Spg034461 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg034461
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	RGG repeats nuclear RNA binding protein A-like
Location	scaffold4: 16103819 .. 16108467 (-)
RNA-Seq Expression	Spg034461
Synteny	Spg034461

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTCATATAACAAACGTTCGAAGGACGGAAATAAATTGAGGAATTTAGGTCAGTCGTGATCTTTTGCTCTTACTCTCATTAGTCACTCTTCCATTGCGGCTAGGGTTTTCCTTTTTCTTCTATCTAACTCCTCTTGTTTTTCTACAGATCCCTTGTTCTTTCATTTATTAGATTCATGGAGCTCTTGTTATGGTAGGGTTTTCTGGTCGCCTTTCTCGGAGTGGAGTTTCTGTTTCTTGAGCTCTTTTTTGGCGTAATTGGTTTCGACATAGTTTGGAAATGGCGACCGTTAATCCATTTGATTTGTTGGGAGATGATGACGCCGAGGACCCGTCGCAGCTTATTGCGGCTAAGCAGGTGGCGCCAGTGACGGCGCCGCCTCCTAAGAAAGGTCCTGCTCAGACCAAACCGGCGGTTTCCGCGGCTCAGCAGAACAAGCCTGCTAGTCTTCCTTCCAAGCCTCTTCCACCTGCTCAGGCTGGTGAGCTCTTCGTTTCTAAATCTCTGGTTTGATTTTGAATATTTGTTCTTTTATCGCTTTCAGTTGATTGATTTTACATTTTCTGATATTGGTTGTTGTTTCGTTCTATGCTCTTTGGTTTTTTTTTTCCCTGTAAAACTATGAGTATAATGAAGGTGGTAACTGTTTTTAATTCGGTGGAAATATTGAAATTACTTCCTTTTTCTGCAAAAATAAGTACGATTTAATAACCGGCTTAGTTGTCATGTGTATTGGAGTTCAAGTTTTTTTTTAGTAATTCAGATAATACCCAATGAACTGTTTGTTTAGCTACTATAATTGGAACATTAATGAAATGAAAGTACCAAACCTTTTTTTTTAAAAAGAAATCTGAATGTCGACAATGCAGTTGTGCTTAATTAAACTAGGTTACGTAATTTCTCTTTGAATGTTCCAGGGTTTTAAAATAAATTTTAGTTTTCTTATTTTGATATGTTGTTGTCGTCCATGGTGATCATAAATAATTTGAATTTATTGATAATTGCTTACAAGTTGAACTTTACCCAGTTGAATTTATGATTGGTTATTGGTTTGGGCTCTTTTGCGGGAACTTGAGAGTTTGCGATCAATTTTTTATTCTTATGTCAGTCTTCCTTTTTGATCATTTTTCATCCTGTTAGATTATAAGTTTCCAACCTACTATTCCTCTATCCATTGGATTATATGTTTCTATTTGTATGAATTATCCATTGAGAGATTGAGATAATCTTTTTCTTACTGTGAGCAGTAAGAGAAGCAAGGAATGAAGGCAGTCGTGGAGGTCGTGGCAGTGGACGAGGAGGACGTGGATATGGGCGAGGCCGTGAGGGTGGTGGCTTCAATCGTGACTCTGCCAATAATGAGAGCAGTGGTGCCCCTGAAGATGGAGAGACTGGAAAGACAACTGAAAGGCGTGGATATACTGGGCCTCCTCGTGGTCGTGGTGGCCGTCGTGGTGGTTTCAATAATGGAGAAGCAGCTGACGGGGAACGCCCTCGTAGAGTATTTGAGCGCCACAGTGGAACTGGCCGTGGGTAAGTGTCTGTTTTATAAAAATTCATCTTACACTCCTCTGCTGTATATTCTACACTATTTTGACACTTTCATCTTGATTTTATGTCTAGAAATGAATTTAAACGTGAAGGATCTGGGCGGGGAAATTGGGGAAGGTCAACTGACGAACTTGCTGAGTAAGTACATGTGTATACTACCTTCCACCTTACTGTCTTTTTCTGTTGTATGTGCATGTGTGGGCCTTCTTTTCAACGCCTTTCTGATAGAAGCCACCTGGCTAGCTCAAAAGACCGAATTCTATGGTTACGAATGCCTTTCTCAATTGAGAAAGATGCACTCAACCGCCCAACCTGTACAAGGACATTGGACTAGCCTCTTCTTTCATATATCTTTCTCTGTTTGGAGGGGGGGGGGGTGTTGCATATTGATGCACGTGCCATTACCTCTTGTATGCTAATTAGGTTATTTTTCTCTCCTTGACAATTAATTGTACCTTCAAATTACTGTTTTATATAGGGTAGCAGAGGAAGCTGTTAATGAAACTGAAAAGAACGTGGGTGATGAGAAGCCTGTTCAAGAGGATGATACTGCTGGTGTCAACGCAGAGAACCCTGCTAAAGAACCGGAGGAAGCAGAGCCAGAAGACAAGGTTAGTATCTTCAGTTTTCTTAGTACACTTACCTTAAATATGGAGCCTACTATTTCACTTGTCCTTGATTTTCTTGGGATTGAAATGTAACTATTATTCTTGCTTGCTTGTCAAATTGAGTAGGTTTATTACTTTATTTTCAGTATCAGACATTTGATACGTGCATGAGTTGTAAACTTGATTATATATTAGCTTGATGGGCTTGGATTGTGAACTCCATTGTACTGTCTTGATTTTGAATCTAATTTACTCTTTTTTCCCCGATGCAGGAAATGACTCTGGAGGAGTATGAAAAGTTGCTGGAGGAGAAAAGGAAGGCCCTTCTGGCACTAAAAGCCGAGGAAAGGAAGGTGGATCCCAAAGAATTTGCATCCATGCAACAACTTTCAAGCAAGAAGGACAACAACGACATCTTTATTAAATTGGTACATCTACATAATCCTCTTACAGAGTCAATTATCTATGCACTGATGACTCTTGGCCTCTTGGTACGTTAAATGTGGACTTGGCTGTTTCATCTTAGTTTGTTATTCCACTTGTAGGGATCTGAGAAGGATAAGCGAAAAGAAATTGCAGATAAGGAGGAGAGAGCTAAAAAGGTATTATTACCTCATCTTCTTAAATGATTTCTTGGCCATTAGATTGTATACTCAGCTTTGATATCTAGCAAAATTTTAAAAGGCTTAGGAGACTATTGAGCTTTTTTCTTGTAGGGAGGTGAGGTGTAAGTCTTGAGGCGATATGGGGCATAAGTCTCATTTTGAACTTACAATTATTAATAAACATATAATATTATGACAATTTTGCCTTGCCACCAGAAGACGGAAAAATAACTGTAGCCATACCAGCCTCTTTTTTCATAAAATATTGTTTAGATGAATATAAACAATAATCATAGGAAAAGAGACAAAAGTAAAATAGTAAACAAGGACAGGAAATAGAAAAAAAAAAAAGAGAGAGAGAATTGACCTCTTAGCATTGTCCTCTATCACCTCCACGAACACTTTTTCCTTCTCCAAATGAAGACTAAATTATGGCTGTCTTTTAGTGTGCACTCTCTTACCTTTTAGGCATAAAGTCTGAGTATTTTTGCTTAAAATAATTTGCCAGATTGTTTGTTTATACGAAAATTAATATTTGTCTTTTTGGCACTCTCATCCCGTCAAACACAAACCCCACCAGCCACCAGCTTACTTTAAACTTTTCTCTGAAGTTTTCAATTATGCAGTGAAGCATAGTACGCCCTTCTCTGTCTCAAAAGTGTAAGCATAGAGGTGGATGCCTCTTGTGTTCAACAACGTAGGCATAAGCCACTTTTTTTGTTCAACATAGGCATAACCTCACAACTTGCCTCGAGGCTTATACATTGATGTCCTGCTTGGACAAAATGCTTTATTAGGTTGCCTTGATTCTCTCAAAACTTTAGCCTTTACACCCTTTATTGGGTCTATTTGGAATCTACCTTAAGAAATTCAATTTTCCATAATTTACTTGAATTACTTTGTGTAAAGAATATTGCATCACTACTACATCACATGTGATGGGGATTTGAACTTAGAGATATAGATCTTTTAACCGTTGAGTTACACGTTGGTTGGAAGGAATTGAGAGGAAATTAAGTATATTTAAAAATTGAGCTTTGAAGAATTTTATCTGGTTGTTAATCTTCAACTTCATCTTCATTAAAAAAAAAAAAAAAAAAAGCCCAAGTGAGCATAGCTCAACGGTACTTGGTATGTACCATTGACTAAGAGGTCAGAAATTTGATTCTCCTCATCCCCAATTGTTGTTGAACTCAAAAAATTTAAAAGACATGCCAACTTTAGATGGCAATCAAATCCAATCTTGAATTTGATTACACTAGGTTTCTAAAAAATGAATTTAATTTGTTTAATCACTATTTATTCTAGATGACAGAATTTGCTTCCTAATTCATTTCACACAAAGCTATTGGAATTTGCTTCCGAATACATTTCACACAAAGCTATGGCTCTAACTTCCAATTAGGCCCATTAGAATGGAGGTGATTTATTTTGCTTGCCCTAACATTCTTTTGGCCATTGACTTGAGTTAGTCTACATGTAAAAACACTAAATTTTGCTTTTCACATCATAACTTAGTAACGTTTTCTGCCCATCGATGGAATATATTTGTGTTCATTGTATATTATAATTTTTTGTAGTTATGAGAAACGGCTTTATGCAAATCGGTCATGTTGGTTTTTTCAGATCAGACTCCTGAAAGTATGGAAATAGACCTTGTAAAAAGTTCAATTACTGACGTTCTGTTGTTTTGTGTTTTTTTAGTCTTTTAGTATTAATGAGTTCTTGAAGCCTGTGGATGGAGAGAGGCACTATGTTCCAGGTGGCCGGGGAAGGGGACGTGGCCGTGGTTCAAGGGGAGGTTACAGTGGCAGCTCGGTAAGCAATGTTGCAGCCCCATCCATTGAGGACCCTGGGCAGTTCCCGACCTTAGGTGCGAAGTGA

