
Spg034180 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACTGGGCTCGATCGTCCAGAAGCTATTCTCCCGAGCAACGTCGTTTTAGCGGTCCACATAAAAACCTCATCTCCTCTTTCAACGCTCTCTCTGAAAGTAGGGTTTTTGCTTGCCGTGCTGTTCGAAGCCCTCGCAGCCGGTTCCCGAATCTCCAAGATGGTAACTCTTTCTTCCTTCTAGTGATCTTGTTTTTGTATTCTTGTTTTCGATTCGTTTTGTATTACACTTCCGATTGATTTTTTGTATTTGGGAGGTTTTGTGATTTTGAGTTTTCTTAAACATTCATTCGCAGCCGTCTCACAAGACTTTCAGAATCAAGAAGAAGTTGGCGAAGAAGATGAGACAGAACAGGCCTATTCCTCACTGGATCCGCCTTAGGACCGACAATACCATCAGGTAATTACTCTTCCGTTTGGTTTTCTTTCATGTAATCATTTCAGTACTTCTCAGTTTTCAATCTAACGCAACATTTTGATATATTGTTCAGGTACAATGCGAAGCGAAGGCACTGGCGCCGCACTAAGCTCGGATTTTGAGGTGTTTTGCTTGTGATTTGCTCTTCATCCTTAGCGATTGTTTTGAACTTGTTTAAGCGTTAGTTTTGGAGAAGACAAAGGATATAGAGCTAGATGTTTGAATTTTTGTCTCTCAATGAAAAACTTATCGAAGAGAAACCCCTGTAGTATTTTGGCTTACTTCTATTTTAATTATATATCTGAGTAGTTTCAATTCATATGTTAATCTCGTGTTCGTTTTCGTTTATTGCTATCCTACTTCACATGGATGAGAGGAGTTTGGTATCTAATTAGGCTGTCGATTTATAAATTGTTTCTTTTTTTTATTTCGTATATTAATTGACTGGG ATGGACTGGGCTCGATCGTCCAGAAGCTATTCTCCCGAGCAACGTCGTTTTAGCGGTCCACATAAAAACCTCATCTCCTCTTTCAACGCTCTCTCTGAAAGTAGGGTTTTTGCTTGCCGTGCTGTTCGAAGCCCTCGCAGCCGGTTCCCGAATCTCCAAGATGGTAACTCTTTCTTCCTTCTAGTGATCTTGTTTTTGTATTCTTGTTTTCGATTCCCGTCTCACAAGACTTTCAGAATCAAGAAGAAGTTGGCGAAGAAGATGAGACAGAACAGGCCTATTCCTCACTGGATCCGCCTTAGGACCGACAATACCATCAGGTACAATGCGAAGCGAAGGCACTGGCGCCGCACTAAGCTCGGATTTTGA ATGGACTGGGCTCGATCGTCCAGAAGCTATTCTCCCGAGCAACGTCGTTTTAGCGGTCCACATAAAAACCTCATCTCCTCTTTCAACGCTCTCTCTGAAAGTAGGGTTTTTGCTTGCCGTGCTGTTCGAAGCCCTCGCAGCCGGTTCCCGAATCTCCAAGATGGTAACTCTTTCTTCCTTCTAGTGATCTTGTTTTTGTATTCTTGTTTTCGATTCCCGTCTCACAAGACTTTCAGAATCAAGAAGAAGTTGGCGAAGAAGATGAGACAGAACAGGCCTATTCCTCACTGGATCCGCCTTAGGACCGACAATACCATCAGGTACAATGCGAAGCGAAGGCACTGGCGCCGCACTAAGCTCGGATTTTGA MDWARSSRSYSPEQRRFSGPHKNLISSFNALSESRVFACRAVRSPRSRFPNLQDGNSFFLLVILFLYSCFRFPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF Homology
BLAST of Spg034180 vs. NCBI nr
Match: XP_022962571.1 (uncharacterized protein LOC111462968 [Cucurbita moschata]) HSP 1 Score: 112.1 bits (279), Expect = 3.5e-21 Identity = 58/75 (77.33%), Postives = 61/75 (81.33%), Query Frame = 0
BLAST of Spg034180 vs. NCBI nr
Match: KAG7024013.1 (60S ribosomal protein L39-1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 111.7 bits (278), Expect = 4.5e-21 Identity = 57/75 (76.00%), Postives = 58/75 (77.33%), Query Frame = 0
BLAST of Spg034180 vs. NCBI nr
Match: CAD1823142.1 (unnamed protein product [Ananas comosus var. bracteatus]) HSP 1 Score: 110.5 bits (275), Expect = 1.0e-20 Identity = 60/90 (66.67%), Postives = 64/90 (71.11%), Query Frame = 0
BLAST of Spg034180 vs. NCBI nr
Match: KAG7029487.1 (60S ribosomal protein L39, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 110.2 bits (274), Expect = 1.3e-20 Identity = 57/67 (85.07%), Postives = 58/67 (86.57%), Query Frame = 0
BLAST of Spg034180 vs. NCBI nr
Match: KAF3452997.1 (hypothetical protein FNV43_RR03430 [Rhamnella rubrinervis]) HSP 1 Score: 109.4 bits (272), Expect = 2.2e-20 Identity = 53/66 (80.30%), Postives = 57/66 (86.36%), Query Frame = 0
BLAST of Spg034180 vs. ExPASy Swiss-Prot
Match: Q6KAJ8 (60S ribosomal protein L39-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL39A PE=3 SV=2) HSP 1 Score: 104.8 bits (260), Expect = 7.2e-22 Identity = 48/50 (96.00%), Postives = 50/50 (100.00%), Query Frame = 0
BLAST of Spg034180 vs. ExPASy Swiss-Prot
Match: P51426 (60S ribosomal protein L39-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL39B PE=3 SV=2) HSP 1 Score: 104.8 bits (260), Expect = 7.2e-22 Identity = 48/50 (96.00%), Postives = 50/50 (100.00%), Query Frame = 0
BLAST of Spg034180 vs. ExPASy Swiss-Prot
Match: P51425 (60S ribosomal protein L39 OS=Zea mays OX=4577 GN=RPL39 PE=3 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 7.2e-22 Identity = 48/50 (96.00%), Postives = 50/50 (100.00%), Query Frame = 0
BLAST of Spg034180 vs. ExPASy Swiss-Prot
Match: Q5SMI4 (60S ribosomal protein L39-3 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL39C PE=3 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 2.1e-21 Identity = 47/50 (94.00%), Postives = 50/50 (100.00%), Query Frame = 0
BLAST of Spg034180 vs. ExPASy Swiss-Prot
Match: P51424 (60S ribosomal protein L39-1 OS=Arabidopsis thaliana OX=3702 GN=RPL39A PE=3 SV=2) HSP 1 Score: 102.4 bits (254), Expect = 3.6e-21 Identity = 47/50 (94.00%), Postives = 48/50 (96.00%), Query Frame = 0
BLAST of Spg034180 vs. ExPASy TrEMBL
Match: A0A6J1HDM7 (uncharacterized protein LOC111462968 OS=Cucurbita moschata OX=3662 GN=LOC111462968 PE=3 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 1.7e-21 Identity = 58/75 (77.33%), Postives = 61/75 (81.33%), Query Frame = 0
BLAST of Spg034180 vs. ExPASy TrEMBL
Match: A0A6V7NWZ1 (BURP domain-containing protein OS=Ananas comosus var. bracteatus OX=296719 GN=CB5_LOCUS6353 PE=3 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 4.9e-21 Identity = 60/90 (66.67%), Postives = 64/90 (71.11%), Query Frame = 0
BLAST of Spg034180 vs. ExPASy TrEMBL
Match: A0A540NJE1 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_003157 PE=3 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 1.4e-20 Identity = 55/98 (56.12%), Postives = 66/98 (67.35%), Query Frame = 0
BLAST of Spg034180 vs. ExPASy TrEMBL
Match: A0A3L6RVG2 (60S ribosomal protein L39 OS=Panicum miliaceum OX=4540 GN=C2845_PM11G23010 PE=3 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 1.9e-20 Identity = 51/58 (87.93%), Postives = 53/58 (91.38%), Query Frame = 0
BLAST of Spg034180 vs. ExPASy TrEMBL
Match: A0A2P5ANB0 (Ribosomal protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_315710 PE=3 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 2.4e-20 Identity = 50/52 (96.15%), Postives = 51/52 (98.08%), Query Frame = 0
BLAST of Spg034180 vs. TAIR 10
Match: AT4G31985.1 (Ribosomal protein L39 family protein ) HSP 1 Score: 102.4 bits (254), Expect = 2.6e-22 Identity = 47/50 (94.00%), Postives = 48/50 (96.00%), Query Frame = 0
BLAST of Spg034180 vs. TAIR 10
Match: AT3G02190.1 (Ribosomal protein L39 family protein ) HSP 1 Score: 97.4 bits (241), Expect = 8.2e-21 Identity = 45/50 (90.00%), Postives = 47/50 (94.00%), Query Frame = 0
BLAST of Spg034180 vs. TAIR 10
Match: AT2G25210.1 (Ribosomal protein L39 family protein ) HSP 1 Score: 90.9 bits (224), Expect = 7.7e-19 Identity = 42/43 (97.67%), Postives = 42/43 (97.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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