTTGAGGAAAACCTCAAGAGGGCAGCCATTGATTTGCAACTCCTTGAGGAAGAGAAAAAGAGAGGGGAAGAAATAAAAGAAGATGAGAAAAAAAGGAAGGAAGCGGAAGACTTCCTTGCAGCCTTTGAGCCACTCCACAAGGCTCAACAGGAAGCTGAATTGCTGCAAGGGAGGGTAGAAGAAGAGACCCAACCAGGGCCAAGAGAAGAAAATTAA

mRNA sequence

ATGCGCTTGCGGTTGTGGCAACAGTGTCCACTCCTTGACATTGATCCGGAGATAAAAAGAACCTTTCGACGTCGAAGGAAGGAACAGAGTCGAAAGAAAAAGGAGCAACAAGAGTTGAGCGCACGGGAATCTCTAGAGGAAACATCTTACATTCAAGAGTTTCCAATGGAACCTCCTAGAGTCGAGCCTCGAGAATCAGAAGAAAAAGGTAGGAAGACAATTGAAGTCGAAGAGGTCAATCAACTCATAAAGCGACAGAGGATCAAACCATATTGGGGAAAAGGCTTCGAGGATGAGGAGACCCATGTCTCCGTGATTGACCTGTCAAAACCTCAACTCTCCATATTCTCTCATCTTGAAACCGAAAAACCCACATTCAAGAAGATGAAGAACACTCCAAATCCCTCATCATCACGCAAGAACACTCTATCTCAGAGTGCTCAAGCAACCCACGAAGCTGAAACAAGCGTGCGACGGCAAGAGGAGCGATCCGAAACGCCCATGCAAGGCACACGAAGGACGAGACCCACGGGATTCTCGCCGACGATCGTGAACGTCGGACCCAGCACTCAAACTCCATCTTCTTCGATAATGCCGACCAGTTCGAGGGAGATGCCAAGTTCGTCTATGCCAAGGAGGTTCATGCGCACCACTGCCGTCCGCCAAACCCAAAAGCCCGCCTCTCAACAGTTTGGAAAACTTTTGCGGGAATGGTTTGCGATGATCCGAGAGATGGGAGCTCAGAGACGTGCTGTCCTTGAAGAAGAAGGGAATCAGCAAGAGGGAACTTCATCGGAGGAGCCCGAAGAAGGTTGTGCTACCGCGAGAATGCCTCCGGACGTATTTGAAAATATAATTCGCCAAGCAGTGGCAAAGGCCCTCGTGATTGCTGAAGGGTACAGGGCTGAACAGGATGCTTTGAAAGAGGTAGAAGCTGAGAGAGAGATGGAAAATCTGCATATGATGGAGGAGGATGACTTTGCGAAGAGAAGAGATGAGGAAGAAGAGAAAAGAAGGAGAGAAGAAGAACAAGAGGCCGAGAGGGCCTTAGAAGCTGAGGAAGAAAGAAAGTTTGAGGAAAACCTCAAGAGGGCAGCCATTGATTTGCAACTCCTTGAGGAAGAGAAAAAGAGAGGGGAAGAAATAAAAGAAGATGAGAAAAAAAGGAAGGAAGCGGAAGACTTCCTTGCAGCCTTTGAGCCACTCCACAAGGCTCAACAGGAAGCTGAATTGCTGCAAGGGAGGGTAGAAGAAGAGACCCAACCAGGGCCAAGAGAAGAAAATTAA

Coding sequence (CDS)

ATGCGCTTGCGGTTGTGGCAACAGTGTCCACTCCTTGACATTGATCCGGAGATAAAAAGAACCTTTCGACGTCGAAGGAAGGAACAGAGTCGAAAGAAAAAGGAGCAACAAGAGTTGAGCGCACGGGAATCTCTAGAGGAAACATCTTACATTCAAGAGTTTCCAATGGAACCTCCTAGAGTCGAGCCTCGAGAATCAGAAGAAAAAGGTAGGAAGACAATTGAAGTCGAAGAGGTCAATCAACTCATAAAGCGACAGAGGATCAAACCATATTGGGGAAAAGGCTTCGAGGATGAGGAGACCCATGTCTCCGTGATTGACCTGTCAAAACCTCAACTCTCCATATTCTCTCATCTTGAAACCGAAAAACCCACATTCAAGAAGATGAAGAACACTCCAAATCCCTCATCATCACGCAAGAACACTCTATCTCAGAGTGCTCAAGCAACCCACGAAGCTGAAACAAGCGTGCGACGGCAAGAGGAGCGATCCGAAACGCCCATGCAAGGCACACGAAGGACGAGACCCACGGGATTCTCGCCGACGATCGTGAACGTCGGACCCAGCACTCAAACTCCATCTTCTTCGATAATGCCGACCAGTTCGAGGGAGATGCCAAGTTCGTCTATGCCAAGGAGGTTCATGCGCACCACTGCCGTCCGCCAAACCCAAAAGCCCGCCTCTCAACAGTTTGGAAAACTTTTGCGGGAATGGTTTGCGATGATCCGAGAGATGGGAGCTCAGAGACGTGCTGTCCTTGAAGAAGAAGGGAATCAGCAAGAGGGAACTTCATCGGAGGAGCCCGAAGAAGGTTGTGCTACCGCGAGAATGCCTCCGGACGTATTTGAAAATATAATTCGCCAAGCAGTGGCAAAGGCCCTCGTGATTGCTGAAGGGTACAGGGCTGAACAGGATGCTTTGAAAGAGGTAGAAGCTGAGAGAGAGATGGAAAATCTGCATATGATGGAGGAGGATGACTTTGCGAAGAGAAGAGATGAGGAAGAAGAGAAAAGAAGGAGAGAAGAAGAACAAGAGGCCGAGAGGGCCTTAGAAGCTGAGGAAGAAAGAAAGTTTGAGGAAAACCTCAAGAGGGCAGCCATTGATTTGCAACTCCTTGAGGAAGAGAAAAAGAGAGGGGAAGAAATAAAAGAAGATGAGAAAAAAAGGAAGGAAGCGGAAGACTTCCTTGCAGCCTTTGAGCCACTCCACAAGGCTCAACAGGAAGCTGAATTGCTGCAAGGGAGGGTAGAAGAAGAGACCCAACCAGGGCCAAGAGAAGAAAATTAA

Protein sequence

MRLRLWQQCPLLDIDPEIKRTFRRRRKEQSRKKKEQQELSARESLEETSYIQEFPMEPPRVEPRESEEKGRKTIEVEEVNQLIKRQRIKPYWGKGFEDEETHVSVIDLSKPQLSIFSHLETEKPTFKKMKNTPNPSSSRKNTLSQSAQATHEAETSVRRQEERSETPMQGTRRTRPTGFSPTIVNVGPSTQTPSSSIMPTSSREMPSSSMPRRFMRTTAVRQTQKPASQQFGKLLREWFAMIREMGAQRRAVLEEEGNQQEGTSSEEPEEGCATARMPPDVFENIIRQAVAKALVIAEGYRAEQDALKEVEAEREMENLHMMEEDDFAKRRDEEEEKRRREEEQEAERALEAEEERKFEENLKRAAIDLQLLEEEKKRGEEIKEDEKKRKEAEDFLAAFEPLHKAQQEAELLQGRVEEETQPGPREEN

Homology

The following BLAST results are available for this feature:

BLAST of Spg034592 vs.


Match Name	E-value	Identity	Description

BLAST of Spg034592 vs.


Match Name	E-value	Identity	Description

BLAST of Spg034592 vs.


Match Name	E-value	Identity	Description

BLAST of Spg034592 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 27..47
None	No IPR available	COILS	Coil	Coil	coord: 324..389
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..210
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 317..358
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..210
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 373..428
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 253..272
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 410..428
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 373..398

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg034592.1	Spg034592.1	mRNA