
Spg034478 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACAATAATAGCGATGGATGAACCTAGAGATGCTCTCAGCTAAGCCTTTTTCAACGTCAACCTTCCCCCTGAAAAAGCCAAGAAACTGATTCCTTTTCATACTTTGCAGCCTCATCTTTCTCTTTTGCATTCCCCTTTTTACACAAATACTAAACTACAATTTCTCAAAAACAGAGAGAAGCCATGGAGTCTAAAACAGAGCAGAATTCCTCAGTTGCAAGGCTCCCACTCTTTTCAATCCCACACCAAGCACTGGACTCACCAGAACGCTCAGGGATGCTGACTCCGCCGATCTACGCCGTCGCATCCGTCCCGTTTCGGTGGGAAGAAGAGCCTGGCAAGCCCAGGTTCAGTACCATCGCCGCTGCAGCCGCCGCCTCTCCGAGCTTGGAGCTGCCTCCAAGGCTTTTGTTGATGGAGAGAGTGCCAAGATCTGAGTGTTCATCTTCCTTTAGAATGATGGGTGGAGAATGCTATGATGAGAGGAGTGGTTTGTTTATGAGGAAAAGAGGTTGGTTTGGGTTTGGGTTTGGGTCATGGAGAAGAAGGGGTTTTGGTTTGAGAAGCAAAAGAGATGATGTTGGAATTGGAGGCCTTGTGTTTCCATCCTTGGAATTGGAAGAGAGTTTTGATTCAAAAGTGGAGACTTCAAGGTTTAGAAGAAATGGGAGTTTTTCAAGTCTAACTACTCAAATTAGGCCTCATTTTTGGGTGAGTATTTCTTAATCTCTTTTGAGTTTGTGTTTTTTTTTATGGTGGCTTATGTCAATTGGTGCTGCAGGAAAGTGTATGTGAAAGTTTGAAGCATGTGGTTCCATGGAAAAGCAAAAGGCAGAAGAGAGATGCTTAGTTTGTTGTAATTTTCAACCAATTGCAATAATGCAAGTACTAAAGCCTGTTGATATGTTGTTGATTTCTCTGTCTTCTTAAACATTTTCTTGAGATTTGTAGGTTAAGATTTGCCTTTCTCTTTGACCATGTTAAGACTATTTCCATAACAAAATGTGCAACTAGCCTTATCTAATTTTTTTTTTTTCCCCTTATCATGTGGGCTGCCTTGCCCTTTCC ATGGAGTCTAAAACAGAGCAGAATTCCTCAGTTGCAAGGCTCCCACTCTTTTCAATCCCACACCAAGCACTGGACTCACCAGAACGCTCAGGGATGCTGACTCCGCCGATCTACGCCGTCGCATCCGTCCCGTTTCGGTGGGAAGAAGAGCCTGGCAAGCCCAGGTTCAGTACCATCGCCGCTGCAGCCGCCGCCTCTCCGAGCTTGGAGCTGCCTCCAAGGCTTTTGTTGATGGAGAGAGTGCCAAGATCTGAGTGTTCATCTTCCTTTAGAATGATGGGTGGAGAATGCTATGATGAGAGGAGTGGTTTGTTTATGAGGAAAAGAGGTTGGTTTGGGTTTGGGTTTGGGTCATGGAGAAGAAGGGGTTTTGGTTTGAGAAGCAAAAGAGATGATGTTGGAATTGGAGGCCTTGTGTTTCCATCCTTGGAATTGGAAGAGAGTTTTGATTCAAAAGTGGAGACTTCAAGGTTTAGAAGAAATGGGAGTTTTTCAAGTCTAACTACTCAAATTAGGCCTCATTTTTGGGAAAGTGTATGTGAAAGTTTGAAGCATGTGGTTCCATGGAAAAGCAAAAGGCAGAAGAGAGATGCTTAG ATGGAGTCTAAAACAGAGCAGAATTCCTCAGTTGCAAGGCTCCCACTCTTTTCAATCCCACACCAAGCACTGGACTCACCAGAACGCTCAGGGATGCTGACTCCGCCGATCTACGCCGTCGCATCCGTCCCGTTTCGGTGGGAAGAAGAGCCTGGCAAGCCCAGGTTCAGTACCATCGCCGCTGCAGCCGCCGCCTCTCCGAGCTTGGAGCTGCCTCCAAGGCTTTTGTTGATGGAGAGAGTGCCAAGATCTGAGTGTTCATCTTCCTTTAGAATGATGGGTGGAGAATGCTATGATGAGAGGAGTGGTTTGTTTATGAGGAAAAGAGGTTGGTTTGGGTTTGGGTTTGGGTCATGGAGAAGAAGGGGTTTTGGTTTGAGAAGCAAAAGAGATGATGTTGGAATTGGAGGCCTTGTGTTTCCATCCTTGGAATTGGAAGAGAGTTTTGATTCAAAAGTGGAGACTTCAAGGTTTAGAAGAAATGGGAGTTTTTCAAGTCTAACTACTCAAATTAGGCCTCATTTTTGGGAAAGTGTATGTGAAAGTTTGAAGCATGTGGTTCCATGGAAAAGCAAAAGGCAGAAGAGAGATGCTTAG MESKTEQNSSVARLPLFSIPHQALDSPERSGMLTPPIYAVASVPFRWEEEPGKPRFSTIAAAAAASPSLELPPRLLLMERVPRSECSSSFRMMGGECYDERSGLFMRKRGWFGFGFGSWRRRGFGLRSKRDDVGIGGLVFPSLELEESFDSKVETSRFRRNGSFSSLTTQIRPHFWESVCESLKHVVPWKSKRQKRDA Homology
BLAST of Spg034478 vs. NCBI nr
Match: XP_038875382.1 (uncharacterized protein At4g00950-like [Benincasa hispida]) HSP 1 Score: 275.8 bits (704), Expect = 2.9e-70 Identity = 143/202 (70.79%), Postives = 164/202 (81.19%), Query Frame = 0
BLAST of Spg034478 vs. NCBI nr
Match: XP_008459763.1 (PREDICTED: uncharacterized protein At4g00950 [Cucumis melo]) HSP 1 Score: 261.5 bits (667), Expect = 5.7e-66 Identity = 137/197 (69.54%), Postives = 159/197 (80.71%), Query Frame = 0
BLAST of Spg034478 vs. NCBI nr
Match: XP_004140632.2 (uncharacterized protein At4g00950 [Cucumis sativus] >KGN46492.1 hypothetical protein Csa_005492 [Cucumis sativus]) HSP 1 Score: 259.6 bits (662), Expect = 2.2e-65 Identity = 140/204 (68.63%), Postives = 157/204 (76.96%), Query Frame = 0
BLAST of Spg034478 vs. NCBI nr
