Spg034144 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg034144
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein Iojap-related, mitochondrial
Locationscaffold13: 36060595 .. 36063290 (+)
RNA-Seq ExpressionSpg034144
SyntenySpg034144
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGCGGCGCAAAGAATTCGATCTTCTTTTGCCCTCTCTTCCACGATTCGTTCTCTTCAACTATGGAACAGAGGCGTTTCTGTTCACAATCATACTCTATCTTCCTCCACCGCTAGCTCCAGCAACAAAGGTTTACTTGATCTTCAGGAGGTCGAGACGATTCTGAATAACGTGAAGGCAGACGATATCAAAGTGATACCAGTTCGCAAAGACTGTGATTGGGCTGATTACATGGTGTTTGCCACTGGTAGGTCTACCTGGCATGTTAAGAACATTGCTCAAGCCCTAATTTACAAGGCATGTTTCTTCTTTTGCATTTCTGTCTGATTTTATAGTTCTGATATTCAGTTAGATTTGAAGAAGAGAAGTTTCTGAATATTGTGGCTTAATATGTGACCGCGTTTTATTTGAATCAACAGGTCAAGCAAAAGCAGAAAGGAGCTAAACAGTTAGTACTCCCTAGTGTGGAAGGGCAAGAAGATGGAAAGTGGATTGTCATCGACTCTGGTCCGTGCTACTCTCTTCAATGAGTACTATGCATATTCTTATTCTTGAACTTTGTAGGAAACTTTCTTGCTCATAAACCAATTGTCAGTATTCTTCTAGCCTACACGTTAACGGAACACTACGGATTAATTCGATCCACAGTTCCACACATTTTGAAGTGTTGATCTTCTGCCCCTTAGCCCTCTCCGCGGGCGTTTCAATAGAGTTTATACTGTGATTTCTGCTCTTTGCAACGTCTTAAATTAGTTATTATTCGTTAAACTAGTAATTTCTTCCATAGGCTTTTCTAGAGACTAGAGAGGATAATGATAATGAAAATTATAGTAGTATTGGATTAACAAAAATTTGTGCCATAGGCTTGTCTTAATAATATAACTATCTATATATTAATCATGTTTTATGAAAAGTTCTTAATTTGATATTCTAATTGATTGCTACCAATGCGTTTATAATTTGTCTTTGAATATTTTCATTTAGGTAAAGTAGTTGTTCATGCCCTTGATGAGAACGCCAGAACTTATTACAATCTGGAGAGCCTTTGGTCTACCGAGACACCACAAAATGACTCTTCTCAGGTGAATTCTTGTTGCTTTTCTCTTTTGCCCTTGAAAAAAATAGAGGGAAGGAGCATACTTGGACATATTTTCTATTGCGCTTCTTTTCAACCTTCTTCTGTTTAAAATTTTAAATCCAAGGAACATGATTTAATCCTTCATGTGGTACATTTGCATTTTAAGCCTTGGGTTAGGTGGTTGAAATGGTAGGATAGGCTAAACTTAGAGGTGACAAATGTACACTGGTAACTTTGCTTTAGAGACGAAGACATAGTCGTGGTTAGTAATCTACATTTTAGGTACGTTTGTGATGAAGTGCTGAATGATGCTTGAATGTGAAACTTTCCCTATCAAAATATGGCATGAGATATTGACCTCCTAATTCAGCGGCAACAAGCTTGGTGAAGGAAACCGTTCTTCTCTTTCCCAGCATTTGGATGGTCTTAGCTGGCTTTCCTTTTTTTAGTTTCTTTTGACCCCGGCACTGGTTCGGGCTAAATCAAAATAATGGTTATGAGATAGGTGGCTTAAGGTTTTAGATGCAGTGACAGTAAGAGCTATTTGGTCTTGGTGCTAAATTGGGCCGAGTTAAGTAAAAACTAACTTCATATGGAGTTACAAACACACCCTCACAATTTAGCACCAAGTTAAGTAAAGACCGACTACATAGGGATCTACAACCATACCCTCACAATAATACAGCAAATTTCTAGCTCGTGCCCTTGACTAGGTGCATTGTGTCCAGTATTCGTAGGCATTGATTAGGCTACTATCTGTTAAAGGTTTGGACGATCTTGGCTAAATGCTTTTCTGTTGGGGACCCCGTCATTTTATCCCTCTCTGAATGTGTAATTCAATGTAGGTTAAATACAATTTGGGACCTTGTACTTTGGGTTTCCTTACCTTGTAGTCCCTATACTTTCAAATGTTCAATTTTAGTCATGGTACTTTGAATAAAGCTTAAAATTGTTCCCCACTGTTAGTTTGAAGTAAATTTTCATGCAATAAAAGACACAATGTGAACATATTTCCAAAATTTACAGAGAAAAGGTTAATAGCAACTAATTTTTTTTTTAGAAAAGTTGGCCCTGAATGTATGCCCTTTTAGGACCTAAAAAGTCGGGAGAGAAGCACAAAAGGAGAGAGGAAATGTCGAAAGGGGGGAAGAAGTCTAGTGCTAGTTTTGAGTGCAACTTCTTTATATAACTCTCATTTGTGAGTGGTTTCTTTGGAAAGAAAGAAATACAAGTGCCTCACGATATACTGCAAGAAAAATTATGCAATGCGCCTTTACAGAATTTGAAGTAACAATTAACAGGAGAGACCAATTTTAAGCTACTGGAATGAATTCCAAAGTAAAGTGACCAAAATGGTATTTTAACCTACAGTGTACTATTTCCGGTAGGGTGATTCCTAACTATCTGAACGGCCCTTCCTACAATTATCCTCTGGGAGACAAGACCGATGAAATTGTGCCTTTTTCTACCAAGCATTTTGCTGATTGCCGCTGCTGTGATATATTGAGTAAAATTTTGACTCAAGGAACTGAACCAAATAAGAGTAAGAGGCAACTCCCTTGACTGATATCTTGTTCTCGTCCTTGTGTAGGATTTGGACAAAGCTTTAGTGAAG

mRNA sequence

ATGTTGGCGGCGCAAAGAATTCGATCTTCTTTTGCCCTCTCTTCCACGATTCGTTCTCTTCAACTATGGAACAGAGGCGTTTCTGTTCACAATCATACTCTATCTTCCTCCACCGCTAGCTCCAGCAACAAAGGTTTACTTGATCTTCAGGAGGTCGAGACGATTCTGAATAACGTGAAGGCAGACGATATCAAAGTGATACCAGTTCGCAAAGACTGTGATTGGGCTGATTACATGGTGTTTGCCACTGGTAGGTCTACCTGGCATGTTAAGAACATTGCTCAAGCCCTAATTTACAAGGCATGTTTCTTCTTTTGCATTTCTGTCAAGCAAAAGCAGAAAGGAGCTAAACAGTTAGTACTCCCTAGTGTGGAAGGGCAAGAAGATGGAAAGTGGATTGTCATCGACTCTGGTAAAGTAGTTGTTCATGCCCTTGATGAGAACGCCAGAACTTATTACAATCTGGAGAGCCTTTGGTCTACCGAGACACCACAAAATGACTCTTCTCAGGATTTGGACAAAGCTTTAGTGAAG

Coding sequence (CDS)

ATGTTGGCGGCGCAAAGAATTCGATCTTCTTTTGCCCTCTCTTCCACGATTCGTTCTCTTCAACTATGGAACAGAGGCGTTTCTGTTCACAATCATACTCTATCTTCCTCCACCGCTAGCTCCAGCAACAAAGGTTTACTTGATCTTCAGGAGGTCGAGACGATTCTGAATAACGTGAAGGCAGACGATATCAAAGTGATACCAGTTCGCAAAGACTGTGATTGGGCTGATTACATGGTGTTTGCCACTGGTAGGTCTACCTGGCATGTTAAGAACATTGCTCAAGCCCTAATTTACAAGGCATGTTTCTTCTTTTGCATTTCTGTCAAGCAAAAGCAGAAAGGAGCTAAACAGTTAGTACTCCCTAGTGTGGAAGGGCAAGAAGATGGAAAGTGGATTGTCATCGACTCTGGTAAAGTAGTTGTTCATGCCCTTGATGAGAACGCCAGAACTTATTACAATCTGGAGAGCCTTTGGTCTACCGAGACACCACAAAATGACTCTTCTCAGGATTTGGACAAAGCTTTAGTGAAG

Protein sequence

MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKACFFFCISVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVK
Homology
[Close]
BLAST of Spg034144 vs. NCBI nr
Match: XP_038884261.1 (protein Iojap-related, mitochondrial [Benincasa hispida])

HSP 1 Score: 306.2 bits (783), Expect = 1.8e-79
Identity = 157/178 (88.20%), Postives = 165/178 (92.70%), Query Frame = 0 

Query: 1   MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVK 60
           MLAAQRI+SS A SSTIRSLQLWNRGVSVHNH LSSSTASS+NKGLLDLQEVETILNNVK
Sbjct: 1   MLAAQRIQSSSAFSSTIRSLQLWNRGVSVHNHALSSSTASSTNKGLLDLQEVETILNNVK 60

Query: 61  ADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKACFFFCISVKQKQKGAKQLV 120
           ADD+KVI VRK+CDWADYMVFATGRSTWHVKNIAQALIYK        VKQKQKGA+QLV
Sbjct: 61  ADDVKVILVRKECDWADYMVFATGRSTWHVKNIAQALIYK--------VKQKQKGARQLV 120

Query: 121 LPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVK 179
           LPSVEGQEDGKWIVIDSGKVVVHALDENAR+YYNLESLWSTETPQ+DSSQDLD+A VK
Sbjct: 121 LPSVEGQEDGKWIVIDSGKVVVHALDENARSYYNLESLWSTETPQDDSSQDLDRAFVK 170

[Close]
BLAST of Spg034144 vs. NCBI nr
Match: XP_022997359.1 (protein Iojap-related, mitochondrial [Cucurbita maxima])

HSP 1 Score: 305.1 bits (780), Expect = 4.1e-79
Identity = 156/178 (87.64%), Postives = 165/178 (92.70%), Query Frame = 0 

Query: 1   MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVK 60
           MLAAQRIRSS A+SSTIR LQLWNRGVSV NHTLSSSTASS N+GLLDLQEVETILNNVK
Sbjct: 1   MLAAQRIRSSSAISSTIRCLQLWNRGVSVRNHTLSSSTASSINEGLLDLQEVETILNNVK 60

Query: 61  ADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKACFFFCISVKQKQKGAKQLV 120
           ADD++VIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK        VKQKQKGA+QLV
Sbjct: 61  ADDVRVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK--------VKQKQKGARQLV 120

Query: 121 LPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVK 179
           LPSVEGQEDGKWIVIDSGKVVVHALDE ARTYYNLESLWST+TPQ+DSSQ+LD+ALVK
Sbjct: 121 LPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLWSTDTPQDDSSQELDRALVK 170

[Close]
BLAST of Spg034144 vs. NCBI nr
Match: XP_022961631.1 (protein Iojap-related, mitochondrial [Cucurbita moschata] >KAG6598270.1 Protein Iojap-related, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 303.1 bits (775), Expect = 1.5e-78
Identity = 155/178 (87.08%), Postives = 164/178 (92.13%), Query Frame = 0 

Query: 1   MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVK 60
           MLAAQRIRSS A+SSTIR LQLWNRGVSV NHTLSSSTASS  +GLLDLQEVETILNNVK
Sbjct: 1   MLAAQRIRSSSAISSTIRCLQLWNRGVSVRNHTLSSSTASSIKEGLLDLQEVETILNNVK 60

Query: 61  ADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKACFFFCISVKQKQKGAKQLV 120
           ADD++VIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK        VKQKQKGA+QLV
Sbjct: 61  ADDVRVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK--------VKQKQKGARQLV 120

Query: 121 LPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVK 179
           LPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWS +TPQ+DSSQ+LD+ALVK
Sbjct: 121 LPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSADTPQDDSSQELDRALVK 170

[Close]
BLAST of Spg034144 vs. NCBI nr
Match: KAG7029243.1 (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 302.4 bits (773), Expect = 2.6e-78
Identity = 155/178 (87.08%), Postives = 164/178 (92.13%), Query Frame = 0 

Query: 1   MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVK 60
           MLAAQRIRSS A+SSTIR LQLWNRGVSV NHTLSSSTASS  +GLLDLQEVETILNNVK
Sbjct: 1   MLAAQRIRSSSAISSTIRCLQLWNRGVSVGNHTLSSSTASSIKEGLLDLQEVETILNNVK 60

Query: 61  ADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKACFFFCISVKQKQKGAKQLV 120
           ADD++VIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK        VKQKQKGA+QLV
Sbjct: 61  ADDVRVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK--------VKQKQKGARQLV 120

Query: 121 LPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVK 179
           LPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWS +TPQ+DSSQ+LD+ALVK
Sbjct: 121 LPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSADTPQDDSSQELDRALVK 170

[Close]
BLAST of Spg034144 vs. NCBI nr
Match: XP_022131306.1 (protein Iojap-related, mitochondrial [Momordica charantia])

HSP 1 Score: 301.6 bits (771), Expect = 4.5e-78
Identity = 151/178 (84.83%), Postives = 162/178 (91.01%), Query Frame = 0 

Query: 1   MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVK 60
           ML AQRIRSS A SSTIRSLQ WN+G+ VHNHT+SSSTASSSN GLLDLQEVET+LNNVK
Sbjct: 1   MLVAQRIRSSSAFSSTIRSLQQWNKGIFVHNHTVSSSTASSSNNGLLDLQEVETVLNNVK 60

Query: 61  ADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKACFFFCISVKQKQKGAKQLV 120
           ADD+KVIP+RKDCDWADYMVFATGRSTWHVKNIAQALIYK        +KQKQKGA+QL+
Sbjct: 61  ADDVKVIPIRKDCDWADYMVFATGRSTWHVKNIAQALIYK--------IKQKQKGARQLI 120

Query: 121 LPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVK 179
           LPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTET  +DSSQDLD+ALVK
Sbjct: 121 LPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETAPDDSSQDLDRALVK 170

[Close]
BLAST of Spg034144 vs. ExPASy Swiss-Prot
Match: Q9CAF9 (Protein Iojap-related, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g67620 PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 6.8e-37
Identity = 92/179 (51.40%), Postives = 115/179 (64.25%), Query Frame = 0 

Query: 1   MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVK 60
           ML   R R S  L +  +S +L    +   + + SSS   S+   +L L EVE IL +VK
Sbjct: 1   MLTTLRSRCSSLLLN--QSWKLAPNRIFASSPSFSSSAGISNVSEILTLPEVEKILADVK 60

Query: 61  ADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKACFFFCISVKQKQKGAKQLV 120
           AD++ VIP    C WAD+ V ATGRS WH++NIAQAL+Y+A        KQKQKGAK ++
Sbjct: 61  ADNVTVIPTHNHCFWADFTVIATGRSDWHLRNIAQALVYRA--------KQKQKGAKHVM 120

Query: 121 LPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSS-QDLDKALVK 179
           LPSV+G  + KWIVID GK VVHALDE AR Y+NLESLWS E+   D+S QDL    VK
Sbjct: 121 LPSVQGY-NSKWIVIDYGKFVVHALDEKARGYFNLESLWSAESSGTDTSDQDLQNVFVK 168

[Close]
BLAST of Spg034144 vs. ExPASy Swiss-Prot
Match: Q02SH2 (Ribosomal silencing factor RsfS OS=Pseudomonas aeruginosa (strain UCBPP-PA14) OX=208963 GN=rsfS PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.9e-11
Identity = 40/104 (38.46%), Postives = 55/104 (52.88%), Query Frame = 0 

Query: 56  LNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKACFFFCISVKQKQKG 115
           L ++KA DI  + VR      DYMV A G S+  VK++A  ++ KA          K+ G
Sbjct: 14  LEDLKAQDIVTLDVRDKTSVTDYMVIACGSSSRQVKSLADNVLTKA----------KENG 73

Query: 116 AKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLW 160
            K L     EG E G+W ++D G VVVH +    R +Y+LE LW
Sbjct: 74  VKPL---GSEGLESGEWALLDLGDVVVHVMLPATRQFYDLERLW 104

[Close]
BLAST of Spg034144 vs. ExPASy Swiss-Prot
Match: P0AAT7 (Ribosomal silencing factor RsfS OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=rsfS PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 7.1e-10
Identity = 36/105 (34.29%), Postives = 54/105 (51.43%), Query Frame = 0 

Query: 56  LNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKACFFFCISVKQKQKG 115
           ++++K  DI  + V+      D M+  TG S+ HV +IA  ++            Q+ + 
Sbjct: 14  IDDLKGQDIIALDVQGKSSITDCMIICTGTSSRHVMSIADHVV------------QESRA 73

Query: 116 AKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWS 161
           A  L L  VEG+    WIV+D G V+VH + E +R  Y LE LWS
Sbjct: 74  AGLLPL-GVEGENSADWIVVDLGDVIVHVMQEESRRLYELEKLWS 105

[Close]
BLAST of Spg034144 vs. ExPASy Swiss-Prot
Match: P0AAT6 (Ribosomal silencing factor RsfS OS=Escherichia coli (strain K12) OX=83333 GN=rsfS PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 7.1e-10
Identity = 36/105 (34.29%), Postives = 54/105 (51.43%), Query Frame = 0 

Query: 56  LNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKACFFFCISVKQKQKG 115
           ++++K  DI  + V+      D M+  TG S+ HV +IA  ++            Q+ + 
Sbjct: 14  IDDLKGQDIIALDVQGKSSITDCMIICTGTSSRHVMSIADHVV------------QESRA 73

Query: 116 AKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWS 161
           A  L L  VEG+    WIV+D G V+VH + E +R  Y LE LWS
Sbjct: 74  AGLLPL-GVEGENSADWIVVDLGDVIVHVMQEESRRLYELEKLWS 105

[Close]
BLAST of Spg034144 vs. ExPASy Swiss-Prot
Match: P0AAT8 (Ribosomal silencing factor RsfS OS=Shigella flexneri OX=623 GN=rsfS PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 7.1e-10
Identity = 36/105 (34.29%), Postives = 54/105 (51.43%), Query Frame = 0 

Query: 56  LNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKACFFFCISVKQKQKG 115
           ++++K  DI  + V+      D M+  TG S+ HV +IA  ++            Q+ + 
Sbjct: 14  IDDLKGQDIIALDVQGKSSITDCMIICTGTSSRHVMSIADHVV------------QESRA 73

Query: 116 AKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWS 161
           A  L L  VEG+    WIV+D G V+VH + E +R  Y LE LWS
Sbjct: 74  AGLLPL-GVEGENSADWIVVDLGDVIVHVMQEESRRLYELEKLWS 105

[Close]
BLAST of Spg034144 vs. ExPASy TrEMBL
Match: A0A6J1KB66 (protein Iojap-related, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111492299 PE=3 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.0e-79
Identity = 156/178 (87.64%), Postives = 165/178 (92.70%), Query Frame = 0 

Query: 1   MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVK 60
           MLAAQRIRSS A+SSTIR LQLWNRGVSV NHTLSSSTASS N+GLLDLQEVETILNNVK
Sbjct: 1   MLAAQRIRSSSAISSTIRCLQLWNRGVSVRNHTLSSSTASSINEGLLDLQEVETILNNVK 60

Query: 61  ADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKACFFFCISVKQKQKGAKQLV 120
           ADD++VIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK        VKQKQKGA+QLV
Sbjct: 61  ADDVRVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK--------VKQKQKGARQLV 120

Query: 121 LPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVK 179
           LPSVEGQEDGKWIVIDSGKVVVHALDE ARTYYNLESLWST+TPQ+DSSQ+LD+ALVK
Sbjct: 121 LPSVEGQEDGKWIVIDSGKVVVHALDEKARTYYNLESLWSTDTPQDDSSQELDRALVK 170

[Close]
BLAST of Spg034144 vs. ExPASy TrEMBL
Match: A0A6J1HAW7 (protein Iojap-related, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111462348 PE=3 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 7.5e-79
Identity = 155/178 (87.08%), Postives = 164/178 (92.13%), Query Frame = 0 

Query: 1   MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVK 60
           MLAAQRIRSS A+SSTIR LQLWNRGVSV NHTLSSSTASS  +GLLDLQEVETILNNVK
Sbjct: 1   MLAAQRIRSSSAISSTIRCLQLWNRGVSVRNHTLSSSTASSIKEGLLDLQEVETILNNVK 60

Query: 61  ADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKACFFFCISVKQKQKGAKQLV 120
           ADD++VIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK        VKQKQKGA+QLV
Sbjct: 61  ADDVRVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK--------VKQKQKGARQLV 120

Query: 121 LPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVK 179
           LPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWS +TPQ+DSSQ+LD+ALVK
Sbjct: 121 LPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSADTPQDDSSQELDRALVK 170

[Close]
BLAST of Spg034144 vs. ExPASy TrEMBL
Match: A0A6J1BP74 (protein Iojap-related, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111004570 PE=3 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.2e-78
Identity = 151/178 (84.83%), Postives = 162/178 (91.01%), Query Frame = 0 

Query: 1   MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVK 60
           ML AQRIRSS A SSTIRSLQ WN+G+ VHNHT+SSSTASSSN GLLDLQEVET+LNNVK
Sbjct: 1   MLVAQRIRSSSAFSSTIRSLQQWNKGIFVHNHTVSSSTASSSNNGLLDLQEVETVLNNVK 60

Query: 61  ADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKACFFFCISVKQKQKGAKQLV 120
           ADD+KVIP+RKDCDWADYMVFATGRSTWHVKNIAQALIYK        +KQKQKGA+QL+
Sbjct: 61  ADDVKVIPIRKDCDWADYMVFATGRSTWHVKNIAQALIYK--------IKQKQKGARQLI 120

Query: 121 LPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVK 179
           LPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTET  +DSSQDLD+ALVK
Sbjct: 121 LPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETAPDDSSQDLDRALVK 170

[Close]
BLAST of Spg034144 vs. ExPASy TrEMBL
Match: A0A1S3BB26 (protein Iojap-related, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103487755 PE=3 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.4e-77
Identity = 153/178 (85.96%), Postives = 162/178 (91.01%), Query Frame = 0 

Query: 1   MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVK 60
           MLAAQRIRSS A SSTIR LQLWNRGVSVH+H LSSST+SS +K LLDLQEVETILN VK
Sbjct: 1   MLAAQRIRSSSAFSSTIRFLQLWNRGVSVHSHALSSSTSSSPDKSLLDLQEVETILNKVK 60

Query: 61  ADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKACFFFCISVKQKQKGAKQLV 120
           ADD+KVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK        VKQKQKGAKQLV
Sbjct: 61  ADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK--------VKQKQKGAKQLV 120

Query: 121 LPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVK 179
           LPSVEGQE+GKWIVIDSGKVVVHALDENAR+YYNLESLWSTETP +DS+QDLD+ALVK
Sbjct: 121 LPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWSTETPPDDSAQDLDRALVK 170

[Close]
BLAST of Spg034144 vs. ExPASy TrEMBL
Match: A0A5A7UYH0 (Protein Iojap-related OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001580 PE=3 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.2e-76
Identity = 152/178 (85.39%), Postives = 161/178 (90.45%), Query Frame = 0 

Query: 1   MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVK 60
           MLAAQRIR S A SSTIR LQLWNRGVSVH+H LSSST+SS +K LLDLQEVETILN VK
Sbjct: 1   MLAAQRIRYSSAFSSTIRFLQLWNRGVSVHSHALSSSTSSSPDKSLLDLQEVETILNKVK 60

Query: 61  ADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKACFFFCISVKQKQKGAKQLV 120
           ADD+KVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK        VKQKQKGAKQLV
Sbjct: 61  ADDVKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK--------VKQKQKGAKQLV 120

Query: 121 LPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVK 179
           LPSVEGQE+GKWIVIDSGKVVVHALDENAR+YYNLESLWSTETP +DS+QDLD+ALVK
Sbjct: 121 LPSVEGQEEGKWIVIDSGKVVVHALDENARSYYNLESLWSTETPPDDSAQDLDRALVK 170

[Close]
BLAST of Spg034144 vs. TAIR 10
Match: AT1G67620.1 (Lojap-related protein )

HSP 1 Score: 155.2 bits (391), Expect = 4.8e-38
Identity = 92/179 (51.40%), Postives = 115/179 (64.25%), Query Frame = 0 

Query: 1   MLAAQRIRSSFALSSTIRSLQLWNRGVSVHNHTLSSSTASSSNKGLLDLQEVETILNNVK 60
           ML   R R S  L +  +S +L    +   + + SSS   S+   +L L EVE IL +VK
Sbjct: 1   MLTTLRSRCSSLLLN--QSWKLAPNRIFASSPSFSSSAGISNVSEILTLPEVEKILADVK 60

Query: 61  ADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKACFFFCISVKQKQKGAKQLV 120
           AD++ VIP    C WAD+ V ATGRS WH++NIAQAL+Y+A        KQKQKGAK ++
Sbjct: 61  ADNVTVIPTHNHCFWADFTVIATGRSDWHLRNIAQALVYRA--------KQKQKGAKHVM 120

Query: 121 LPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSS-QDLDKALVK 179
           LPSV+G  + KWIVID GK VVHALDE AR Y+NLESLWS E+   D+S QDL    VK
Sbjct: 121 LPSVQGY-NSKWIVIDYGKFVVHALDEKARGYFNLESLWSAESSGTDTSDQDLQNVFVK 168

[Close]
BLAST of Spg034144 vs. TAIR 10
Match: AT3G12930.1 (Lojap-related protein )

HSP 1 Score: 47.0 bits (110), Expect = 1.9e-05
Identity = 36/124 (29.03%), Postives = 55/124 (44.35%), Query Frame = 0 

Query: 51  EVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKACFFFCISVK 110
           E+  + ++VKA DIKV+ V+    W  + + AT  S   +  I   +         ++ K
Sbjct: 126 ELAKVASDVKAGDIKVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRM-------RDLAEK 185

Query: 111 QKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWST----ETPQN 170
           +  K A   V P+        W ++D G VV+H      RT+YNLE  +      E P  
Sbjct: 186 KYGKVANGDVKPN-------SWTLLDFGDVVIHLFLPPQRTFYNLEDFYGNAMQIELPFE 235

The following BLAST results are available for this feature:
BLAST of Spg034144 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038884261.11.8e-7988.20protein Iojap-related, mitochondrial [Benincasa hispida][more]
XP_022997359.14.1e-7987.64protein Iojap-related, mitochondrial [Cucurbita maxima][more]
XP_022961631.11.5e-7887.08protein Iojap-related, mitochondrial [Cucurbita moschata] >KAG6598270.1 Protein ... [more]
KAG7029243.12.6e-7887.083-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic [Cucurbita argyrosperm... [more]
XP_022131306.14.5e-7884.83protein Iojap-related, mitochondrial [Momordica charantia][more]
BLAST of Spg034144 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9CAF96.8e-3751.40Protein Iojap-related, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g6762... [more]
Q02SH24.9e-1138.46Ribosomal silencing factor RsfS OS=Pseudomonas aeruginosa (strain UCBPP-PA14) OX... [more]
P0AAT77.1e-1034.29Ribosomal silencing factor RsfS OS=Escherichia coli O6:H1 (strain CFT073 / ATCC ... [more]
P0AAT67.1e-1034.29Ribosomal silencing factor RsfS OS=Escherichia coli (strain K12) OX=83333 GN=rsf... [more]
P0AAT87.1e-1034.29Ribosomal silencing factor RsfS OS=Shigella flexneri OX=623 GN=rsfS PE=3 SV=1[more]
BLAST of Spg034144 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KB662.0e-7987.64protein Iojap-related, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111492299... [more]
A0A6J1HAW77.5e-7987.08protein Iojap-related, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC1114623... [more]
A0A6J1BP742.2e-7884.83protein Iojap-related, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111004... [more]
A0A1S3BB262.4e-7785.96protein Iojap-related, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103487755 PE=... [more]
A0A5A7UYH01.2e-7685.39Protein Iojap-related OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold50... [more]
BLAST of Spg034144 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G67620.14.8e-3851.40Lojap-related protein [more]
AT3G12930.11.9e-0529.03Lojap-related protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043519Nucleotidyltransferase superfamilyGENE3D3.30.460.10Beta Polymerase, domain 2coord: 47..173
e-value: 1.8E-31
score: 110.2
IPR043519Nucleotidyltransferase superfamilySUPERFAMILY81301Nucleotidyltransferasecoord: 51..163
NoneNo IPR availablePFAMPF02410RsfScoord: 51..159
e-value: 2.0E-24
score: 85.9
NoneNo IPR availablePANTHERPTHR21043:SF0MITOCHONDRIAL ASSEMBLY OF RIBOSOMAL LARGE SUBUNIT PROTEIN 1coord: 32..177
IPR004394Protein Iojap/ribosomal silencing factor RsfSTIGRFAMTIGR00090TIGR00090coord: 50..159
e-value: 4.8E-23
score: 79.2
IPR004394Protein Iojap/ribosomal silencing factor RsfSPANTHERPTHR21043IOJAP SUPERFAMILY ORTHOLOGcoord: 32..177
IPR004394Protein Iojap/ribosomal silencing factor RsfSHAMAPMF_01477Iojap_RsfScoord: 42..160
score: 19.706678

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg034144.1Spg034144.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090071 negative regulation of ribosome biogenesis
biological_process GO:0017148 negative regulation of translation
molecular_function GO:0043023 ribosomal large subunit binding