Spg034271 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg034271
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold10: 21013751 .. 21016555 (-)
RNA-Seq Expression	Spg034271
Synteny	Spg034271

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACAGAACGACTGGCACGAGACCCACGGGTTTTTCACCGGCTGTTGTGGACCGAAGCACTACTGTTCAAACTCCTTCATCCTCGACAGTGTCGACCACTTTAAGGAAGAATCCGGTAGTTTTCGTCCAAGAAGATCCATGCCCACCGATTTTCTCCACAAAACCCAAAAACTCGCTGGCCAACAGTTGAGAAAACGCTCGAGGGAATGGTTTACGATGATCCGTGAGATGGGAGCTCAAACGTGTGCGACACTTTAAGAAGAAGCTCGATTGTGTGATGCTGAAGAATCCGCTAAAGTGGGAGAAAGCTCTCGGCAAAGAGAGACTCCATCGGATAACATCTCATAACCTTCTACTAATCCAACTTCTTCTTGTCGGAACAAGCCGTTAGTGACTTACAGTGCACGGAAGAAGGATTCCAAGAAAGTTGCACCCGAAAAGCCTCTGATTATTGAGCCCCTTAAAATGGCTAAAATGTCATGCGCATGTGTTCGAAGAGATGATCCGACAGGCTGTTGCACAAGCCCTCATTATTTCTGAAGGTTATCGGGCTGAACAAGATGCACTTAAAGAAATAAGGGCTAAAAAAGAAAGAGAAAATCAGAGTATGAGGGAAGAAGATGAGTTTGCAATAAAAAGAGACTTGGAAGAAGAAGGAAAGCTGAGAGAAAGAAAGAAGAAGAAAGACAAGAGGCTGAGAGGGCCATACAAGCTGAGAAAGAGAGAAAAGAAGACGAAGAACTTAGGAGATTGGCTGCTGAACTCCAACTCTTGGAGAAAGAAAAAGAAAGAAGAGAAAATTTGAGAGAAGAAGAATAAAGAAGAACATAGGCTGAAGATTTTCTTACAGCCTTTGAGCCACTGCACAAGGCTCAAAGTGAGGCTGAGCAACTGCAAGAAGTTGAAGAAGAGGCCCTTGAAGTGCCATGTGAAGAAAGGTTAGAAAAAGAAAAAGAGGAAGAAACTGAAGGCCAGAATGTGACCGAATTTCGGCCGCATTCTGAGAAAGGCCAGGAAAAGGCCACTAAAGAGAACCAAGCTGATGAGGCCCTTGATCTGCTGTTTGAGTATGATGTTAGAGAACCTCCACCAGCTGCTGATAGCACCACTTCAGGAGATAAAAAGGATGAAGAGGAAATTGAAGGAGAAGAGGTCGAGATCTCTAAAGATAGTGAAACCGATTCAGATTCTAAGATCAAGGAATTGGACGATGATAAAGTGCCAATTTCTACAATTTTGAGGAAGAAAAGAATAAGAGAAATTAGGGTAGAGAGGAGGACAGGGAATAAAAATGACCCTATTTTTGCCAAGAGGTAGAGGACAAGGTCCATGGACGTCTCTCCTGCAGTTCCTCCTACCTTCAAACCTATCAAACCAAAGACCAAATCACCTAAAGCTCCATCACCAAAGAATCCGTTCCCTGAAGTCTTCAAGGATGTTAATTTCCAAGAGAAGATGAAGATTATGAGAAAAAGAGACTTGTTGAACGAGAAGGGATTCTCAAAAAGAGCAAGAACTTTTACAGACTTTGTTACTAAGGTTATCACTCAGTACAAATGGCAGGAGTTCTGTGCTCACCGTCAGGAGGTCATGGTGCCTCAAGAATTCTATGCTTGTTTGCGGGAAGAGAGCATGAACATGGCAGTGGTGAGAGGTAAAATGGTCAGTTTCTCTTCTGTTGACATCAACAGGGTGTACTAGATCAAAGCACCCATGCATCCAAGAGGGAACGATGCCATCAAGAACCCCCCGGCCAAACAGATGAAAGAAGCATTGAAAATGATGGCCAACAAGGGAGTTCAATGGAAGGAATCTCAAACAAAGGTGAAGACATTAGTGCCCAGTGATCTCAAGCAAGAATCGGCAGTGTGGCTTCACTTCATCAAGAATAGATTGATGCCCACAACCCACGATAGTACCATTTCAGTAGAGAGGGTTATGCTTCTTAACAACATCATGAAGGGTTTGGAGATAAATATAGGGAGCATCATCAAAGAAGAGATCCTTTCATGTGGAAGAAAGAGAGCAGGGAAGCTATTCTTTGGGTCACTTCTAACCCAATTGTGTTAGAGGGTGAAGATAAACAACGCTCAAAGGAAGGACAAGGCTACCACTTCCCAAGCTACTCCACCAGCGAGGCTAAATCCTACTTCACCTCCTCAGCACACTCCTATTTCAGGGTCTACACCATCATCAGAGGCCCTTGCATTTGCCTTCCGACAGCTAGACCAGATTGAAAATAAGCTAAAAACTTACTGGGTCTACGCGAAGGAAAGTGATAACTTGCAAAAAACAAGTTATTTATCCTCTAAACTTAAGCTAAAACAAGGCCAAAAGATACATTGATGCGTTACCTTAATGCAATAAGGAAGGCAAATGCGATGATTTTATGCGGTAGGCTATATGTATGTATGCGGGGAGAAATTATAAAAATATAGTGTGCTAATGCAATTAATTCAGTTGTTTGTTGCCCAAGTTTCTCAGCGCAGGCACACATCCCAAGACGATCATGAGACAGACAAGATGGATGAAAAGACCATGCTGACACGTTGACGTGCAAGTGGGCTGAAAATGTGCAATTGGGCTGAAGATGACTGAAGCAAGTCTCTAATTCCTTGGAGAAGTTAGTTTCCTTGGCCTATAAATAGAAGCCACCTGCTCAAAGAAAGATATAGAGGATACGAGGGACGAGAGGGCAGAGACAAAGATCAAGGAGAAAGAGAAATCACAGGAAGCTGTGATTAAGAGTAGACTTGCATTTGCAATGTATTGTGTGATGTATTGTTTTGTTCGCACGAGCTAA

mRNA sequence

ATGCACAGAACGACTGGCACGAGACCCACGGGTTTTTCACCGGCTGTTGTGGACCGAAGCACTACTGTTCAAACTCCTTCATCCTCGACAGTGTCGACCACTTTAAGGAAGAATCCGGTAGTTTTCGTCCAAGAAGATCCATGCCCACCGATTTTCTCCACAAAACCCAAAAACTCGCTGGCCAACATGACTTACAGTGCACGGAAGAAGGATTCCAAGAAAGTTGCACCCGAAAAGCCTCTGATTATTGAGCCCCTTAAAATGGCTAAAATGTCATGCGCATGTGTTCGAAGAGATGATCCGACAGGCTCCTTTGAGCCACTGCACAAGGCTCAAAGTGAGGCTGAGCAACTGCAAGAAGTTGAAGAAGAGGCCCTTGAAGTGCCATGTGAAGAAAGGTTAGAAAAAGAAAAAGAGGAAGAAACTGAAGGCCAGAATGTGACCGAATTTCGGCCGCATTCTGAGAAAGGCCAGGAAAAGGCCACTAAAGAGAACCAAGCTGATGAGGCCCTTGATCTGCTGTTTGAGTATGATGTTAGAGAACCTCCACCAGCTGCTGATAGCACCACTTCAGGAGATAAAAAGGATGAAGAGGAAATTGAAGGAGAAGAGGTCGAGATCTCTAAAGATAGTGAAACCGATTCAGATTCTAAGATCAAGGAATTGGACGATGATAAAAGGACAAGGTCCATGGACGTCTCTCCTGCAGTTCCTCCTACCTTCAAACCTATCAAACCAAAGACCAAATCACCTAAAGCTCCATCACCAAAGAATCCGTTCCCTGAAGTCTTCAAGGATGTTAATTTCCAAGAGAAGATGAAGATTATGAGAAAAAGAGACTTGTTGAACGAGAAGGGATTCTCAAAAAGAGCAAGAACTTTTACAGACTTTGTTACTAAGGTTATCACTCAGTACAAATGGCAGGAGTTCTGTGCTCACCGTCAGGAGGTCATGGTGCCTCAAGAATTCTATGCTTGTTTGCGGGAAGAGAGCATGAACATGGCAGTGATCAAAGCACCCATGCATCCAAGAGGGAACGATGCCATCAAGAACCCCCCGGCCAAACAGATGAAAGAAGCATTGAAAATGATGGCCAACAAGGGAGTTCAATGGAAGGAATCTCAAACAAAGAGGGTGAAGATAAACAACGCTCAAAGGAAGGACAAGGCTACCACTTCCCAAGCTACTCCACCAGCGAGGCTAAATCCTACTTCACCTCCTCAGCACACTCCTATTTCAGGGTCTACACCATCATCAGAGGCCCTTGCATTTGCCTTCCGACAGCTAGACCAGATTGAAAATAAGCTAAAAACTTACTGGGTCTACGCGAAGGAAAAAGCCACCTGCTCAAAGAAAGATATAGAGGATACGAGGGACGAGAGGGCAGAGACAAAGATCAAGGAGAAAGAGAAATCACAGGAAGCTGTGATTAAGAGTAGACTTGCATTTGCAATGTATTGTGTGATGTATTGTTTTGTTCGCACGAGCTAA

Coding sequence (CDS)