mRNA sequence

ATGGCGACCGTTAATCCATTTGATTTGTTGGGAGATGATGACGCCGAGGACCCGTCGCAGCTTATTGCGGCTAAGCAGGTGGCGCCAGTGACGGCGCCGCCTCCTAAGAAAGGTCCTGCTCAGACCAAACCGGCGGTTTCCGCGGCTCAGCAGAACAAGCCTGCTAGTCTTCCTTCCAAGCCTCTTCCACCTGCTCAGGCTGTAAGAGAAGCAAGGAATGAAGGCAGTCGTGGAGGTCGTGGCAGTGGACGAGGAGGACGTGGATATGGGCGAGGCCGTGAGGGTGGTGGCTTCAATCGTGACTCTGCCAATAATGAGAGCAGTGGTGCCCCTGAAGATGGAGAGACTGGAAAGACAACTGAAAGGCGTGGATATACTGGGCCTCCTCGTGGTCGTGGTGGCCGTCGTGGTGGTTTCAATAATGGAGAAGCAGCTGACGGGGAACGCCCTCGTAGAGTATTTGAGCGCCACAGTGGAACTGGCCGTGGAAATGAATTTAAACGTGAAGGATCTGGGCGGGGAAATTGGGGAAGGTCAACTGACGAACTTGCTGAGGTAGCAGAGGAAGCTGTTAATGAAACTGAAAAGAACGTGGGTGATGAGAAGCCTGTTCAAGAGGATGATACTGCTGGTGTCAACGCAGAGAACCCTGCTAAAGAACCGGAGGAAGCAGAGCCAGAAGACAAGGAAATGACTCTGGAGGAGTATGAAAAGTTGCTGGAGGAGAAAAGGAAGGCCCTTCTGGCACTAAAAGCCGAGGAAAGGAAGGTGGATCCCAAAGAATTTGCATCCATGCAACAACTTTCAAGCAAGAAGGACAACAACGACATCTTTATTAAATTGGTACATCTACATAATCCTCTTACAGAGTCAATTATCTATGCACTGATGACTCTTGGCCTCTTGGGATCTGAGAAGGATAAGCGAAAAGAAATTGCAGATAAGGAGGAGAGAGCTAAAAAGTCTTTTAGTATTAATGAGTTCTTGAAGCCTGTGGATGGAGAGAGGCACTATGTTCCAGGTGGCCGGGGAAGGGGACGTGGCCGTGGTTCAAGGGGAGGTTACAGTGGCAGCTCGGTAAGCAATGTTGCAGCCCCATCCATTGAGGACCCTGGGCAGTTCCCGACCTTAGGTGCGAAGTGA

Coding sequence (CDS)

ATGGCGACCGTTAATCCATTTGATTTGTTGGGAGATGATGACGCCGAGGACCCGTCGCAGCTTATTGCGGCTAAGCAGGTGGCGCCAGTGACGGCGCCGCCTCCTAAGAAAGGTCCTGCTCAGACCAAACCGGCGGTTTCCGCGGCTCAGCAGAACAAGCCTGCTAGTCTTCCTTCCAAGCCTCTTCCACCTGCTCAGGCTGTAAGAGAAGCAAGGAATGAAGGCAGTCGTGGAGGTCGTGGCAGTGGACGAGGAGGACGTGGATATGGGCGAGGCCGTGAGGGTGGTGGCTTCAATCGTGACTCTGCCAATAATGAGAGCAGTGGTGCCCCTGAAGATGGAGAGACTGGAAAGACAACTGAAAGGCGTGGATATACTGGGCCTCCTCGTGGTCGTGGTGGCCGTCGTGGTGGTTTCAATAATGGAGAAGCAGCTGACGGGGAACGCCCTCGTAGAGTATTTGAGCGCCACAGTGGAACTGGCCGTGGAAATGAATTTAAACGTGAAGGATCTGGGCGGGGAAATTGGGGAAGGTCAACTGACGAACTTGCTGAGGTAGCAGAGGAAGCTGTTAATGAAACTGAAAAGAACGTGGGTGATGAGAAGCCTGTTCAAGAGGATGATACTGCTGGTGTCAACGCAGAGAACCCTGCTAAAGAACCGGAGGAAGCAGAGCCAGAAGACAAGGAAATGACTCTGGAGGAGTATGAAAAGTTGCTGGAGGAGAAAAGGAAGGCCCTTCTGGCACTAAAAGCCGAGGAAAGGAAGGTGGATCCCAAAGAATTTGCATCCATGCAACAACTTTCAAGCAAGAAGGACAACAACGACATCTTTATTAAATTGGTACATCTACATAATCCTCTTACAGAGTCAATTATCTATGCACTGATGACTCTTGGCCTCTTGGGATCTGAGAAGGATAAGCGAAAAGAAATTGCAGATAAGGAGGAGAGAGCTAAAAAGTCTTTTAGTATTAATGAGTTCTTGAAGCCTGTGGATGGAGAGAGGCACTATGTTCCAGGTGGCCGGGGAAGGGGACGTGGCCGTGGTTCAAGGGGAGGTTACAGTGGCAGCTCGGTAAGCAATGTTGCAGCCCCATCCATTGAGGACCCTGGGCAGTTCCCGACCTTAGGTGCGAAGTGA

Protein sequence

MATVNPFDLLGDDDAEDPSQLIAAKQVAPVTAPPPKKGPAQTKPAVSAAQQNKPASLPSKPLPPAQAVREARNEGSRGGRGSGRGGRGYGRGREGGGFNRDSANNESSGAPEDGETGKTTERRGYTGPPRGRGGRRGGFNNGEAADGERPRRVFERHSGTGRGNEFKREGSGRGNWGRSTDELAEVAEEAVNETEKNVGDEKPVQEDDTAGVNAENPAKEPEEAEPEDKEMTLEEYEKLLEEKRKALLALKAEERKVDPKEFASMQQLSSKKDNNDIFIKLVHLHNPLTESIIYALMTLGLLGSEKDKRKEIADKEERAKKSFSINEFLKPVDGERHYVPGGRGRGRGRGSRGGYSGSSVSNVAAPSIEDPGQFPTLGAK

Homology

[Close]

BLAST of Spg034461 vs. NCBI nr
Match: KAG7011066.1 (RGG repeats nuclear RNA binding protein B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 577.4 bits (1487), Expect = 9.1e-161
Identity = 322/381 (84.51%), Postives = 337/381 (88.45%), Query Frame = 0


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAPVTAPPPKKGPAQTKPAVSAAQQNKPASLPSK 60
           MATVNPFDLLGDDDAEDPSQLIAAKQVA VTAPPPKKG AQTKP VS +QQNKPASLPSK
Sbjct: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPPKKGSAQTKPVVSPSQQNKPASLPSK 60

Query: 61  PLPPAQAVREARNEGSRGGRGSGR-GGRGYGRGREGGGFNRDSANNESSGAPEDGETGKT 120
           PLPP+QAVREARNEGSRGGRGSGR GGRGYGRGREGGGFNRD AN+E++ APEDGE GKT
Sbjct: 61  PLPPSQAVREARNEGSRGGRGSGRGGGRGYGRGREGGGFNRDFANSENTSAPEDGEAGKT 120

Query: 121 TERRGYTGPPRGRGGRRGGFNNGEAADGERPRRVFERHSGTGRGNEFKREGSGRGNWGRS 180
           TERRGY G PRGRGGRRGGFNNGEA DGERPRRVFERHSGTGRGNE+KREG+GRGNWGR 
Sbjct: 121 TERRGY-GGPRGRGGRRGGFNNGEAGDGERPRRVFERHSGTGRGNEYKREGAGRGNWGRP 180

Query: 181 TDELAEVAEEAVNETEKNVGDEKPVQEDDTAGVNAENPAKEPEEAEPEDKEMTLEEYEKL 240
            DE AEVAEEAVNE EKNVGDEKPVQE+DT+GVN ENPAKEPEE EPEDKEMTLEEYEKL
Sbjct: 181 ADEFAEVAEEAVNEPEKNVGDEKPVQEEDTSGVNRENPAKEPEETEPEDKEMTLEEYEKL 240

Query: 241 LEEKRKALLALKAEERKVDPKEFASMQQLSSKKDNNDIFIKLVHLHNPLTESIIYALMTL 300
           LE+KRKAL+ALK EERKVDPKEFASMQQLSSKK+NNDIFIK                   
Sbjct: 241 LEDKRKALMALKTEERKVDPKEFASMQQLSSKKENNDIFIK------------------- 300

Query: 301 GLLGSEKDKRKEIADKEERAKKSFSINEFLKPVDGERHYVPGGRGRGRGRGSRGGYSGSS 360
             LGSEKDKRKEIADKEER KKS SINEFL+P +GERHY PGGRGRGRGRGSRGGY GSS
Sbjct: 301 --LGSEKDKRKEIADKEERTKKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYGGSS 359

Query: 361 VSNVAAPSIEDPGQFPTLGAK 381
           +SNVAAPSIEDPGQFPTLGAK
Sbjct: 361 ISNVAAPSIEDPGQFPTLGAK 359

[Close]

