Spg033909 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg033909
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ribosome biogenesis protein BRX1-like
Location	scaffold13: 35969043 .. 35974978 (-)
RNA-Seq Expression	Spg033909
Synteny	Spg033909

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGGAAACCCTAACAGCTGACGCCACTCCTTCTTCACCTGTTTCCTCCTCCGTTTCAGCAGCTCAGTGCCGCCACCGCGTCTCTCCCGTTCACTGCTGCCGCCACCGCCGTCGTCTTTCTTCCGCTCGTGCCGCTGCCACCGTCGTCTTTCTTCCGTTCGTGCCGCCGCAGCCTCCCTCGATCTTCTACCCCTTGCTGTTACTGGTATTTTCCCAACCTCCATCTATGTCTTTCTGCTTACTTGAAAAATACAAAGTTTCTCCATATAGCCACTTTTATATATAGTATAGAATGGCTGGCTTGGCTCTCTCTCTTTCTCTGTCAATCTTTACAGATTTCCTTAACCTCCTTTGCTTGATTTAGGTGTAGTATTTCTGAAGGGGGAGATATTCTCAATGGCGAAGAAGAGGAAGCATAGCGAGACTTTGCCGATAGTATCGGTTAAGAAGGATGTCAGTGCCACCGAGAGACCCAAGCGGACGCTCATGGGTTGGAAAGACAAGGAAGGTGCGAAAGAGAGTGAAGCTGGTTCTCATCATGCTGTTTTCCGGAATAAAGAGAAGGTTCTTGTCACTTGCTCCCGCCGAATCAACTTTAGGTATGAAATATAGCCAGGACAGTTTGAGTTGCATACTTACATTCCTAATGTTCACATTTGGATCATTAGAGCTGCTGATAGATTATAAGAGAACAAGCTGATGTGTTGTTCTAGACTTATCTATAAATGTAATTTTTAAATTGATCATTAATTTAATAATATGATTGGCAATGTTCAAGAAAGGAAGAAGTGGCTGAAGTCCTTTGAACTATATTAATTATTACGAAAACTAGACACTGATTGAAGAAAAATTTTGGGTAAAAGTGGGATTAAGTACAAGGGCGTGGTTTTGGAGGGAGATGTGGATAGATGATCAACCATTTATGAAGAAATTTTTCTAGTACTTTTTTGTTTTTCAACCAAAGGACATTTGGGTAGCGATACGACTCATGAGAGGAAAAACAAAATCTGGACAATTATAACAAGAAGACACCTACCAGATGTAGAAGCTAATGAATATGGAGAATTGATGGGATTGCTAAGTTATGTAGTCAGTTTTTTGGACGGAGGACATGAAAGTATGGAAATGTTGAATAAGAAATTTCTTGATTGACTTGGAAGGCTCTTGTGCTTAAGAAGATAACTTTTACTGCTGGGGTACTTGTTTTGAGTGTTTAGACAGGTGATAGGATTTAGAAGAGAATCCTTTATGGTGAATTTGCTGCTGAGTTGGTGTACTTTGTGTTGAAAAGCTGAAGATACTGTGAGATATCTAGTTCTAGTGTTTATTGTAACTGTATTTTGTAGTATGAAGTTCTGGAGCTCTTTAGTTGAGTATTGATTTCCCTGCAAAAAGAACACAGTTCGAATGTAATGTGGAGAAGGTTTGAGAGGAAAACCAATAACTATTTCGATAAATTCAATCAAAGCTTTTTATGGGCTATGTGATTAGAAAGAAATTGTTGTACTATATATGATGATAATAAGTATAGACATTGGGAAGAAGCTTTTTTTTTTTTTTTTTGGGATGAATGGAAGGAGCTTTTTGATTTGGCTAAATTTCAACGGTGTTCACTGTTCAGCTACACCTTTCTGTAATTGCATCATTTTAGTTAAAACAAGTTGGTGTAGGTTTTTGTAAAATCTATTAAGAGATACGTACAGGGTCTGACAGTTCTGATGTAGCTTTTCACTCATCAATAAACCTTTGTGTTTGATCAGGTATCGGCATTTGATGTTGAATATGGTATCCCTTTTGCCACATTGTAAAAAGGATAACAAGGTGGAGTCGAGGTCCAGTAAGGGTGCAACACTGAATGAGCTAGTTGAACTCAAGGGTTGTTCTTCCTGCCTATTCTTTGAGGTTAGAACTCTTGCTTTGCACTCTGTCCATGTCTAAACTTGGAATTCGATTCATAATCTGGAATCTGTGAGGTACTATGTTTTTTTATTTTTCTTTTTGATTAGATTTAGGATGATAATTTTTGGTTTTGTTGTGGTATTAAAATGTATTAAGTATCCTCTTCTTTTTGTTTATTATTTATTTACCTTCATGCCTTTTCATCATGTTTGTACAATTTGATCACATTACTTATTTTTGCACTTGTTCCATCGCATTGACTTGGAATTCGATTTGTGTACTTGATTCTAACTGGTCCTTTTGTCCCCTGGATTTTGTTCCTGCACAATCAAATGAAGCATTTTATTCCCAAAGCTTATTGCAAGATTTTTCAGTTCCTTTTCTTTTTGTTTATGTAATTATTTCTATCATTTTACATGCAATATGGCATTTGCATGAGCTTACTTATTGATCTTTTTGTCTCTAATTTCAGTGCAGAAAACATAAAGATCTATATTTATGGATGGCAAAGTGCCCTAGTGGGCCATCTGTAAAGTTCTTAGTTAATGCCGGTAATTTTAACTTGTAATCGAATCTTGTTACTGGATTTTGTGACTGAATTTATATTGGATTTCTTAAGTAAATGCAGTTTGCTTACTTTTCCATTTTTGTTTTCAGTGCATACAATGGAAGAATTGAAACTTACAGGGAACCATCTGAAAGGTTCTCGTCCTATTTTGACATTCTCGTCGAATTTTGATAAAGATGTCCACTGGAAACTTCTAAAGGAAATAATTGTTCAGGTATCAATTAGAAAGTTCTTTTAAGATATTCTTTTATGCAATTTAACTACTCTCATTTCTTAGTGGAATGGCTTCTTGTAATTAACAATTGACAGGATCTTTTGTAATCATTAAACCATATCAGTGAAATGCTTTTTGTTTCCTATCAAACAGAAAAATAATTCATCCTCGAAAATATTTTTGCTTCTTACCCGTGAATGTATCAAATATCAATTTCTGTCTTTCTCCTTTGAATGCTTTTTTTTCCTCATTCCGTCAATCTAAAGTGAACAGTGAACACAGTATGAAATTGATTAAATAATCTTTGCACGACTACAGTTCAATTATCAACTAGAATCCTATGATAGGGATTTCAGTCATGTTATGTCATGAATTTTTGTATGCAGGCTCCTTTGTCTCAGGTTTTTTTTTTTTCCCCCCCAAAAAAAATGAATGATCTTTCGCCTTTCACTTTTCTGAATGGAAGTTGGTTTGCATGTCAAAGAAAAAAGAATATTTGACAATTCGCTTCTTTAATTTAATGTGCTCTGACATAAGAATTTGGATTAGTGATTTCTTGTGCTGGACTTCACATTTTTATGCTGATACCTCAATACTATCCCTCTCTATTCATGTTGCATTTTTTCATGTCCTAGTTTGGGTGGTTATATAGTTTGATTTGATGCCTATTAGCTATGTTACAAAAAGTAATTGTAGATCCTAGTTGCTTCTCCAATTAATGGCATTTTTCCCTCAGATTTTTGGGACTCCGAAGGAGCATCGACATTCCAAACCATACCATGATCATGTATTTGTTTTCTCCATTGTTGATGACCACATATGGTTCCGAAATTACCAGGTATGCCTTATTATATTTCTACTTTTTACAGAATTTTGATGCTCTCAACTGTGGATAGCATCCAAATGCACACTTCTACTTGACATCCAAATCATGTACTAGATGTAGTCTTTCTTTTAAATGTTTGCTTACCACATTTTCCGAAAAGTGGCATTTGAAAGCAAAAAAATATATTCTACGTCATGTTAGGCAAAGACATTGGAAAAACTCTGTGTATTATCAGTTTCTGTATAAATTTCAAACATTTTTTTTTATGTTATTGGAAGTATATTAATCATTAGCCGAGGAGTTTGTCGATCAAGAGTTGCAGTTCATAGGAAGACCAAGATAAGAGCTTGGCCATGAACCGGTATTGGAGCTGCAGAAAGATGCCTAAACCTCTTGTGAAGAGTCACAATTATGGTCCAATAGCTTAGACTTTCTACATGTATTTCATATAGAGACCCGGGAAACAGGAGAAGTAAAAAAAGAACTAGATGAGAGGACTGTCTTTTCAAATACCTCTAGAAGCTCTGAATCTCCCTCTTGGTTTGCCGTTGGTTTTGTATCTTAGAAGTTATAGTATACCTTGTCCCTTTTTCTTGAAGACTTTTAAAGGTTATGACCAAAGCTTCATCCAGATCACGAACAGTGGTGGAAAAAAGAAACAGTGCTCTATTTTGAGAGTAATGATCAAGGCTTCATTCAAGGAACCAACAATGGTGGTGAACGTAATTTAAAGAAGATTATGGCCATTTTGGATATGACTAACGTCAGAACCCTCAACTTTTGGGGGTGTGGATGGTGATGAGAGGATTTGCACTTCATTGATGCATTATGGGTGGGACATTATGTGTTAACAAAATGGAAGAAATGTGATTTGGGCAAATGTACATGCAATACAACCTCGTCAACTGAATATGCAAGAACTCCCACCCCTGCTGGATCGGTTATATTTGAATTCTCATGATCTCAAAACAAGAAGTCTGTATTTGACATAGGCACCACTTTTTTTGGGGGGGGAAGGGGGAGTAATCTTTAGAAATACTACCAGGATGAATATTAGAAGTATCCTTAGGATATAAGGGGTATAATTGTCATTAGCTAAGGAATTTATCGGGGTCATGAATACAATAGGTTGTGGAGGGGTTTGAGATTGAGCAAATTTGGGGAATATTTTTTTTGGGAGAGTCTAGGCTTCTCGAGGTGGTTGAGATCCTGTCATTTTTCTTTCTCAATAAATTTTTTATTAATTTCTAGTTCAATTTCTTCTAGTTCCTATCAGACTCCTTTTACTATTTTCGTATGACTTTTATCCCTTAAAATTATGTGTTCACTTTTGCAAGTATTTGTCCTTGTTTGGGATTTGTGTGGGTGTGATGTGATCTATTCCCCAACTAACCAATACTTAATGATATGGCGTTTGTCTTGTTTGTTTGGTATGATCAGATAACTGTTCCACATAACGAATCAGATAAAGTTGCCCGAGGAGGACTAGATAAAATGACTCTCATCGAGGTTACTATTTTTCCTCGTCTTTCTTAGTTTATAAATGAGTTTTTTCACAAATTTTATTGGACTTGATTGATTTGGTTTTTTTTACAGGTTGGCCCTCGATTCTGTTTGAATCCAATCAAGATATTTGGTGGCAGTTTTGGAGGTCCAACCCTATATGAGAACCCGCTTTACGTATCACCAAACCAGGTTAGATGACTCTACATTTTTTATTTTTTTTGAGTTCACATAGGGTTGTCATAGCAAAAGCTAATTCATTATTTTTTTCAATTCAAGGTTCTTTGAGAAATGATCTGTTCATCTAATTTATTATCATTATACTTTTGGTACTGTCTTTTTCACGGTTCAAAACCCAAAATTGCAATGTTGTCTTGATACTCCAGAGAACGCTCACATCGTACAAATTAGAGACTTTAACTGATGAATACTTTTGATCAACCAATAGTTGAACCGAGTTCTATAATATGAACTTCAACAATAGGATATAGACCTGCTCATGTTTATCATGTCTCTCCCTAGATTCGCGCCTTGGAGAAGAAGCAGAAGGCCGGGAAATACTCGAAGAAAGTCAAAGCAAAAACGAGGAGGAAGATGCACGAGCTATCGAATCCACTGGAACCAGACGAGTTTGCCGATATGTGGAAGGAATAGTCCTTCTATGGACTCAATTTTGTCTAGACTCAAAACTAGAGTTACTTACCTCCAGTATGAAATAGGAATTTGTTCTATAATACTGTTATCTGTAGTGCAAATTTTGGCCTTGTTATTTATCTAAACTTGAATCTTGTTTCTGTACTTTCAATGTTTCTGTTTAAAGATTGGATATCAAAGTCCTCAGTTAATGAGTTTACAAGATAAGATATTATTCATATTTGACTATGTTACCAGGAACGGTTCTGAAAGAAAAGGCATATAGAATTTGGC