ATGCACAGAACGACTGGCACGAGACCCACGGGTTTTTCACCGGCTGTTGTGGACCGAAGCACTACTGTTCAAACTCCTTCATCCTCGACAGTGTCGACCACTTTAAGGAAGAATCCGGTAGTTTTCGTCCAAGAAGATCCATGCCCACCGATTTTCTCCACAAAACCCAAAAACTCGCTGGCCAACATGACTTACAGTGCACGGAAGAAGGATTCCAAGAAAGTTGCACCCGAAAAGCCTCTGATTATTGAGCCCCTTAAAATGGCTAAAATGTCATGCGCATGTGTTCGAAGAGATGATCCGACAGGCTCCTTTGAGCCACTGCACAAGGCTCAAAGTGAGGCTGAGCAACTGCAAGAAGTTGAAGAAGAGGCCCTTGAAGTGCCATGTGAAGAAAGGTTAGAAAAAGAAAAAGAGGAAGAAACTGAAGGCCAGAATGTGACCGAATTTCGGCCGCATTCTGAGAAAGGCCAGGAAAAGGCCACTAAAGAGAACCAAGCTGATGAGGCCCTTGATCTGCTGTTTGAGTATGATGTTAGAGAACCTCCACCAGCTGCTGATAGCACCACTTCAGGAGATAAAAAGGATGAAGAGGAAATTGAAGGAGAAGAGGTCGAGATCTCTAAAGATAGTGAAACCGATTCAGATTCTAAGATCAAGGAATTGGACGATGATAAAAGGACAAGGTCCATGGACGTCTCTCCTGCAGTTCCTCCTACCTTCAAACCTATCAAACCAAAGACCAAATCACCTAAAGCTCCATCACCAAAGAATCCGTTCCCTGAAGTCTTCAAGGATGTTAATTTCCAAGAGAAGATGAAGATTATGAGAAAAAGAGACTTGTTGAACGAGAAGGGATTCTCAAAAAGAGCAAGAACTTTTACAGACTTTGTTACTAAGGTTATCACTCAGTACAAATGGCAGGAGTTCTGTGCTCACCGTCAGGAGGTCATGGTGCCTCAAGAATTCTATGCTTGTTTGCGGGAAGAGAGCATGAACATGGCAGTGATCAAAGCACCCATGCATCCAAGAGGGAACGATGCCATCAAGAACCCCCCGGCCAAACAGATGAAAGAAGCATTGAAAATGATGGCCAACAAGGGAGTTCAATGGAAGGAATCTCAAACAAAGAGGGTGAAGATAAACAACGCTCAAAGGAAGGACAAGGCTACCACTTCCCAAGCTACTCCACCAGCGAGGCTAAATCCTACTTCACCTCCTCAGCACACTCCTATTTCAGGGTCTACACCATCATCAGAGGCCCTTGCATTTGCCTTCCGACAGCTAGACCAGATTGAAAATAAGCTAAAAACTTACTGGGTCTACGCGAAGGAAAAAGCCACCTGCTCAAAGAAAGATATAGAGGATACGAGGGACGAGAGGGCAGAGACAAAGATCAAGGAGAAAGAGAAATCACAGGAAGCTGTGATTAAGAGTAGACTTGCATTTGCAATGTATTGTGTGATGTATTGTTTTGTTCGCACGAGCTAA

Protein sequence

MHRTTGTRPTGFSPAVVDRSTTVQTPSSSTVSTTLRKNPVVFVQEDPCPPIFSTKPKNSLANMTYSARKKDSKKVAPEKPLIIEPLKMAKMSCACVRRDDPTGSFEPLHKAQSEAEQLQEVEEEALEVPCEERLEKEKEEETEGQNVTEFRPHSEKGQEKATKENQADEALDLLFEYDVREPPPAADSTTSGDKKDEEEIEGEEVEISKDSETDSDSKIKELDDDKRTRSMDVSPAVPPTFKPIKPKTKSPKAPSPKNPFPEVFKDVNFQEKMKIMRKRDLLNEKGFSKRARTFTDFVTKVITQYKWQEFCAHRQEVMVPQEFYACLREESMNMAVIKAPMHPRGNDAIKNPPAKQMKEALKMMANKGVQWKESQTKRVKINNAQRKDKATTSQATPPARLNPTSPPQHTPISGSTPSSEALAFAFRQLDQIENKLKTYWVYAKEKATCSKKDIEDTRDERAETKIKEKEKSQEAVIKSRLAFAMYCVMYCFVRTS

Homology

The following BLAST results are available for this feature:

BLAST of Spg034271 vs.


Match Name	E-value	Identity	Description

BLAST of Spg034271 vs.


Match Name	E-value	Identity	Description

BLAST of Spg034271 vs.


Match Name	E-value	Identity	Description

BLAST of Spg034271 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 108..128
None	No IPR available	COILS	Coil	Coil	coord: 454..474
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..176
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 211..231
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 239..258
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..262
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 368..417

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg034271.1	Spg034271.1	mRNA