Match: XP_023005080.1 (uncharacterized protein LOC111498174 [Cucurbita maxima] >XP_023005081.1 uncharacterized protein LOC111498174 [Cucurbita maxima]) HSP 1 Score: 228.4 bits (581), Expect = 5.4e-56 Identity = 132/198 (66.67%), Postives = 144/198 (72.73%), Query Frame = 0
BLAST of Spg034478 vs. NCBI nr
Match: XP_022960155.1 (uncharacterized protein At4g00950-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 226.1 bits (575), Expect = 2.7e-55 Identity = 131/202 (64.85%), Postives = 143/202 (70.79%), Query Frame = 0
BLAST of Spg034478 vs. ExPASy Swiss-Prot
Match: Q9M160 (Uncharacterized protein At4g00950 OS=Arabidopsis thaliana OX=3702 GN=At4g00950 PE=2 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.3e-12 Identity = 84/292 (28.77%), Postives = 118/292 (40.41%), Query Frame = 0
BLAST of Spg034478 vs. ExPASy TrEMBL
Match: A0A1S3CBE3 (uncharacterized protein At4g00950 OS=Cucumis melo OX=3656 GN=LOC103498800 PE=4 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 2.8e-66 Identity = 137/197 (69.54%), Postives = 159/197 (80.71%), Query Frame = 0
BLAST of Spg034478 vs. ExPASy TrEMBL
Match: A0A0A0KDR5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G103510 PE=4 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 1.1e-65 Identity = 140/204 (68.63%), Postives = 157/204 (76.96%), Query Frame = 0
BLAST of Spg034478 vs. ExPASy TrEMBL
Match: A0A6J1KTY4 (uncharacterized protein LOC111498174 OS=Cucurbita maxima OX=3661 GN=LOC111498174 PE=4 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 2.6e-56 Identity = 132/198 (66.67%), Postives = 144/198 (72.73%), Query Frame = 0
BLAST of Spg034478 vs. ExPASy TrEMBL
Match: A0A6J1H8B1 (uncharacterized protein At4g00950-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460982 PE=4 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 1.3e-55 Identity = 131/202 (64.85%), Postives = 143/202 (70.79%), Query Frame = 0
BLAST of Spg034478 vs. ExPASy TrEMBL
Match: A0A6J1H6U8 (uncharacterized protein At4g00950-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460982 PE=4 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 4.9e-47 Identity = 116/180 (64.44%), Postives = 126/180 (70.00%), Query Frame = 0
BLAST of Spg034478 vs. TAIR 10
Match: AT4G00950.1 (Protein of unknown function (DUF688) ) HSP 1 Score: 74.7 bits (182), Expect = 9.3e-14 Identity = 84/292 (28.77%), Postives = 118/292 (40.41%), Query Frame = 0
BLAST of Spg034478 vs. TAIR 10
Match: AT5G53030.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 73.2 bits (178), Expect = 2.7e-13 Identity = 71/229 (31.00%), Postives = 94/229 (41.05%), Query Frame = 0
BLAST of Spg034478 vs. TAIR 10
Match: AT2G46535.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF688) (TAIR:AT3G61840.1); Has 48 Blast hits to 48 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 65.9 bits (159), Expect = 4.3e-11 Identity = 57/174 (32.76%), Postives = 81/174 (46.55%), Query Frame = 0
BLAST of Spg034478 vs. TAIR 10
Match: AT4G27810.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G53030.1); Has 73 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 64.3 bits (155), Expect = 1.3e-10 Identity = 63/208 (30.29%), Postives = 91/208 (43.75%), Query Frame = 0
BLAST of Spg034478 vs. TAIR 10
Match: AT5G53030.2 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 61.6 bits (148), Expect = 8.1e-10 Identity = 64/209 (30.62%), Postives = 84/209 (40.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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