BLAST of Spg034461 vs. NCBI nr
Match: XP_022933029.1 (RGG repeats nuclear RNA binding protein A-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 575.9 bits (1483), Expect = 2.6e-160
Identity = 322/381 (84.51%), Postives = 337/381 (88.45%), Query Frame = 0


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAPVTAPPPKKGPAQTKPAVSAAQQNKPASLPSK 60
           MATVNPFDLLGDDDAEDPSQLIAAKQVA VTAPPPKKG AQTKP VS +QQNKPASLPSK
Sbjct: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPPKKGSAQTKPVVSPSQQNKPASLPSK 60

Query: 61  PLPPAQAVREARNEGSRGGRGSGR-GGRGYGRGREGGGFNRDSANNESSGAPEDGETGKT 120
           PLPP+QAVREARNEGSRGGRGSGR GGRGYGRGREGGGFNRD AN+E++ APEDGE GKT
Sbjct: 61  PLPPSQAVREARNEGSRGGRGSGRGGGRGYGRGREGGGFNRDFANSENTSAPEDGEAGKT 120

Query: 121 TERRGYTGPPRGRGGRRGGFNNGEAADGERPRRVFERHSGTGRGNEFKREGSGRGNWGRS 180
           TERRGY G PRGRGGRRGGFNNGEA DGERPRRVFERHSGTGRGNE KREG+GRGNWGR 
Sbjct: 121 TERRGY-GGPRGRGGRRGGFNNGEAGDGERPRRVFERHSGTGRGNENKREGAGRGNWGRP 180

Query: 181 TDELAEVAEEAVNETEKNVGDEKPVQEDDTAGVNAENPAKEPEEAEPEDKEMTLEEYEKL 240
            DE AEVAEEAVNE EKNVGDEKPVQE+DT+GVN+ENPAKEPEE EPEDKEMTLEEYEKL
Sbjct: 181 ADEFAEVAEEAVNEPEKNVGDEKPVQEEDTSGVNSENPAKEPEETEPEDKEMTLEEYEKL 240

Query: 241 LEEKRKALLALKAEERKVDPKEFASMQQLSSKKDNNDIFIKLVHLHNPLTESIIYALMTL 300
           LE+KRKAL+ALK EERKVDPKEFASMQQLSSKK+NNDIFIK                   
Sbjct: 241 LEDKRKALMALKTEERKVDPKEFASMQQLSSKKENNDIFIK------------------- 300

Query: 301 GLLGSEKDKRKEIADKEERAKKSFSINEFLKPVDGERHYVPGGRGRGRGRGSRGGYSGSS 360
             LGSEKDKRKEIADKEER KKS SINEFL+P +GERHY PGGRGRGRGRGSRGGY GSS
Sbjct: 301 --LGSEKDKRKEIADKEERTKKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYGGSS 359

Query: 361 VSNVAAPSIEDPGQFPTLGAK 381
           +SNVAAPSIEDPGQFPTLGAK
Sbjct: 361 ISNVAAPSIEDPGQFPTLGAK 359

[Close]

BLAST of Spg034461 vs. NCBI nr
Match: XP_022933028.1 (RGG repeats nuclear RNA binding protein A-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 575.5 bits (1482), Expect = 3.4e-160
Identity = 322/381 (84.51%), Postives = 337/381 (88.45%), Query Frame = 0


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAPVTAPPPKKGPAQTKPAVSAAQQNKPASLPSK 60
           MATVNPFDLLGDDDAEDPSQLIAAKQVA VTAPPPKKG AQTKP VS +QQNKPASLPSK
Sbjct: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPPKKGSAQTKPVVSPSQQNKPASLPSK 60

Query: 61  PLPPAQAVREARNEGSRGGRGSGR-GGRGYGRGREGGGFNRDSANNESSGAPEDGETGKT 120
           PLPP+QAVREARNEGSRGGRGSGR GGRGYGRGREGGGFNRD AN+E++ APEDGE GKT
Sbjct: 61  PLPPSQAVREARNEGSRGGRGSGRGGGRGYGRGREGGGFNRDFANSENTSAPEDGEAGKT 120

Query: 121 TERRGYTGPPRGRGGRRGGFNNGEAADGERPRRVFERHSGTGRGNEFKREGSGRGNWGRS 180
           TERRGY G PRGRGGRRGGFNNGEA DGERPRRVFERHSGTGRGNE KREG+GRGNWGR 
Sbjct: 121 TERRGY-GGPRGRGGRRGGFNNGEAGDGERPRRVFERHSGTGRGNENKREGAGRGNWGRP 180

Query: 181 TDELAEVAEEAVNETEKNVGDEKPVQEDDTAGVNAENPAKEPEEAEPEDKEMTLEEYEKL 240
            DE AEVAEEAVNE EKNVGDEKPVQE+DT+GVN+ENPAKEPEE EPEDKEMTLEEYEKL
Sbjct: 181 ADEFAEVAEEAVNEPEKNVGDEKPVQEEDTSGVNSENPAKEPEETEPEDKEMTLEEYEKL 240

Query: 241 LEEKRKALLALKAEERKVDPKEFASMQQLSSKKDNNDIFIKLVHLHNPLTESIIYALMTL 300
           LE+KRKAL+ALK EERKVDPKEFASMQQLSSKK+NNDIFIK                   
Sbjct: 241 LEDKRKALMALKTEERKVDPKEFASMQQLSSKKENNDIFIK------------------- 300

Query: 301 GLLGSEKDKRKEIADKEERAKKSFSINEFLKPVDGERHYVPGGRGRGRGRGSRGGYSGSS 360
            L GSEKDKRKEIADKEER KKS SINEFL+P +GERHY PGGRGRGRGRGSRGGY GSS
Sbjct: 301 -LQGSEKDKRKEIADKEERTKKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYGGSS 360

Query: 361 VSNVAAPSIEDPGQFPTLGAK 381
           +SNVAAPSIEDPGQFPTLGAK
Sbjct: 361 ISNVAAPSIEDPGQFPTLGAK 360

[Close]

BLAST of Spg034461 vs. NCBI nr
Match: KAG6575278.1 (RGG repeats nuclear RNA binding protein B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 571.6 bits (1472), Expect = 5.0e-159
Identity = 319/378 (84.39%), Postives = 334/378 (88.36%), Query Frame = 0


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAPVTAPPPKKGPAQTKPAVSAAQQNKPASLPSK 60
           MATVNPFDLLGDDDAEDPSQLIAAKQVA VTAPPPKKG AQTKP VS +QQNKPASLPSK
Sbjct: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPPKKGSAQTKPVVSPSQQNKPASLPSK 60

Query: 61  PLPPAQAVREARNEGSRGGRGSGR-GGRGYGRGREGGGFNRDSANNESSGAPEDGETGKT 120
           PLPP+QAVREARNEGSRGGRGSGR GGRGYGRGREGGGFNRD AN+E++ APEDGE GKT
Sbjct: 61  PLPPSQAVREARNEGSRGGRGSGRGGGRGYGRGREGGGFNRDFANSENTSAPEDGEAGKT 120

Query: 121 TERRGYTGPPRGRGGRRGGFNNGEAADGERPRRVFERHSGTGRGNEFKREGSGRGNWGRS 180
           TERRGY G PRGRGGRRGGFNNGEA DGERPRRVFERHSGTGRGNE+KREG+GRGNWGR 
Sbjct: 121 TERRGY-GGPRGRGGRRGGFNNGEAGDGERPRRVFERHSGTGRGNEYKREGAGRGNWGRP 180

Query: 181 TDELAEVAEEAVNETEKNVGDEKPVQEDDTAGVNAENPAKEPEEAEPEDKEMTLEEYEKL 240
            DE AEVAEEAVNE EKNVGDEKPVQE+DT+GVN ENPAKEPEE EPEDKEMTLEEYEKL
Sbjct: 181 ADEFAEVAEEAVNEPEKNVGDEKPVQEEDTSGVNRENPAKEPEETEPEDKEMTLEEYEKL 240

Query: 241 LEEKRKALLALKAEERKVDPKEFASMQQLSSKKDNNDIFIKLVHLHNPLTESIIYALMTL 300
           LE+KRKAL+ALK EERKVDPKEFASMQQLSSKK+NNDIFIK                   
Sbjct: 241 LEDKRKALMALKTEERKVDPKEFASMQQLSSKKENNDIFIK------------------- 300

Query: 301 GLLGSEKDKRKEIADKEERAKKSFSINEFLKPVDGERHYVPGGRGRGRGRGSRGGYSGSS 360
             LGSEKDKRKEIADKEER KKS SINEFL+P +GERHY PGGRGRGRGRGSRGGY GSS
Sbjct: 301 --LGSEKDKRKEIADKEERTKKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYGGSS 356

Query: 361 VSNVAAPSIEDPGQFPTL 378
           +SNVAAPSIEDPGQFPTL
Sbjct: 361 ISNVAAPSIEDPGQFPTL 356

[Close]

BLAST of Spg034461 vs. NCBI nr
Match: XP_023520985.1 (RGG repeats nuclear RNA binding protein A-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 569.3 bits (1466), Expect = 2.5e-158
Identity = 317/381 (83.20%), Postives = 335/381 (87.93%), Query Frame = 0


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAPVTAPPPKKGPAQTKPAVSAAQQNKPASLPSK 60
           MATVNPFDLLGDDDAEDPSQLIAAKQVA VTAPPPKKG AQTKP VS +QQNKPASLPS 
Sbjct: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPPKKGSAQTKPVVSPSQQNKPASLPSN 60

Query: 61  PLPPAQAVREARNEGSRGGRGSGR-GGRGYGRGREGGGFNRDSANNESSGAPEDGETGKT 120
           PLPP+QAVRE+RNEGSRGGRG+GR GGRGYGRGREGGGFNRD AN++++ APEDGE GKT
Sbjct: 61  PLPPSQAVRESRNEGSRGGRGNGRGGGRGYGRGREGGGFNRDFANSDNTSAPEDGEAGKT 120

Query: 121 TERRGYTGPPRGRGGRRGGFNNGEAADGERPRRVFERHSGTGRGNEFKREGSGRGNWGRS 180
           TERRGY G PRGRGGRRGGFNNGEAADGERPRRVFERHSGTGRGN +KREG+GRGNWGR 
Sbjct: 121 TERRGY-GGPRGRGGRRGGFNNGEAADGERPRRVFERHSGTGRGNGYKREGAGRGNWGRP 180

Query: 181 TDELAEVAEEAVNETEKNVGDEKPVQEDDTAGVNAENPAKEPEEAEPEDKEMTLEEYEKL 240
            DE AEV EEAVNE EKNVGDEKPVQE+DT+GVN ENPAKEPEE EPEDKEMTLEEYEKL
Sbjct: 181 ADEFAEVPEEAVNEPEKNVGDEKPVQEEDTSGVNTENPAKEPEETEPEDKEMTLEEYEKL 240

Query: 241 LEEKRKALLALKAEERKVDPKEFASMQQLSSKKDNNDIFIKLVHLHNPLTESIIYALMTL 300
           LE+KRKAL+ALK EERKVDPKEFASMQQLSSKK+NNDIFIK                   
Sbjct: 241 LEDKRKALMALKTEERKVDPKEFASMQQLSSKKENNDIFIK------------------- 300

Query: 301 GLLGSEKDKRKEIADKEERAKKSFSINEFLKPVDGERHYVPGGRGRGRGRGSRGGYSGSS 360
             LGSEKDKRKEIADKEER KKS SINEFL+P +GERHY PGGRGRGRGRGSRGGY GSS
Sbjct: 301 --LGSEKDKRKEIADKEERTKKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYGGSS 359

Query: 361 VSNVAAPSIEDPGQFPTLGAK 381
           +SNVAAPSIEDPGQFPTLGAK
Sbjct: 361 ISNVAAPSIEDPGQFPTLGAK 359

[Close]

BLAST of Spg034461 vs. ExPASy Swiss-Prot
Match: O23523 (RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana OX=3702 GN=RGGA PE=1 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 6.0e-75
Identity = 212/398 (53.27%), Postives = 249/398 (62.56%), Query Frame = 0


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAPVTAPPPKKGPAQTKPAVSAAQQNKPASLPSK 60
           MAT+NPFDLL DDDAEDPSQL  A +    +    K G   + PA SA +      LPSK
Sbjct: 1   MATLNPFDLL-DDDAEDPSQLAVAIEKIDKS---KKSGQVSSLPAKSAPK------LPSK 60

Query: 61  PLPPAQAVREARNEGSRGGRGSGRGGRGYGRGREGGGFNRDSANNESSGA----PEDGET 120
           PLPPAQAVREAR++  RGG G G    G+ RGR  GG+NRD  NN  SG       +G+ 
Sbjct: 61  PLPPAQAVREARSDAPRGGGGRG----GFNRGR--GGYNRDDGNNGYSGGYTKPSGEGDV 120

Query: 121 GKTT-ERRGYTGPPRGR---------GGRRGGFNNGEAADGERPRRVFERHSGTGRGNEF 180
            K++ ERRG  G PRG          GGRRGGF+N E  DGERPRR FER SGTGRG++F
Sbjct: 121 SKSSYERRGGGGAPRGSFRGEGGGPGGGRRGGFSN-EGGDGERPRRAFERRSGTGRGSDF 180

Query: 181 KREGSGRGNWGRSTDELAEVAEEAVN-ETEKNVGDEKPVQEDDTAGVNAENPAKEPEEAE 240
           KR+GSGRGNWG   +E+A   E     ETEK+VG EKP  +D  A  N E+     EE E
Sbjct: 181 KRDGSGRGNWGTPGEEIAAETEAVAGVETEKDVG-EKPAVDDVAADANKEDTV--VEEKE 240

Query: 241 PEDKEMTLEEYEKLLEEKRKALLALKAEERKVDPKEFASMQQLSSKKDNNDIFIKLVHLH 300
           PEDKEMTL+EYEK+LEEK+KAL +L   ERKVD K F SMQQLS+KK N++IFIK     
Sbjct: 241 PEDKEMTLDEYEKILEEKKKALQSLTTSERKVDTKVFESMQQLSNKKSNDEIFIK----- 300

Query: 301 NPLTESIIYALMTLGLLGSEKDKRKEIADKEERAKKSFSINEFLKPVDGERHYVPGGRGR 360
                           LGS+KDKRK+  DKEE+AKK+ SINEFLKP +G  +Y  G  GR
Sbjct: 301 ----------------LGSDKDKRKD--DKEEKAKKAVSINEFLKPAEGGNYYRGGRGGR 355

Query: 361 GRGRGSRGGYS---GSSVSNVAAPSIEDPGQFPTLGAK 381
           GRG   RGG S        N AAP+I D  QFP+LG K
Sbjct: 361 GRGGRGRGGVSSGESGGYRNEAAPAIGDAAQFPSLGGK 355

[Close]

BLAST of Spg034461 vs. ExPASy Swiss-Prot
Match: Q9SQ56 (RGG repeats nuclear RNA binding protein A (Fragment) OS=Nicotiana tabacum OX=4097 GN=RggA PE=2 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 4.3e-65
Identity = 180/325 (55.38%), Postives = 218/325 (67.08%), Query Frame = 0


Query: 75  GSRGGRGSGRGGRGYGRGREGGGFNRDSANNESS-----------GAPEDGETGKTTERR 134
           G RGG   G  GRG GRGR   GFN++SA++E++              EDGE+GK +ERR
Sbjct: 3   GGRGGPRGGGRGRGPGRGR---GFNQESADDENAFGSNNGFSGRYRVQEDGESGKLSERR 62

Query: 135 GYTGPPRG--RGGRRGGFNNGEAA--DGERPRRVFERHSGTGRGNEF-KREGSGRGNWGR 194
           G  G PRG   GGRRGGFNNG+AA  +GERPRRVF+R SGTGRGNE+ KREGSGRGNWG 
Sbjct: 63  GGYGGPRGGFHGGRRGGFNNGDAAEGEGERPRRVFDRRSGTGRGNEYIKREGSGRGNWGT 122

Query: 195 STDELAEVAEEAVNETEKNVGDEKPVQEDDTAGVNAENPAKEPEEAEPEDKEMTLEEYEK 254
             D++A+  E  VN+ EK V  EK   +++    N ++ A EPEE EPE+KEMTLEEYEK
Sbjct: 123 PADDIAQETEVPVNDGEKIVEAEKEAGQEEAEDTNKDSTAAEPEEKEPEEKEMTLEEYEK 182

Query: 255 LLEEKRKALLALKAEERKVD-PKEFASMQQLSSKKDNNDIFIKLVHLHNPLTESIIYALM 314
           L+EEKRKALLALK EERKV+  KE  SMQ LS+KK++++IFIK                 
Sbjct: 183 LMEEKRKALLALKPEERKVNLDKELESMQLLSNKKNDDEIFIK----------------- 242

Query: 315 TLGLLGSEKDKRKEIADKEERAKKSFSINEFLKPVDGERHYVPGGRGRGRGRGSRGGYSG 374
               LGSEK+KRKE     E+A+K+ SINEFLKP +GE +   GGRGRG GRG RGG+ G
Sbjct: 243 ----LGSEKEKRKEAV---EKARKTQSINEFLKPAEGENYSRRGGRGRGPGRG-RGGFGG 299

Query: 375 SSVSN--VAAPSIEDPGQFPTLGAK 381
               N   +APSIED GQFP+L AK
Sbjct: 303 GVGGNKSFSAPSIEDVGQFPSLVAK 299

[Close]

BLAST of Spg034461 vs. ExPASy Swiss-Prot
Match: O23593 (RGG repeats nuclear RNA binding protein B OS=Arabidopsis thaliana OX=3702 GN=RGGB PE=1 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 5.9e-62
Identity = 191/404 (47.28%), Postives = 235/404 (58.17%), Query Frame = 0


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAPVTAPPPKKGPAQTKPAVSAAQQNKPASLPSK 60
           MA+VNPFDLL DDDAEDPSQ++A+K +  V        P QT          K   +P+K
Sbjct: 1   MASVNPFDLL-DDDAEDPSQIVASKPLKVV-------APVQTA---------KSGKMPTK 60

Query: 61  PLPPAQAVREARNEGSRGGRGSGRGGRGYGRGREGGGFNRDSANNESSGAPEDGETGKTT 120
           P PP+QAVREARN    GGRG+GRGG  YGRG  GG  NRDS NN+   A E+G  G   
Sbjct: 61  PPPPSQAVREARN-APGGGRGAGRGG-SYGRGGRGGN-NRDSRNNDGP-ANENGYGGGYR 120

Query: 121 ERRGYTGPPRG------RGGRRGGFNN-GEAADGERPRRVFERHSGTGRGNEFKREGSGR 180
                 G  RG      RG RRG ++N G++ D ERPR+ ++RHS T  GNE KR+G+GR
Sbjct: 121 RSEEGDGARRGGPVGGYRGDRRGSYSNGGDSGDSERPRKNYDRHSRTAYGNEDKRDGAGR 180

Query: 181 GNWGRSTDELAEVAEEAVNETEKNVGDEKPVQEDDTAGVNAENPAKEPEEAEPEDKEMTL 240
            NWG + D++  V EE+    +KN+  EK   E +      E PA++ EE +PEDKEMTL
Sbjct: 181 ANWGTTQDDITPVTEESTAVVDKNLTVEKQDGEGEATDAKNETPAEKAEE-KPEDKEMTL 240

Query: 241 EEYEKLLEEKRKALLALKAEERKVDPKEFASMQQLSSKKDNND-IFIKLVHLHNPLTESI 300
           EEYEK+LEEK+KAL A K EERKVD K F +MQQLSSKK NND +FIK            
Sbjct: 241 EEYEKVLEEKKKALQATKVEERKVDTKAFEAMQQLSSKKSNNDEVFIK------------ 300

Query: 301 IYALMTLGLLGSEKDKRKEIADKEERAKKSFSINEFLKPVDGERHYVP-----GGR---- 360
                    LG+EKDKR  I ++EE+ +KS SINEFLKP DG+ +Y P     GGR    
Sbjct: 301 ---------LGTEKDKR--ITEREEKTRKSLSINEFLKPADGKSYYRPRGGYQGGREGRG 359

Query: 361 ---------GRGRGRGSRGGYSGSSVSNVAAPSIEDPGQFPTLG 379
                    GR    G R    G + +    P+I D  QFPTLG
Sbjct: 361 PREGNQRDGGRNLREGGRNQRDGGAAAQAPTPAIGDSAQFPTLG 359

[Close]

BLAST of Spg034461 vs. ExPASy Swiss-Prot
Match: Q9LVT8 (RGG repeats nuclear RNA binding protein C OS=Arabidopsis thaliana OX=3702 GN=RGGC PE=1 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 4.2e-60
Identity = 187/396 (47.22%), Postives = 227/396 (57.32%), Query Frame = 0


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAPVTAPPPKKGPAQTKPAVSAAQQNKPASLPSK 60
           MA++NPFDLLG DDAEDPSQL  A                + + A +A Q  K A  P+K
Sbjct: 1   MASLNPFDLLG-DDAEDPSQLAVALS-------------QKVEKAAAAVQPPKAAKFPTK 60

Query: 61  PLPPAQAVREARNEGSRGGRGSGRGGRGYGRGREGGGFNRDSANNE--------SSGAPE 120
           P PP+QAVRE+RN   +GGRG   G  G+ RGR  GG+NRD+ NN+        S G   
Sbjct: 61  PAPPSQAVRESRN-APQGGRGGTGGRGGFSRGRGNGGYNRDNRNNDAPGNENGFSGGYRR 120

Query: 121 DGETGKTTERRGYTGPPRGRGG----RRGGFNNGEAADGERPRRVFERHSGTGRGNEFKR 180
             E      R G  G  R  GG    RRGG  NGE+ D ERP R ++RHS TG G   KR
Sbjct: 121 PSEDADGASRGGSVGGYRVGGGREGPRRGGVANGESGDVERPPRNYDRHSRTGHGTGMKR 180

Query: 181 EGSGRGNWGRSTDELAEVAEEAVNETEKNVGDEKPVQEDDTAGVNAENPAKEPEEAEPED 240
            G GRGNWG + D++   +EE   E EK+   EK   ED+T     E  A+E  + E E+
Sbjct: 181 NGGGRGNWGTTEDDIPPTSEEPTTEVEKSPVAEKQGGEDETPEAKKELTAEEKAQKEAEE 240

Query: 241 ---KEMTLEEYEKLLEEKRKALLALKAEERKVDPKEFASMQQLSSKKD-NNDIFIKLVHL 300
              +EMTLEEYEK+LEEK+KAL A K EERKVD K F SMQQLS+KK+ + +IFIK    
Sbjct: 241 AEAREMTLEEYEKILEEKKKALQATKVEERKVDTKVFESMQQLSNKKNTDEEIFIK---- 300

Query: 301 HNPLTESIIYALMTLGLLGSEKDKRKEIADKEERAKKSFSINEFLKPVDGERHYVPGGRG 360
                            LGS+K+KRK   D  E+AKKS SINEFLKP DG+R+   GG  
Sbjct: 301 -----------------LGSDKEKRK---DATEKAKKSLSINEFLKPADGKRYNGRGGGS 357

Query: 361 RGR-GRGSRG-GYSGSSVSNVAAPSIEDPGQFPTLG 379
           RGR GRG RG G +       AAP+I D  QFP+LG
Sbjct: 361 RGRGGRGGRGEGGNQRYAKEAAAPAIGDTAQFPSLG 357

[Close]

BLAST of Spg034461 vs. ExPASy TrEMBL
Match: A0A6J1EYL1 (RGG repeats nuclear RNA binding protein A-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111439720 PE=4 SV=1)

HSP 1 Score: 575.9 bits (1483), Expect = 1.3e-160
Identity = 322/381 (84.51%), Postives = 337/381 (88.45%), Query Frame = 0


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAPVTAPPPKKGPAQTKPAVSAAQQNKPASLPSK 60
           MATVNPFDLLGDDDAEDPSQLIAAKQVA VTAPPPKKG AQTKP VS +QQNKPASLPSK
Sbjct: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPPKKGSAQTKPVVSPSQQNKPASLPSK 60

Query: 61  PLPPAQAVREARNEGSRGGRGSGR-GGRGYGRGREGGGFNRDSANNESSGAPEDGETGKT 120
           PLPP+QAVREARNEGSRGGRGSGR GGRGYGRGREGGGFNRD AN+E++ APEDGE GKT
Sbjct: 61  PLPPSQAVREARNEGSRGGRGSGRGGGRGYGRGREGGGFNRDFANSENTSAPEDGEAGKT 120

Query: 121 TERRGYTGPPRGRGGRRGGFNNGEAADGERPRRVFERHSGTGRGNEFKREGSGRGNWGRS 180
           TERRGY G PRGRGGRRGGFNNGEA DGERPRRVFERHSGTGRGNE KREG+GRGNWGR 
Sbjct: 121 TERRGY-GGPRGRGGRRGGFNNGEAGDGERPRRVFERHSGTGRGNENKREGAGRGNWGRP 180

Query: 181 TDELAEVAEEAVNETEKNVGDEKPVQEDDTAGVNAENPAKEPEEAEPEDKEMTLEEYEKL 240
            DE AEVAEEAVNE EKNVGDEKPVQE+DT+GVN+ENPAKEPEE EPEDKEMTLEEYEKL
Sbjct: 181 ADEFAEVAEEAVNEPEKNVGDEKPVQEEDTSGVNSENPAKEPEETEPEDKEMTLEEYEKL 240

Query: 241 LEEKRKALLALKAEERKVDPKEFASMQQLSSKKDNNDIFIKLVHLHNPLTESIIYALMTL 300
           LE+KRKAL+ALK EERKVDPKEFASMQQLSSKK+NNDIFIK                   
Sbjct: 241 LEDKRKALMALKTEERKVDPKEFASMQQLSSKKENNDIFIK------------------- 300

Query: 301 GLLGSEKDKRKEIADKEERAKKSFSINEFLKPVDGERHYVPGGRGRGRGRGSRGGYSGSS 360
             LGSEKDKRKEIADKEER KKS SINEFL+P +GERHY PGGRGRGRGRGSRGGY GSS
Sbjct: 301 --LGSEKDKRKEIADKEERTKKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYGGSS 359

Query: 361 VSNVAAPSIEDPGQFPTLGAK 381
           +SNVAAPSIEDPGQFPTLGAK
Sbjct: 361 ISNVAAPSIEDPGQFPTLGAK 359

[Close]

BLAST of Spg034461 vs. ExPASy TrEMBL
Match: A0A6J1F3H7 (RGG repeats nuclear RNA binding protein A-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439720 PE=4 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 1.7e-160
Identity = 322/381 (84.51%), Postives = 337/381 (88.45%), Query Frame = 0


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAPVTAPPPKKGPAQTKPAVSAAQQNKPASLPSK 60
           MATVNPFDLLGDDDAEDPSQLIAAKQVA VTAPPPKKG AQTKP VS +QQNKPASLPSK
Sbjct: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPPKKGSAQTKPVVSPSQQNKPASLPSK 60

Query: 61  PLPPAQAVREARNEGSRGGRGSGR-GGRGYGRGREGGGFNRDSANNESSGAPEDGETGKT 120
           PLPP+QAVREARNEGSRGGRGSGR GGRGYGRGREGGGFNRD AN+E++ APEDGE GKT
Sbjct: 61  PLPPSQAVREARNEGSRGGRGSGRGGGRGYGRGREGGGFNRDFANSENTSAPEDGEAGKT 120

Query: 121 TERRGYTGPPRGRGGRRGGFNNGEAADGERPRRVFERHSGTGRGNEFKREGSGRGNWGRS 180
           TERRGY G PRGRGGRRGGFNNGEA DGERPRRVFERHSGTGRGNE KREG+GRGNWGR 
Sbjct: 121 TERRGY-GGPRGRGGRRGGFNNGEAGDGERPRRVFERHSGTGRGNENKREGAGRGNWGRP 180

Query: 181 TDELAEVAEEAVNETEKNVGDEKPVQEDDTAGVNAENPAKEPEEAEPEDKEMTLEEYEKL 240
            DE AEVAEEAVNE EKNVGDEKPVQE+DT+GVN+ENPAKEPEE EPEDKEMTLEEYEKL
Sbjct: 181 ADEFAEVAEEAVNEPEKNVGDEKPVQEEDTSGVNSENPAKEPEETEPEDKEMTLEEYEKL 240

Query: 241 LEEKRKALLALKAEERKVDPKEFASMQQLSSKKDNNDIFIKLVHLHNPLTESIIYALMTL 300
           LE+KRKAL+ALK EERKVDPKEFASMQQLSSKK+NNDIFIK                   
Sbjct: 241 LEDKRKALMALKTEERKVDPKEFASMQQLSSKKENNDIFIK------------------- 300

Query: 301 GLLGSEKDKRKEIADKEERAKKSFSINEFLKPVDGERHYVPGGRGRGRGRGSRGGYSGSS 360
            L GSEKDKRKEIADKEER KKS SINEFL+P +GERHY PGGRGRGRGRGSRGGY GSS
Sbjct: 301 -LQGSEKDKRKEIADKEERTKKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYGGSS 360

Query: 361 VSNVAAPSIEDPGQFPTLGAK 381
           +SNVAAPSIEDPGQFPTLGAK
Sbjct: 361 ISNVAAPSIEDPGQFPTLGAK 360

[Close]

BLAST of Spg034461 vs. ExPASy TrEMBL
Match: A0A6J1I9W0 (RGG repeats nuclear RNA binding protein A-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111472481 PE=4 SV=1)

HSP 1 Score: 562.8 bits (1449), Expect = 1.1e-156
Identity = 316/381 (82.94%), Postives = 332/381 (87.14%), Query Frame = 0


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAPVTAPPPKKGPAQTKPAVSAAQQNKPASLPSK 60
           MATVNPFDLLGDDDAEDPSQLIAAKQVA VTAPPPK+G AQTKP V A+QQNKPASLPSK
Sbjct: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPPKEGSAQTKPVVPASQQNKPASLPSK 60

Query: 61  PLPPAQAVREARNEGSRGGRGSGR-GGRGYGRGREGGGFNRDSANNESSGAPEDGETGKT 120
           PLPP+QAVREARNEG RGGRGSGR GGRGYGRGREGGGFNRD AN+E++ APEDGE GKT
Sbjct: 61  PLPPSQAVREARNEGIRGGRGSGRGGGRGYGRGREGGGFNRDFANSENTSAPEDGEAGKT 120

Query: 121 TERRGYTGPPRGRGGRRGGFNNGEAADGERPRRVFERHSGTGRGNEFKREGSGRGNWGRS 180
           TERRGY G PRGRGGRRGGFNNGE  DGERPRRVFERHSGTGRGNE+KREG+GRGNWGR 
Sbjct: 121 TERRGY-GGPRGRGGRRGGFNNGEVGDGERPRRVFERHSGTGRGNEYKREGAGRGNWGRP 180

Query: 181 TDELAEVAEEAVNETEKNVGDEKPVQEDDTAGVNAENPAKEPEEAEPEDKEMTLEEYEKL 240
            DE AEVAEEAVNE EKNVGDEKPVQE+DT+GVN ENPAKEPEE EPEDKEMTLEEYEKL
Sbjct: 181 ADEFAEVAEEAVNEPEKNVGDEKPVQEEDTSGVNTENPAKEPEETEPEDKEMTLEEYEKL 240

Query: 241 LEEKRKALLALKAEERKVDPKEFASMQQLSSKKDNNDIFIKLVHLHNPLTESIIYALMTL 300
           LE+KRKAL+ALK EERKVDPKEFASMQQLSSKK+NNDIFIK                   
Sbjct: 241 LEDKRKALMALKTEERKVDPKEFASMQQLSSKKENNDIFIK------------------- 300

Query: 301 GLLGSEKDKRKEIADKEERAKKSFSINEFLKPVDGERHYVPGGRGRGRGRGSRGGYSGSS 360
             LGSEKDKRKEIADKEER KKS SINEFL+P + ER Y PGGR RGRGRGSRGGY GSS
Sbjct: 301 --LGSEKDKRKEIADKEERTKKSLSINEFLRPAERERQYTPGGRVRGRGRGSRGGYGGSS 359

Query: 361 VSNVAAPSIEDPGQFPTLGAK 381
           +SNVAAPSIEDPGQFPTLGAK
Sbjct: 361 ISNVAAPSIEDPGQFPTLGAK 359

[Close]

BLAST of Spg034461 vs. ExPASy TrEMBL
Match: A0A6J1ICH9 (RGG repeats nuclear RNA binding protein A-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472481 PE=4 SV=1)

HSP 1 Score: 562.4 bits (1448), Expect = 1.5e-156
Identity = 316/381 (82.94%), Postives = 332/381 (87.14%), Query Frame = 0


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAPVTAPPPKKGPAQTKPAVSAAQQNKPASLPSK 60
           MATVNPFDLLGDDDAEDPSQLIAAKQVA VTAPPPK+G AQTKP V A+QQNKPASLPSK
Sbjct: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAAVTAPPPKEGSAQTKPVVPASQQNKPASLPSK 60

Query: 61  PLPPAQAVREARNEGSRGGRGSGR-GGRGYGRGREGGGFNRDSANNESSGAPEDGETGKT 120
           PLPP+QAVREARNEG RGGRGSGR GGRGYGRGREGGGFNRD AN+E++ APEDGE GKT
Sbjct: 61  PLPPSQAVREARNEGIRGGRGSGRGGGRGYGRGREGGGFNRDFANSENTSAPEDGEAGKT 120

Query: 121 TERRGYTGPPRGRGGRRGGFNNGEAADGERPRRVFERHSGTGRGNEFKREGSGRGNWGRS 180
           TERRGY G PRGRGGRRGGFNNGE  DGERPRRVFERHSGTGRGNE+KREG+GRGNWGR 
Sbjct: 121 TERRGY-GGPRGRGGRRGGFNNGEVGDGERPRRVFERHSGTGRGNEYKREGAGRGNWGRP 180

Query: 181 TDELAEVAEEAVNETEKNVGDEKPVQEDDTAGVNAENPAKEPEEAEPEDKEMTLEEYEKL 240
            DE AEVAEEAVNE EKNVGDEKPVQE+DT+GVN ENPAKEPEE EPEDKEMTLEEYEKL
Sbjct: 181 ADEFAEVAEEAVNEPEKNVGDEKPVQEEDTSGVNTENPAKEPEETEPEDKEMTLEEYEKL 240

Query: 241 LEEKRKALLALKAEERKVDPKEFASMQQLSSKKDNNDIFIKLVHLHNPLTESIIYALMTL 300
           LE+KRKAL+ALK EERKVDPKEFASMQQLSSKK+NNDIFIK                   
Sbjct: 241 LEDKRKALMALKTEERKVDPKEFASMQQLSSKKENNDIFIK------------------- 300

Query: 301 GLLGSEKDKRKEIADKEERAKKSFSINEFLKPVDGERHYVPGGRGRGRGRGSRGGYSGSS 360
            L GSEKDKRKEIADKEER KKS SINEFL+P + ER Y PGGR RGRGRGSRGGY GSS
Sbjct: 301 -LQGSEKDKRKEIADKEERTKKSLSINEFLRPAERERQYTPGGRVRGRGRGSRGGYGGSS 360

Query: 361 VSNVAAPSIEDPGQFPTLGAK 381
           +SNVAAPSIEDPGQFPTLGAK
Sbjct: 361 ISNVAAPSIEDPGQFPTLGAK 360

[Close]

BLAST of Spg034461 vs. ExPASy TrEMBL
Match: A0A1S3CBH1 (H/ACA ribonucleoprotein complex subunit 1-like OS=Cucumis melo OX=3656 GN=LOC103498821 PE=4 SV=1)

HSP 1 Score: 555.1 bits (1429), Expect = 2.3e-154
Identity = 314/383 (81.98%), Postives = 330/383 (86.16%), Query Frame = 0


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAPVTAPPPKKGPAQTKPAVSAAQQNKPASLPSK 60
           MAT+NPFDLLGDDDAEDPSQLIAAK  A  TAP  KKGPAQTKP  S AQQNKPASLPSK
Sbjct: 1   MATLNPFDLLGDDDAEDPSQLIAAKVAAVATAPLSKKGPAQTKPLPSGAQQNKPASLPSK 60

Query: 61  PLPPAQAVREARNEGSRGGRGSGRG---GRGYGRGREGGGFNRDSANNESSGAPEDGETG 120
           PLPPAQAVRE+RNEGSRGGRGSGRG   G GYGRGREGGGFNRDSAN+E+  APEDG  G
Sbjct: 61  PLPPAQAVRESRNEGSRGGRGSGRGGGRGYGYGRGREGGGFNRDSANSENINAPEDGVGG 120

Query: 121 KTTERRGYTGPPRGRGGRRGGFNNGEAADGERPRRVFERHSGTGRGNEFKREGSGRGNWG 180
           KTTERRGY G PRGRGGRRGGFN+GE A+GERPRR FERHSGTGRGNEFKREGSGRGNWG
Sbjct: 121 KTTERRGY-GGPRGRGGRRGGFNDGENAEGERPRRAFERHSGTGRGNEFKREGSGRGNWG 180

Query: 181 RSTDELAEVAEEAVNETEKNVGDEKPVQEDDTAGVNAENPAKEPEEAEPEDKEMTLEEYE 240
           RSTDE AEVAEE VNETEKNVGDEKP+QE+DT+G N ++PAKEPEE EPEDKEMTLEEYE
Sbjct: 181 RSTDEFAEVAEETVNETEKNVGDEKPIQENDTSGANTDDPAKEPEETEPEDKEMTLEEYE 240

Query: 241 KLLEEKRKALLALKAEERKVDPKEFASMQQLSSKKDNNDIFIKLVHLHNPLTESIIYALM 300
           KLLE+KRK+LLALK EERKVDPKEFASMQQLSSKKDNNDIFIK                 
Sbjct: 241 KLLEDKRKSLLALKTEERKVDPKEFASMQQLSSKKDNNDIFIK----------------- 300

