Spg034163 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg034163
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	GTP-binding nuclear protein
Location	scaffold13: 36538972 .. 36544634 (+)
RNA-Seq Expression	Spg034163
Synteny	Spg034163

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGCCTTCCATTGCCGACCTCTGTTCGTCAAATTTCTACGCATTTCTCTTCAATCGCCTAATTCTCAGTTGCAGATAGACATTGTCGATGGTAAGATTTCTTCTCTCTGCTCTCTTTTTCCCTCTAGTATTCGATATTTTTCATGCTTCTACTTATTTTCGGTTTCATCGTTTTGCTCAGGCGCTGCCAAATCAGGCCACCGTAGATTACCCTAGCTTCAAGCTTGTAATAGTCGGAGATGGTGGAACAGGTATGGAGATAGATTTGTTAGTTTCATTTTCTCGATATCTCCGTAAGCTGCTCAATTCGCCATGTTTGTATAGCTTTTAGGAACTAGAACTTTATGATGCTGCTCCTCGGGTTTTACTGAACTCTAGCTTCTTTAGTGGAACAGAAATCGTCTTCTTCCTCCGTTTTTCTTAGCGTATGAATTCGATTGGAAATGTTGCAAAAACAGGTTATCGGACTAGGCTTCTATTGATAGCCGTATCATTCTTGCATGTATTGCTTGATTAGAGATCTATGTATTTCTCCTTTTTACAGATTTTTTGTTTATTGCGATGATGTCATTAACCTCTAACGGAGGATTGTGTCCTGATACAGGGAAGACGACCTTTGTTAAACGTCATCTTACTGGAGAGTTCGAGAAGAAATATGAACGTAAGAATGAATTATGTCATTAATCGTTGCTCGTCGTTCAATGTTGATATTTGTAAGGTTGAAGCTCTATTAATATTTGGCCTGGCTTGATTATGATCAGCGACAATCGGAGTTGAAGTTCATCCACTGGACTTCTTTACGAACTATGGAAAGATAAGGTTTTACTGCTGGGACACCGCTGGTCAGGAGAAGTTTGGTGGACTTAGAGATGGTTACTAGTAAGTGCTCATGTGTTGTATCAAATGCGTTTTGATCCACGGCAATGATTTTTACTCTGAATATGCTGGTATATATCATTAGAGTTGTATTTTTCCATGTGGTTTGTTCATTGTGGCTGCGTCCATTAGTAGTCTATAATGAAGTTGCACGTTCTAAAGTTATTGTGTGTCTTCAGAAATTCTGCTTTCCGTATGAGGGTTGAGGGTTTTGATTTCTACAATGGAATTGTATTACAATCTAGTCTATCCAGTTCTTCCAGTTGAGCCTAAAATATAGCTCAGTACCATGGGTGGGATGTTTAAACAATTTGATCCCAATGTGCCTTTTGAATTTCATCAACCTGGTTTACTACATTATGATTGCTGCTTAAGATCTTTAAATTTTTGCTGGACGATTTTCACGGTCTCAAGTGTCTTTGTAATTAACTTTTTATATAAGAAGCATGATATTATAGTTTGGTTGGCATGTTCACACGTTCAACCCAAGTAGACAGTCTTAACTCTTTGAAACTTTAGACCGAGTATTTGATTTTTTTCTAATGTTCTTCGTTTTTTCACGTGAACATGATGAAAAATATTAGAGAAAATAAAAGGATTTTAATTGAAATACTTCATTTATTCGTTACATTAATTGTGTGTTTGGACATCAATAATTTTGAGTATTTTTTTCCTTGTAAGCGTCTGTCTTCTGAAATTGTCATAAATATTGGAATTCCTTTATGAACTATAGTGACAAAGGCATTGTTTTGCTATGATATTATGCATCTAGCTTCTCTTTGCATGCTCACTAGCTTTGCCGAAAAAAAAATATTTATTGTCTTATTACCCTATTCCTTTGGTATTTTCAATGTTGATGTTATAGTCTGAAATGCAGAAGCTATAGTTTACTGTTGCAATATGTTGAACATAGATACAGTGTAATTCTCAAATTATGTTCAGTTTTCTTAGAATTTGATAGGGTGCTGTGACTTTGCTTGTGACTTCAGTTAATTGATTGTTTTTCCATGTGTGTCCTACACTCCTACTCTACTTCAGTATTATTGTGATTTCAATTAATTATACTTGCTTTGCCCTTTGTGCGTCTGTTTTGTCTGTTCTGATAAGCTTACTTGTGTATATTGTTGCTTGTTGTTACTTCTTAGTTCTTAAGTTTTCTGTTCTGAGTCTGACAAGTTTAGTTGTATATTTCTTTATGCTTTATCCTTGCTATCCTTCTGTTATAGTTGTTTTAACAAGTGTATCTATTCTAACCATGCTTTTTTTTTTTTTGTTGGTACTTTTCAGTATTCATGGACAGTGTGCCATCATCATGTTTGATGTTACTGCTCGTTTAACATACAAAAATGTCCCAACATGGCACCGTGATCTCTGCAGGTATTGTGTTTCTAAGCCCAAGGCTCTAAAACACTTTTAAACCCGGGCTTTCTTAGTTTCTTAATTTGCTGGCAATTACATTTACGTGGCAAGTTTTGATGTTTGTAAAATGAAGGAAAATTAAGCAAAAATTTAAAATAAATAAATAATACTCCCGTGTTTTTTAATTGTATTGGTTCTAAAGTTGGCATTGCCTTGTATTAGGGTTTGTGAGAACATACCCATCGTATTGTGTGGAAACAAGGTCGATGTGAAAAACAGACAGGTTAAAGCTAAGCAGGTGACCTTCCACAGGAAGAAAAATCTCCAGTACTACGAAATTTCTGCAAAGAGTAATTACAACTTTGAGAAGCCCTTCTTGTACCTTGCCAGAAAGCTTGCTGGGTATGTTCAGTTGTTAGTGTTGGTTTGACATAATTCTTGTTGGTCTTTGTTTGACTTTCATACAATCTATTATGTTGACTCGTTGACAAACGAATTCGTCTTTTATTTAAACTTGCAGGAATACTGAGCTCCACTTCGTCGAATCACCTGCCCTTGCTCCTCCTGAAGTCGAAATTAACTTGGCCGAACAAGCCCAGTAAGTAGCTCGCTATTACCTGATTAATATTTAGATCTGTGCCCCTTTGCGTCATCTGCACATAGATTTTTGCATGGCATGTGAGTTTTTGGTGTTATGACTTTGCTTTGAAGTCCTTAGTGTTTATCATCTTCTAGCTTAGAAATGTAGGAACTATACCCTAGGTTGGCTTAATACATTAGGAGAATGATTTCAAACCACAGAGGCCTCCTACTTAAAAATATTGTACAACTTTCTTGCATGAGAACGTTTGAAGTACACTTGAGCTGGTTTAGACACTCGTGAATATGAAGAAAAAAAAAGTAGCAATTATAGGTGTATGAAAAAACAAACAACAATTATAGGTTTATTTAAAAACAAGTAGCAATCATAGGTTTATTTACTAGGTTGAATTAAGTTCACCGTCCCGTACTTGTGATAATATGTTTTACGCATGTGTGCTACAATGTCTCTCCCAATTACTGTACTTATGACGATATTTATTTGTGTTTTAGGCATGAAGCAGAGTTGGCACAAGCTGCTGCACAACCTCTTCCTGATGAAGATGACGATGCTTTCGAGTAATTAGCTTTAATACAAGTAGACTCTTGGCTTCGCCTTCTAGGGTTTATAGTGATTCTGGTCATCTGGAATTTGGAAAGCTGACCTACCTGGTTGCTTATTGTGGTCGGTTGTTGGGTTGTGTAATTCACTATATGATGTGTCATAGTAGCTTTGGTGTTTGGTATATTACTACTACTGTTATCAATTAAAATTTTGACATATGAATACCATTTGCACTTTTGAAAAGTTAATACATAACAATCCGAGTAAAACAGTTAAATACATCAAATTTGGTAGAAAATTCAGACATTGGAGTAAAAGGCGAAAATCTCCGATGGACAATGCTTGTTTGTGGTGTCGGTCCCAAGGGAGGGTCTCCTTTCAACTTTGCTATTTTGCTATTTCATAATTTTGAGAGCTCCGTGATTATAAGCTGGCCTATCGAGACACTGCTCCCACACTCCATTGTGATCTTTGGCTTCGAAAAGAAAGCAAAGGATATATAATCAAGATGGCTCCGCAAAGAGGTATCTGAGTAAAGGAGCAACAACAGCTATGCTCAAACTGTTCCCTAGCAATGCATAACTGCAAAGAAAAACAAAACCGCGAGCCAAATGTTAGGATTAAACACTCTTCTATTCTATATTTGGCAGTTCGAAACGGTTGCTTCAATAAAACTACACAACTGTTCAGAAGGCAGCGACCAAACTACTGATTTCGTACTCTGATTTTGACATCATCGGGGTGGTGACATTGTCAAAGCCCTGATTTCGTACGTTTTACATTGACAAAGAAATTTTAATGAGAAAGGTCAAAGTACAAGTGAAGGCAAAGAAAACCGATCCCGTTTGATAATCATTTGGTTTTTGGTTTTTGAAAATTAAGTTTGTTTTCTATGAATTTCTTTACCATTGTTTTCATCTTTGTTGAGGACATATTTGAAATCCTAGCTAAATTTAAAAAAATAAAAACATGTTTTTGAAAACTACTTTTTTTCAGTTTTCAAAACTTGACTTGGTTTTTGAAAACATGGAAACAAGGTATATAACAAAATAAGGAATTTAATGGCGGGAGTAGTATTTTTAAGCTTAATTTTCAAAAACTAAAAACCAAAAATCAAATGGTTATCAACCGGGACCTTAGTTATAAGGTCTAGATTGACCTGTAGAGTTGAAACTACAAGTAAAGTGATGAGGAAGGGAGGGGCGAGGGTCCATTGAAGATACATACCGTTGTCTAAGGCCGATATGCTGTGGAAATTGAAAATCTTCCGGAAAAGAATGCAAGTTAGCAACCTAGTATAAGTAAAAAGAAACAAAATCTACGGATTAATAAACTGCATTAGCTTGAAAATGAGATCTAGCGAAGAATCATTTTGATATAAAATCATCATGCACCTCTCTGGGAGTAAAATATCTGAGCTTCTGCTCTTTCAGAGAATGAGCCTTGCCCATCTTTTCCACCTGCATTACCAGTCAGTGACAAAAATCAGAGATAATGTTGGGAGAAAATTTGCATCTTATAATTCTAGACAGACGAGAACATCACTGCTGGCTAACACAAGTTTGCATATTGTAATTCTAAAAATGAGAATTATAAACTATTTGTGTTTACTATTTAACATGCAGCATCAAGTTTGGAACATGCTTCATTTCTAGAGCTCCAGGCTCAGGAGGAATTAGAACTCTATTGCATCCCCACACAAAAGGTGCAAGACCACATATTAGAAACTGTTATGTCAAGGATAAAATTTTACCTCAAAAGGTGCCAAAAGTGAGCCTGTACCCTTCACATATCGGTAGTAGCTTTTTGTAAAACAGCAGCATCGCTTTGAATCAGGATAAACAATATCTAAACTCTTTTAAGGATCTAGTCCATAGTCTATAGTGAGTTTTAGTGATGAGACAATACTGGTCACTCTATAACAATTAAACATAAAATACGTCTGGATACCCATAGCACTGCCCCATCTGTCTATCAAACTGGATGGGACGAGATACTGATCAAAAGATCCAATGTCTTGGTCATCCGCATCATTGATTTTCTCCAACGCATCCTCTCCACGAATACTGCTAGCATCAGGAAAACTAAATTCACTGTGATGGCTGGAATTGTCAAGAAACCTACATATTGGCTCACAAGAGAGCAGCATCTTATCAGACATCGCTTGTGATCCATGATTTTCAATGATTTCTAAGTCGACATCATTCTCGAGTAATGGGCTTGGAGACCAAAGAAGTTGATTATTGTATGATTGCCTTTGAAAGGATAAAGGTCTCCTTTTAGCC

mRNA sequence

ATGGCGCTGCCAAATCAGGCCACCGTAGATTACCCTAGCTTCAAGCTTGTAATAGTCGGAGATGGTGGAACAGGGAAGACGACCTTTGTTAAACGTCATCTTACTGGAGAGTTCGAGAAGAAATATGAACCGACAATCGGAGTTGAAGTTCATCCACTGGACTTCTTTACGAACTATGGAAAGATAAGGTTTTACTGCTGGGACACCGCTGGTCAGGAGAAGTTTGGTGGACTTAGAGATGGTTACTATATTCATGGACAGTGTGCCATCATCATGTTTGATGTTACTGCTCGTTTAACATACAAAAATGTCCCAACATGGCACCGTGATCTCTGCAGGGTTTGTGAGAACATACCCATCGTATTGTGTGGAAACAAGGTCGATGTGAAAAACAGACAGGTTAAAGCTAAGCAGGTGACCTTCCACAGGAAGAAAAATCTCCAGTACTACGAAATTTCTGCAAAGAGTAATTACAACTTTGAGAAGCCCTTCTTGTACCTTGCCAGAAAGCTTGCTGGGAATACTGAGCTCCACTTCGTCGAATCACCTGCCCTTGCTCCTCCTGAAGTCGAAATTAACTTGGCCGAACAAGCCCAGCATGAAGCAGAGTTGGCACAAGCTGCTGCACAACCTCTTCCTGATGAAGATGACGATGCTTTCGAGTAA

Coding sequence (CDS)

ATGGCGCTGCCAAATCAGGCCACCGTAGATTACCCTAGCTTCAAGCTTGTAATAGTCGGAGATGGTGGAACAGGGAAGACGACCTTTGTTAAACGTCATCTTACTGGAGAGTTCGAGAAGAAATATGAACCGACAATCGGAGTTGAAGTTCATCCACTGGACTTCTTTACGAACTATGGAAAGATAAGGTTTTACTGCTGGGACACCGCTGGTCAGGAGAAGTTTGGTGGACTTAGAGATGGTTACTATATTCATGGACAGTGTGCCATCATCATGTTTGATGTTACTGCTCGTTTAACATACAAAAATGTCCCAACATGGCACCGTGATCTCTGCAGGGTTTGTGAGAACATACCCATCGTATTGTGTGGAAACAAGGTCGATGTGAAAAACAGACAGGTTAAAGCTAAGCAGGTGACCTTCCACAGGAAGAAAAATCTCCAGTACTACGAAATTTCTGCAAAGAGTAATTACAACTTTGAGAAGCCCTTCTTGTACCTTGCCAGAAAGCTTGCTGGGAATACTGAGCTCCACTTCGTCGAATCACCTGCCCTTGCTCCTCCTGAAGTCGAAATTAACTTGGCCGAACAAGCCCAGCATGAAGCAGAGTTGGCACAAGCTGCTGCACAACCTCTTCCTGATGAAGATGACGATGCTTTCGAGTAA

Protein sequence

MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFVESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE

Homology

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BLAST of Spg034163 vs. NCBI nr
Match: XP_022951841.1 (GTP-binding nuclear protein Ran-3-like [Cucurbita moschata] >XP_023002491.1 GTP-binding nuclear protein Ran-3-like [Cucurbita maxima] >XP_023538292.1 GTP-binding nuclear protein Ran-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 457.6 bits (1176), Expect = 6.1e-125
Identity = 219/221 (99.10%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALP+QATVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNYG
Sbjct: 1   MALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFV 180

Query: 181 ESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 222
           ESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE
Sbjct: 181 ESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 221

[Close]

BLAST of Spg034163 vs. NCBI nr
Match: KAG6585456.1 (GTP-binding nuclear protein Ran-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 457.6 bits (1176), Expect = 6.1e-125
Identity = 219/221 (99.10%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALP+QATVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNYG
Sbjct: 439 MALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYG 498

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 499 KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 558

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFV
Sbjct: 559 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFV 618

Query: 181 ESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 222
           ESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE
Sbjct: 619 ESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 659

[Close]

BLAST of Spg034163 vs. NCBI nr
Match: KAG7020371.1 (GTP-binding nuclear protein Ran-3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 455.7 bits (1171), Expect = 2.3e-124
Identity = 218/220 (99.09%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 2   ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 61
           ALP+QATVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNYGK
Sbjct: 9   ALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYGK 68

Query: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 69  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 128

Query: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFVE 181
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFVE
Sbjct: 129 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFVE 188

Query: 182 SPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 222
           SPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE
Sbjct: 189 SPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 228

[Close]

BLAST of Spg034163 vs. NCBI nr
Match: XP_038884642.1 (GTP-binding nuclear protein Ran1A-like [Benincasa hispida] >BAP11913.1 Ran-GTPase [Citrullus lanatus] >BAR79437.1 Ran-GTPase [Citrullus lanatus])

HSP 1 Score: 452.6 bits (1163), Expect = 2.0e-123
Identity = 217/221 (98.19%), Postives = 219/221 (99.10%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG
Sbjct: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGN ELHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFV 180

Query: 181 ESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 222
           ESPALAPPEV+I+LA QAQHEAELAQAAAQPLPDEDDDAFE
Sbjct: 181 ESPALAPPEVQIDLAAQAQHEAELAQAAAQPLPDEDDDAFE 221

[Close]

BLAST of Spg034163 vs. NCBI nr
Match: XP_022996825.1 (GTP-binding nuclear protein Ran-3-like [Cucurbita maxima] >KAG6598587.1 GTP-binding nuclear protein Ran-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 450.7 bits (1158), Expect = 7.4e-123
Identity = 216/221 (97.74%), Postives = 219/221 (99.10%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG
Sbjct: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTEL FV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFV 180

Query: 181 ESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 222
           ESPALAPPEV+I++A QAQHEAELAQAAAQPLPDEDDDAFE
Sbjct: 181 ESPALAPPEVQIDMAVQAQHEAELAQAAAQPLPDEDDDAFE 221

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BLAST of Spg034163 vs. ExPASy Swiss-Prot
Match: Q8H156 (GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana OX=3702 GN=RAN3 PE=1 SV=2)

HSP 1 Score: 435.6 bits (1119), Expect = 3.2e-121
Identity = 208/221 (94.12%), Postives = 213/221 (96.38%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTN G
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  LHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFV 180

Query: 181 ESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 222
           ESPALAPPEV+I+LA Q QHEAELA AA+QPLPD+DDD FE
Sbjct: 181 ESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDTFE 221

[Close]

BLAST of Spg034163 vs. ExPASy Swiss-Prot
Match: P41917 (GTP-binding nuclear protein Ran-2 OS=Arabidopsis thaliana OX=3702 GN=RAN2 PE=1 SV=3)

HSP 1 Score: 431.8 bits (1109), Expect = 4.7e-120
Identity = 206/221 (93.21%), Postives = 213/221 (96.38%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTN G
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  LHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFV 180

Query: 181 ESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 222
           ESPALAPPEV +++A Q Q+EA+LA AAAQPLPD+DDDAFE
Sbjct: 181 ESPALAPPEVHLDIAAQQQNEADLAAAAAQPLPDDDDDAFE 221

[Close]

BLAST of Spg034163 vs. ExPASy Swiss-Prot
Match: P41916 (GTP-binding nuclear protein Ran-1 OS=Arabidopsis thaliana OX=3702 GN=RAN1 PE=1 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 1.0e-119
Identity = 205/221 (92.76%), Postives = 213/221 (96.38%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTN G
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  LHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFV 180

Query: 181 ESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 222
           E+PALAPPEV I++A+Q ++EAEL QAAAQPLPD+DDD FE
Sbjct: 181 ETPALAPPEVHIDIADQQKNEAELLQAAAQPLPDDDDDIFE 221

[Close]

BLAST of Spg034163 vs. ExPASy Swiss-Prot
Match: P38546 (GTP-binding nuclear protein Ran1 OS=Solanum lycopersicum OX=4081 GN=RAN1 PE=2 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 1.0e-119
Identity = 207/221 (93.67%), Postives = 211/221 (95.48%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTN G
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  LHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDGNLHFV 180

Query: 181 ESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 222
           ESPALAPPEV I+LA QA HE EL QAA QPLPD+DD+AFE
Sbjct: 181 ESPALAPPEVHIDLAAQALHEEELQQAANQPLPDDDDEAFE 221

[Close]

BLAST of Spg034163 vs. ExPASy Swiss-Prot
Match: P38548 (GTP-binding nuclear protein Ran/TC4 OS=Vicia faba OX=3906 PE=2 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 3.0e-119
Identity = 204/221 (92.31%), Postives = 212/221 (95.93%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTN G
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  LHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFV 180

Query: 181 ESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 222
           ESPALAPPEV+I++A Q +HE E+ +AA QPLPD+DDDAFE
Sbjct: 181 ESPALAPPEVQIDIALQQRHENEILEAANQPLPDDDDDAFE 221

[Close]

BLAST of Spg034163 vs. ExPASy TrEMBL
Match: A0A6J1KLG3 (GTP-binding nuclear protein OS=Cucurbita maxima OX=3661 GN=LOC111496316 PE=3 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 2.9e-125
Identity = 219/221 (99.10%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALP+QATVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNYG
Sbjct: 1   MALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFV 180

Query: 181 ESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 222
           ESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE
Sbjct: 181 ESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 221

[Close]

BLAST of Spg034163 vs. ExPASy TrEMBL
Match: A0A6J1GIL6 (GTP-binding nuclear protein OS=Cucurbita moschata OX=3662 GN=LOC111454572 PE=3 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 2.9e-125
Identity = 219/221 (99.10%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALP+QATVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNYG
Sbjct: 1   MALPSQATVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNYG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFV 180

Query: 181 ESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 222
           ESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE
Sbjct: 181 ESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 221

[Close]

BLAST of Spg034163 vs. ExPASy TrEMBL
Match: A0A068PVW7 (GTP-binding nuclear protein OS=Citrullus lanatus OX=3654 GN=CLRan2 PE=2 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 9.5e-124
Identity = 217/221 (98.19%), Postives = 219/221 (99.10%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG
Sbjct: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGN ELHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFV 180

Query: 181 ESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 222
           ESPALAPPEV+I+LA QAQHEAELAQAAAQPLPDEDDDAFE
Sbjct: 181 ESPALAPPEVQIDLAAQAQHEAELAQAAAQPLPDEDDDAFE 221

[Close]

BLAST of Spg034163 vs. ExPASy TrEMBL
Match: A0A6J1K7U8 (GTP-binding nuclear protein OS=Cucurbita maxima OX=3661 GN=LOC111491953 PE=3 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 3.6e-123
Identity = 216/221 (97.74%), Postives = 219/221 (99.10%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG
Sbjct: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTEL FV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFV 180

Query: 181 ESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 222
           ESPALAPPEV+I++A QAQHEAELAQAAAQPLPDEDDDAFE
Sbjct: 181 ESPALAPPEVQIDMAVQAQHEAELAQAAAQPLPDEDDDAFE 221

[Close]

BLAST of Spg034163 vs. ExPASy TrEMBL
Match: A0A6J1HAZ9 (GTP-binding nuclear protein OS=Cucurbita moschata OX=3662 GN=LOC111462434 PE=3 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 1.0e-122
Identity = 215/221 (97.29%), Postives = 219/221 (99.10%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQATV+YPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG
Sbjct: 1   MALPNQATVEYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTEL FV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFV 180

Query: 181 ESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 222
           ESPALAPPEV+I++A QAQHEAELAQAAAQPLPDEDDDAFE
Sbjct: 181 ESPALAPPEVQIDMAVQAQHEAELAQAAAQPLPDEDDDAFE 221

[Close]

BLAST of Spg034163 vs. TAIR 10
Match: AT5G55190.1 (RAN GTPase 3 )

HSP 1 Score: 435.6 bits (1119), Expect = 2.3e-122
Identity = 208/221 (94.12%), Postives = 213/221 (96.38%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTN G
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  LHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFV 180

Query: 181 ESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 222
           ESPALAPPEV+I+LA Q QHEAELA AA+QPLPD+DDD FE
Sbjct: 181 ESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDTFE 221

[Close]

BLAST of Spg034163 vs. TAIR 10
Match: AT5G20020.1 (RAS-related GTP-binding nuclear protein 2 )

HSP 1 Score: 431.8 bits (1109), Expect = 3.3e-121
Identity = 206/221 (93.21%), Postives = 213/221 (96.38%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTN G
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  LHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFV 180

Query: 181 ESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 222
           ESPALAPPEV +++A Q Q+EA+LA AAAQPLPD+DDDAFE
Sbjct: 181 ESPALAPPEVHLDIAAQQQNEADLAAAAAQPLPDDDDDAFE 221

[Close]

BLAST of Spg034163 vs. TAIR 10
Match: AT5G20010.1 (RAS-related nuclear protein-1 )

HSP 1 Score: 430.6 bits (1106), Expect = 7.4e-121
Identity = 205/221 (92.76%), Postives = 213/221 (96.38%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTN G
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  LHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFV 180

Query: 181 ESPALAPPEVEINLAEQAQHEAELAQAAAQPLPDEDDDAFE 222
           E+PALAPPEV I++A+Q ++EAEL QAAAQPLPD+DDD FE
Sbjct: 181 ETPALAPPEVHIDIADQQKNEAELLQAAAQPLPDDDDDIFE 221

[Close]

BLAST of Spg034163 vs. TAIR 10
Match: AT5G55080.1 (ras-related nuclear protein 4 )

HSP 1 Score: 304.7 bits (779), Expect = 6.1e-83
Identity = 145/212 (68.40%), Postives = 172/212 (81.13%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQ  VD P+FKL+IVGDGGTGKTTF+KRHLTGEFE   EPT+GV+++PLDFFTN G
Sbjct: 1   MALPNQQNVDLPTFKLLIVGDGGTGKTTFLKRHLTGEFEHNTEPTLGVDIYPLDFFTNRG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRF CWDTAGQEK+ GL+D YYIHGQCAIIMFDVTAR TY N+  W+RDL RVC+NIPI
Sbjct: 61  KIRFECWDTAGQEKYSGLKDAYYIHGQCAIIMFDVTARHTYMNIDRWYRDLRRVCKNIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFV 180
           VLCGNKVDV +RQ+K K V++HRKK LQYYE+SAK+N NFEKPFLYLAR++AG+ +L FV
Sbjct: 121 VLCGNKVDVPSRQIKPKHVSYHRKKCLQYYEMSAKNNCNFEKPFLYLARRIAGDAKLSFV 180

Query: 181 ESPALAPPEVEINLAEQAQHEAELAQAAAQPL 213
           ES     PE +I+  +    +    +A  QPL
Sbjct: 181 ES-----PEAQIDNLDVESLQLLTVEAGTQPL 207

[Close]

BLAST of Spg034163 vs. TAIR 10
Match: AT4G39890.1 (RAB GTPase homolog H1C )

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-22
Identity = 67/188 (35.64%), Postives = 98/188 (52.13%), Query Frame = 0


Query: 14  FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGKIRFYCWDTAGQE 73
           FKLV +GD   GKT+ + R +  +F+  Y+PTIG++      +     +R   WDTAGQE
Sbjct: 10  FKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69

Query: 74  KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVD-VK 133
           +F  L   Y      AI+++DV+ R T+ N   W  D+ R     N+ IVL GNK D V+
Sbjct: 70  RFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVLVGNKTDLVE 129

Query: 134 NRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFVESPALAPPE 193
            RQV   +     K+  + + E SAK N+N +  F  +A  L G      V+S +LA   
Sbjct: 130 KRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPG------VDSYSLATKS 189

Query: 194 ---VEINL 195
              V++NL
Sbjct: 190 DDMVDVNL 191

The following BLAST results are available for this feature:

BLAST of Spg034163 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022951841.1	6.1e-125	99.10	GTP-binding nuclear protein Ran-3-like [Cucurbita moschata] >XP_023002491.1 GTP-...	[more]
KAG6585456.1	6.1e-125	99.10	GTP-binding nuclear protein Ran-3, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7020371.1	2.3e-124	99.09	GTP-binding nuclear protein Ran-3, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_038884642.1	2.0e-123	98.19	GTP-binding nuclear protein Ran1A-like [Benincasa hispida] >BAP11913.1 Ran-GTPas...	[more]
XP_022996825.1	7.4e-123	97.74	GTP-binding nuclear protein Ran-3-like [Cucurbita maxima] >KAG6598587.1 GTP-bind...	[more]

BLAST of Spg034163 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H156	3.2e-121	94.12	GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana OX=3702 GN=RAN3 PE=1 S...	[more]
P41917	4.7e-120	93.21	GTP-binding nuclear protein Ran-2 OS=Arabidopsis thaliana OX=3702 GN=RAN2 PE=1 S...	[more]
P41916	1.0e-119	92.76	GTP-binding nuclear protein Ran-1 OS=Arabidopsis thaliana OX=3702 GN=RAN1 PE=1 S...	[more]
P38546	1.0e-119	93.67	GTP-binding nuclear protein Ran1 OS=Solanum lycopersicum OX=4081 GN=RAN1 PE=2 SV...	[more]
P38548	3.0e-119	92.31	GTP-binding nuclear protein Ran/TC4 OS=Vicia faba OX=3906 PE=2 SV=1	[more]

BLAST of Spg034163 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KLG3	2.9e-125	99.10	GTP-binding nuclear protein OS=Cucurbita maxima OX=3661 GN=LOC111496316 PE=3 SV=...	[more]
A0A6J1GIL6	2.9e-125	99.10	GTP-binding nuclear protein OS=Cucurbita moschata OX=3662 GN=LOC111454572 PE=3 S...	[more]
A0A068PVW7	9.5e-124	98.19	GTP-binding nuclear protein OS=Citrullus lanatus OX=3654 GN=CLRan2 PE=2 SV=1	[more]
A0A6J1K7U8	3.6e-123	97.74	GTP-binding nuclear protein OS=Cucurbita maxima OX=3661 GN=LOC111491953 PE=3 SV=...	[more]
A0A6J1HAZ9	1.0e-122	97.29	GTP-binding nuclear protein OS=Cucurbita moschata OX=3662 GN=LOC111462434 PE=3 S...	[more]

BLAST of Spg034163 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55190.1	2.3e-122	94.12	RAN GTPase 3	[more]
AT5G20020.1	3.3e-121	93.21	RAS-related GTP-binding nuclear protein 2	[more]
AT5G20010.1	7.4e-121	92.76	RAS-related nuclear protein-1	[more]
AT5G55080.1	6.1e-83	68.40	ras-related nuclear protein 4	[more]
AT4G39890.1	1.2e-22	35.64	RAB GTPase homolog H1C	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002041	Ran GTPase	PRINTS	PR00627	GTPRANTC4	coord: 74..92 score: 89.88 coord: 94..115 score: 86.19 coord: 130..148 score: 81.38 coord: 27..41 score: 95.13 coord: 168..190 score: 71.57
IPR002041	Ran GTPase	PANTHER	PTHR24071	RAN GTPASE	coord: 1..221
IPR002041	Ran GTPase	PROSITE	PS51418	RAN	coord: 7..171 score: 29.927345
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..220 e-value: 9.2E-163 score: 556.7
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..174 e-value: 4.0E-18 score: 76.2
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..174 e-value: 2.6E-28 score: 110.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..221
None	No IPR available	PANTHER	PTHR24071:SF19	GTP-BINDING NUCLEAR PROTEIN	coord: 1..221
None	No IPR available	PROSITE	PS51419	RAB	coord: 8..210 score: 19.960817
None	No IPR available	CDD	cd00877	Ran	coord: 14..179 e-value: 5.01347E-131 score: 363.93
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..170 e-value: 1.1E-8 score: -7.5
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..171 e-value: 4.1E-50 score: 169.6
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 5..205 score: 9.63636
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 14..164 e-value: 1.3E-24 score: 84.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 5..219 e-value: 5.7E-69 score: 233.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 14..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg034163.1	Spg034163.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006606	protein import into nucleus
biological_process	GO:0000054	ribosomal subunit export from nucleus
biological_process	GO:0006913	nucleocytoplasmic transport
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding