Spg034168 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg034168
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Auxin-responsive protein
Location	scaffold13: 36935137 .. 36936248 (-)
RNA-Seq Expression	Spg034168
Synteny	Spg034168

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTCTCTTTACGCCCCTTTAAACCTCAAACAACACACCCATTCTAAAATTATGGAACTCCAACTTGGCCTTTCTCTTCCCCTTCACAGCCAGCCCAAAGGCGCCACGGACTGCATCAAACGCAAGCGTGCACTAACCACAAACCACCTGCCCCAGACTTTGCCTTTGCTGTCTTGGAATGATAAGCCCAACGACGAAGACGACCACCCTCCACGGAGACCCAGCTTTTGCAACGATCACAAGTCAGTCCAAACTCTCCCCATATTAAATTTAACCCAAAATTAATAGCACAGTATTTAATTACGATATTACTTTTCAACATGATACATATAGGAAAGACGAAGAGAAGAGCAAAGCAGTAGTGGGGTGGCCGCCGATTGACTCCTGGAGGAAGAAGGCCCTTCACCGCCGCCGCCCTCGGCAGCCGGTAGCAGCCAATCACACTAACCAAAACTCACTCTTTGTGAAGGTCAAAATGGAGGGTTTACCAATTGCAAGAAAACTCGATCTCACCCTCTATCACTCTCACCACTCCCTCAAAACTGCCCTCATCGCCATGTTCACCACAAGTAATTAAATACCAACTTTTTCACTTTTTTTTTTTTCTTTTTTTGTTCTGTGTTATAATTAATTAACGGAATAAATTTGAATTCTTGTTGTAACAGATCAAGCAATTGATTGCGACGGTTGGGATTTCACGCTGATTTATGAAGACAAAGATGGAGATTGGCTTCTGGCAGAGGATCTTCCATGGAAGTACGTTCTAAATAAATTCCATTTCATTACTTTTTTTCAAGGGGAAAAAGAAAGCATATATATGCTAAATTCTTCTTTATTTGTTTCTTATGCTTTATTTATTTATTTATTTATTTTACAGTTCCTTCGTCGAGTCTGTGCAGCGCCTCAAGATTCTGGTGCGGAAGAGAAACAAAGAATAAAGTTTGCACATATGATAGTGATACCACACAAAATATTTCCAAATCTTATTCGACGTATAATAATCATTTAAATATATATGTATTATAAAATGGTATAATGTGTTTACCTTCTATATTACAAACTTAGAAATGTGGAGCTATGTGGTCGAAATTATTCTATAAAAAGTTATTTGGG

mRNA sequence

ATGGAACTCCAACTTGGCCTTTCTCTTCCCCTTCACAGCCAGCCCAAAGGCGCCACGGACTGCATCAAACGCAAGCGTGCACTAACCACAAACCACCTGCCCCAGACTTTGCCTTTGCTGTCTTGGAATGATAAGCCCAACGACGAAGACGACCACCCTCCACGGAGACCCAGCTTTTGCAACGATCACAAGAAAGACGAAGAGAAGAGCAAAGCAGTAGTGGGGTGGCCGCCGATTGACTCCTGGAGGAAGAAGGCCCTTCACCGCCGCCGCCCTCGGCAGCCGGTAGCAGCCAATCACACTAACCAAAACTCACTCTTTGTGAAGGTCAAAATGGAGGGTTTACCAATTGCAAGAAAACTCGATCTCACCCTCTATCACTCTCACCACTCCCTCAAAACTGCCCTCATCGCCATGTTCACCACAAATCAAGCAATTGATTGCGACGGTTGGGATTTCACGCTGATTTATGAAGACAAAGATGGAGATTGGCTTCTGGCAGAGGATCTTCCATGGAATTCCTTCGTCGAGTCTGTGCAGCGCCTCAAGATTCTGGTGCGGAAGAGAAACAAAGAATAA

Coding sequence (CDS)

ATGGAACTCCAACTTGGCCTTTCTCTTCCCCTTCACAGCCAGCCCAAAGGCGCCACGGACTGCATCAAACGCAAGCGTGCACTAACCACAAACCACCTGCCCCAGACTTTGCCTTTGCTGTCTTGGAATGATAAGCCCAACGACGAAGACGACCACCCTCCACGGAGACCCAGCTTTTGCAACGATCACAAGAAAGACGAAGAGAAGAGCAAAGCAGTAGTGGGGTGGCCGCCGATTGACTCCTGGAGGAAGAAGGCCCTTCACCGCCGCCGCCCTCGGCAGCCGGTAGCAGCCAATCACACTAACCAAAACTCACTCTTTGTGAAGGTCAAAATGGAGGGTTTACCAATTGCAAGAAAACTCGATCTCACCCTCTATCACTCTCACCACTCCCTCAAAACTGCCCTCATCGCCATGTTCACCACAAATCAAGCAATTGATTGCGACGGTTGGGATTTCACGCTGATTTATGAAGACAAAGATGGAGATTGGCTTCTGGCAGAGGATCTTCCATGGAATTCCTTCGTCGAGTCTGTGCAGCGCCTCAAGATTCTGGTGCGGAAGAGAAACAAAGAATAA

Protein sequence

MELQLGLSLPLHSQPKGATDCIKRKRALTTNHLPQTLPLLSWNDKPNDEDDHPPRRPSFCNDHKKDEEKSKAVVGWPPIDSWRKKALHRRRPRQPVAANHTNQNSLFVKVKMEGLPIARKLDLTLYHSHHSLKTALIAMFTTNQAIDCDGWDFTLIYEDKDGDWLLAEDLPWNSFVESVQRLKILVRKRNKE

Homology

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BLAST of Spg034168 vs. NCBI nr
Match: XP_008445232.2 (PREDICTED: auxin-responsive protein IAA29-like [Cucumis melo] >KAA0064917.1 auxin-responsive protein IAA29-like [Cucumis melo var. makuwa])

HSP 1 Score: 261.5 bits (667), Expect = 5.6e-66
Identity = 141/209 (67.46%), Postives = 157/209 (75.12%), Query Frame = 0


Query: 1   MELQLGLSLPLHSQP----KGATDCIKRKRALTTNHLPQTLPLLSWNDKPNDEDD-HPPR 60
           MELQLGLSLPLH+ P    K A         +  N LPQTLPLLSWNDKP DEDD H P+
Sbjct: 1   MELQLGLSLPLHNHPNIHCKPAGGFEHHPLFVIENELPQTLPLLSWNDKPKDEDDPHHPK 60

Query: 61  RPSFCNDHKKDEEKSKAVVGWPPIDSWRKKALH-RRRP------RQPVAANHTN-----Q 120
              FCN  KKDEEK +A VGWPPI+SWRKKA H   +P      R+P+ A+H +     Q
Sbjct: 61  GTHFCNIQKKDEEKKQA-VGWPPIESWRKKAFHWHTQPPQTIDNRRPIVADHQSNQNGGQ 120

Query: 121 NSLFVKVKMEGLPIARKLDLTLYHSHHSLKTALIAMFTTNQAIDCDGWDFTLIYEDKDGD 180
           NSLFVKVKMEG+ IARKLDL LYHSHHSLKTALI MFTTN+ +D + WDFTLIYED+DGD
Sbjct: 121 NSLFVKVKMEGVAIARKLDLKLYHSHHSLKTALITMFTTNKGMDNNDWDFTLIYEDEDGD 180

Query: 181 WLLAEDLPWNSFVESVQRLKILVRKRNKE 193
           W+LAEDLPWNSFVES QRLKILVRKRNKE
Sbjct: 181 WMLAEDLPWNSFVESAQRLKILVRKRNKE 208

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BLAST of Spg034168 vs. NCBI nr
Match: XP_004138851.1 (auxin-responsive protein IAA29 [Cucumis sativus] >KGN62959.1 hypothetical protein Csa_022378 [Cucumis sativus])

HSP 1 Score: 256.5 bits (654), Expect = 1.8e-64
Identity = 140/208 (67.31%), Postives = 153/208 (73.56%), Query Frame = 0


Query: 1   MELQLGLSLPLHSQP----KGATDCIKRKRALTTNHLPQTLPLLSWNDKPNDEDD-HPPR 60
           MELQLGLSLPLHS P    K A         +  N LPQTLPLLSWNDKP DEDD H PR
Sbjct: 1   MELQLGLSLPLHSHPNIHCKPAGGRFGDHSFILENELPQTLPLLSWNDKPKDEDDPHHPR 60

Query: 61  RPSFCNDHKKDEEKSKAVVGWPPIDSWRKKAL--HRRRP-----RQPVAANHTNQ----N 120
              FCN  KKDEEK +A VGWPPI+SWRKKA   H + P     R+P  A+ +NQ    N
Sbjct: 61  GTHFCNIQKKDEEKKQA-VGWPPIESWRKKAFDWHTQPPQTIENRRPAVADQSNQNGGRN 120

Query: 121 SLFVKVKMEGLPIARKLDLTLYHSHHSLKTALIAMFTTNQAIDCDGWDFTLIYEDKDGDW 180
           SLFVKVKMEG+ IARKLDL LYHSHHSLKTAL+ MFTTN+ +D   WDFTLIYED+DGDW
Sbjct: 121 SLFVKVKMEGVAIARKLDLKLYHSHHSLKTALLTMFTTNKGMDNSDWDFTLIYEDEDGDW 180

Query: 181 LLAEDLPWNSFVESVQRLKILVRKRNKE 193
           +LAEDLPWNSFVES QRLKILV  RNKE
Sbjct: 181 MLAEDLPWNSFVESAQRLKILVGNRNKE 207

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BLAST of Spg034168 vs. NCBI nr
Match: XP_038886196.1 (auxin-responsive protein IAA29-like [Benincasa hispida])

HSP 1 Score: 252.7 bits (644), Expect = 2.6e-63
Identity = 136/205 (66.34%), Postives = 152/205 (74.15%), Query Frame = 0


Query: 1   MELQLGLSLPLHSQPKGATDCIKRKRALTTNHLPQTLPLLSWNDKPNDEDDHP-PRRPSF 60
           MELQLGL LP H+ P        +   +  N LPQTLPLLSWNDKP D+DD P PR   F
Sbjct: 1   MELQLGLPLPFHNHPNIHHKPAFQDPFIIGNQLPQTLPLLSWNDKPKDQDDPPHPRGTHF 60

Query: 61  CNDHKKDEEKSKAVVGWPPIDSWRKKALH-------RRRPRQPVAANHTN-----QNSLF 120
            N  KKDEEK +A VGWPPI+SWRKK  H           R+PV A+ ++     QNSLF
Sbjct: 61  SNIQKKDEEKKEA-VGWPPIESWRKKVFHWQPQPPQTAENRRPVVADQSSNQNDGQNSLF 120

Query: 121 VKVKMEGLPIARKLDLTLYHSHHSLKTALIAMFTTNQAIDCDGWDFTLIYEDKDGDWLLA 180
           VKVKMEG+ IARKLDL LYHSH SLKTALIAMFTT +AID +GWDFT+IYED+DGDW+LA
Sbjct: 121 VKVKMEGVAIARKLDLRLYHSHQSLKTALIAMFTTYKAIDHNGWDFTIIYEDQDGDWILA 180

Query: 181 EDLPWNSFVESVQRLKILVRKRNKE 193
           EDLPWNSFVESVQRLKILVRKRNKE
Sbjct: 181 EDLPWNSFVESVQRLKILVRKRNKE 204

[Close]

BLAST of Spg034168 vs. NCBI nr
Match: XP_023546551.1 (auxin-responsive protein IAA20-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 234.2 bits (596), Expect = 9.5e-58
Identity = 126/198 (63.64%), Postives = 145/198 (73.23%), Query Frame = 0


Query: 1   MELQLGLSLPLHSQPKGATDCIKRKRALTTNHLPQTLPLLSWNDKPNDEDDHPPRRPSFC 60
           MELQLGLSLPLHS           +     N LP+TLPLLSWNDKP D+DD P    +  
Sbjct: 58  MELQLGLSLPLHS--------YAFEHPRIGNELPRTLPLLSWNDKPKDDDDSPHTGGTHF 117

Query: 61  NDHKKDEEKSKAVVGWPPIDSWRKKALHRRRPRQPVAANHTNQ----NSLFVKVKMEGLP 120
           +  +KD+E+    VGWPPI++WRKKAL +         N +NQ    NSLFVKVKMEG+ 
Sbjct: 118 STIQKDDEEKNPSVGWPPIETWRKKALLQHPQPPQTVENRSNQNGGPNSLFVKVKMEGVA 177

Query: 121 IARKLDLTLYHSHHSLKTALIAMFTTN--QAIDCDGWDFTLIYEDKDGDWLLAEDLPWNS 180
           IARKLDL LYHSH+SLKTALIAMFTT+  +AID   WDFTLIYED+DGDWLLAEDLPWNS
Sbjct: 178 IARKLDLRLYHSHNSLKTALIAMFTTSNYEAIDSKCWDFTLIYEDEDGDWLLAEDLPWNS 237

Query: 181 FVESVQRLKILVRKRNKE 193
           FVESV+RLK+LVRKRNKE
Sbjct: 238 FVESVRRLKVLVRKRNKE 247

[Close]

BLAST of Spg034168 vs. NCBI nr
Match: KAG6598565.1 (Auxin-induced protein AUX28, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 233.4 bits (594), Expect = 1.6e-57
Identity = 126/198 (63.64%), Postives = 147/198 (74.24%), Query Frame = 0


Query: 1   MELQLGLSLPLHSQPKGATDCIKRKRALTTNHLPQTLPLLSWNDKPNDEDDHPPRRPSFC 60
           MELQLGLSLPLH+        ++  R    N LPQTLPLLSWNDKP D+D  P    +  
Sbjct: 1   MELQLGLSLPLHNY------ALEHPR--IGNELPQTLPLLSWNDKPKDDDGSPHAGGTHF 60

Query: 61  NDHKKDEEKSKAVVGWPPIDSWRKKALHRRRPRQPVAANHTNQ----NSLFVKVKMEGLP 120
           +  +K++E+    VGWPPI++WRKKAL +         N +NQ    NSLFVKVKMEG+ 
Sbjct: 61  STIQKEDEEKNPSVGWPPIETWRKKALLQHPQPPQTVENRSNQNGGPNSLFVKVKMEGVA 120

Query: 121 IARKLDLTLYHSHHSLKTALIAMFTTN--QAIDCDGWDFTLIYEDKDGDWLLAEDLPWNS 180
           IARKLDL LYHSH+SLKTALIAMFTT+  +AID  GWDFTLIYED+DGDWLLAEDLPWNS
Sbjct: 121 IARKLDLRLYHSHNSLKTALIAMFTTSNYEAIDNKGWDFTLIYEDEDGDWLLAEDLPWNS 180

Query: 181 FVESVQRLKILVRKRNKE 193
           FVESV+RLK+LVRKRNKE
Sbjct: 181 FVESVRRLKVLVRKRNKE 190

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BLAST of Spg034168 vs. ExPASy Swiss-Prot
Match: Q93WC4 (Auxin-responsive protein IAA29 OS=Arabidopsis thaliana OX=3702 GN=IAA29 PE=1 SV=2)

HSP 1 Score: 102.1 bits (253), Expect = 7.4e-21
Identity = 75/241 (31.12%), Postives = 115/241 (47.72%), Query Frame = 0


Query: 1   MELQLGLSLPLHSQPK--------------GATDCIKRKRA----------LTTNHLPQT 60
           MEL LGLSL  H   K              GA  C+  ++           +  N     
Sbjct: 1   MELDLGLSLSPHKSSKLGFNFDLNKHCAIEGAASCLGTEKLRFEATFGLGNVEENCYMPK 60

Query: 61  LPLLSWNDKPNDEDDHPPRRPSFCNDHKKDEEKSKAVVGWPPIDSWRKK--ALHRR---- 120
             L + N +PN+ED+ P    S  +    DEE++  VVGWPP+ +   K  + H R    
Sbjct: 61  QRLFALNGQPNEEDEDPLESES--SIVYDDEEENSEVVGWPPVKTCMIKYGSYHHRHIRN 120

Query: 121 --------RPRQPVAANH------------------TNQNSLFVKVKMEGLPIARKLDLT 180
                   R R+  A N+                  ++++S++VKVKM+G+ IARK+D+ 
Sbjct: 121 HHHCPYHHRGRRITAMNNNISNPTTATVGSSSSSSISSRSSMYVKVKMDGVAIARKVDIK 180

Query: 181 LYHSHHSLKTALIAMFTTNQAIDCDGWDFTLIYEDKDGDWLLAEDLPWNSFVESVQRLKI 186
           L++S+ SL  +LI MFT  +  D +  ++T  ++ K+GDWLL  D+ W  F ESV R+ I
Sbjct: 181 LFNSYESLTNSLITMFTEYEDCDREDTNYTFTFQGKEGDWLLRGDVTWKIFAESVHRISI 239

[Close]

BLAST of Spg034168 vs. ExPASy Swiss-Prot
Match: A2XLV9 (Auxin-responsive protein IAA13 OS=Oryza sativa subsp. indica OX=39946 GN=IAA13 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 5.3e-19
Identity = 62/159 (38.99%), Postives = 84/159 (52.83%), Query Frame = 0


Query: 44  DKPNDEDDHPPRRPSFCNDHKKDEEKSKAVVGWPPIDSWR-----------KKALHRRRP 103
           + P  E    P   +  +  K    K++A VGWPP+ S+R           KK     + 
Sbjct: 59  EAPAAEKAKRPAEAAAADAEKPPAPKAQA-VGWPPVRSFRRNIMTVQSVKSKKEEEADKQ 118

Query: 104 RQPVAANHTNQN-SLFVKVKMEGLPIARKLDLTLYHSHHSLKTALIAMF-----TTNQAI 163
           +Q  AAN +  N S FVKV M+G P  RK+DL +Y+S+  L  AL  MF     T N   
Sbjct: 119 QQQPAANASGSNSSAFVKVSMDGAPYLRKVDLKMYNSYKDLSLALQKMFGTFTATGNNMN 178

Query: 164 DCDGWDFTLIYEDKDGDWLLAEDLPWNSFVESVQRLKIL 186
           + +G D    YEDKDGDW+L  D+PW  FVES +RL+I+
Sbjct: 179 EVNGSDAVTTYEDKDGDWMLVGDVPWQMFVESCKRLRIM 216

[Close]

BLAST of Spg034168 vs. ExPASy Swiss-Prot
Match: Q10D34 (Auxin-responsive protein IAA13 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA13 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 5.3e-19
Identity = 62/159 (38.99%), Postives = 84/159 (52.83%), Query Frame = 0


Query: 44  DKPNDEDDHPPRRPSFCNDHKKDEEKSKAVVGWPPIDSWR-----------KKALHRRRP 103
           + P  E    P   +  +  K    K++A VGWPP+ S+R           KK     + 
Sbjct: 59  EAPAAEKAKRPAEAAAADAEKPPAPKAQA-VGWPPVRSFRRNIMTVQSVKSKKEEEADKQ 118

Query: 104 RQPVAANHTNQN-SLFVKVKMEGLPIARKLDLTLYHSHHSLKTALIAMF-----TTNQAI 163
           +Q  AAN +  N S FVKV M+G P  RK+DL +Y+S+  L  AL  MF     T N   
Sbjct: 119 QQQPAANASGSNSSAFVKVSMDGAPYLRKVDLKMYNSYKDLSLALQKMFGTFTATGNNMN 178

Query: 164 DCDGWDFTLIYEDKDGDWLLAEDLPWNSFVESVQRLKIL 186
           + +G D    YEDKDGDW+L  D+PW  FVES +RL+I+
Sbjct: 179 EVNGSDAVTTYEDKDGDWMLVGDVPWQMFVESCKRLRIM 216

[Close]

BLAST of Spg034168 vs. ExPASy Swiss-Prot
Match: O24542 (Auxin-induced protein 22D OS=Vigna radiata var. radiata OX=3916 GN=AUX22D PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.4e-18
Identity = 48/118 (40.68%), Postives = 70/118 (59.32%), Query Frame = 0


Query: 73  VVGWPPIDSWRKKALHRRRPRQPVAANHTNQNSLFVKVKMEGLPIARKLDLTLYHSHHSL 132
           VVGWPPI S+RK  + +++  +      +  N ++VKV M G P  RK+DL +Y S+  L
Sbjct: 71  VVGWPPIRSYRKNNVQQKKEEE------SEGNGMYVKVSMAGAPYLRKIDLKVYKSYPEL 130

Query: 133 KTALIAMFTT-----NQAIDCDGWDFTLIYEDKDGDWLLAEDLPWNSFVESVQRLKIL 186
             AL  MF       ++    +G ++   YEDKDGDW+L  D+PWN FV S +RL+I+
Sbjct: 131 LKALENMFKCIFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWNMFVSSCKRLRIM 182

[Close]

BLAST of Spg034168 vs. ExPASy Swiss-Prot
Match: Q5VRR0 (Auxin-responsive protein IAA20 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA20 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 5.9e-18
Identity = 73/199 (36.68%), Postives = 98/199 (49.25%), Query Frame = 0


Query: 1   MELQLGLSLPLHS-QPKGATDCIKRKRALTTNHLPQTLPLLSWND-----KPNDEDDHPP 60
           MEL+LGL L L S  P  AT           N  P +     + +     K +D++D   
Sbjct: 1   MELELGLRLALPSPSPSPATATAAGSELDLLNSAPGSCRKRGFEEALGGFKTDDDNDDGN 60

Query: 61  RRPSFCNDHKKDEEKSKAVVGWPPIDSWRKKALHRRRPRQPVAANHTNQNSLFVKVKMEG 120
            R    +   +   K + +VGWPP+     K LHRRR               +VKVKMEG
Sbjct: 61  GRGGDGDSDGEMGNKRRKLVGWPPV-----KCLHRRR--------DGGCGGGYVKVKMEG 120

Query: 121 LPIARKLDLTLYHSHHSLKTALIAMF-TTNQAIDCDGWD------FTLIYEDKDGDWLLA 180
           L I RKLDL++  S+  L   L  MF +TNQ    DG D      + + YED +GDW+  
Sbjct: 121 LAIGRKLDLSILGSYAELLDTLHLMFPSTNQE---DGHDRRRRHPYAVTYEDGEGDWMQV 180

Query: 181 EDLPWNSFVESVQRLKILV 187
            D+PW +F +SV+RLKILV
Sbjct: 181 GDVPWEAFAKSVKRLKILV 183

[Close]

BLAST of Spg034168 vs. ExPASy TrEMBL
Match: A0A5A7VD13 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002350 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.7e-66
Identity = 141/209 (67.46%), Postives = 157/209 (75.12%), Query Frame = 0


Query: 1   MELQLGLSLPLHSQP----KGATDCIKRKRALTTNHLPQTLPLLSWNDKPNDEDD-HPPR 60
           MELQLGLSLPLH+ P    K A         +  N LPQTLPLLSWNDKP DEDD H P+
Sbjct: 1   MELQLGLSLPLHNHPNIHCKPAGGFEHHPLFVIENELPQTLPLLSWNDKPKDEDDPHHPK 60

Query: 61  RPSFCNDHKKDEEKSKAVVGWPPIDSWRKKALH-RRRP------RQPVAANHTN-----Q 120
              FCN  KKDEEK +A VGWPPI+SWRKKA H   +P      R+P+ A+H +     Q
Sbjct: 61  GTHFCNIQKKDEEKKQA-VGWPPIESWRKKAFHWHTQPPQTIDNRRPIVADHQSNQNGGQ 120

Query: 121 NSLFVKVKMEGLPIARKLDLTLYHSHHSLKTALIAMFTTNQAIDCDGWDFTLIYEDKDGD 180
           NSLFVKVKMEG+ IARKLDL LYHSHHSLKTALI MFTTN+ +D + WDFTLIYED+DGD
Sbjct: 121 NSLFVKVKMEGVAIARKLDLKLYHSHHSLKTALITMFTTNKGMDNNDWDFTLIYEDEDGD 180

Query: 181 WLLAEDLPWNSFVESVQRLKILVRKRNKE 193
           W+LAEDLPWNSFVES QRLKILVRKRNKE
Sbjct: 181 WMLAEDLPWNSFVESAQRLKILVRKRNKE 208

[Close]

BLAST of Spg034168 vs. ExPASy TrEMBL
Match: A0A1S3BCX7 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103488319 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.7e-66
Identity = 141/209 (67.46%), Postives = 157/209 (75.12%), Query Frame = 0


Query: 1   MELQLGLSLPLHSQP----KGATDCIKRKRALTTNHLPQTLPLLSWNDKPNDEDD-HPPR 60
           MELQLGLSLPLH+ P    K A         +  N LPQTLPLLSWNDKP DEDD H P+
Sbjct: 1   MELQLGLSLPLHNHPNIHCKPAGGFEHHPLFVIENELPQTLPLLSWNDKPKDEDDPHHPK 60

Query: 61  RPSFCNDHKKDEEKSKAVVGWPPIDSWRKKALH-RRRP------RQPVAANHTN-----Q 120
              FCN  KKDEEK +A VGWPPI+SWRKKA H   +P      R+P+ A+H +     Q
Sbjct: 61  GTHFCNIQKKDEEKKQA-VGWPPIESWRKKAFHWHTQPPQTIDNRRPIVADHQSNQNGGQ 120

Query: 121 NSLFVKVKMEGLPIARKLDLTLYHSHHSLKTALIAMFTTNQAIDCDGWDFTLIYEDKDGD 180
           NSLFVKVKMEG+ IARKLDL LYHSHHSLKTALI MFTTN+ +D + WDFTLIYED+DGD
Sbjct: 121 NSLFVKVKMEGVAIARKLDLKLYHSHHSLKTALITMFTTNKGMDNNDWDFTLIYEDEDGD 180

Query: 181 WLLAEDLPWNSFVESVQRLKILVRKRNKE 193
           W+LAEDLPWNSFVES QRLKILVRKRNKE
Sbjct: 181 WMLAEDLPWNSFVESAQRLKILVRKRNKE 208

[Close]

BLAST of Spg034168 vs. ExPASy TrEMBL
Match: A0A0A0LPM6 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_2G381840 PE=3 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 8.7e-65
Identity = 140/208 (67.31%), Postives = 153/208 (73.56%), Query Frame = 0


Query: 1   MELQLGLSLPLHSQP----KGATDCIKRKRALTTNHLPQTLPLLSWNDKPNDEDD-HPPR 60
           MELQLGLSLPLHS P    K A         +  N LPQTLPLLSWNDKP DEDD H PR
Sbjct: 1   MELQLGLSLPLHSHPNIHCKPAGGRFGDHSFILENELPQTLPLLSWNDKPKDEDDPHHPR 60

Query: 61  RPSFCNDHKKDEEKSKAVVGWPPIDSWRKKAL--HRRRP-----RQPVAANHTNQ----N 120
              FCN  KKDEEK +A VGWPPI+SWRKKA   H + P     R+P  A+ +NQ    N
Sbjct: 61  GTHFCNIQKKDEEKKQA-VGWPPIESWRKKAFDWHTQPPQTIENRRPAVADQSNQNGGRN 120

Query: 121 SLFVKVKMEGLPIARKLDLTLYHSHHSLKTALIAMFTTNQAIDCDGWDFTLIYEDKDGDW 180
           SLFVKVKMEG+ IARKLDL LYHSHHSLKTAL+ MFTTN+ +D   WDFTLIYED+DGDW
Sbjct: 121 SLFVKVKMEGVAIARKLDLKLYHSHHSLKTALLTMFTTNKGMDNSDWDFTLIYEDEDGDW 180

Query: 181 LLAEDLPWNSFVESVQRLKILVRKRNKE 193
           +LAEDLPWNSFVES QRLKILV  RNKE
Sbjct: 181 MLAEDLPWNSFVESAQRLKILVGNRNKE 207

[Close]

BLAST of Spg034168 vs. ExPASy TrEMBL
Match: A0A6J1HG86 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111462707 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.7e-57
Identity = 129/199 (64.82%), Postives = 146/199 (73.37%), Query Frame = 0


Query: 1   MELQLGLSLPLHSQPKGATDCIKRKRALTTNHLPQTLPLLSWNDKPNDEDDHP-PRRPSF 60
           MELQLGLSLPLH+           +     N LPQTLPLLSWNDKP D+D  P P    F
Sbjct: 1   MELQLGLSLPLHN--------YAFEHPRIGNELPQTLPLLSWNDKPKDDDGSPHPEGTHF 60

Query: 61  CNDHKKDEEKSKAVVGWPPIDSWRKKALHRRRPRQPVAANHTNQ----NSLFVKVKMEGL 120
               K+DEEK+ + VGWPPI++WRKKAL +         N +NQ    NSLFVKVKMEG+
Sbjct: 61  STIQKEDEEKNPS-VGWPPIETWRKKALLQHPQPPQTVENRSNQNGGPNSLFVKVKMEGV 120

Query: 121 PIARKLDLTLYHSHHSLKTALIAMFTTN--QAIDCDGWDFTLIYEDKDGDWLLAEDLPWN 180
            IARKLDL LYHSH+SLKTALIAMFTT+  +AID   WDFTLIYED+DGDWLLAEDLPWN
Sbjct: 121 AIARKLDLRLYHSHNSLKTALIAMFTTSNYEAIDNKCWDFTLIYEDEDGDWLLAEDLPWN 180

Query: 181 SFVESVQRLKILVRKRNKE 193
           SFVESV+RLK+LVRKRNKE
Sbjct: 181 SFVESVRRLKVLVRKRNKE 190

[Close]

BLAST of Spg034168 vs. ExPASy TrEMBL
Match: A0A6J1BRK7 (Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111004766 PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.7e-52
Identity = 126/210 (60.00%), Postives = 146/210 (69.52%), Query Frame = 0


Query: 1   MELQLGLSLPLHSQ---PKGATDCIKRKRALTTNHLPQT--LPLLSWNDKPNDEDDHPPR 60
           MELQLGL+LPLH+Q   PK         R  +TN L  T  LPLLSWN  PNDED+H   
Sbjct: 1   MELQLGLALPLHTQTLKPKPKPKPANSPR--STNPLSHTLPLPLLSWNHNPNDEDEHNNP 60

Query: 61  RPS-FCNDHKKDEEKSK-AVVGWPPIDSWRKKALHRR-----------RPRQPVAANHTN 120
            P+ F   H++DE++ K  VVGWPP++SWR KA H R             R+PVA +   
Sbjct: 61  TPTHFSTLHQEDEDEDKNRVVGWPPVESWRTKAFHCRPHLPPPPPPPLNCRRPVAGH--- 120