mRNA sequence

AAGGAAACCCTAACAGCTGACGCCACTCCTTCTTCACCTGTTTCCTCCTCCGTTTCAGCAGCTCAGTGCCGCCACCGCGTCTCTCCCGTTCACTGCTGCCGCCACCGCCGTCGTCTTTCTTCCGCTCGTGCCGCTGCCACCGTCGTCTTTCTTCCGTTCGTGCCGCCGCAGCCTCCCTCGATCTTCTACCCCTTGCTGTTACTGGGGGAGATATTCTCAATGGCGAAGAAGAGGAAGCATAGCGAGACTTTGCCGATAGTATCGGTTAAGAAGGATGTCAGTGCCACCGAGAGACCCAAGCGGACGCTCATGGGTTGGAAAGACAAGGAAGGTGCGAAAGAGAGTGAAGCTGGTTCTCATCATGCTGTTTTCCGGAATAAAGAGAAGGTTCTTGTCACTTGCTCCCGCCGAATCAACTTTAGGTATCGGCATTTGATGTTGAATATGGTATCCCTTTTGCCACATTGTAAAAAGGATAACAAGGTGGAGTCGAGGTCCAGTAAGGGTGCAACACTGAATGAGCTAGTTGAACTCAAGGGTTGTTCTTCCTGCCTATTCTTTGAGTGCAGAAAACATAAAGATCTATATTTATGGATGGCAAAGTGCCCTAGTGGGCCATCTGTAAAGTTCTTAGTTAATGCCGTGCATACAATGGAAGAATTGAAACTTACAGGGAACCATCTGAAAGGTTCTCGTCCTATTTTGACATTCTCGTCGAATTTTGATAAAGATGTCCACTGGAAACTTCTAAAGGAAATAATTGTTCAGGCTCCTTTGTCTCAGATTTTTGGGACTCCGAAGGAGCATCGACATTCCAAACCATACCATGATCATGTATTTGTTTTCTCCATTGTTGATGACCACATATGGTTCCGAAATTACCAGATAACTGTTCCACATAACGAATCAGATAAAGTTGCCCGAGGAGGACTAGATAAAATGACTCTCATCGAGGTTGGCCCTCGATTCTGTTTGAATCCAATCAAGATATTTGGTGGCAGTTTTGGAGGTCCAACCCTATATGAGAACCCGCTTTACGTATCACCAAACCAGATTCGCGCCTTGGAGAAGAAGCAGAAGGCCGGGAAATACTCGAAGAAAGTCAAAGCAAAAACGAGGAGGAAGATGCACGAGCTATCGAATCCACTGGAACCAGACGAGTTTGCCGATATGTGGAAGGAATAG

Coding sequence (CDS)

AAGGAAACCCTAACAGCTGACGCCACTCCTTCTTCACCTGTTTCCTCCTCCGTTTCAGCAGCTCAGTGCCGCCACCGCGTCTCTCCCGTTCACTGCTGCCGCCACCGCCGTCGTCTTTCTTCCGCTCGTGCCGCTGCCACCGTCGTCTTTCTTCCGTTCGTGCCGCCGCAGCCTCCCTCGATCTTCTACCCCTTGCTGTTACTGGGGGAGATATTCTCAATGGCGAAGAAGAGGAAGCATAGCGAGACTTTGCCGATAGTATCGGTTAAGAAGGATGTCAGTGCCACCGAGAGACCCAAGCGGACGCTCATGGGTTGGAAAGACAAGGAAGGTGCGAAAGAGAGTGAAGCTGGTTCTCATCATGCTGTTTTCCGGAATAAAGAGAAGGTTCTTGTCACTTGCTCCCGCCGAATCAACTTTAGGTATCGGCATTTGATGTTGAATATGGTATCCCTTTTGCCACATTGTAAAAAGGATAACAAGGTGGAGTCGAGGTCCAGTAAGGGTGCAACACTGAATGAGCTAGTTGAACTCAAGGGTTGTTCTTCCTGCCTATTCTTTGAGTGCAGAAAACATAAAGATCTATATTTATGGATGGCAAAGTGCCCTAGTGGGCCATCTGTAAAGTTCTTAGTTAATGCCGTGCATACAATGGAAGAATTGAAACTTACAGGGAACCATCTGAAAGGTTCTCGTCCTATTTTGACATTCTCGTCGAATTTTGATAAAGATGTCCACTGGAAACTTCTAAAGGAAATAATTGTTCAGGCTCCTTTGTCTCAGATTTTTGGGACTCCGAAGGAGCATCGACATTCCAAACCATACCATGATCATGTATTTGTTTTCTCCATTGTTGATGACCACATATGGTTCCGAAATTACCAGATAACTGTTCCACATAACGAATCAGATAAAGTTGCCCGAGGAGGACTAGATAAAATGACTCTCATCGAGGTTGGCCCTCGATTCTGTTTGAATCCAATCAAGATATTTGGTGGCAGTTTTGGAGGTCCAACCCTATATGAGAACCCGCTTTACGTATCACCAAACCAGATTCGCGCCTTGGAGAAGAAGCAGAAGGCCGGGAAATACTCGAAGAAAGTCAAAGCAAAAACGAGGAGGAAGATGCACGAGCTATCGAATCCACTGGAACCAGACGAGTTTGCCGATATGTGGAAGGAATAG

Protein sequence

KETLTADATPSSPVSSSVSAAQCRHRVSPVHCCRHRRRLSSARAAATVVFLPFVPPQPPSIFYPLLLLGEIFSMAKKRKHSETLPIVSVKKDVSATERPKRTLMGWKDKEGAKESEAGSHHAVFRNKEKVLVTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEIIVQAPLSQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQITVPHNESDKVARGGLDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE

Homology

[Close]

BLAST of Spg033909 vs. NCBI nr
Match: KAG7037539.1 (Ribosome biogenesis protein BRX1-like 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 625.2 bits (1611), Expect = 3.9e-175
Identity = 303/321 (94.39%), Postives = 309/321 (96.26%), Query Frame = 0


Query: 74  MAKKRKHSETLPIVSVKKDVSATERPKRTLMGWKDKEGAKESEAGSHHAVFRNKEKVLVT 133
           M KKRKHSETLPIVSVKKD  A ERPKRTL GWKDKE AKE+E+GS HAVFRNKEKVLVT
Sbjct: 1   MPKKRKHSETLPIVSVKKDEGAPERPKRTLTGWKDKEVAKETESGSDHAVFRNKEKVLVT 60

Query: 134 CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHK 193
           CSRRINFRYRHLMLN+VSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNVVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHK 120

Query: 194 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 253
           DLYLWM+KCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSSNFDKDVHWKLLKEI
Sbjct: 121 DLYLWMSKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFDKDVHWKLLKEI 180

Query: 254 IVQAPLSQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQITVPHNESDKVARGGLDK 313
           IV     QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDKVARGGLDK
Sbjct: 181 IV-----QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDK 240

Query: 314 MTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTR 373
           MTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTR
Sbjct: 241 MTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTR 300

Query: 374 RKMHELSNPLEPDEFADMWKE 395
           RKMHELSNPLEPDEFADMWKE
Sbjct: 301 RKMHELSNPLEPDEFADMWKE 316

[Close]

BLAST of Spg033909 vs. NCBI nr
Match: KAG6588467.1 (Ribosome biogenesis protein BRX1-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 625.2 bits (1611), Expect = 3.9e-175
Identity = 303/321 (94.39%), Postives = 309/321 (96.26%), Query Frame = 0


Query: 74  MAKKRKHSETLPIVSVKKDVSATERPKRTLMGWKDKEGAKESEAGSHHAVFRNKEKVLVT 133
           M KKRKHSETLPIVSVKKD  A ERPKRTL GWKDKE AKE+E+GS HAVFRNKEKVLVT
Sbjct: 1   MPKKRKHSETLPIVSVKKDEGAPERPKRTLTGWKDKEVAKETESGSDHAVFRNKEKVLVT 60

Query: 134 CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHK 193
           CSRRINFRYRHLMLN+VSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNVVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHK 120

Query: 194 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 253
           DLYLWM+KCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSSNFDKDVHWKLLKEI
Sbjct: 121 DLYLWMSKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFDKDVHWKLLKEI 180

Query: 254 IVQAPLSQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQITVPHNESDKVARGGLDK 313
           IV     QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDKVARGGLDK
Sbjct: 181 IV-----QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDK 240

Query: 314 MTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTR 373
           MTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTR
Sbjct: 241 MTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTR 300

Query: 374 RKMHELSNPLEPDEFADMWKE 395
           RKMHELSNPLEPDEFADMWKE
Sbjct: 301 RKMHELSNPLEPDEFADMWKE 316

[Close]

BLAST of Spg033909 vs. NCBI nr
Match: XP_008450669.1 (PREDICTED: ribosome biogenesis protein BRX1-like [Cucumis melo] >XP_008450670.1 PREDICTED: ribosome biogenesis protein BRX1-like [Cucumis melo] >XP_008450671.1 PREDICTED: ribosome biogenesis protein BRX1-like [Cucumis melo] >TYK10224.1 ribosome biogenesis protein BRX1-like [Cucumis melo var. makuwa])

HSP 1 Score: 624.0 bits (1608), Expect = 8.7e-175
Identity = 303/321 (94.39%), Postives = 309/321 (96.26%), Query Frame = 0


Query: 74  MAKKRKHSETLPIVSVKKDVSATERPKRTLMGWKDKEGAKESEAGSHHAVFRNKEKVLVT 133
           MAKKRKHSET+P VSVKKD +A ERPKRTLMGWKDKE  K+SEAGS HAVFRNKEKVLVT
Sbjct: 1   MAKKRKHSETVPTVSVKKDENALERPKRTLMGWKDKEVTKKSEAGSDHAVFRNKEKVLVT 60

Query: 134 CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHK 193
           CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSS LFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 194 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 253
           DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKE+
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180

Query: 254 IVQAPLSQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQITVPHNESDKVARGGLDK 313
           I+     QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDKVARGGLDK
Sbjct: 181 II-----QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDK 240

Query: 314 MTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTR 373
           MTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTR
Sbjct: 241 MTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTR 300

Query: 374 RKMHELSNPLEPDEFADMWKE 395
           RKMHELSNPLEPDEFADMWKE
Sbjct: 301 RKMHELSNPLEPDEFADMWKE 316

[Close]

BLAST of Spg033909 vs. NCBI nr
Match: XP_022930733.1 (ribosome biogenesis protein BRX1 homolog 1-like [Cucurbita moschata] >XP_022930743.1 ribosome biogenesis protein BRX1 homolog 1-like [Cucurbita moschata])

HSP 1 Score: 622.1 bits (1603), Expect = 3.3e-174
Identity = 302/321 (94.08%), Postives = 308/321 (95.95%), Query Frame = 0


Query: 74  MAKKRKHSETLPIVSVKKDVSATERPKRTLMGWKDKEGAKESEAGSHHAVFRNKEKVLVT 133
           M KKRKHSETLPIVSVKKD  A ERPKRTL GWKDKE AKE+E+GS HAVFRNKEKVLVT
Sbjct: 1   MPKKRKHSETLPIVSVKKDEGAPERPKRTLTGWKDKEVAKETESGSDHAVFRNKEKVLVT 60

Query: 134 CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHK 193
           CSRRINFRYRHLMLN+VSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNVVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHK 120

Query: 194 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 253
           DLYLWM+KCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSSNFDKDVHWKLLKEI
Sbjct: 121 DLYLWMSKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFDKDVHWKLLKEI 180

Query: 254 IVQAPLSQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQITVPHNESDKVARGGLDK 313
           IV     QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDKVARGGLDK
Sbjct: 181 IV-----QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDK 240

Query: 314 MTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTR 373
           MTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTR
Sbjct: 241 MTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTR 300

Query: 374 RKMHELSNPLEPDEFADMWKE 395
           RKMHELSNPLE DEFADMWKE
Sbjct: 301 RKMHELSNPLEQDEFADMWKE 316

[Close]

BLAST of Spg033909 vs. NCBI nr
Match: XP_023530270.1 (ribosome biogenesis protein BRX1 homolog 1-like [Cucurbita pepo subsp. pepo] >XP_023530271.1 ribosome biogenesis protein BRX1 homolog 1-like [Cucurbita pepo subsp. pepo] >XP_023530272.1 ribosome biogenesis protein BRX1 homolog 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 621.3 bits (1601), Expect = 5.7e-174
Identity = 300/321 (93.46%), Postives = 308/321 (95.95%), Query Frame = 0


Query: 74  MAKKRKHSETLPIVSVKKDVSATERPKRTLMGWKDKEGAKESEAGSHHAVFRNKEKVLVT 133
           M KKRKHSETLPIVSVKKD  A ERPKRTL GWKDKE AKE+E+GS HAVFRNKEKVLVT
Sbjct: 1   MPKKRKHSETLPIVSVKKDEGAPERPKRTLTGWKDKEVAKETESGSDHAVFRNKEKVLVT 60

Query: 134 CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHK 193
           CSRRINFRYRHLMLN+VSLLPHCKKDNKVESRSSKGATLNELVELKGC SCLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNVVSLLPHCKKDNKVESRSSKGATLNELVELKGCCSCLFFECRKHK 120

Query: 194 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 253
           DLYLWM+KCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRP+L+FSSNFDKDVHWKLLKEI
Sbjct: 121 DLYLWMSKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLSFSSNFDKDVHWKLLKEI 180

Query: 254 IVQAPLSQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQITVPHNESDKVARGGLDK 313
           I+     QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDKVARGGLDK
Sbjct: 181 II-----QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDK 240

Query: 314 MTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTR 373
           MTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTR
Sbjct: 241 MTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTR 300

Query: 374 RKMHELSNPLEPDEFADMWKE 395
           RKMHELSNPLEPDEFADMWKE
Sbjct: 301 RKMHELSNPLEPDEFADMWKE 316

[Close]

BLAST of Spg033909 vs. ExPASy Swiss-Prot
Match: Q9LE16 (Ribosome biogenesis protein BRX1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=BRIX1-1 PE=2 SV=1)

HSP 1 Score: 540.0 bits (1390), Expect = 2.2e-152
Identity = 258/321 (80.37%), Postives = 285/321 (88.79%), Query Frame = 0


Query: 74  MAKKRKHSETLPIVSVKKDVSATERPKRTLMGWKDKEGAKESEAGSHHAVFRNKEKVLVT 133
           M +KRKHSET+    VK   SA ERP+RTL+GWKDK+   E+   ++ +VFRNKEKVLVT
Sbjct: 1   MGRKRKHSETVTAAPVKD--SAPERPQRTLLGWKDKKEDAENSKPAYASVFRNKEKVLVT 60

Query: 134 CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHK 193
           CSRRINFRYRHLMLNMVSLLPHCKKD+KVE++SS+GATLNEL+ELKG SSCLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDSKVEAKSSRGATLNELIELKGSSSCLFFECRKHK 120

Query: 194 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 253
           DLY+WM K P GPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSSNF+ D HWKLLKE+
Sbjct: 121 DLYMWMVKSPGGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFENDAHWKLLKEM 180

Query: 254 IVQAPLSQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQITVPHNESDKVARGGLDK 313
                L+QIFG P+ HR SKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDK+ARG LDK
Sbjct: 181 -----LTQIFGIPEGHRKSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKIARGDLDK 240

Query: 314 MTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTR 373
           MTLIEVGPRFCLNPIKIFGGSFGG TLYENP YVSPNQIRALEK+ KAGK++KK+KAKTR
Sbjct: 241 MTLIEVGPRFCLNPIKIFGGSFGGTTLYENPFYVSPNQIRALEKRNKAGKFAKKIKAKTR 300

Query: 374 RKMHELSNPLEPDEFADMWKE 395
           RKMHELSNPLEPDEF DMW +
Sbjct: 301 RKMHELSNPLEPDEFTDMWND 314

[Close]

BLAST of Spg033909 vs. ExPASy Swiss-Prot
Match: Q9C928 (Ribosome biogenesis protein BRX1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=BRIX1-2 PE=2 SV=1)

HSP 1 Score: 532.7 bits (1371), Expect = 3.5e-150
Identity = 256/323 (79.26%), Postives = 285/323 (88.24%), Query Frame = 0


Query: 74  MAKKRKHSETLPIVSVKK-DVSATERPKRTLMGWKDK-EGAKESEAGSHHAVFRNKEKVL 133
           M +KRKHSET     VKK D  A +RPKRTL+GWKDK EG  E       + F+NKEKVL
Sbjct: 1   MGRKRKHSETEAPAPVKKSDEPAPDRPKRTLLGWKDKSEGEAEKAKALTSSGFKNKEKVL 60

Query: 134 VTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRK 193
           VTCSRRI+FRYR LMLN+VSLLPHCKKD+KVE++SSKGATLNEL+ELK  +SCLFFECRK
Sbjct: 61  VTCSRRISFRYRSLMLNIVSLLPHCKKDSKVEAKSSKGATLNELIELKNSNSCLFFECRK 120

Query: 194 HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLK 253
           HKDLY+WM K P+GPSVKFLV AVH MEE+KLTGNHLKGSRP+LTFSSNFDKD HWKLLK
Sbjct: 121 HKDLYMWMVKSPNGPSVKFLVKAVHAMEEMKLTGNHLKGSRPLLTFSSNFDKDAHWKLLK 180

Query: 254 EIIVQAPLSQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQITVPHNESDKVARGGL 313
           E+     L+Q+FG PKEHR SKPYHDHVFVFSIVD+HIWFRNYQI+VPHNESDK+A+GGL
Sbjct: 181 EM-----LTQVFGIPKEHRKSKPYHDHVFVFSIVDEHIWFRNYQISVPHNESDKIAKGGL 240

Query: 314 DKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAK 373
           DKMTLIEVGPRFCLNPIKIF GSFGGPTLYENPLYVSPNQIRALEK+ KAGK++KK+KAK
Sbjct: 241 DKMTLIEVGPRFCLNPIKIFAGSFGGPTLYENPLYVSPNQIRALEKRNKAGKFAKKIKAK 300

Query: 374 TRRKMHELSNPLEPDEFADMWKE 395
           TR+KMHELSNPLEPDEFADMWK+
Sbjct: 301 TRKKMHELSNPLEPDEFADMWKD 318

[Close]

BLAST of Spg033909 vs. ExPASy Swiss-Prot
Match: Q8UVY2 (Ribosome biogenesis protein BRX1 homolog OS=Xenopus laevis OX=8355 GN=brix1 PE=2 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.8e-66
Identity = 144/325 (44.31%), Postives = 200/325 (61.54%), Query Frame = 0


Query: 75  AKKRKHSETLPIVSVKKDVSATERPKRTLMGWKDKEGAKESEAGSHHAV--------FRN 134
           A KRK   +LP V+       T++ K+ L G       +E+ AG    V        ++N
Sbjct: 3   AYKRKRG-SLPEVATN-----TKKAKKQLAG-----SEQEATAGEEFIVPPPVSEGKWKN 62

Query: 135 KEKVLVTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLF 194
           KE+VL+  SR INFR RHLM ++ SL+PH + + K++ R  K   +NE+ E+K C+ C++
Sbjct: 63  KERVLIFSSRGINFRTRHLMQDLRSLMPHSRAETKMD-RKDKLFVVNEVCEMKNCNKCIY 122

Query: 195 FECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVH 254
           FE +K +DLY+W++  P GPS KFLV  +HT+ ELK++GN LKGSRPIL+F   FD++  
Sbjct: 123 FEAKKKQDLYMWLSNSPEGPSAKFLVQNIHTLAELKMSGNCLKGSRPILSFDPAFDREPQ 182

Query: 255 WKLLKEIIVQAPLSQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQITVPHNESDKV 314
           + LLKE+     L+QIFGTP+ H  S+P+ DH+F FSI D+ IWFRNYQI     E D  
Sbjct: 183 YALLKEL-----LTQIFGTPRYHPRSQPFVDHIFTFSIADNRIWFRNYQII----EED-- 242

Query: 315 ARGGLDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSK 374
                    L+E+GPRF LN IKIF GSFGGPTLYENP Y SPN  R + +   A K  +
Sbjct: 243 -------AALVEIGPRFVLNLIKIFKGSFGGPTLYENPHYQSPNMHRRMIRLATAAKVKE 297

Query: 375 KVKAKTRRKMHELSN----PLEPDE 388
           K + K  +K+ +  +    P++P E
Sbjct: 303 KQQVKEVQKLKKEEDRPVIPVDPTE 297

[Close]

BLAST of Spg033909 vs. ExPASy Swiss-Prot
Match: Q3SZZ0 (Ribosome biogenesis protein BRX1 homolog OS=Bos taurus OX=9913 GN=BRIX1 PE=2 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.5e-65
Identity = 130/271 (47.97%), Postives = 178/271 (65.68%), Query Frame = 0


Query: 124 FRNKEKVLVTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSS 183
           ++NKE++L+  SR INFR RHLM ++  L+PH K D K++ R  K   +NE+ E+K C+ 
Sbjct: 56  WKNKERILIFSSRGINFRTRHLMQDLRMLMPHSKADTKMD-RKDKLFVINEVCEMKNCNK 115

Query: 184 CLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDK 243
           C++FE +K +DLY+W++  P GPS KFLV  +HT+ ELK+TGN LKGSRP+L+F   FD+
Sbjct: 116 CIYFEAKKKQDLYMWLSNSPHGPSAKFLVQNIHTLAELKMTGNCLKGSRPLLSFDPAFDE 175

Query: 244 DVHWKLLKEIIVQAPLSQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQITVPHNES 303
             H+ LLKE+++     QIF TP+ H  S+P+ DHVF F+I+D+ IWFRN+QI     E 
Sbjct: 176 LPHYALLKELLI-----QIFSTPRYHPKSQPFVDHVFTFTILDNRIWFRNFQII----EE 235

Query: 304 DKVARGGLDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGK 363
           D           L+E+GPRF LN IKIF GSFGGPTLYENP Y SPN  R + +   A K
Sbjct: 236 D---------AALVEIGPRFVLNLIKIFQGSFGGPTLYENPHYQSPNMHRRVIRSITAAK 295

Query: 364 YSKKVKAKTRRKMH--ELSNPLEPDEFADMW 393
           Y +K + K  +K+   E    L  D  AD++
Sbjct: 296 YREKQQVKDVQKLRKKEPKTILPHDPTADVF 307

[Close]

BLAST of Spg033909 vs. ExPASy Swiss-Prot
Match: Q8TDN6 (Ribosome biogenesis protein BRX1 homolog OS=Homo sapiens OX=9606 GN=BRIX1 PE=1 SV=2)

HSP 1 Score: 251.5 bits (641), Expect = 1.5e-65
Identity = 130/271 (47.97%), Postives = 178/271 (65.68%), Query Frame = 0


Query: 124 FRNKEKVLVTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSS 183
           ++NKE++L+  SR INFR RHLM ++  L+PH K D K++ R  K   +NE+ E+K C+ 
Sbjct: 56  WKNKERILIFSSRGINFRTRHLMQDLRMLMPHSKADTKMD-RKDKLFVINEVCEMKNCNK 115

Query: 184 CLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDK 243
           C++FE +K +DLY+W++  P GPS KFLV  +HT+ ELK+TGN LKGSRP+L+F   FD+
Sbjct: 116 CIYFEAKKKQDLYMWLSNSPHGPSAKFLVQNIHTLAELKMTGNCLKGSRPLLSFDPAFDE 175

Query: 244 DVHWKLLKEIIVQAPLSQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQITVPHNES 303
             H+ LLKE+++     QIF TP+ H  S+P+ DHVF F+I+D+ IWFRN+QI     E 
Sbjct: 176 LPHYALLKELLI-----QIFSTPRYHPKSQPFVDHVFTFTILDNRIWFRNFQII----EE 235

Query: 304 DKVARGGLDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGK 363
           D           L+E+GPRF LN IKIF GSFGGPTLYENP Y SPN  R + +   A K
Sbjct: 236 D---------AALVEIGPRFVLNLIKIFQGSFGGPTLYENPHYQSPNMHRRVIRSITAAK 295

Query: 364 YSKKVKAKTRRKMH--ELSNPLEPDEFADMW 393
           Y +K + K  +K+   E    L  D  AD++
Sbjct: 296 YREKQQVKDVQKLRKKEPKTLLPHDPTADVF 307

[Close]

BLAST of Spg033909 vs. ExPASy TrEMBL
Match: A0A1S3BQS3 (ribosome biogenesis protein BRX1-like OS=Cucumis melo OX=3656 GN=LOC103492188 PE=3 SV=1)

HSP 1 Score: 624.0 bits (1608), Expect = 4.2e-175
Identity = 303/321 (94.39%), Postives = 309/321 (96.26%), Query Frame = 0


Query: 74  MAKKRKHSETLPIVSVKKDVSATERPKRTLMGWKDKEGAKESEAGSHHAVFRNKEKVLVT 133
           MAKKRKHSET+P VSVKKD +A ERPKRTLMGWKDKE  K+SEAGS HAVFRNKEKVLVT
Sbjct: 1   MAKKRKHSETVPTVSVKKDENALERPKRTLMGWKDKEVTKKSEAGSDHAVFRNKEKVLVT 60

Query: 134 CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHK 193
           CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSS LFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 194 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 253
           DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKE+
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180

Query: 254 IVQAPLSQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQITVPHNESDKVARGGLDK 313
           I+     QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDKVARGGLDK
Sbjct: 181 II-----QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDK 240

Query: 314 MTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTR 373
           MTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTR
Sbjct: 241 MTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTR 300

Query: 374 RKMHELSNPLEPDEFADMWKE 395
           RKMHELSNPLEPDEFADMWKE
Sbjct: 301 RKMHELSNPLEPDEFADMWKE 316

[Close]

BLAST of Spg033909 vs. ExPASy TrEMBL
Match: A0A5D3CG95 (Ribosome biogenesis protein BRX1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003710 PE=3 SV=1)

HSP 1 Score: 624.0 bits (1608), Expect = 4.2e-175
Identity = 303/321 (94.39%), Postives = 309/321 (96.26%), Query Frame = 0


Query: 74  MAKKRKHSETLPIVSVKKDVSATERPKRTLMGWKDKEGAKESEAGSHHAVFRNKEKVLVT 133
           MAKKRKHSET+P VSVKKD +A ERPKRTLMGWKDKE  K+SEAGS HAVFRNKEKVLVT
Sbjct: 1   MAKKRKHSETVPTVSVKKDENALERPKRTLMGWKDKEVTKKSEAGSDHAVFRNKEKVLVT 60

Query: 134 CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHK 193
           CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSS LFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 194 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 253
           DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKE+
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180

Query: 254 IVQAPLSQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQITVPHNESDKVARGGLDK 313
           I+     QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDKVARGGLDK
Sbjct: 181 II-----QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDK 240

Query: 314 MTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTR 373
           MTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTR
Sbjct: 241 MTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTR 300

Query: 374 RKMHELSNPLEPDEFADMWKE 395
           RKMHELSNPLEPDEFADMWKE
Sbjct: 301 RKMHELSNPLEPDEFADMWKE 316

[Close]

BLAST of Spg033909 vs. ExPASy TrEMBL
Match: A0A6J1EW75 (ribosome biogenesis protein BRX1 homolog 1-like OS=Cucurbita moschata OX=3662 GN=LOC111437121 PE=3 SV=1)

HSP 1 Score: 622.1 bits (1603), Expect = 1.6e-174
Identity = 302/321 (94.08%), Postives = 308/321 (95.95%), Query Frame = 0


Query: 74  MAKKRKHSETLPIVSVKKDVSATERPKRTLMGWKDKEGAKESEAGSHHAVFRNKEKVLVT 133
           M KKRKHSETLPIVSVKKD  A ERPKRTL GWKDKE AKE+E+GS HAVFRNKEKVLVT
Sbjct: 1   MPKKRKHSETLPIVSVKKDEGAPERPKRTLTGWKDKEVAKETESGSDHAVFRNKEKVLVT 60

Query: 134 CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHK 193
           CSRRINFRYRHLMLN+VSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNVVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHK 120

Query: 194 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 253
           DLYLWM+KCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSSNFDKDVHWKLLKEI
Sbjct: 121 DLYLWMSKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFDKDVHWKLLKEI 180

Query: 254 IVQAPLSQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQITVPHNESDKVARGGLDK 313
           IV     QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDKVARGGLDK
Sbjct: 181 IV-----QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDK 240

Query: 314 MTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTR 373
           MTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTR
Sbjct: 241 MTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTR 300

Query: 374 RKMHELSNPLEPDEFADMWKE 395
           RKMHELSNPLE DEFADMWKE
Sbjct: 301 RKMHELSNPLEQDEFADMWKE 316

[Close]

BLAST of Spg033909 vs. ExPASy TrEMBL
Match: A0A6J1I0V9 (ribosome biogenesis protein BRX1 homolog 1-like OS=Cucurbita maxima OX=3661 GN=LOC111467989 PE=3 SV=1)

HSP 1 Score: 620.5 bits (1599), Expect = 4.7e-174
Identity = 301/321 (93.77%), Postives = 308/321 (95.95%), Query Frame = 0


Query: 74  MAKKRKHSETLPIVSVKKDVSATERPKRTLMGWKDKEGAKESEAGSHHAVFRNKEKVLVT 133
           MAKKRKHSETLPIVSVKKD  A ERPKRTL GWKDKE  KE+E+GS HAVFRNKEKVLVT
Sbjct: 1   MAKKRKHSETLPIVSVKKDEGALERPKRTLTGWKDKEVVKEAESGSDHAVFRNKEKVLVT 60

Query: 134 CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHK 193
           CSRRINFRYRHLMLN+VSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNVVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHK 120

Query: 194 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 253
           DLYLWM+KCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSSNFDKDVHWKLLKEI
Sbjct: 121 DLYLWMSKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFDKDVHWKLLKEI 180

Query: 254 IVQAPLSQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQITVPHNESDKVARGGLDK 313
           IV     QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNES KVARGGLDK
Sbjct: 181 IV-----QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESVKVARGGLDK 240

Query: 314 MTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTR 373
           MTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKK+KAGKYSKKVKAKTR
Sbjct: 241 MTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKKKAGKYSKKVKAKTR 300

Query: 374 RKMHELSNPLEPDEFADMWKE 395
           RKMHELSNPLEPDEFADMWKE
Sbjct: 301 RKMHELSNPLEPDEFADMWKE 316

[Close]

BLAST of Spg033909 vs. ExPASy TrEMBL
Match: A0A6J1E0T2 (ribosome biogenesis protein BRX1 homolog 1-like OS=Momordica charantia OX=3673 GN=LOC111026105 PE=3 SV=1)

HSP 1 Score: 609.8 bits (1571), Expect = 8.3e-171
Identity = 299/322 (92.86%), Postives = 304/322 (94.41%), Query Frame = 0


Query: 74  MAKKRKHSETLPIVSVKKDVSATERPKRTLMGWKDKEGAKESEAGSHHAVFRNKEKVLVT 133
           MAKKRKHSE L  V+VKKD  A ERPKRTLMGWKDKE  KESE+GS HAVFRNKEKVLVT
Sbjct: 1   MAKKRKHSEALASVAVKKDSDAPERPKRTLMGWKDKEVGKESESGSDHAVFRNKEKVLVT 60

Query: 134 CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHK 193
           CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSS LFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 194 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 253
           DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKE+
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180

Query: 254 IVQAPLSQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQITVPHNES-DKVARGGLD 313
           IV     QIFG PKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI VPHNES DKVARGGLD
Sbjct: 181 IV-----QIFGIPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESADKVARGGLD 240

Query: 314 KMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKT 373
           K+TLIEVGPRFCLNPIKIFGGSFGGPTLYENPLY+SPNQIRALEKKQKAGKYSKKVKAKT
Sbjct: 241 KVTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYISPNQIRALEKKQKAGKYSKKVKAKT 300

Query: 374 RRKMHELSNPLEPDEFADMWKE 395
           RRKMHELSNPLEPDEFADMWKE
Sbjct: 301 RRKMHELSNPLEPDEFADMWKE 317

[Close]

BLAST of Spg033909 vs. TAIR 10
Match: AT3G15460.1 (Ribosomal RNA processing Brix domain protein )

HSP 1 Score: 540.0 bits (1390), Expect = 1.5e-153
Identity = 258/321 (80.37%), Postives = 285/321 (88.79%), Query Frame = 0


Query: 74  MAKKRKHSETLPIVSVKKDVSATERPKRTLMGWKDKEGAKESEAGSHHAVFRNKEKVLVT 133
           M +KRKHSET+    VK   SA ERP+RTL+GWKDK+   E+   ++ +VFRNKEKVLVT
Sbjct: 1   MGRKRKHSETVTAAPVKD--SAPERPQRTLLGWKDKKEDAENSKPAYASVFRNKEKVLVT 60

Query: 134 CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHK 193
           CSRRINFRYRHLMLNMVSLLPHCKKD+KVE++SS+GATLNEL+ELKG SSCLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDSKVEAKSSRGATLNELIELKGSSSCLFFECRKHK 120

Query: 194 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 253
           DLY+WM K P GPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSSNF+ D HWKLLKE+
Sbjct: 121 DLYMWMVKSPGGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFENDAHWKLLKEM 180

Query: 254 IVQAPLSQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQITVPHNESDKVARGGLDK 313
                L+QIFG P+ HR SKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDK+ARG LDK
Sbjct: 181 -----LTQIFGIPEGHRKSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKIARGDLDK 240

Query: 314 MTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTR 373
           MTLIEVGPRFCLNPIKIFGGSFGG TLYENP YVSPNQIRALEK+ KAGK++KK+KAKTR
Sbjct: 241 MTLIEVGPRFCLNPIKIFGGSFGGTTLYENPFYVSPNQIRALEKRNKAGKFAKKIKAKTR 300

Query: 374 RKMHELSNPLEPDEFADMWKE 395
           RKMHELSNPLEPDEF DMW +
Sbjct: 301 RKMHELSNPLEPDEFTDMWND 314

[Close]

BLAST of Spg033909 vs. TAIR 10
Match: AT1G52930.1 (Ribosomal RNA processing Brix domain protein )

HSP 1 Score: 532.7 bits (1371), Expect = 2.5e-151
Identity = 256/323 (79.26%), Postives = 285/323 (88.24%), Query Frame = 0


Query: 74  MAKKRKHSETLPIVSVKK-DVSATERPKRTLMGWKDK-EGAKESEAGSHHAVFRNKEKVL 133
           M +KRKHSET     VKK D  A +RPKRTL+GWKDK EG  E       + F+NKEKVL
Sbjct: 1   MGRKRKHSETEAPAPVKKSDEPAPDRPKRTLLGWKDKSEGEAEKAKALTSSGFKNKEKVL 60

Query: 134 VTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRK 193
           VTCSRRI+FRYR LMLN+VSLLPHCKKD+KVE++SSKGATLNEL+ELK  +SCLFFECRK
Sbjct: 61  VTCSRRISFRYRSLMLNIVSLLPHCKKDSKVEAKSSKGATLNELIELKNSNSCLFFECRK 120

Query: 194 HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLK 253
           HKDLY+WM K P+GPSVKFLV AVH MEE+KLTGNHLKGSRP+LTFSSNFDKD HWKLLK
Sbjct: 121 HKDLYMWMVKSPNGPSVKFLVKAVHAMEEMKLTGNHLKGSRPLLTFSSNFDKDAHWKLLK 180

Query: 254 EIIVQAPLSQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQITVPHNESDKVARGGL 313
           E+     L+Q+FG PKEHR SKPYHDHVFVFSIVD+HIWFRNYQI+VPHNESDK+A+GGL
Sbjct: 181 EM-----LTQVFGIPKEHRKSKPYHDHVFVFSIVDEHIWFRNYQISVPHNESDKIAKGGL 240

Query: 314 DKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAK 373
           DKMTLIEVGPRFCLNPIKIF GSFGGPTLYENPLYVSPNQIRALEK+ KAGK++KK+KAK
Sbjct: 241 DKMTLIEVGPRFCLNPIKIFAGSFGGPTLYENPLYVSPNQIRALEKRNKAGKFAKKIKAK 300

Query: 374 TRRKMHELSNPLEPDEFADMWKE 395
           TR+KMHELSNPLEPDEFADMWK+
Sbjct: 301 TRKKMHELSNPLEPDEFADMWKD 318

The following BLAST results are available for this feature:

BLAST of Spg033909 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7037539.1	3.9e-175	94.39	Ribosome biogenesis protein BRX1-like 1 [Cucurbita argyrosperma subsp. argyrospe...	[more]
KAG6588467.1	3.9e-175	94.39	Ribosome biogenesis protein BRX1-like 1, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_008450669.1	8.7e-175	94.39	PREDICTED: ribosome biogenesis protein BRX1-like [Cucumis melo] >XP_008450670.1 ...	[more]
XP_022930733.1	3.3e-174	94.08	ribosome biogenesis protein BRX1 homolog 1-like [Cucurbita moschata] >XP_0229307...	[more]
XP_023530270.1	5.7e-174	93.46	ribosome biogenesis protein BRX1 homolog 1-like [Cucurbita pepo subsp. pepo] >XP...	[more]

BLAST of Spg033909 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LE16	2.2e-152	80.37	Ribosome biogenesis protein BRX1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=BR...	[more]
Q9C928	3.5e-150	79.26	Ribosome biogenesis protein BRX1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=BR...	[more]
Q8UVY2	1.8e-66	44.31	Ribosome biogenesis protein BRX1 homolog OS=Xenopus laevis OX=8355 GN=brix1 PE=2...	[more]
Q3SZZ0	1.5e-65	47.97	Ribosome biogenesis protein BRX1 homolog OS=Bos taurus OX=9913 GN=BRIX1 PE=2 SV=...	[more]
Q8TDN6	1.5e-65	47.97	Ribosome biogenesis protein BRX1 homolog OS=Homo sapiens OX=9606 GN=BRIX1 PE=1 S...	[more]

BLAST of Spg033909 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BQS3	4.2e-175	94.39	ribosome biogenesis protein BRX1-like OS=Cucumis melo OX=3656 GN=LOC103492188 PE...	[more]
A0A5D3CG95	4.2e-175	94.39	Ribosome biogenesis protein BRX1-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1EW75	1.6e-174	94.08	ribosome biogenesis protein BRX1 homolog 1-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1I0V9	4.7e-174	93.77	ribosome biogenesis protein BRX1 homolog 1-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1E0T2	8.3e-171	92.86	ribosome biogenesis protein BRX1 homolog 1-like OS=Momordica charantia OX=3673 G...	[more]

BLAST of Spg033909 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15460.1	1.5e-153	80.37	Ribosomal RNA processing Brix domain protein	[more]
AT1G52930.1	2.5e-151	79.26	Ribosomal RNA processing Brix domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007109	Brix domain	SMART	SM00879	Brix_2	coord: 131..330 e-value: 4.8E-48 score: 175.6
IPR007109	Brix domain	PFAM	PF04427	Brix	coord: 135..329 e-value: 2.6E-31 score: 109.3
IPR007109	Brix domain	PROSITE	PS50833	BRIX	coord: 128..336 score: 31.46788
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 358..394
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 375..394
None	No IPR available	PANTHER	PTHR13634:SF3	RIBOSOME BIOGENESIS PROTEIN BRX1 HOMOLOG 2	coord: 74..394
None	No IPR available	SUPERFAMILY	52954	Class II aaRS ABD-related	coord: 129..333
IPR026532	Ribosome biogenesis protein BRX1	PANTHER	PTHR13634	RIBOSOME BIOGENESIS PROTEIN BRIX	coord: 74..394

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg033909.1	Spg033909.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
molecular_function	GO:0019843	rRNA binding