Spg033882 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg033882
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Histone H3
Location	scaffold13: 34253322 .. 34253969 (+)
RNA-Seq Expression	Spg033882
Synteny	Spg033882

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTGTTTTGTTTTGATTGAATGGCGATATTTAATTTGCGTGACGTCGATGCAGATGGCTCGTACGAAGCAAACCGCTCGCAAATCCACCGGTGGTAAAGCCCCCAGAAAGCAGCTCGCTACTAAGGTATGAACAAGGAAGATTTGGAAACCTAGTTCTCAATTCTCATTTGTTTCCTGACCTAATATATCGTCACCAATAATTCTTTCAGGCTGCGCGTAAGTCGGCCCCAACTACTGGAGGCGTGAAGAAACCTCACAGATACCGTCCAGGAACCGTCGCTCTTCGGTATGTAACCTTATCTGATATTTGTCTTTGCCAACAGATCAACATTGGTTTCTTGTTTACATAAATCTCATGCCCTCTGCCGACGTATCGTTTTGCAGAGAAATCCGCAAGTACCAGAAGAGCACCGAGCTTCTAATCCGCAAGCTCCCATTCCAGAGGCTGGTTCGTGAAATCGCCCAGGATTTCAAGACAGATCTGCGTTTCCAGAGTCACGCGGTTTTGGCCCTGCAAGAGGCGGCCGAAGCTTACCTCGTTGGGCTGTTTGAAGACACCAACCTCTGCGCCATCCATGCCAAGCGCGTTACAATAATGCCCAAAGATATTCAACTTGCCAGAAGAATCCGCGGTGAAAGAGCTTAA

mRNA sequence

ATCTGTTTTGTTTTGATTGAATGGCGATATTTAATTTGCGTGACGTCGATGCAGATGGCTCGTACGAAGCAAACCGCTCGCAAATCCACCGGTGGTAAAGCCCCCAGAAAGCAGCTCGCTACTAAGGCTGCGCGTAAGTCGGCCCCAACTACTGGAGGCGTGAAGAAACCTCACAGATACCGTCCAGGAACCGTCGCTCTTCGAGAAATCCGCAAGTACCAGAAGAGCACCGAGCTTCTAATCCGCAAGCTCCCATTCCAGAGGCTGGTTCGTGAAATCGCCCAGGATTTCAAGACAGATCTGCGTTTCCAGAGTCACGCGGTTTTGGCCCTGCAAGAGGCGGCCGAAGCTTACCTCGTTGGGCTGTTTGAAGACACCAACCTCTGCGCCATCCATGCCAAGCGCGTTACAATAATGCCCAAAGATATTCAACTTGCCAGAAGAATCCGCGGTGAAAGAGCTTAA

Coding sequence (CDS)

ATCTGTTTTGTTTTGATTGAATGGCGATATTTAATTTGCGTGACGTCGATGCAGATGGCTCGTACGAAGCAAACCGCTCGCAAATCCACCGGTGGTAAAGCCCCCAGAAAGCAGCTCGCTACTAAGGCTGCGCGTAAGTCGGCCCCAACTACTGGAGGCGTGAAGAAACCTCACAGATACCGTCCAGGAACCGTCGCTCTTCGAGAAATCCGCAAGTACCAGAAGAGCACCGAGCTTCTAATCCGCAAGCTCCCATTCCAGAGGCTGGTTCGTGAAATCGCCCAGGATTTCAAGACAGATCTGCGTTTCCAGAGTCACGCGGTTTTGGCCCTGCAAGAGGCGGCCGAAGCTTACCTCGTTGGGCTGTTTGAAGACACCAACCTCTGCGCCATCCATGCCAAGCGCGTTACAATAATGCCCAAAGATATTCAACTTGCCAGAAGAATCCGCGGTGAAAGAGCTTAA

Protein sequence

ICFVLIEWRYLICVTSMQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

Homology

[Close]

BLAST of Spg033882 vs. NCBI nr
Match: XP_022997287.1 (histone H3.3 isoform X1 [Cucurbita maxima])

HSP 1 Score: 267.3 bits (682), Expect = 8.1e-68
Identity = 142/146 (97.26%), Postives = 143/146 (97.95%), Query Frame = 0


Query: 9   RYLICVTSMQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALR 68
           RYLI  T +QMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALR
Sbjct: 4   RYLIRTTLIQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALR 63

Query: 69  EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 128
           EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL
Sbjct: 64  EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 123

