Spg033790 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg033790
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold13: 34577616 .. 34577960 (-)
RNA-Seq Expression	Spg033790
Synteny	Spg033790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCGTTGCACAAAGCCGCCAAAGGTGGTGTTTGGAGGTCACCGCCACCAGAGCTGTGATGAATTCGAGGTAACAATCAATGGCAGCGCTACGGTTCAACAAGGGAAGAAGAAGTCACGCCTATACGGGACTCTACGGCTTGAACTCGCCCCTGGTTGGGTGTCCTTACTGCTCACCGTGTTGTCGGAGGTACGCTCGTCGGAGATGAAGAAGAAGGAGACGAAGCGAAGAATAGCTGAAGGAAGGAAACGCCCTTTTCAACACCTCCTCCGCACCCAAACCAGTAATAATCGTCACTCCATTGACCGAATCCCAGGTTCAACCGACGATGACGAGATTTAG

mRNA sequence

ATGGGTCGTTGCACAAAGCCGCCAAAGGTGGTGTTTGGAGGTCACCGCCACCAGAGCTGTGATGAATTCGAGGTAACAATCAATGGCAGCGCTACGGTTCAACAAGGGAAGAAGAAGTCACGCCTATACGGGACTCTACGGCTTGAACTCGCCCCTGGTTGGGTGTCCTTACTGCTCACCGTGTTGTCGGAGGTACGCTCGTCGGAGATGAAGAAGAAGGAGACGAAGCGAAGAATAGCTGAAGGAAGGAAACGCCCTTTTCAACACCTCCTCCGCACCCAAACCAGTAATAATCGTCACTCCATTGACCGAATCCCAGGTTCAACCGACGATGACGAGATTTAG

Coding sequence (CDS)

ATGGGTCGTTGCACAAAGCCGCCAAAGGTGGTGTTTGGAGGTCACCGCCACCAGAGCTGTGATGAATTCGAGGTAACAATCAATGGCAGCGCTACGGTTCAACAAGGGAAGAAGAAGTCACGCCTATACGGGACTCTACGGCTTGAACTCGCCCCTGGTTGGGTGTCCTTACTGCTCACCGTGTTGTCGGAGGTACGCTCGTCGGAGATGAAGAAGAAGGAGACGAAGCGAAGAATAGCTGAAGGAAGGAAACGCCCTTTTCAACACCTCCTCCGCACCCAAACCAGTAATAATCGTCACTCCATTGACCGAATCCCAGGTTCAACCGACGATGACGAGATTTAG

Protein sequence

MGRCTKPPKVVFGGHRHQSCDEFEVTINGSATVQQGKKKSRLYGTLRLELAPGWVSLLLTVLSEVRSSEMKKKETKRRIAEGRKRPFQHLLRTQTSNNRHSIDRIPGSTDDDEI

Homology

The following BLAST results are available for this feature:

BLAST of Spg033790 vs.


Match Name	E-value	Identity	Description

BLAST of Spg033790 vs.


Match Name	E-value	Identity	Description

BLAST of Spg033790 vs.


Match Name	E-value	Identity	Description

BLAST of Spg033790 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg033790.1	Spg033790.1	mRNA