Query: 301 TLGLLGSEKDKRKEIADKEERAKKSFSINEFLKPVDGERHYVPGGRGRGRGRGSRGGYSG 360
               LGSEKDKRKEIADKEER KKS SINEFL+P +GERHY PGGRGRGRGRGSRGGYSG
Sbjct: 301 ----LGSEKDKRKEIADKEERTKKSLSINEFLRPAEGERHYTPGGRGRGRGRGSRGGYSG 360

Query: 361 SSVSNVAAPSIEDPGQFPTLGAK 381
           SS+SNVAAPSIEDPGQFP LGAK
Sbjct: 361 SSMSNVAAPSIEDPGQFPILGAK 361

[Close]

BLAST of Spg034461 vs. TAIR 10
Match: AT4G16830.1 (Hyaluronan / mRNA binding family )

HSP 1 Score: 282.7 bits (722), Expect = 4.3e-76
Identity = 212/398 (53.27%), Postives = 249/398 (62.56%), Query Frame = 0


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAPVTAPPPKKGPAQTKPAVSAAQQNKPASLPSK 60
           MAT+NPFDLL DDDAEDPSQL  A +    +    K G   + PA SA +      LPSK
Sbjct: 1   MATLNPFDLL-DDDAEDPSQLAVAIEKIDKS---KKSGQVSSLPAKSAPK------LPSK 60

Query: 61  PLPPAQAVREARNEGSRGGRGSGRGGRGYGRGREGGGFNRDSANNESSGA----PEDGET 120
           PLPPAQAVREAR++  RGG G G    G+ RGR  GG+NRD  NN  SG       +G+ 
Sbjct: 61  PLPPAQAVREARSDAPRGGGGRG----GFNRGR--GGYNRDDGNNGYSGGYTKPSGEGDV 120

Query: 121 GKTT-ERRGYTGPPRGR---------GGRRGGFNNGEAADGERPRRVFERHSGTGRGNEF 180
            K++ ERRG  G PRG          GGRRGGF+N E  DGERPRR FER SGTGRG++F
Sbjct: 121 SKSSYERRGGGGAPRGSFRGEGGGPGGGRRGGFSN-EGGDGERPRRAFERRSGTGRGSDF 180

Query: 181 KREGSGRGNWGRSTDELAEVAEEAVN-ETEKNVGDEKPVQEDDTAGVNAENPAKEPEEAE 240
           KR+GSGRGNWG   +E+A   E     ETEK+VG EKP  +D  A  N E+     EE E
Sbjct: 181 KRDGSGRGNWGTPGEEIAAETEAVAGVETEKDVG-EKPAVDDVAADANKEDTV--VEEKE 240

Query: 241 PEDKEMTLEEYEKLLEEKRKALLALKAEERKVDPKEFASMQQLSSKKDNNDIFIKLVHLH 300
           PEDKEMTL+EYEK+LEEK+KAL +L   ERKVD K F SMQQLS+KK N++IFIK     
Sbjct: 241 PEDKEMTLDEYEKILEEKKKALQSLTTSERKVDTKVFESMQQLSNKKSNDEIFIK----- 300

Query: 301 NPLTESIIYALMTLGLLGSEKDKRKEIADKEERAKKSFSINEFLKPVDGERHYVPGGRGR 360
                           LGS+KDKRK+  DKEE+AKK+ SINEFLKP +G  +Y  G  GR
Sbjct: 301 ----------------LGSDKDKRKD--DKEEKAKKAVSINEFLKPAEGGNYYRGGRGGR 355

Query: 361 GRGRGSRGGYS---GSSVSNVAAPSIEDPGQFPTLGAK 381
           GRG   RGG S        N AAP+I D  QFP+LG K
Sbjct: 361 GRGGRGRGGVSSGESGGYRNEAAPAIGDAAQFPSLGGK 355

[Close]

BLAST of Spg034461 vs. TAIR 10
Match: AT4G17520.1 (Hyaluronan / mRNA binding family )

HSP 1 Score: 239.6 bits (610), Expect = 4.2e-63
Identity = 191/404 (47.28%), Postives = 235/404 (58.17%), Query Frame = 0


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAPVTAPPPKKGPAQTKPAVSAAQQNKPASLPSK 60
           MA+VNPFDLL DDDAEDPSQ++A+K +  V        P QT          K   +P+K
Sbjct: 1   MASVNPFDLL-DDDAEDPSQIVASKPLKVV-------APVQTA---------KSGKMPTK 60

Query: 61  PLPPAQAVREARNEGSRGGRGSGRGGRGYGRGREGGGFNRDSANNESSGAPEDGETGKTT 120
           P PP+QAVREARN    GGRG+GRGG  YGRG  GG  NRDS NN+   A E+G  G   
Sbjct: 61  PPPPSQAVREARN-APGGGRGAGRGG-SYGRGGRGGN-NRDSRNNDGP-ANENGYGGGYR 120

Query: 121 ERRGYTGPPRG------RGGRRGGFNN-GEAADGERPRRVFERHSGTGRGNEFKREGSGR 180
                 G  RG      RG RRG ++N G++ D ERPR+ ++RHS T  GNE KR+G+GR
Sbjct: 121 RSEEGDGARRGGPVGGYRGDRRGSYSNGGDSGDSERPRKNYDRHSRTAYGNEDKRDGAGR 180

Query: 181 GNWGRSTDELAEVAEEAVNETEKNVGDEKPVQEDDTAGVNAENPAKEPEEAEPEDKEMTL 240
            NWG + D++  V EE+    +KN+  EK   E +      E PA++ EE +PEDKEMTL
Sbjct: 181 ANWGTTQDDITPVTEESTAVVDKNLTVEKQDGEGEATDAKNETPAEKAEE-KPEDKEMTL 240

Query: 241 EEYEKLLEEKRKALLALKAEERKVDPKEFASMQQLSSKKDNND-IFIKLVHLHNPLTESI 300
           EEYEK+LEEK+KAL A K EERKVD K F +MQQLSSKK NND +FIK            
Sbjct: 241 EEYEKVLEEKKKALQATKVEERKVDTKAFEAMQQLSSKKSNNDEVFIK------------ 300

Query: 301 IYALMTLGLLGSEKDKRKEIADKEERAKKSFSINEFLKPVDGERHYVP-----GGR---- 360
                    LG+EKDKR  I ++EE+ +KS SINEFLKP DG+ +Y P     GGR    
Sbjct: 301 ---------LGTEKDKR--ITEREEKTRKSLSINEFLKPADGKSYYRPRGGYQGGREGRG 359

Query: 361 ---------GRGRGRGSRGGYSGSSVSNVAAPSIEDPGQFPTLG 379
                    GR    G R    G + +    P+I D  QFPTLG
Sbjct: 361 PREGNQRDGGRNLREGGRNQRDGGAAAQAPTPAIGDSAQFPTLG 359

[Close]

BLAST of Spg034461 vs. TAIR 10
Match: AT4G16830.3 (Hyaluronan / mRNA binding family )

HSP 1 Score: 236.1 bits (601), Expect = 4.6e-62
Identity = 175/331 (52.87%), Postives = 207/331 (62.54%), Query Frame = 0


Query: 68  VREARNEGSRGGRGSGRGGRGYGRGREGGGFNRDSANNESSGA----PEDGETGKTT-ER 127
           VREAR++  RGG G G    G+ RGR  GG+NRD  NN  SG       +G+  K++ ER
Sbjct: 48  VREARSDAPRGGGGRG----GFNRGR--GGYNRDDGNNGYSGGYTKPSGEGDVSKSSYER 107

Query: 128 RGYTGPPRGR---------GGRRGGFNNGEAADGERPRRVFERHSGTGRGNEFKREGSGR 187
           RG  G PRG          GGRRGGF+N E  DGERPRR FER SGTGRG++FKR+GSGR
Sbjct: 108 RGGGGAPRGSFRGEGGGPGGGRRGGFSN-EGGDGERPRRAFERRSGTGRGSDFKRDGSGR 167

Query: 188 GNWGRSTDELAEVAEEAVN-ETEKNVGDEKPVQEDDTAGVNAENPAKEPEEAEPEDKEMT 247
           GNWG   +E+A   E     ETEK+VG EKP  +D  A  N E+     EE EPEDKEMT
Sbjct: 168 GNWGTPGEEIAAETEAVAGVETEKDVG-EKPAVDDVAADANKEDTV--VEEKEPEDKEMT 227

Query: 248 LEEYEKLLEEKRKALLALKAEERKVDPKEFASMQQLSSKKDNNDIFIKLVHLHNPLTESI 307
           L+EYEK+LEEK+KAL +L   ERKVD K F SMQQLS+KK N++IFIK            
Sbjct: 228 LDEYEKILEEKKKALQSLTTSERKVDTKVFESMQQLSNKKSNDEIFIK------------ 287

Query: 308 IYALMTLGLLGSEKDKRKEIADKEERAKKSFSINEFLKPVDGERHYVPGGRGRGRGRGSR 367
                    LGS+KDKRK+  DKEE+AKK+ SINEFLKP +G  +Y  G  GRGRG   R
Sbjct: 288 ---------LGSDKDKRKD--DKEEKAKKAVSINEFLKPAEGGNYYRGGRGGRGRGGRGR 345

Query: 368 GGYS---GSSVSNVAAPSIEDPGQFPTLGAK 381
           GG S        N AAP+I D  QFP+LG K
Sbjct: 348 GGVSSGESGGYRNEAAPAIGDAAQFPSLGGK 345

[Close]

BLAST of Spg034461 vs. TAIR 10
Match: AT5G47210.1 (Hyaluronan / mRNA binding family )

HSP 1 Score: 233.4 bits (594), Expect = 3.0e-61
Identity = 187/396 (47.22%), Postives = 227/396 (57.32%), Query Frame = 0


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAPVTAPPPKKGPAQTKPAVSAAQQNKPASLPSK 60
           MA++NPFDLLG DDAEDPSQL  A                + + A +A Q  K A  P+K
Sbjct: 1   MASLNPFDLLG-DDAEDPSQLAVALS-------------QKVEKAAAAVQPPKAAKFPTK 60

Query: 61  PLPPAQAVREARNEGSRGGRGSGRGGRGYGRGREGGGFNRDSANNE--------SSGAPE 120
           P PP+QAVRE+RN   +GGRG   G  G+ RGR  GG+NRD+ NN+        S G   
Sbjct: 61  PAPPSQAVRESRN-APQGGRGGTGGRGGFSRGRGNGGYNRDNRNNDAPGNENGFSGGYRR 120

Query: 121 DGETGKTTERRGYTGPPRGRGG----RRGGFNNGEAADGERPRRVFERHSGTGRGNEFKR 180
             E      R G  G  R  GG    RRGG  NGE+ D ERP R ++RHS TG G   KR
Sbjct: 121 PSEDADGASRGGSVGGYRVGGGREGPRRGGVANGESGDVERPPRNYDRHSRTGHGTGMKR 180

Query: 181 EGSGRGNWGRSTDELAEVAEEAVNETEKNVGDEKPVQEDDTAGVNAENPAKEPEEAEPED 240
            G GRGNWG + D++   +EE   E EK+   EK   ED+T     E  A+E  + E E+
Sbjct: 181 NGGGRGNWGTTEDDIPPTSEEPTTEVEKSPVAEKQGGEDETPEAKKELTAEEKAQKEAEE 240

Query: 241 ---KEMTLEEYEKLLEEKRKALLALKAEERKVDPKEFASMQQLSSKKD-NNDIFIKLVHL 300
              +EMTLEEYEK+LEEK+KAL A K EERKVD K F SMQQLS+KK+ + +IFIK    
Sbjct: 241 AEAREMTLEEYEKILEEKKKALQATKVEERKVDTKVFESMQQLSNKKNTDEEIFIK---- 300

Query: 301 HNPLTESIIYALMTLGLLGSEKDKRKEIADKEERAKKSFSINEFLKPVDGERHYVPGGRG 360
                            LGS+K+KRK   D  E+AKKS SINEFLKP DG+R+   GG  
Sbjct: 301 -----------------LGSDKEKRK---DATEKAKKSLSINEFLKPADGKRYNGRGGGS 357

Query: 361 RGR-GRGSRG-GYSGSSVSNVAAPSIEDPGQFPTLG 379
           RGR GRG RG G +       AAP+I D  QFP+LG
Sbjct: 361 RGRGGRGGRGEGGNQRYAKEAAAPAIGDTAQFPSLG 357

[Close]

BLAST of Spg034461 vs. TAIR 10
Match: AT5G47210.3 (Hyaluronan / mRNA binding family )

HSP 1 Score: 184.5 bits (467), Expect = 1.6e-46
Identity = 154/337 (45.70%), Postives = 189/337 (56.08%), Query Frame = 0


Query: 1   MATVNPFDLLGDDDAEDPSQLIAAKQVAPVTAPPPKKGPAQTKPAVSAAQQNKPASLPSK 60
           MA++NPFDLLG DDAEDPSQL  A                + + A +A Q  K A  P+K
Sbjct: 1   MASLNPFDLLG-DDAEDPSQLAVALS-------------QKVEKAAAAVQPPKAAKFPTK 60

Query: 61  PLPPAQAVREARNEGSRGGRGSGRGGRGYGRGREGGGFNRDSANNE--------SSGAPE 120
           P PP+QAVRE+RN   +GGRG   G  G+ RGR  GG+NRD+ NN+        S G   
Sbjct: 61  PAPPSQAVRESRN-APQGGRGGTGGRGGFSRGRGNGGYNRDNRNNDAPGNENGFSGGYRR 120

Query: 121 DGETGKTTERRGYTGPPRGRGG----RRGGFNNGEAADGERPRRVFERHSGTGRGNEFKR 180
             E      R G  G  R  GG    RRGG  NGE+ D ERP R ++RHS TG G   KR
Sbjct: 121 PSEDADGASRGGSVGGYRVGGGREGPRRGGVANGESGDVERPPRNYDRHSRTGHGTGMKR 180

Query: 181 EGSGRGNWGRSTDELAEVAEEAVNETEKNVGDEKPVQEDDTAGVNAENPAKEPEEAEPED 240
            G GRGNWG + D++   +EE   E EK+   EK   ED+T     E  A+E  + E E+
Sbjct: 181 NGGGRGNWGTTEDDIPPTSEEPTTEVEKSPVAEKQGGEDETPEAKKELTAEEKAQKEAEE 240

Query: 241 ---KEMTLEEYEKLLEEKRKALLALKAEERKVDPKEFASMQQLSSKKD-NNDIFIKLVHL 300
              +EMTLEEYEK+LEEK+KAL A K EERKVD K F SMQQLS+KK+ + +IFIK    
Sbjct: 241 AEAREMTLEEYEKILEEKKKALQATKVEERKVDTKVFESMQQLSNKKNTDEEIFIK---- 298

Query: 301 HNPLTESIIYALMTLGLLGSEKDKRKEIADKEERAKK 322
                            LGS+K+KRK   D  E+AKK
Sbjct: 301 -----------------LGSDKEKRK---DATEKAKK 298

The following BLAST results are available for this feature:

BLAST of Spg034461 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7011066.1	9.1e-161	84.51	RGG repeats nuclear RNA binding protein B [Cucurbita argyrosperma subsp. argyros...	[more]
XP_022933029.1	2.6e-160	84.51	RGG repeats nuclear RNA binding protein A-like isoform X2 [Cucurbita moschata]	[more]
XP_022933028.1	3.4e-160	84.51	RGG repeats nuclear RNA binding protein A-like isoform X1 [Cucurbita moschata]	[more]
KAG6575278.1	5.0e-159	84.39	RGG repeats nuclear RNA binding protein B, partial [Cucurbita argyrosperma subsp...	[more]
XP_023520985.1	2.5e-158	83.20	RGG repeats nuclear RNA binding protein A-like isoform X2 [Cucurbita pepo subsp....	[more]

BLAST of Spg034461 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23523	6.0e-75	53.27	RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana OX=3702 GN=RGG...	[more]
Q9SQ56	4.3e-65	55.38	RGG repeats nuclear RNA binding protein A (Fragment) OS=Nicotiana tabacum OX=409...	[more]
O23593	5.9e-62	47.28	RGG repeats nuclear RNA binding protein B OS=Arabidopsis thaliana OX=3702 GN=RGG...	[more]
Q9LVT8	4.2e-60	47.22	RGG repeats nuclear RNA binding protein C OS=Arabidopsis thaliana OX=3702 GN=RGG...	[more]

BLAST of Spg034461 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EYL1	1.3e-160	84.51	RGG repeats nuclear RNA binding protein A-like isoform X2 OS=Cucurbita moschata ...	[more]
A0A6J1F3H7	1.7e-160	84.51	RGG repeats nuclear RNA binding protein A-like isoform X1 OS=Cucurbita moschata ...	[more]
A0A6J1I9W0	1.1e-156	82.94	RGG repeats nuclear RNA binding protein A-like isoform X2 OS=Cucurbita maxima OX...	[more]
A0A6J1ICH9	1.5e-156	82.94	RGG repeats nuclear RNA binding protein A-like isoform X1 OS=Cucurbita maxima OX...	[more]
A0A1S3CBH1	2.3e-154	81.98	H/ACA ribonucleoprotein complex subunit 1-like OS=Cucumis melo OX=3656 GN=LOC103...	[more]

BLAST of Spg034461 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16830.1	4.3e-76	53.27	Hyaluronan / mRNA binding family	[more]
AT4G17520.1	4.2e-63	47.28	Hyaluronan / mRNA binding family	[more]
AT4G16830.3	4.6e-62	52.87	Hyaluronan / mRNA binding family	[more]
AT5G47210.1	3.0e-61	47.22	Hyaluronan / mRNA binding family	[more]
AT5G47210.3	1.6e-46	45.70	Hyaluronan / mRNA binding family	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 233..256
None	No IPR available	GENE3D	6.10.140.1040		coord: 148..260 e-value: 4.6E-11 score: 45.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..208
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 218..232
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..232
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 334..380
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..114
None	No IPR available	PANTHER	PTHR12299:SF53	RGG REPEATS NUCLEAR RNA BINDING PROTEIN A	coord: 1..281
None	No IPR available	PANTHER	PTHR12299:SF53	RGG REPEATS NUCLEAR RNA BINDING PROTEIN A	coord: 302..380
IPR006861	Hyaluronan/mRNA-binding protein	SMART	SM01233	HABP4_PAI_RBP1_2	coord: 150..258 e-value: 1.4E-37 score: 140.8
IPR006861	Hyaluronan/mRNA-binding protein	PFAM	PF04774	HABP4_PAI-RBP1	coord: 150..257 e-value: 7.5E-27 score: 94.5
IPR019084	Stm1-like, N-terminal	PFAM	PF09598	Stm1_N	coord: 1..81 e-value: 3.4E-19 score: 69.4
IPR039764	RNA binding protein HABP4/SERBP1	PANTHER	PTHR12299	HYALURONIC ACID-BINDING PROTEIN 4	coord: 1..281
IPR039764	RNA binding protein HABP4/SERBP1	PANTHER	PTHR12299	HYALURONIC ACID-BINDING PROTEIN 4	coord: 302..380

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg034461.1	Spg034461.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003723	RNA binding