Spg033849 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTACGATACAAACCAAAGCGACAGAGGATCAGAGAATCGGAGAGGAACAGAGGACGGATTTCCGATTGTTCTGTTCCGGTGATCGGCGACGCGGATTACGGCGGAGAAATTCCGGTGAAGAAGAAGGAGGAGGAGGAGGAGGAGCGGATTACTGATTTGGTAAGTAATTTGAAGTTGAAAGAAAAGAGCGGGGTTAGGTTTAGGGTTATTGAATGGAATATAATTGAATACTATACCTGCGGAGTATTAATTTGGGACCGGAGTGGGTAAGGGCATTTGTTTTTGTCTTCCTTTATTAATTGCAATGAGAGAGATAGAGAGAGGGAGAAGTTCTGCGTAATCTGCCATGGCAGGTGAGCTTTTTTGAAGCTGATAACAGAAATAACCAGTTTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTGTGACTCTGCTCCACCATTTATTCAAATTTCACACTCTCTCTGTTCCATAAATTCAACTACCAAACTAGGGCGCGCCTTTAGTCCCTTTTCTACACTCTTCATCTCGGTGAATTCATTTTATATTATCAGGGGGTTTCTGTTTCAGACCCTCCCATCTGTGCTTTCAGAGTTTTATATGGAGGTTGATAATTTTGTTCTTTACAATTTTTCGTTTAACTCTCTATTATATTGTTGTTTGAATTCTTTTTACTTTCCTGTCTGCATATATTTCTTTTTCCTGTTCTCTGATGTTTTGAATTCTTTCTGCTCGTTTACTTTTTTTCTCCTAAAGATTGAGGTGGAGGTTGGGGGTTGGGGTTGATTTCATCATTAGTTGAAGATAAAGGAGAATGGGTGGGGGAATTTTGATAAAGGGGGATTCACGAACCTTTTTTTTTTTTGTTAATCATTTTAAGTTATGATGTTTCTGTTGAAAGTTTTGTTTGCTTTTGAAAAGTTCTTCCGACTTTTTTACCACTCGTCTTTTTCTCTTTTTATTTTTGAGTATTGGTAAGTTGGTAACAGGCTTTGGATTCCCAGCACGTATAGCCCAGAGAATTTTTTTATTTATATTTTAAAGCAAGTTATCATGTAATAATGACTTTTTTTGTGCTCTTTACCAGAGGTTAAATTTGGTCTAGAGATTTCTGATTATTTTTCATTTGCTTAGTTAAGCTTTCTGTGTTGGGATTTAGCTTATTTTTCATGCAAAATTCACTGTTTTTTTTATAGTAAATTGCGTATGTTAGTCAGCTGATTCTATATTAGTTTAAATGAGTGATTCTGGAGGGGCCGGACCTCGGCACCTATTCAATCACCTAGGAGCTGACATGTTATTCATTGTATGTAACTGTTGGAATAGTTGGGGGGGGGGGGGGGGGGTCTTCTTTTGGCTTTTGGCTTTTGCCAGTTTGAACTCAACCTTTTCTCTTTATTATCATTAAAATAGATTTGCCTGTTCTGGTTCAGAATAATTGAGATATTACAATTTATGAGGAGAATATTTAGGAGTTTCAATGGGTCACGGTCACAGATGACGATTCATTACTTGGAATAACTACTGTTCTTCACTCTGTTTAAGTATCAAACTGGCTATGAAATTGTTATGTTTGATTGCCAATATTATGGTGGACTACAAAATTTATATTTTTCTCTTTATTTTAACCTCAGCTTCTTTTCTTCTTCGTCTTCCCATTCGTTTACAAAGTTGTAGAATTTCTGTTTCGATAAATTGATGTTTTTTGGCAGGTTTGCTTAGGTTCTGCTGACTGTTGCATGTTCATGCTATCTTTCCTGAAGTTGGATTCTTTTGAAGGTCCTTTTGTCTCCATGATTTCTATAAACTATGAAACTGGGTAACAACATGTTCTTTTGTCTTGTATTCTACTTGAAAGCTCTGCATTTTAATTACTGTTATTATTTCCTCTTTGCTTTTTTTTTACCCAATGATCGTATGATGTTTAGTACAAGAAGAGATTATTTTGTCCAATTTGTCAATCTACTGCTTTTTGTCCAGTTTGCGGTTCTAACTTGCATCTGGTAATTATATATCTGCAGAAAGTGATCCTCCATTTTACCATTCAATGCCCAGCCCAAAGTGTGTTCCAGAATCTCTCGAATGCAATTACAGTACTGAGTTGCAACACCAGGTCATGAGTAACAATCCTATTGGTCTCTCATGTCAAGAGAAGATAAACCAGGAGGATGCGATTAAATCTTCGTATTCTACTGAAGATGGGAATAGTTGCATGACTACTAAAATTAACTGCTCGTCTGTATATGGTTTTGATGATAATGCTGATGGTATTAGTGCATTTATGGCACCATCCAGTAAGAAAATTTCGGACTCATATGTGGACAAAAGTGTCATGGAATATCAAATGTCAAAAACGATAGTTTGTGACAAAGAAATTAATGTCAATGATGTGAAGGACATCTGCGTTGATGAAGGGGTGTCTTCTTTGGGCAATTTCTTCCTTAGGAGTACGGATGAGAAGTCAATCTGCAAAATCCTGGTTCTGGAGGAAGACCAAAATGAAGGTTCTATAAAAGAACAAGAGAATTCTTCTGAGGTGGCCAAGTCCATCGCAGATGATAAAAAAATCTCTTTAGAAGATTACTTTGCCATGGACTGGACTACTCATAATGATGATAGGGATTTGAATCAGATAGAGGAAGCAAAACTCAATCTGAGTGAACCACAAGTTTCAATGCAAAAACTAGTTAGAAAAAGTTTCTCTTCCGAGTCTTTAGACAACATGGGTGTCCAGGTATGCATATTTCTGGCCAAGTTATTCATCATGTTCCTCTTGCACTTCATGTTTGTTCTATTTTTATTCTGCATATTTTGAAGGAAGCTCGTTTTGAATCATAACTAATGCAATAAATAGTAGAATGCAAGGGTGTCCTTTCAGGACAATGATGAAGGATATATAAGAAGGATAGAATATTAAAGCCATTTTAGCTCAAGTGATTCAGAACTTCTCAGGTTTGATGCTTTTCACTTCAGTATTTGTTGATGTAAATTCGATTTCTTTTGATTGCAGATCTCTGGTGAAAAAGCAAACAAGGAAGACCCTGCTTCAGCTTCCAAATCTGTTGAACCTTGCAATGGCAATTCTACTCTGGGTTCTGCAGCAGAATCACCAAACAATAACATCCCAACACATCCTGAATTTGAGAATGGAAGTATTACATTTAATTTCAATTCAATCTCTCCCGTGGCCAGTGGCGGAGAAGATCATGGAAATACCAACTTAAACTATCCAGCACCCATGTCCAGTAGTGCAGGGACGCAGGAGTGTCATGGAAGTAGCGATTCTGCAACTGGACCCCAAGTTTCAACCAATCTGGACTTGAGAACTTCAGATAGTCGATTAGTTTCAAGTCAGACCCCGCACGACATTGGCGAGTCTAGTTTCTCTGCTGTAGATCCATTAGCTAGTCTTGTTACTTACTCGGGGCCAATAGCTTATTCTGGAAGCATCTCTCTTCGATCAGAAAGTAGCACAACAAGCACACGGTCTTTTGCCTTTCCCATGTAAGTTGCAATCTAACTTCACCTCCCAAGCTTCTTTTTTATCAATCCTTTTCTAAATTGTAATCTAAGGTAATTTATATTTGCTATCTGGGTTTACAGATTACAGTCAGAATGGAATAGTAGCCCGGTTAAAATGGTGAAAGCTGAACGGAGGCATTACCGGAAGTACAGAGGTTGGAGGGAGGGCCTTCTATGTTGCAGATTCTGAGTGGTTCTTTGCTATCAGTAGAGTTAGATCCTGTTTGTGCATCATCAAAATTTATTTTCACACATGTAAGTAGATGTATTGTTTACTGGAGGCTGTGCATTTCATTCATAGTCATTCTTTACAGTTTGGCCTATTATGTGAAATTTAAGTTACTAGTAATACATCATCTCTTTCTCTCTTTCTCTGGCTTCTTTCTTGTTTCCAATCACTCATTCATGTTGCTCTGTGATGTGTATAAGAATGATGTGACATGGTTGCTCTGCTTGGAATGATACTATGCCCA TTACGATACAAACCAAAGCGACAGAGGATCAGAGAATCGGAGAGGAACAGAGGACGGATTTCCGATTGTTCTGTTCCGGTGATCGGCGACGCGGATTACGGCGGAGAAATTCCGGTGAAGAAGAAGGAGGAGGAGGAGGAGGAGCGGATTACTGATTTGGTTTGCTTAGGTTCTGCTGACTGTTGCATGTTCATGCTATCTTTCCTGAAGTTGGATTCTTTTGAAGAAAGTGATCCTCCATTTTACCATTCAATGCCCAGCCCAAAGTGTGTTCCAGAATCTCTCGAATGCAATTACAGTACTGAGTTGCAACACCAGGTCATGAGTAACAATCCTATTGGTCTCTCATGTCAAGAGAAGATAAACCAGGAGGATGCGATTAAATCTTCGTATTCTACTGAAGATGGGAATAGTTGCATGACTACTAAAATTAACTGCTCGTCTGTATATGGTTTTGATGATAATGCTGATGGTATTAGTGCATTTATGGCACCATCCAGTAAGAAAATTTCGGACTCATATGTGGACAAAAGTGTCATGGAATATCAAATGTCAAAAACGATAGTTTGTGACAAAGAAATTAATGTCAATGATGTGAAGGACATCTGCGTTGATGAAGGGGTGTCTTCTTTGGGCAATTTCTTCCTTAGGAGTACGGATGAGAAGTCAATCTGCAAAATCCTGGTTCTGGAGGAAGACCAAAATGAAGGTTCTATAAAAGAACAAGAGAATTCTTCTGAGGTGGCCAAGTCCATCGCAGATGATAAAAAAATCTCTTTAGAAGATTACTTTGCCATGGACTGGACTACTCATAATGATGATAGGGATTTGAATCAGATAGAGGAAGCAAAACTCAATCTGAGTGAACCACAAGTTTCAATGCAAAAACTAGTTAGAAAAAGTTTCTCTTCCGAGTCTTTAGACAACATGGGTGTCCAGAACTTCTCAGCACCCATGTCCAGTAGTGCAGGGACGCAGGAGTGTCATGGAAGTAGCGATTCTGCAACTGGACCCCAAGTTTCAACCAATCTGGACTTGAGAACTTCAGATAGTCGATTAGTTTCAAGTCAGACCCCGCACGACATTGGCGAGTCTAGTTTCTCTGCTGTAGATCCATTAGCTAGTCTTGTTACTTACTCGGGGCCAATAGCTTATTCTGGAAGCATCTCTCTTCGATCAGAAAGTAGCACAACAAGCACACGGTCTTTTGCCTTTCCCATATTACAGTCAGAATGGAATAGTAGCCCGGTTAAAATGGTGAAAGCTGAACGGAGGCATTACCGGAAGTACAGAGGTTGGAGGGAGGGCCTTCTATGTTGCAGATTCTGA TTACGATACAAACCAAAGCGACAGAGGATCAGAGAATCGGAGAGGAACAGAGGACGGATTTCCGATTGTTCTGTTCCGGTGATCGGCGACGCGGATTACGGCGGAGAAATTCCGGTGAAGAAGAAGGAGGAGGAGGAGGAGGAGCGGATTACTGATTTGGTTTGCTTAGGTTCTGCTGACTGTTGCATGTTCATGCTATCTTTCCTGAAGTTGGATTCTTTTGAAGAAAGTGATCCTCCATTTTACCATTCAATGCCCAGCCCAAAGTGTGTTCCAGAATCTCTCGAATGCAATTACAGTACTGAGTTGCAACACCAGGTCATGAGTAACAATCCTATTGGTCTCTCATGTCAAGAGAAGATAAACCAGGAGGATGCGATTAAATCTTCGTATTCTACTGAAGATGGGAATAGTTGCATGACTACTAAAATTAACTGCTCGTCTGTATATGGTTTTGATGATAATGCTGATGGTATTAGTGCATTTATGGCACCATCCAGTAAGAAAATTTCGGACTCATATGTGGACAAAAGTGTCATGGAATATCAAATGTCAAAAACGATAGTTTGTGACAAAGAAATTAATGTCAATGATGTGAAGGACATCTGCGTTGATGAAGGGGTGTCTTCTTTGGGCAATTTCTTCCTTAGGAGTACGGATGAGAAGTCAATCTGCAAAATCCTGGTTCTGGAGGAAGACCAAAATGAAGGTTCTATAAAAGAACAAGAGAATTCTTCTGAGGTGGCCAAGTCCATCGCAGATGATAAAAAAATCTCTTTAGAAGATTACTTTGCCATGGACTGGACTACTCATAATGATGATAGGGATTTGAATCAGATAGAGGAAGCAAAACTCAATCTGAGTGAACCACAAGTTTCAATGCAAAAACTAGTTAGAAAAAGTTTCTCTTCCGAGTCTTTAGACAACATGGGTGTCCAGAACTTCTCAGCACCCATGTCCAGTAGTGCAGGGACGCAGGAGTGTCATGGAAGTAGCGATTCTGCAACTGGACCCCAAGTTTCAACCAATCTGGACTTGAGAACTTCAGATAGTCGATTAGTTTCAAGTCAGACCCCGCACGACATTGGCGAGTCTAGTTTCTCTGCTGTAGATCCATTAGCTAGTCTTGTTACTTACTCGGGGCCAATAGCTTATTCTGGAAGCATCTCTCTTCGATCAGAAAGTAGCACAACAAGCACACGGTCTTTTGCCTTTCCCATATTACAGTCAGAATGGAATAGTAGCCCGGTTAAAATGGTGAAAGCTGAACGGAGGCATTACCGGAAGTACAGAGGTTGGAGGGAGGGCCTTCTATGTTGCAGATTCTGA LRYKPKRQRIRESERNRGRISDCSVPVIGDADYGGEIPVKKKEEEEEERITDLVCLGSADCCMFMLSFLKLDSFEESDPPFYHSMPSPKCVPESLECNYSTELQHQVMSNNPIGLSCQEKINQEDAIKSSYSTEDGNSCMTTKINCSSVYGFDDNADGISAFMAPSSKKISDSYVDKSVMEYQMSKTIVCDKEINVNDVKDICVDEGVSSLGNFFLRSTDEKSICKILVLEEDQNEGSIKEQENSSEVAKSIADDKKISLEDYFAMDWTTHNDDRDLNQIEEAKLNLSEPQVSMQKLVRKSFSSESLDNMGVQNFSAPMSSSAGTQECHGSSDSATGPQVSTNLDLRTSDSRLVSSQTPHDIGESSFSAVDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCRF Homology
BLAST of Spg033849 vs. NCBI nr
Match: XP_022132338.1 (uncharacterized protein LOC111005214 [Momordica charantia] >XP_022132339.1 uncharacterized protein LOC111005214 [Momordica charantia] >XP_022132340.1 uncharacterized protein LOC111005214 [Momordica charantia] >XP_022132341.1 uncharacterized protein LOC111005214 [Momordica charantia] >XP_022132342.1 uncharacterized protein LOC111005214 [Momordica charantia]) HSP 1 Score: 518.8 bits (1335), Expect = 4.4e-143 Identity = 293/438 (66.89%), Postives = 322/438 (73.52%), Query Frame = 0
BLAST of Spg033849 vs. NCBI nr
Match: XP_038886032.1 (uncharacterized protein LOC120076323 [Benincasa hispida] >XP_038886033.1 uncharacterized protein LOC120076323 [Benincasa hispida] >XP_038886034.1 uncharacterized protein LOC120076323 [Benincasa hispida] >XP_038886035.1 uncharacterized protein LOC120076323 [Benincasa hispida] >XP_038886036.1 uncharacterized protein LOC120076323 [Benincasa hispida] >XP_038886037.1 uncharacterized protein LOC120076323 [Benincasa hispida] >XP_038886038.1 uncharacterized protein LOC120076323 [Benincasa hispida] >XP_038886039.1 uncharacterized protein LOC120076323 [Benincasa hispida] >XP_038886040.1 uncharacterized protein LOC120076323 [Benincasa hispida]) HSP 1 Score: 516.5 bits (1329), Expect = 2.2e-142 Identity = 290/437 (66.36%), Postives = 319/437 (73.00%), Query Frame = 0
BLAST of Spg033849 vs. NCBI nr
Match: XP_023538554.1 (uncharacterized protein LOC111799296 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023538555.1 uncharacterized protein LOC111799296 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 503.8 bits (1296), Expect = 1.5e-138 Identity = 288/445 (64.72%), Postives = 317/445 (71.24%), Query Frame = 0
BLAST of Spg033849 vs. NCBI nr
Match: KAG6585259.1 (hypothetical protein SDJN03_17992, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 503.4 bits (1295), Expect = 1.9e-138 Identity = 287/445 (64.49%), Postives = 317/445 (71.24%), Query Frame = 0
BLAST of Spg033849 vs. NCBI nr
Match: XP_023002043.1 (uncharacterized protein LOC111496042 isoform X1 [Cucurbita maxima] >XP_023002044.1 uncharacterized protein LOC111496042 isoform X1 [Cucurbita maxima] >XP_023002045.1 uncharacterized protein LOC111496042 isoform X1 [Cucurbita maxima] >XP_023002046.1 uncharacterized protein LOC111496042 isoform X1 [Cucurbita maxima]) HSP 1 Score: 501.1 bits (1289), Expect = 9.6e-138 Identity = 287/445 (64.49%), Postives = 317/445 (71.24%), Query Frame = 0
BLAST of Spg033849 vs. ExPASy TrEMBL
Match: A0A6J1BS70 (uncharacterized protein LOC111005214 OS=Momordica charantia OX=3673 GN=LOC111005214 PE=4 SV=1) HSP 1 Score: 518.8 bits (1335), Expect = 2.2e-143 Identity = 293/438 (66.89%), Postives = 322/438 (73.52%), Query Frame = 0
BLAST of Spg033849 vs. ExPASy TrEMBL
Match: A0A6J1KPB6 (uncharacterized protein LOC111496042 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496042 PE=4 SV=1) HSP 1 Score: 501.1 bits (1289), Expect = 4.6e-138 Identity = 287/445 (64.49%), Postives = 317/445 (71.24%), Query Frame = 0
BLAST of Spg033849 vs. ExPASy TrEMBL
Match: A0A6J1GGY0 (uncharacterized protein LOC111454119 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454119 PE=4 SV=1) HSP 1 Score: 492.3 bits (1266), Expect = 2.2e-135 Identity = 285/446 (63.90%), Postives = 316/446 (70.85%), Query Frame = 0
BLAST of Spg033849 vs. ExPASy TrEMBL
Match: A0A1S3BDI6 (uncharacterized protein LOC103488449 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488449 PE=4 SV=1) HSP 1 Score: 491.5 bits (1264), Expect = 3.7e-135 Identity = 283/427 (66.28%), Postives = 312/427 (73.07%), Query Frame = 0
BLAST of Spg033849 vs. ExPASy TrEMBL
Match: A0A6J1KID4 (uncharacterized protein LOC111496042 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496042 PE=4 SV=1) HSP 1 Score: 481.9 bits (1239), Expect = 2.9e-132 Identity = 277/431 (64.27%), Postives = 307/431 (71.23%), Query Frame = 0
BLAST of Spg033849 vs. TAIR 10
Match: AT2G03810.1 (18S pre-ribosomal assembly protein gar2-related ) HSP 1 Score: 114.8 bits (286), Expect = 1.8e-25 Identity = 121/385 (31.43%), Postives = 177/385 (45.97%), Query Frame = 0
BLAST of Spg033849 vs. TAIR 10
Match: AT2G03810.2 (18S pre-ribosomal assembly protein gar2-related ) HSP 1 Score: 114.8 bits (286), Expect = 1.8e-25 Identity = 121/385 (31.43%), Postives = 177/385 (45.97%), Query Frame = 0
BLAST of Spg033849 vs. TAIR 10
Match: AT2G03810.3 (18S pre-ribosomal assembly protein gar2-related ) HSP 1 Score: 114.8 bits (286), Expect = 1.8e-25 Identity = 121/385 (31.43%), Postives = 177/385 (45.97%), Query Frame = 0
BLAST of Spg033849 vs. TAIR 10
Match: AT2G03810.4 (18S pre-ribosomal assembly protein gar2-related ) HSP 1 Score: 114.8 bits (286), Expect = 1.8e-25 Identity = 121/385 (31.43%), Postives = 177/385 (45.97%), Query Frame = 0
BLAST of Spg033849 vs. TAIR 10
Match: AT1G13650.2 (BEST Arabidopsis thaliana protein match is: 18S pre-ribosomal assembly protein gar2-related (TAIR:AT2G03810.4); Has 3688 Blast hits to 1629 proteins in 255 species: Archae - 22; Bacteria - 222; Metazoa - 684; Fungi - 292; Plants - 62; Viruses - 14; Other Eukaryotes - 2392 (source: NCBI BLink). ) HSP 1 Score: 66.6 bits (161), Expect = 5.6e-11 Identity = 38/84 (45.24%), Postives = 49/84 (58.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|