Query: 129 CAIHAKRVTIMPKDIQLARRIRGERA 155
           CAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 124 CAIHAKRVTIMPKDIQLARRIRGERA 149

[Close]

BLAST of Spg033882 vs. NCBI nr
Match: XP_023002730.1 (histone H3.3 isoform X1 [Cucurbita maxima] >XP_023537221.1 histone H3.3 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 263.1 bits (671), Expect = 1.5e-66
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 16  SMQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 75
           SMQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK
Sbjct: 2   SMQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 61

Query: 76  STELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR 135
           STELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR
Sbjct: 62  STELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR 121

Query: 136 VTIMPKDIQLARRIRGERA 155
           VTIMPKDIQLARRIRGERA
Sbjct: 122 VTIMPKDIQLARRIRGERA 140

[Close]

BLAST of Spg033882 vs. NCBI nr
Match: XP_022951614.1 (histone H3.3 isoform X2 [Cucurbita moschata])

HSP 1 Score: 261.5 bits (667), Expect = 4.5e-66
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 17  MQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS 76
           MQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS
Sbjct: 1   MQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS 60

Query: 77  TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV 136
           TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV
Sbjct: 61  TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV 120

Query: 137 TIMPKDIQLARRIRGERA 155
           TIMPKDIQLARRIRGERA
Sbjct: 121 TIMPKDIQLARRIRGERA 138

[Close]

BLAST of Spg033882 vs. NCBI nr
Match: XP_017230674.1 (PREDICTED: histone H3.3 isoform X1 [Daucus carota subsp. sativus])

HSP 1 Score: 260.8 bits (665), Expect = 7.6e-66
Identity = 139/145 (95.86%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 10  YLICVTSMQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALRE 69
           +L  V   QMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALRE
Sbjct: 10  FLNLVMLFQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALRE 69

Query: 70  IRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLC 129
           IRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLC
Sbjct: 70  IRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLC 129

Query: 130 AIHAKRVTIMPKDIQLARRIRGERA 155
           AIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 130 AIHAKRVTIMPKDIQLARRIRGERA 154

[Close]

BLAST of Spg033882 vs. NCBI nr
Match: KAG6585308.1 (O-fucosyltransferase 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 260.4 bits (664), Expect = 9.9e-66
Identity = 137/139 (98.56%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 16  SMQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 75
           ++QMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK
Sbjct: 590 AVQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 649

Query: 76  STELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR 135
           STELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR
Sbjct: 650 STELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR 709

Query: 136 VTIMPKDIQLARRIRGERA 155
           VTIMPKDIQLARRIRGERA
Sbjct: 710 VTIMPKDIQLARRIRGERA 728

[Close]

BLAST of Spg033882 vs. ExPASy Swiss-Prot
Match: P59169 (Histone H3.3 OS=Arabidopsis thaliana OX=3702 GN=HTR4 PE=1 SV=2)

HSP 1 Score: 257.7 bits (657), Expect = 8.4e-68
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 19  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 78
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 79  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 138
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 139 MPKDIQLARRIRGERA 155
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of Spg033882 vs. ExPASy Swiss-Prot
Match: Q6RUR1 (Histone H3.3 OS=Capsicum annuum OX=4072 PE=2 SV=3)

HSP 1 Score: 257.7 bits (657), Expect = 8.4e-68
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 19  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 78
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 79  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 138
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 139 MPKDIQLARRIRGERA 155
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of Spg033882 vs. ExPASy Swiss-Prot
Match: Q71V89 (Histone H3.3 OS=Gossypium hirsutum OX=3635 GN=HIS3 PE=2 SV=3)

HSP 1 Score: 257.7 bits (657), Expect = 8.4e-68
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 19  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 78
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 79  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 138
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 139 MPKDIQLARRIRGERA 155
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of Spg033882 vs. ExPASy Swiss-Prot
Match: Q3C2E5 (Histone H3.3 OS=Lolium multiflorum OX=4521 GN=RH3 PE=2 SV=3)

HSP 1 Score: 257.7 bits (657), Expect = 8.4e-68
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 19  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 78
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 79  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 138
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 139 MPKDIQLARRIRGERA 155
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of Spg033882 vs. ExPASy Swiss-Prot
Match: P69245 (Histone H3.3 OS=Lolium temulentum OX=34176 PE=2 SV=2)

HSP 1 Score: 257.7 bits (657), Expect = 8.4e-68
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 19  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 78
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 79  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 138
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 139 MPKDIQLARRIRGERA 155
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of Spg033882 vs. ExPASy TrEMBL
Match: A0A6J1K4K6 (Histone H3 OS=Cucurbita maxima OX=3661 GN=LOC111492236 PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 3.9e-68
Identity = 142/146 (97.26%), Postives = 143/146 (97.95%), Query Frame = 0


Query: 9   RYLICVTSMQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALR 68
           RYLI  T +QMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALR
Sbjct: 4   RYLIRTTLIQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALR 63

Query: 69  EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 128
           EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL
Sbjct: 64  EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 123

Query: 129 CAIHAKRVTIMPKDIQLARRIRGERA 155
           CAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 124 CAIHAKRVTIMPKDIQLARRIRGERA 149

[Close]

BLAST of Spg033882 vs. ExPASy TrEMBL
Match: A0A6J1KPT2 (Histone H3 OS=Cucurbita maxima OX=3661 GN=LOC111496502 PE=3 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 7.4e-67
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 16  SMQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 75
           SMQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK
Sbjct: 2   SMQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 61

Query: 76  STELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR 135
           STELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR
Sbjct: 62  STELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR 121

Query: 136 VTIMPKDIQLARRIRGERA 155
           VTIMPKDIQLARRIRGERA
Sbjct: 122 VTIMPKDIQLARRIRGERA 140

[Close]

BLAST of Spg033882 vs. ExPASy TrEMBL
Match: F6HRP4 (Histone domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_07s0191g00130 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.2e-66
Identity = 139/150 (92.67%), Postives = 144/150 (96.00%), Query Frame = 0


Query: 5   LIEWRYLICVTSMQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGT 64
           ++++ +LIC     MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGT
Sbjct: 30  MVDFNFLIC----YMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGT 89

Query: 65  VALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFE 124
           VALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFE
Sbjct: 90  VALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFE 149

Query: 125 DTNLCAIHAKRVTIMPKDIQLARRIRGERA 155
           DTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 150 DTNLCAIHAKRVTIMPKDIQLARRIRGERA 175

[Close]

BLAST of Spg033882 vs. ExPASy TrEMBL
Match: A0A6J1GJA9 (Histone H3 OS=Cucurbita moschata OX=3662 GN=LOC111454375 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.2e-66
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 17  MQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS 76
           MQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS
Sbjct: 1   MQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS 60

Query: 77  TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV 136
           TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV
Sbjct: 61  TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV 120

Query: 137 TIMPKDIQLARRIRGERA 155
           TIMPKDIQLARRIRGERA
Sbjct: 121 TIMPKDIQLARRIRGERA 138

[Close]

BLAST of Spg033882 vs. ExPASy TrEMBL
Match: A0A6P6TAN2 (Histone H3 OS=Coffea arabica OX=13443 GN=LOC113699066 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.8e-66
Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 17  MQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS 76
           +QMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS
Sbjct: 3   LQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS 62

Query: 77  TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV 136
           TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV
Sbjct: 63  TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV 122

Query: 137 TIMPKDIQLARRIRGERA 155
           TIMPKDIQLARRIRGERA
Sbjct: 123 TIMPKDIQLARRIRGERA 140

[Close]

BLAST of Spg033882 vs. TAIR 10
Match: AT4G40030.2 (Histone superfamily protein )

HSP 1 Score: 259.2 bits (661), Expect = 2.1e-69
Identity = 141/153 (92.16%), Postives = 144/153 (94.12%), Query Frame = 0


Query: 3   FVLIEWRYLI-CVTSMQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYR 62
           F  IE+R L      ++MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYR
Sbjct: 12  FTTIEFRVLSHSSLKIKMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYR 71

Query: 63  PGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVG 122
           PGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVG
Sbjct: 72  PGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVG 131

Query: 123 LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 155
           LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 132 LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 164

[Close]

BLAST of Spg033882 vs. TAIR 10
Match: AT4G40030.1 (Histone superfamily protein )

HSP 1 Score: 257.7 bits (657), Expect = 6.0e-69
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 19  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 78
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 79  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 138
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 139 MPKDIQLARRIRGERA 155
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of Spg033882 vs. TAIR 10
Match: AT4G40040.1 (Histone superfamily protein )

HSP 1 Score: 257.7 bits (657), Expect = 6.0e-69
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 19  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 78
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 79  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 138
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 139 MPKDIQLARRIRGERA 155
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of Spg033882 vs. TAIR 10
Match: AT4G40040.2 (Histone superfamily protein )

HSP 1 Score: 257.7 bits (657), Expect = 6.0e-69
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 19  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 78
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 79  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 138
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 139 MPKDIQLARRIRGERA 155
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of Spg033882 vs. TAIR 10
Match: AT4G40030.3 (Histone superfamily protein )

HSP 1 Score: 257.7 bits (657), Expect = 6.0e-69
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 19  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 78
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 79  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 138
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 139 MPKDIQLARRIRGERA 155
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

The following BLAST results are available for this feature:

BLAST of Spg033882 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022997287.1	8.1e-68	97.26	histone H3.3 isoform X1 [Cucurbita maxima]	[more]
XP_023002730.1	1.5e-66	100.00	histone H3.3 isoform X1 [Cucurbita maxima] >XP_023537221.1 histone H3.3 isoform ...	[more]
XP_022951614.1	4.5e-66	100.00	histone H3.3 isoform X2 [Cucurbita moschata]	[more]
XP_017230674.1	7.6e-66	95.86	PREDICTED: histone H3.3 isoform X1 [Daucus carota subsp. sativus]	[more]
KAG6585308.1	9.9e-66	98.56	O-fucosyltransferase 7, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Spg033882 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P59169	8.4e-68	100.00	Histone H3.3 OS=Arabidopsis thaliana OX=3702 GN=HTR4 PE=1 SV=2	[more]
Q6RUR1	8.4e-68	100.00	Histone H3.3 OS=Capsicum annuum OX=4072 PE=2 SV=3	[more]
Q71V89	8.4e-68	100.00	Histone H3.3 OS=Gossypium hirsutum OX=3635 GN=HIS3 PE=2 SV=3	[more]
Q3C2E5	8.4e-68	100.00	Histone H3.3 OS=Lolium multiflorum OX=4521 GN=RH3 PE=2 SV=3	[more]
P69245	8.4e-68	100.00	Histone H3.3 OS=Lolium temulentum OX=34176 PE=2 SV=2	[more]

BLAST of Spg033882 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K4K6	3.9e-68	97.26	Histone H3 OS=Cucurbita maxima OX=3661 GN=LOC111492236 PE=3 SV=1	[more]
A0A6J1KPT2	7.4e-67	100.00	Histone H3 OS=Cucurbita maxima OX=3661 GN=LOC111496502 PE=3 SV=1	[more]
F6HRP4	2.2e-66	92.67	Histone domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_07s0191g0013...	[more]
A0A6J1GJA9	2.2e-66	100.00	Histone H3 OS=Cucurbita moschata OX=3662 GN=LOC111454375 PE=3 SV=1	[more]
A0A6P6TAN2	4.8e-66	99.28	Histone H3 OS=Coffea arabica OX=13443 GN=LOC113699066 PE=3 SV=1	[more]

BLAST of Spg033882 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G40030.2	2.1e-69	92.16	Histone superfamily protein	[more]
AT4G40030.1	6.0e-69	100.00	Histone superfamily protein	[more]
AT4G40040.1	6.0e-69	100.00	Histone superfamily protein	[more]
AT4G40040.2	6.0e-69	100.00	Histone superfamily protein	[more]
AT4G40030.3	6.0e-69	100.00	Histone superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000164	Histone H3/CENP-A	PRINTS	PR00622	HISTONEH3	coord: 35..49 score: 92.32 coord: 52..73 score: 91.8 coord: 76..93 score: 97.46 coord: 132..153 score: 94.86 coord: 116..132 score: 96.93 coord: 98..116 score: 82.38 coord: 21..35 score: 97.1
IPR000164	Histone H3/CENP-A	SMART	SM00428	h35	coord: 52..154 e-value: 1.1E-74 score: 264.1
IPR000164	Histone H3/CENP-A	PANTHER	PTHR11426	HISTONE H3	coord: 12..154
IPR000164	Histone H3/CENP-A	PROSITE	PS00959	HISTONE_H3_2	coord: 85..93
IPR000164	Histone H3/CENP-A	PROSITE	PS00322	HISTONE_H3_1	coord: 33..39
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 19..150 e-value: 1.4E-53 score: 180.7
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 20..154 e-value: 9.9E-76 score: 254.1
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 20..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..60
None	No IPR available	PANTHER	PTHR11426:SF198	SUBFAMILY NOT NAMED	coord: 12..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg033882.1	Spg033882.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity