Spg033727 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg033727
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold13: 39155849 .. 39156145 (-)
RNA-Seq ExpressionSpg033727
SyntenySpg033727
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCACCTCACCCTCGTTCCGTCGACAGGAACGTCGCCGGAGATCAAAATGACGCGGAGACGGAGGCGGAGGCGGAGGCGGCGACGGACCCAGATGTGACGAGGTATATTCTGGTGAAGTCTTCTCACTCCACCCAAGTACTGGAGAAGGAGGTGGTGCTGCGGCGGATCCGGCAGCGAAAGCGGGTTAACAAGCTCCGGGCGGTGGTCGGAGCTCTGTTCAGTTCACCGTTCACCGACAAAACCGGCGAAACTCGTCAGAGAAAATGGGTGGACGAACCCTTCACTTCACTCTAG

mRNA sequence

ATGTCACCTCACCCTCGTTCCGTCGACAGGAACGTCGCCGGAGATCAAAATGACGCGGAGACGGAGGCGGAGGCGGAGGCGGCGACGGACCCAGATGTGACGAGGTATATTCTGGTGAAGTCTTCTCACTCCACCCAAGTACTGGAGAAGGAGGTGGTGCTGCGGCGGATCCGGCAGCGAAAGCGGGTTAACAAGCTCCGGGCGGTGGTCGGAGCTCTGTTCAGTTCACCGTTCACCGACAAAACCGGCGAAACTCGTCAGAGAAAATGGGTGGACGAACCCTTCACTTCACTCTAG

Coding sequence (CDS)

ATGTCACCTCACCCTCGTTCCGTCGACAGGAACGTCGCCGGAGATCAAAATGACGCGGAGACGGAGGCGGAGGCGGAGGCGGCGACGGACCCAGATGTGACGAGGTATATTCTGGTGAAGTCTTCTCACTCCACCCAAGTACTGGAGAAGGAGGTGGTGCTGCGGCGGATCCGGCAGCGAAAGCGGGTTAACAAGCTCCGGGCGGTGGTCGGAGCTCTGTTCAGTTCACCGTTCACCGACAAAACCGGCGAAACTCGTCAGAGAAAATGGGTGGACGAACCCTTCACTTCACTCTAG

Protein sequence

MSPHPRSVDRNVAGDQNDAETEAEAEAATDPDVTRYILVKSSHSTQVLEKEVVLRRIRQRKRVNKLRAVVGALFSSPFTDKTGETRQRKWVDEPFTSL
Homology
BLAST of Spg033727 vs. NCBI nr
Match: KAA0065270.1 (hypothetical protein E6C27_scaffold82G006120 [Cucumis melo var. makuwa])

HSP 1 Score: 136.7 bits (343), Expect = 1.1e-28
Identity = 74/100 (74.00%), Postives = 80/100 (80.00%), Query Frame = 0

Query: 1   MSPHPRSVDRNVAGDQNDAETEAEAEAATDPDVTRYILVKS--SHSTQVLEKEVVLRRIR 60
           MSP P SV++ + GDQ +AE E E  AA  P VTR+I+VKS  SHS Q LEK VVLRRIR
Sbjct: 4   MSPRPYSVEKKIDGDQVEAEIETEVSAALGPAVTRHIVVKSSPSHSNQALEKAVVLRRIR 63

Query: 61  QRKRVNKLRAVVGALFSSPFTDKTGETRQRKWVDEPFTSL 99
           QRKRVNKLRA VGALFSSPFTDKT ET QRKWVDEPFTSL
Sbjct: 64  QRKRVNKLRAAVGALFSSPFTDKTEETHQRKWVDEPFTSL 103

BLAST of Spg033727 vs. NCBI nr
Match: KAG6598407.1 (hypothetical protein SDJN03_08185, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 136.0 bits (341), Expect = 1.8e-28
Identity = 75/100 (75.00%), Postives = 82/100 (82.00%), Query Frame = 0

Query: 1   MSPHPRSVDRNVAGDQNDAETEAEAE-AATDPDVTRYILVKSSHSTQV-LEKEVVLRRIR 60
           MSPHP SV+ ++AG Q +AE E E E AA  PDVTR+I+VKSS STQV LEK VVLRRIR
Sbjct: 4   MSPHPCSVENSIAGAQEEAEMEMETEAAAVGPDVTRHIMVKSSRSTQVSLEKAVVLRRIR 63

Query: 61  QRKRVNKLRAVVGALFSSPFTDKTGETRQRKWVDEPFTSL 99
            RKRVNK +AVVGALFSSPF DK  ETRQRKWVDEPFTSL
Sbjct: 64  HRKRVNKFQAVVGALFSSPFADKADETRQRKWVDEPFTSL 103

BLAST of Spg033727 vs. NCBI nr
Match: KAG6585633.1 (hypothetical protein SDJN03_18366, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020540.1 hypothetical protein SDJN02_17225, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 125.9 bits (315), Expect = 1.9e-25
Identity = 71/98 (72.45%), Postives = 77/98 (78.57%), Query Frame = 0

Query: 1  MSPHPRSVDRNVAGDQNDAETEAEAEAATDPDVTRYILVKSSHSTQVLEKEVVLRRIRQR 60
          +SPH   V     GDQ   +T   A+AA  PDVTR+I +KSSHSTQVLEK VVLRRIRQR
Sbjct: 4  VSPHSYPV-----GDQEKDKT--VADAAASPDVTRHIRLKSSHSTQVLEKAVVLRRIRQR 63

Query: 61 KRVNKLRAVVGALFSSPFTDKTGETRQRKWVDEPFTSL 99
          KRVNK +AVVGALFSSPF DKTGE RQRKWVDEPFTSL
Sbjct: 64 KRVNKFQAVVGALFSSPFGDKTGEARQRKWVDEPFTSL 94

BLAST of Spg033727 vs. NCBI nr
Match: KGN62559.1 (hypothetical protein Csa_022598 [Cucumis sativus])

HSP 1 Score: 117.9 bits (294), Expect = 5.1e-23
Identity = 71/110 (64.55%), Postives = 79/110 (71.82%), Query Frame = 0

Query: 1   MSPHPRSVDRNVAGDQNDAETEAEAEA------ATDPDVTRYILVKSS------HSTQVL 60
           MSP P SV++ +AGDQ +AE E E+ A      A  P VTR+I+VKSS       S Q L
Sbjct: 4   MSPQPYSVEKKIAGDQVEAEIETESAAAGAGADALGPAVTRHIVVKSSSSSSSYQSNQAL 63

Query: 61  EKEVVLRRIRQRKRVNKLRAVVGALFSSPFTDKTGETRQRKWVDEPFTSL 99
           EK VVLRRIRQRKRVNKLRA VGALFSSPFTDKT    +RKWVDEPFTSL
Sbjct: 64  EKAVVLRRIRQRKRVNKLRAAVGALFSSPFTDKT----ERKWVDEPFTSL 109

BLAST of Spg033727 vs. NCBI nr
Match: KAG7029360.1 (Wall-associated receptor kinase-like 14, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 107.1 bits (266), Expect = 8.9e-20
Identity = 62/87 (71.26%), Postives = 69/87 (79.31%), Query Frame = 0

Query: 1  MSPHPRSVDRNVAGDQNDAETEAEAE-AATDPDVTRYILVKSSHSTQV-LEKEVVLRRIR 60
          MSPHP SV+ ++AG Q +AE E E E AA  PDVTR+I+VKSS STQV LEK VVLRRIR
Sbjct: 4  MSPHPCSVENSIAGAQEEAEMEMETEAAAVGPDVTRHIMVKSSRSTQVSLEKAVVLRRIR 63

Query: 61 QRKRVNKLRAVVGALFSSPFTDKTGET 86
           RKRVNK +AVVGALFSSPF DK  ET
Sbjct: 64 HRKRVNKFQAVVGALFSSPFADKADET 90

BLAST of Spg033727 vs. ExPASy TrEMBL
Match: A0A5A7VDJ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G006120 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 5.1e-29
Identity = 74/100 (74.00%), Postives = 80/100 (80.00%), Query Frame = 0

Query: 1   MSPHPRSVDRNVAGDQNDAETEAEAEAATDPDVTRYILVKS--SHSTQVLEKEVVLRRIR 60
           MSP P SV++ + GDQ +AE E E  AA  P VTR+I+VKS  SHS Q LEK VVLRRIR
Sbjct: 4   MSPRPYSVEKKIDGDQVEAEIETEVSAALGPAVTRHIVVKSSPSHSNQALEKAVVLRRIR 63

Query: 61  QRKRVNKLRAVVGALFSSPFTDKTGETRQRKWVDEPFTSL 99
           QRKRVNKLRA VGALFSSPFTDKT ET QRKWVDEPFTSL
Sbjct: 64  QRKRVNKLRAAVGALFSSPFTDKTEETHQRKWVDEPFTSL 103

BLAST of Spg033727 vs. ExPASy TrEMBL
Match: A0A0A0LNJ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360760 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 2.5e-23
Identity = 71/110 (64.55%), Postives = 79/110 (71.82%), Query Frame = 0

Query: 1   MSPHPRSVDRNVAGDQNDAETEAEAEA------ATDPDVTRYILVKSS------HSTQVL 60
           MSP P SV++ +AGDQ +AE E E+ A      A  P VTR+I+VKSS       S Q L
Sbjct: 4   MSPQPYSVEKKIAGDQVEAEIETESAAAGAGADALGPAVTRHIVVKSSSSSSSYQSNQAL 63

Query: 61  EKEVVLRRIRQRKRVNKLRAVVGALFSSPFTDKTGETRQRKWVDEPFTSL 99
           EK VVLRRIRQRKRVNKLRA VGALFSSPFTDKT    +RKWVDEPFTSL
Sbjct: 64  EKAVVLRRIRQRKRVNKLRAAVGALFSSPFTDKT----ERKWVDEPFTSL 109

BLAST of Spg033727 vs. ExPASy TrEMBL
Match: A0A2N9G0R5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20842 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.4e-10
Identity = 44/96 (45.83%), Postives = 58/96 (60.42%), Query Frame = 0

Query: 5   PRSVDRNVAGDQNDAETEAEAEAATDPDVTRYILVKSSHSTQVLEKEVVLRRIRQRKRVN 64
           P  VD N       A  E +    T   VT ++ +K +HSTQ L+KEVVLRRIRQRKRVN
Sbjct: 10  PTVVDANAENMNIIAVDEEQEVPETQNPVTSHLYIKPTHSTQPLDKEVVLRRIRQRKRVN 69

Query: 65  KLRAVVGALFSSPFTDKTGE--TRQRKWVDEPFTSL 99
           K++A   AL SSPF+ K  +    ++KW D+ F +L
Sbjct: 70  KVKATFQALVSSPFSAKPDKVSVHKKKWADDAFAAL 105

BLAST of Spg033727 vs. ExPASy TrEMBL
Match: A0A2C9VX00 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_05G166500 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 9.0e-10
Identity = 41/96 (42.71%), Postives = 54/96 (56.25%), Query Frame = 0

Query: 3   PHPRSVDRNVAGDQNDAETEAEAEAATDPDVTRYILVKSSHSTQVLEKEVVLRRIRQRKR 62
           P     + N   + N  E E + E  +   VT ++L+K +HS Q L KEVVLRRIRQRKR
Sbjct: 10  PTLSEAENNTNSNNNSREHEDDPEIGSSVPVTSHVLLKPAHSNQTLNKEVVLRRIRQRKR 69

Query: 63  VNKLRAVVGALFSSPFTDKTGETRQRKWVDEPFTSL 99
            NK+RA V   F    + KT +    KWVD+ F +L
Sbjct: 70  HNKVRAAVQGFFGLRDSSKTDDRVSVKWVDDAFAAL 105

BLAST of Spg033727 vs. ExPASy TrEMBL
Match: A0A7J7D397 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW11G00807 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.2e-09
Identity = 40/98 (40.82%), Postives = 62/98 (63.27%), Query Frame = 0

Query: 3   PHPRSVDRNVAGDQNDAETEAEAEAATDPDVTRYILVKSSHSTQVLEKEVVLRRIRQRKR 62
           PH  +++ N   DQ D E            VT ++ +K +H+TQ L++EVVLRRIR RKR
Sbjct: 12  PHYTNINCNPIEDQEDPE--------ISNSVTTHLYLKPAHTTQTLDREVVLRRIRNRKR 71

Query: 63  VNKLRAVVGALFSSPFTDKTGETR--QRKWVDEPFTSL 99
           VNK++A + +LF SP + +T +T   +++WVD+ F +L
Sbjct: 72  VNKIKAALLSLFGSPISSETEKTSVDKKRWVDDAFAAL 101

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0065270.11.1e-2874.00hypothetical protein E6C27_scaffold82G006120 [Cucumis melo var. makuwa][more]
KAG6598407.11.8e-2875.00hypothetical protein SDJN03_08185, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6585633.11.9e-2572.45hypothetical protein SDJN03_18366, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN62559.15.1e-2364.55hypothetical protein Csa_022598 [Cucumis sativus][more]
KAG7029360.18.9e-2071.26Wall-associated receptor kinase-like 14, partial [Cucurbita argyrosperma subsp. ... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7VDJ55.1e-2974.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0LNJ02.5e-2364.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360760 PE=4 SV=1[more]
A0A2N9G0R52.4e-1045.83Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20842 PE=4 SV=1[more]
A0A2C9VX009.0e-1042.71Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_05G166500 PE=4 SV=... [more]
A0A7J7D3971.2e-0940.82Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW11G00807 ... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availablePANTHERPTHR35324:SF4BNAA08G03750D PROTEINcoord: 12..98
NoneNo IPR availablePANTHERPTHR35324BNAA08G03750D PROTEINcoord: 12..98

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg033727.1Spg033727.1mRNA