Spg034087 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg034087
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	methyl-CpG-binding domain-containing protein 8-like
Location	scaffold13: 34436429 .. 34437037 (+)
RNA-Seq Expression	Spg034087
Synteny	Spg034087

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATACTCTCCCCATCATAGATCTCCGCCTCCTCTCCCAATCCGAGCTCTATTGTCTCTCTCGTTTCTCCTCCTCGTCTTCTTCTTCCTCAACCTCCCAATCCAACAACGACGACGACGTTCTCATCCCCAAAATTGATCGATCTGTCTTCAACGAGTCCGCCGGTAGCCGGAAACAAACCTATTCCCGCCTCCGTCTCGCCCCTCGCAAACCCCAATTTCCCTCCTCCTCCTCCTCCTCCACAATTCGCCCCCAATCCCCTGACCGCCTCGATGTAGAGAGCGCCCAGATTATTACTCTCTTCAAGCAGCTCTTCGTTGGGGAATCTCATTGTGCCGTCAACGACACCTACGACGATGGAGATGAGGACCTGGTCCTTATCAACCACATTTACGATGAATCGGTACCTGATTCTTCCTACGCGATTTTCCAGAGCATTCCTGTTGATATCATCGACAGCAGTTACGCTCCGATTAAGCGGCGGAGAGGGCGGCCGCGGAAGGATGGCAATCGGTTTGCTCAGAGTAATGGAAATGCGGCTCCGAACTCCAAAAGCGGATGCGAAAAACGGGCGGAGGAGGAGGAGATCGTAATGGTAATGCTGTGA

mRNA sequence

ATGAATACTCTCCCCATCATAGATCTCCGCCTCCTCTCCCAATCCGAGCTCTATTGTCTCTCTCGTTTCTCCTCCTCGTCTTCTTCTTCCTCAACCTCCCAATCCAACAACGACGACGACGTTCTCATCCCCAAAATTGATCGATCTGTCTTCAACGAGTCCGCCGGTAGCCGGAAACAAACCTATTCCCGCCTCCGTCTCGCCCCTCGCAAACCCCAATTTCCCTCCTCCTCCTCCTCCTCCACAATTCGCCCCCAATCCCCTGACCGCCTCGATGTAGAGAGCGCCCAGATTATTACTCTCTTCAAGCAGCTCTTCGTTGGGGAATCTCATTGTGCCGTCAACGACACCTACGACGATGGAGATGAGGACCTGGTCCTTATCAACCACATTTACGATGAATCGGTACCTGATTCTTCCTACGCGATTTTCCAGAGCATTCCTGTTGATATCATCGACAGCAGTTACGCTCCGATTAAGCGGCGGAGAGGGCGGCCGCGGAAGGATGGCAATCGGTTTGCTCAGAGTAATGGAAATGCGGCTCCGAACTCCAAAAGCGGATGCGAAAAACGGGCGGAGGAGGAGGAGATCGTAATGGTAATGCTGTGA

Coding sequence (CDS)

ATGAATACTCTCCCCATCATAGATCTCCGCCTCCTCTCCCAATCCGAGCTCTATTGTCTCTCTCGTTTCTCCTCCTCGTCTTCTTCTTCCTCAACCTCCCAATCCAACAACGACGACGACGTTCTCATCCCCAAAATTGATCGATCTGTCTTCAACGAGTCCGCCGGTAGCCGGAAACAAACCTATTCCCGCCTCCGTCTCGCCCCTCGCAAACCCCAATTTCCCTCCTCCTCCTCCTCCTCCACAATTCGCCCCCAATCCCCTGACCGCCTCGATGTAGAGAGCGCCCAGATTATTACTCTCTTCAAGCAGCTCTTCGTTGGGGAATCTCATTGTGCCGTCAACGACACCTACGACGATGGAGATGAGGACCTGGTCCTTATCAACCACATTTACGATGAATCGGTACCTGATTCTTCCTACGCGATTTTCCAGAGCATTCCTGTTGATATCATCGACAGCAGTTACGCTCCGATTAAGCGGCGGAGAGGGCGGCCGCGGAAGGATGGCAATCGGTTTGCTCAGAGTAATGGAAATGCGGCTCCGAACTCCAAAAGCGGATGCGAAAAACGGGCGGAGGAGGAGGAGATCGTAATGGTAATGCTGTGA

Protein sequence

MNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIITLFKQLFVGESHCAVNDTYDDGDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDGNRFAQSNGNAAPNSKSGCEKRAEEEEIVMVML

Homology

[Close]

BLAST of Spg034087 vs. NCBI nr
Match: XP_023002677.1 (methyl-CpG-binding domain-containing protein 8-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 349.7 bits (896), Expect = 1.6e-92
Identity = 185/202 (91.58%), Postives = 192/202 (95.05%), Query Frame = 0


Query: 1   MNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIPKIDRSVFNESAGSRKQ 60
           MNTLPIIDLRLLSQSELYCLSRF SSSSSSS SQSNNDDDVLIPKIDRSVFNESAGSRKQ
Sbjct: 17  MNTLPIIDLRLLSQSELYCLSRF-SSSSSSSMSQSNNDDDVLIPKIDRSVFNESAGSRKQ 76

Query: 61  TYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIITLFKQLFVGESHCAVNDTYDD 120
           TYSRLRLAPRK QFPSSSSSSTIRPQSPDR D ESA+I+TLFKQLFVGESHC VND+YDD
Sbjct: 77  TYSRLRLAPRKSQFPSSSSSSTIRPQSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDD 136

Query: 121 GDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDGNRFAQSNGNA 180
           GDEDLVL+NHIYDESVP+SSYAIF SIPVDIIDSSYAPIKRRRGRPRKD NRFAQSNGNA
Sbjct: 137 GDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNA 196

Query: 181 APNSKSGCEKRAEEEEIVMVML 203
           A NS SGC+KRAEE+EIVMVML
Sbjct: 197 AANSISGCDKRAEEDEIVMVML 217

[Close]

BLAST of Spg034087 vs. NCBI nr
Match: XP_022952018.1 (methyl-CpG-binding domain-containing protein 8-like isoform X2 [Cucurbita moschata] >XP_023538587.1 methyl-CpG-binding domain-containing protein 8-like isoform X2 [Cucurbita pepo subsp. pepo] >KAG7020217.1 Methyl-CpG-binding domain-containing protein 8, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 349.7 bits (896), Expect = 1.6e-92
Identity = 185/202 (91.58%), Postives = 192/202 (95.05%), Query Frame = 0


Query: 1   MNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIPKIDRSVFNESAGSRKQ 60
           MNTLPIIDLRLLSQSELYCLSRF SSSSSSS SQSNNDDDVLIPKIDRSVFNESAGSRKQ
Sbjct: 17  MNTLPIIDLRLLSQSELYCLSRF-SSSSSSSISQSNNDDDVLIPKIDRSVFNESAGSRKQ 76

Query: 61  TYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIITLFKQLFVGESHCAVNDTYDD 120
           TYSRLRLAPRK QFPSSSSSSTIRPQSPDR D ESA+I+TLFKQLFVGESHC VND+YDD
Sbjct: 77  TYSRLRLAPRKSQFPSSSSSSTIRPQSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDD 136

Query: 121 GDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDGNRFAQSNGNA 180
           GDEDLVL+NHIYDESVP+SSYAIF SIPVDIIDSSYAPIKRRRGRPRKD NRFAQSNGNA
Sbjct: 137 GDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNA 196

Query: 181 APNSKSGCEKRAEEEEIVMVML 203
           A NS SGC+KRAEE+EIVMVML
Sbjct: 197 AANSISGCDKRAEEDEIVMVML 217

[Close]

BLAST of Spg034087 vs. NCBI nr
Match: XP_022132084.1 (methyl-CpG-binding domain-containing protein 8 isoform X2 [Momordica charantia])

HSP 1 Score: 348.6 bits (893), Expect = 3.6e-92
Identity = 185/202 (91.58%), Postives = 192/202 (95.05%), Query Frame = 0


Query: 1   MNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIPKIDRSVFNESAGSRKQ 60
           MNTLPIIDLRLLSQSELYCLSRF  SSSSSSTSQSN+DDDVLIPKIDRSVFNESAGSRKQ
Sbjct: 17  MNTLPIIDLRLLSQSELYCLSRF--SSSSSSTSQSNDDDDVLIPKIDRSVFNESAGSRKQ 76

Query: 61  TYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIITLFKQLFVGESHCAVNDTYDD 120
           TYSRLRLAPRKPQFPSSSSSS IRPQSP+RLD ESA+IITLFKQLFVG+SHC V+++Y D
Sbjct: 77  TYSRLRLAPRKPQFPSSSSSSVIRPQSPERLDAESAKIITLFKQLFVGDSHCTVDNSYGD 136

Query: 121 GDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDGNRFAQSNGNA 180
            DEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKD NRF QSNGNA
Sbjct: 137 EDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDSNRFPQSNGNA 196

Query: 181 APNSKSGCEKRAEEEEIVMVML 203
            PNSKSGCEKRAEEEEIVMVML
Sbjct: 197 VPNSKSGCEKRAEEEEIVMVML 216

[Close]

BLAST of Spg034087 vs. NCBI nr
Match: XP_038885026.1 (methyl-CpG-binding domain-containing protein 8 isoform X2 [Benincasa hispida])

HSP 1 Score: 345.9 bits (886), Expect = 2.4e-91
Identity = 187/209 (89.47%), Postives = 193/209 (92.34%), Query Frame = 0


Query: 1   MNTLPIIDLRLLSQSELYCLSRF-SSSSSSSSTSQSNNDDDVLIPKIDRSVFNESAGSRK 60
           MN LPIIDLRLLSQSELYCLSRF SSSSSSSSTSQSNN+DDVLIPKIDRSVFNESAGSRK
Sbjct: 17  MNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSTSQSNNEDDVLIPKIDRSVFNESAGSRK 76

Query: 61  QTYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIITLFKQLFVGESHCAVNDTYD 120
           QTYSRLRLAPRKPQF SSSSSSTIRPQSPDRLD ESAQI+TLFKQLFVG+ HCAVND+Y 
Sbjct: 77  QTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLFKQLFVGDPHCAVNDSYG 136

Query: 121 DGDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDGNRFAQSNGN 180
           DGDEDLVL+NHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKD NRFAQSNGN
Sbjct: 137 DGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGN 196

Query: 181 AAPNSKSGCEKRA------EEEEIVMVML 203
           AAP  KSGC+K A      EEEEIVMVML
Sbjct: 197 AAPEFKSGCDKPAAAAAEEEEEEIVMVML 225

[Close]

BLAST of Spg034087 vs. NCBI nr
Match: XP_022952017.1 (methyl-CpG-binding domain-containing protein 8-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 344.7 bits (883), Expect = 5.2e-91
Identity = 182/199 (91.46%), Postives = 189/199 (94.97%), Query Frame = 0


Query: 1   MNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIPKIDRSVFNESAGSRKQ 60
           MNTLPIIDLRLLSQSELYCLSRF SSSSSSS SQSNNDDDVLIPKIDRSVFNESAGSRKQ
Sbjct: 17  MNTLPIIDLRLLSQSELYCLSRF-SSSSSSSISQSNNDDDVLIPKIDRSVFNESAGSRKQ 76

Query: 61  TYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIITLFKQLFVGESHCAVNDTYDD 120
           TYSRLRLAPRK QFPSSSSSSTIRPQSPDR D ESA+I+TLFKQLFVGESHC VND+YDD
Sbjct: 77  TYSRLRLAPRKSQFPSSSSSSTIRPQSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDD 136

Query: 121 GDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDGNRFAQSNGNA 180
           GDEDLVL+NHIYDESVP+SSYAIF SIPVDIIDSSYAPIKRRRGRPRKD NRFAQSNGNA
Sbjct: 137 GDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNA 196

Query: 181 APNSKSGCEKRAEEEEIVM 200
           A NS SGC+KRAEE+EIVM
Sbjct: 197 AANSISGCDKRAEEDEIVM 214

[Close]

BLAST of Spg034087 vs. ExPASy Swiss-Prot
Match: Q9LME6 (Methyl-CpG-binding domain-containing protein 8 OS=Arabidopsis thaliana OX=3702 GN=MBD8 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.6e-18
Identity = 81/177 (45.76%), Postives = 104/177 (58.76%), Query Frame = 0


Query: 3   TLPIIDLRLLSQSELYCLSRFSSSSSSSSTS--QSNNDDDVLIPKIDRSVFNESAGSRKQ 62
           +LP+ID RLLSQSEL  LS+ SS S SSS S   S   DD L PKIDRSVFNESAGSRKQ
Sbjct: 25  SLPLIDTRLLSQSELRALSQCSSLSPSSSASLAASAGGDDDLTPKIDRSVFNESAGSRKQ 84

Query: 63  TYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIITLFKQLFVGESHCAVNDTYDD 122
           T+ RLRLA R PQ P    S   + Q  D    E  Q+ +L + LF  +S+ +  +  D+
Sbjct: 85  TFLRLRLA-RHPQPPEEPPSP--QRQRDDSSREEQTQVASLLRSLFNVDSNQS-KEEEDE 144

Query: 123 GDEDLVLINHIYDESVPDSSYAIFQSIPVDIID------SSYAPIKRRRGRPRKDGN 172
           G+E+L       +  +  +SY ++Q   +D I       +S   IKR+RGRPRK  N
Sbjct: 145 GEEEL----EDNEGQIHYNSY-VYQRPNLDSIQNVLIQGTSGNKIKRKRGRPRKIRN 192

[Close]

BLAST of Spg034087 vs. ExPASy TrEMBL
Match: A0A6J1KK67 (methyl-CpG-binding domain-containing protein 8-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496461 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 7.9e-93
Identity = 185/202 (91.58%), Postives = 192/202 (95.05%), Query Frame = 0


Query: 1   MNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIPKIDRSVFNESAGSRKQ 60
           MNTLPIIDLRLLSQSELYCLSRF SSSSSSS SQSNNDDDVLIPKIDRSVFNESAGSRKQ
Sbjct: 17  MNTLPIIDLRLLSQSELYCLSRF-SSSSSSSMSQSNNDDDVLIPKIDRSVFNESAGSRKQ 76

Query: 61  TYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIITLFKQLFVGESHCAVNDTYDD 120
           TYSRLRLAPRK QFPSSSSSSTIRPQSPDR D ESA+I+TLFKQLFVGESHC VND+YDD
Sbjct: 77  TYSRLRLAPRKSQFPSSSSSSTIRPQSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDD 136

Query: 121 GDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDGNRFAQSNGNA 180
           GDEDLVL+NHIYDESVP+SSYAIF SIPVDIIDSSYAPIKRRRGRPRKD NRFAQSNGNA
Sbjct: 137 GDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNA 196

Query: 181 APNSKSGCEKRAEEEEIVMVML 203
           A NS SGC+KRAEE+EIVMVML
Sbjct: 197 AANSISGCDKRAEEDEIVMVML 217

[Close]

BLAST of Spg034087 vs. ExPASy TrEMBL
Match: A0A6J1GJB3 (methyl-CpG-binding domain-containing protein 8-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111454729 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 7.9e-93
Identity = 185/202 (91.58%), Postives = 192/202 (95.05%), Query Frame = 0


Query: 1   MNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIPKIDRSVFNESAGSRKQ 60
           MNTLPIIDLRLLSQSELYCLSRF SSSSSSS SQSNNDDDVLIPKIDRSVFNESAGSRKQ
Sbjct: 17  MNTLPIIDLRLLSQSELYCLSRF-SSSSSSSISQSNNDDDVLIPKIDRSVFNESAGSRKQ 76

Query: 61  TYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIITLFKQLFVGESHCAVNDTYDD 120
           TYSRLRLAPRK QFPSSSSSSTIRPQSPDR D ESA+I+TLFKQLFVGESHC VND+YDD
Sbjct: 77  TYSRLRLAPRKSQFPSSSSSSTIRPQSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDD 136

Query: 121 GDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDGNRFAQSNGNA 180
           GDEDLVL+NHIYDESVP+SSYAIF SIPVDIIDSSYAPIKRRRGRPRKD NRFAQSNGNA
Sbjct: 137 GDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNA 196

Query: 181 APNSKSGCEKRAEEEEIVMVML 203
           A NS SGC+KRAEE+EIVMVML
Sbjct: 197 AANSISGCDKRAEEDEIVMVML 217

[Close]

BLAST of Spg034087 vs. ExPASy TrEMBL
Match: A0A6J1BS27 (methyl-CpG-binding domain-containing protein 8 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111005043 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.8e-92
Identity = 185/202 (91.58%), Postives = 192/202 (95.05%), Query Frame = 0


Query: 1   MNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIPKIDRSVFNESAGSRKQ 60
           MNTLPIIDLRLLSQSELYCLSRF  SSSSSSTSQSN+DDDVLIPKIDRSVFNESAGSRKQ
Sbjct: 17  MNTLPIIDLRLLSQSELYCLSRF--SSSSSSTSQSNDDDDVLIPKIDRSVFNESAGSRKQ 76

Query: 61  TYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIITLFKQLFVGESHCAVNDTYDD 120
           TYSRLRLAPRKPQFPSSSSSS IRPQSP+RLD ESA+IITLFKQLFVG+SHC V+++Y D
Sbjct: 77  TYSRLRLAPRKPQFPSSSSSSVIRPQSPERLDAESAKIITLFKQLFVGDSHCTVDNSYGD 136

Query: 121 GDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDGNRFAQSNGNA 180
            DEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKD NRF QSNGNA
Sbjct: 137 EDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDSNRFPQSNGNA 196

Query: 181 APNSKSGCEKRAEEEEIVMVML 203
            PNSKSGCEKRAEEEEIVMVML
Sbjct: 197 VPNSKSGCEKRAEEEEIVMVML 216

[Close]

BLAST of Spg034087 vs. ExPASy TrEMBL
Match: A0A6J1KLZ0 (methyl-CpG-binding domain-containing protein 8-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496461 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.5e-91
Identity = 182/199 (91.46%), Postives = 189/199 (94.97%), Query Frame = 0


Query: 1   MNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIPKIDRSVFNESAGSRKQ 60
           MNTLPIIDLRLLSQSELYCLSRF SSSSSSS SQSNNDDDVLIPKIDRSVFNESAGSRKQ
Sbjct: 17  MNTLPIIDLRLLSQSELYCLSRF-SSSSSSSMSQSNNDDDVLIPKIDRSVFNESAGSRKQ 76

Query: 61  TYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIITLFKQLFVGESHCAVNDTYDD 120
           TYSRLRLAPRK QFPSSSSSSTIRPQSPDR D ESA+I+TLFKQLFVGESHC VND+YDD
Sbjct: 77  TYSRLRLAPRKSQFPSSSSSSTIRPQSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDD 136

Query: 121 GDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDGNRFAQSNGNA 180
           GDEDLVL+NHIYDESVP+SSYAIF SIPVDIIDSSYAPIKRRRGRPRKD NRFAQSNGNA
Sbjct: 137 GDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNA 196

Query: 181 APNSKSGCEKRAEEEEIVM 200
           A NS SGC+KRAEE+EIVM
Sbjct: 197 AANSISGCDKRAEEDEIVM 214

[Close]

BLAST of Spg034087 vs. ExPASy TrEMBL
Match: A0A6J1GJ84 (methyl-CpG-binding domain-containing protein 8-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454729 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.5e-91
Identity = 182/199 (91.46%), Postives = 189/199 (94.97%), Query Frame = 0


Query: 1   MNTLPIIDLRLLSQSELYCLSRFSSSSSSSSTSQSNNDDDVLIPKIDRSVFNESAGSRKQ 60
           MNTLPIIDLRLLSQSELYCLSRF SSSSSSS SQSNNDDDVLIPKIDRSVFNESAGSRKQ
Sbjct: 17  MNTLPIIDLRLLSQSELYCLSRF-SSSSSSSISQSNNDDDVLIPKIDRSVFNESAGSRKQ 76

Query: 61  TYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIITLFKQLFVGESHCAVNDTYDD 120
           TYSRLRLAPRK QFPSSSSSSTIRPQSPDR D ESA+I+TLFKQLFVGESHC VND+YDD
Sbjct: 77  TYSRLRLAPRKSQFPSSSSSSTIRPQSPDRFDEESAEIVTLFKQLFVGESHCGVNDSYDD 136

Query: 121 GDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDGNRFAQSNGNA 180
           GDEDLVL+NHIYDESVP+SSYAIF SIPVDIIDSSYAPIKRRRGRPRKD NRFAQSNGNA
Sbjct: 137 GDEDLVLVNHIYDESVPESSYAIFHSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNA 196

Query: 181 APNSKSGCEKRAEEEEIVM 200
           A NS SGC+KRAEE+EIVM
Sbjct: 197 AANSISGCDKRAEEDEIVM 214

[Close]

BLAST of Spg034087 vs. TAIR 10
Match: AT1G22310.2 (methyl-CPG-binding domain 8 )

HSP 1 Score: 94.4 bits (233), Expect = 1.2e-19
Identity = 81/177 (45.76%), Postives = 104/177 (58.76%), Query Frame = 0


Query: 3   TLPIIDLRLLSQSELYCLSRFSSSSSSSSTS--QSNNDDDVLIPKIDRSVFNESAGSRKQ 62
           +LP+ID RLLSQSEL  LS+ SS S SSS S   S   DD L PKIDRSVFNESAGSRKQ
Sbjct: 25  SLPLIDTRLLSQSELRALSQCSSLSPSSSASLAASAGGDDDLTPKIDRSVFNESAGSRKQ 84

Query: 63  TYSRLRLAPRKPQFPSSSSSSTIRPQSPDRLDVESAQIITLFKQLFVGESHCAVNDTYDD 122
           T+ RLRLA R PQ P    S   + Q  D    E  Q+ +L + LF  +S+ +  +  D+
Sbjct: 85  TFLRLRLA-RHPQPPEEPPSP--QRQRDDSSREEQTQVASLLRSLFNVDSNQS-KEEEDE 144

Query: 123 GDEDLVLINHIYDESVPDSSYAIFQSIPVDIID------SSYAPIKRRRGRPRKDGN 172
           G+E+L       +  +  +SY ++Q   +D I       +S   IKR+RGRPRK  N
Sbjct: 145 GEEEL----EDNEGQIHYNSY-VYQRPNLDSIQNVLIQGTSGNKIKRKRGRPRKIRN 192

The following BLAST results are available for this feature:

BLAST of Spg034087 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023002677.1	1.6e-92	91.58	methyl-CpG-binding domain-containing protein 8-like isoform X2 [Cucurbita maxima...	[more]
XP_022952018.1	1.6e-92	91.58	methyl-CpG-binding domain-containing protein 8-like isoform X2 [Cucurbita moscha...	[more]
XP_022132084.1	3.6e-92	91.58	methyl-CpG-binding domain-containing protein 8 isoform X2 [Momordica charantia]	[more]
XP_038885026.1	2.4e-91	89.47	methyl-CpG-binding domain-containing protein 8 isoform X2 [Benincasa hispida]	[more]
XP_022952017.1	5.2e-91	91.46	methyl-CpG-binding domain-containing protein 8-like isoform X1 [Cucurbita moscha...	[more]

BLAST of Spg034087 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LME6	1.6e-18	45.76	Methyl-CpG-binding domain-containing protein 8 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of Spg034087 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KK67	7.9e-93	91.58	methyl-CpG-binding domain-containing protein 8-like isoform X2 OS=Cucurbita maxi...	[more]
A0A6J1GJB3	7.9e-93	91.58	methyl-CpG-binding domain-containing protein 8-like isoform X2 OS=Cucurbita mosc...	[more]
A0A6J1BS27	1.8e-92	91.58	methyl-CpG-binding domain-containing protein 8 isoform X2 OS=Momordica charantia...	[more]
A0A6J1KLZ0	2.5e-91	91.46	methyl-CpG-binding domain-containing protein 8-like isoform X1 OS=Cucurbita maxi...	[more]
A0A6J1GJ84	2.5e-91	91.46	methyl-CpG-binding domain-containing protein 8-like isoform X1 OS=Cucurbita mosc...	[more]

BLAST of Spg034087 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G22310.2	1.2e-19	45.76	methyl-CPG-binding domain 8	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..192
None	No IPR available	PANTHER	PTHR37701:SF1	METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8	coord: 2..198
IPR037472	Methyl-CpG-binding domain-containing protein 8	PANTHER	PTHR37701	METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8	coord: 2..198

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg034087.1	Spg034087.1	mRNA