Query: 121 QNSLFVKVKMEGLPIARKLDLTLYHSHHSLKTALIAMFTTNQAID-CDGWDFTLIYEDKD 180
             SLFVKVKMEG+ I RKLDL LYHSH+SLK A+I+MF   Q ID  +GWDFT+IYEDKD
Sbjct: 121 -RSLFVKVKMEGVAITRKLDLGLYHSHNSLKNAIISMFAPYQGIDHNNGWDFTVIYEDKD 180

Query: 181 GDWLLAEDLPWNSFVESVQRLKILVRKRNK 192
           GDWLLAEDLPWNSFVESVQRLKILVRKRN+
Sbjct: 181 GDWLLAEDLPWNSFVESVQRLKILVRKRNE 204

[Close]

BLAST of Spg034168 vs. TAIR 10
Match: AT4G32280.1 (indole-3-acetic acid inducible 29 )

HSP 1 Score: 102.1 bits (253), Expect = 5.2e-22
Identity = 75/241 (31.12%), Postives = 115/241 (47.72%), Query Frame = 0


Query: 1   MELQLGLSLPLHSQPK--------------GATDCIKRKRA----------LTTNHLPQT 60
           MEL LGLSL  H   K              GA  C+  ++           +  N     
Sbjct: 1   MELDLGLSLSPHKSSKLGFNFDLNKHCAIEGAASCLGTEKLRFEATFGLGNVEENCYMPK 60

Query: 61  LPLLSWNDKPNDEDDHPPRRPSFCNDHKKDEEKSKAVVGWPPIDSWRKK--ALHRR---- 120
             L + N +PN+ED+ P    S  +    DEE++  VVGWPP+ +   K  + H R    
Sbjct: 61  QRLFALNGQPNEEDEDPLESES--SIVYDDEEENSEVVGWPPVKTCMIKYGSYHHRHIRN 120

Query: 121 --------RPRQPVAANH------------------TNQNSLFVKVKMEGLPIARKLDLT 180
                   R R+  A N+                  ++++S++VKVKM+G+ IARK+D+ 
Sbjct: 121 HHHCPYHHRGRRITAMNNNISNPTTATVGSSSSSSISSRSSMYVKVKMDGVAIARKVDIK 180

Query: 181 LYHSHHSLKTALIAMFTTNQAIDCDGWDFTLIYEDKDGDWLLAEDLPWNSFVESVQRLKI 186
           L++S+ SL  +LI MFT  +  D +  ++T  ++ K+GDWLL  D+ W  F ESV R+ I
Sbjct: 181 LFNSYESLTNSLITMFTEYEDCDREDTNYTFTFQGKEGDWLLRGDVTWKIFAESVHRISI 239

[Close]

BLAST of Spg034168 vs. TAIR 10
Match: AT5G43700.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 90.9 bits (224), Expect = 1.2e-18
Identity = 46/118 (38.98%), Postives = 68/118 (57.63%), Query Frame = 0


Query: 73  VVGWPPIDSWRKKALHRRRPRQPVAANHTNQNSLFVKVKMEGLPIARKLDLTLYHSHHSL 132
           +VGWPP+ S+RK  +  ++       N       +VKV M+G P  RK+DLT+Y  +  L
Sbjct: 63  IVGWPPVRSYRKNNVQTKKSESEGQGN-------YVKVSMDGAPYLRKIDLTMYKQYPEL 122

Query: 133 KTALIAM--FTTNQAIDCDGW---DFTLIYEDKDGDWLLAEDLPWNSFVESVQRLKIL 186
             +L  M  F+  +  + +G+   DF   YEDKDGDW+L  D+PW  FV S +RL+I+
Sbjct: 123 MKSLENMFKFSVGEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIM 173

[Close]

BLAST of Spg034168 vs. TAIR 10
Match: AT3G17600.1 (indole-3-acetic acid inducible 31 )

HSP 1 Score: 90.5 bits (223), Expect = 1.6e-18
Identity = 52/112 (46.43%), Postives = 66/112 (58.93%), Query Frame = 0


Query: 76  WPPIDSWRKKALHRRRPRQPVAANHTNQNSLFVKVKMEGLPIARKLDLTLYHSHHSLKTA 135
           WPPI S  +  L  RR          +  SLFVKV MEG+PI RKLDL ++  + SL   
Sbjct: 48  WPPIKSRLRDTLKGRR-----LLRRGDDTSLFVKVYMEGVPIGRKLDLCVFSGYESLLEN 107

Query: 136 LIAMFTTNQAIDCDGWD---FTLIYEDKDGDWLLAEDLPWNSFVESVQRLKI 185
           L  MF T  +I C   D     L YEDKDGDW++  D+PW+ F+E+V+RLKI
Sbjct: 108 LSHMFDT--SIICGNRDRKHHVLTYEDKDGDWMMVGDIPWDMFLETVRRLKI 152

[Close]

BLAST of Spg034168 vs. TAIR 10
Match: AT4G14550.1 (indole-3-acetic acid inducible 14 )

HSP 1 Score: 90.1 bits (222), Expect = 2.1e-18
Identity = 52/151 (34.44%), Postives = 83/151 (54.97%), Query Frame = 0


Query: 54  PRRPSFCNDHKKDEEKSKAVVGWPPIDSWRKKALHRRRPRQPVAANHTNQNSL-FVKVKM 113
           P+  +F  D  K   K++ VVGWPP+ ++RK  +  ++  +   A  +   ++ FVKV M
Sbjct: 59  PKEKTFLKDPSKPPAKAQ-VVGWPPVRNYRKNVMANQKSGEAEEAMSSGGGTVAFVKVSM 118

Query: 114 EGLPIARKLDLTLYHSHHSLKTALIAMFTT-----------------NQAID-CDGWDFT 173
           +G P  RK+DL +Y S+  L  AL  MF++                 ++ +D  +  ++ 
Sbjct: 119 DGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQGMIDFMNESKVMDLLNSSEYV 178

Query: 174 LIYEDKDGDWLLAEDLPWNSFVESVQRLKIL 186
             YEDKDGDW+L  D+PW  FVES +RL+I+
Sbjct: 179 PSYEDKDGDWMLVGDVPWPMFVESCKRLRIM 208

[Close]

BLAST of Spg034168 vs. TAIR 10
Match: AT1G04240.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 89.7 bits (221), Expect = 2.7e-18
Identity = 46/118 (38.98%), Postives = 70/118 (59.32%), Query Frame = 0


Query: 73  VVGWPPIDSWRKKALHRRRPRQPVAANHTNQNSLFVKVKMEGLPIARKLDLTLYHSHHSL 132
           +VGWPP+ S+RK  +  ++      + H  Q  ++VKV M+G P  RK+DL+ Y  +  L
Sbjct: 65  IVGWPPVRSYRKNNIQSKKNE----SEHEGQ-GIYVKVSMDGAPYLRKIDLSCYKGYSEL 124

Query: 133 KTALIAM--FTTNQAIDCDGW---DFTLIYEDKDGDWLLAEDLPWNSFVESVQRLKIL 186
             AL  M  F+  +  + DG+   DF   YEDKDGDW+L  D+PW  F+ + +RL+I+
Sbjct: 125 LKALEVMFKFSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIM 177

The following BLAST results are available for this feature:

BLAST of Spg034168 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445232.2	5.6e-66	67.46	PREDICTED: auxin-responsive protein IAA29-like [Cucumis melo] >KAA0064917.1 auxi...	[more]
XP_004138851.1	1.8e-64	67.31	auxin-responsive protein IAA29 [Cucumis sativus] >KGN62959.1 hypothetical protei...	[more]
XP_038886196.1	2.6e-63	66.34	auxin-responsive protein IAA29-like [Benincasa hispida]	[more]
XP_023546551.1	9.5e-58	63.64	auxin-responsive protein IAA20-like [Cucurbita pepo subsp. pepo]	[more]
KAG6598565.1	1.6e-57	63.64	Auxin-induced protein AUX28, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Spg034168 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93WC4	7.4e-21	31.12	Auxin-responsive protein IAA29 OS=Arabidopsis thaliana OX=3702 GN=IAA29 PE=1 SV=...	[more]
A2XLV9	5.3e-19	38.99	Auxin-responsive protein IAA13 OS=Oryza sativa subsp. indica OX=39946 GN=IAA13 P...	[more]
Q10D34	5.3e-19	38.99	Auxin-responsive protein IAA13 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA13...	[more]
O24542	3.4e-18	40.68	Auxin-induced protein 22D OS=Vigna radiata var. radiata OX=3916 GN=AUX22D PE=2 S...	[more]
Q5VRR0	5.9e-18	36.68	Auxin-responsive protein IAA20 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA20...	[more]

BLAST of Spg034168 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VD13	2.7e-66	67.46	Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A1S3BCX7	2.7e-66	67.46	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103488319 PE=3 SV=1	[more]
A0A0A0LPM6	8.7e-65	67.31	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_2G381840 PE=3 SV=1	[more]
A0A6J1HG86	1.7e-57	64.82	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111462707 PE=3 SV=1	[more]
A0A6J1BRK7	1.7e-52	60.00	Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111004766 PE=3 SV=...	[more]

BLAST of Spg034168 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32280.1	5.2e-22	31.12	indole-3-acetic acid inducible 29	[more]
AT5G43700.1	1.2e-18	38.98	AUX/IAA transcriptional regulator family protein	[more]
AT3G17600.1	1.6e-18	46.43	indole-3-acetic acid inducible 31	[more]
AT4G14550.1	2.1e-18	34.44	indole-3-acetic acid inducible 14	[more]
AT1G04240.1	2.7e-18	38.98	AUX/IAA transcriptional regulator family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 99..192 e-value: 1.2E-27 score: 97.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..71
None	No IPR available	PANTHER	PTHR31734:SF44	AUXIN-RESPONSIVE PROTEIN IAA29	coord: 29..187
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 101..184
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 45..145 e-value: 3.1E-22 score: 79.6 coord: 149..185 e-value: 2.4E-13 score: 50.5
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 29..187
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 105..189 score: 22.672537

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg034168.1	Spg034168.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010033	response to organic substance
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding