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Spg033710 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTCTTCATCTTCAAGCTCGAACGTGTGGACTTCAAAGCAAAACAAGCTGTTCGAGAATGCTCTGACGGTGTACGACAAGGACTCGCCGGACCGGTGGCAGAAGCTGGCGAGAGCCGTCGGCGGAAAGACGGCGGAGGAAGTGAAGAGGCACTACGAGCTGCTGGTGGAGGACGTCCACAATATTGAGACCGGCAGAATTCCTTTGCCCAATTACTCTAACTTTCTTGATGAAGAACAAAGGCAATCTCTCTCTCTCTCTCTTTTTCTATTCAATCTATTTGGGGTAAGATCTTGATTTTTTTTTTTTTTTTTTTTTTGAGATACATCAACATTTGGGGTGGGAGATTCGAACTTCTGACCTCTTGGTCGAGAGTACATGTCAATTACGGTTGAGCTTTGACGATCTTGAAATTAATTAGTATACTTTGATTGTTGATTTCATCAAAACTTAGCCATACATACTTGGTTGCAGCTTCTATTAACTTTCGGATGTGGTGTATTTTTTTAGTGGCAAAAAGAATTTTAGTTAGGACTTCTTTTAAATACAAAAGAAATTAATAGACAAATAAAAAATGCACTAGGGTAGCCAACATGACCGTAGCTTAATTGGCATAACTCTTGTATTAACGACCAAAAAGTCTGTGGTTCTAGTTCGATAAACATTTGATTTTTTGTTTTTTTGTTTTTTAAAATTAAGCTTATAAACACTACTACCTTCCACCTACAAGTTTTAGGAATTTGTTAGGAATTCAAATGTGTCTTTAACAAAAATGAAGACCGTTGTAAGAAAATTGGATGAAAACAAGCATAATTTTCAAAAACCAAAAATCAAATAGTTATCAAATGAGACCCAAGAAATCTTACTAACCGATGTTAGGCAAGTATTGTTTTTCTTAATATATGTGTGTTCAAAGCATTAGCTAGGATGATAAATGAGAGAAAAAGTATATATTATTATTTTATAGTTATTTAGATGAATAAAAATATGTCGCTATCAATTAAAAGGAGTGATTCCCTTATGAATTGGTTTAGATTGAGATATTCTTTAAACTCATGCAATTGTTCTTCCGTTATAAATTTCTTTAACTAAAAACGACCTTTATTAAATAAACTCAATCTAACCCGACCATAAAATTCAAGAAATCACTCTCAACCATTGAAATTAAGTTTAAGGACTCACTTTCAATATATTTTATGAAAAAAATAATAATTTTAAAAGTTGTTGGGTATAAATAATCTTAAATAGAATTATAGAATGAAATAAAATTAATGTTTAGAAGTAATAAGTGGGAGTGCTAATTAATGTCTAATTATTTTGGGGACTTTTATTCATTGATCAAAATGCTAATAGTGGATGCTTTCTCTTTGGTTTATGCAGATTGAAGGGTCTAAAGCTACAATGATATTGCAACAACAAACAAGATTGAAGTAAAAGAGAATAAAAGCTATTGGATTTCAACCAAAGCTCCAAACTGAAAAGCACTTTGTAGATATATATATAAAAGAAGAATATCATTCTACATGTGAATTATATGGTTTTTTTCCACTATATATATGAGGCATTTATGCTGTATAAAATGCCATATATTTTGATTAATTTGCTATATTTTATGTAGCTAATTAGTCTCATCCTTTTGCAATATAAGTATAATATACATAAAAGTTCATTGGGGAAATTAATGGAAGTGTATAGTGAATGATGTTTTTTTTTTTTTTTTTTTTTCCTTTCCATAATGTCAAATATGTTATTAAAGGAATATTTAGAAATGTAACAAAATATTGATAATATGAATATAAAAATTAATAATTGAAGTTCTTTTTTTCTTTTTCTTGAGAATATCACACAATACAAATAGAGGAGTGGTTTGGATTTTCAACCTAGCCTTAACTACTATGATACATTCATGTTAGGTGATTAATAATTAATTTAAGGAGAAGTCCAATTTATTTATTAATTTAAATAGTTTTGATGAGTTCATGTATTTTTACATTTTATTTAAAATTTTGTCCAAATTTAGTATTTACCTTCTTGCATAGAATCAAGAGCTTTTTTTTTTTTTTTTTTTTTTGCAAATGGAAGGTTAATTAGGGCATGTTTGGGCTGCCATTTTCCAAAGTCCGGATTTTCTACACCCAACTTCGATAGTGAACACTGTTGAAGTCGAACAGTAACCTTCATTTTCACGCTTCTCTCTCCCACCTCGTTTCTCTCTCGTCTAGTTTCACGCATCTCTCTCCCTTTTTGTTTCTCTCATTCTTTGTTTCCATCCTACCGTCGATGTCTTCAGATTTGGGGTGGAGTGGGTTTTTTTTCGGTTTTTTTTTCATATTCGGTTTTGAAGAAGAGAAGAGGATGGGTTTTTCCAGTTTTCTACTGGGTGGATTTTTTTTCTAGGCGGTGGAAATGGGGGTGGCAACGAAGAGAAGAAAAGGGGATGGAAAAAATGGGGGTGGGGGAGGGTTTGTTGAGGAAGGGGAAGATGGGAGGGGTGGGGGAAGAGTTTGTTGAGGAAAAGAAGAAAATGAGAAGGGTGGCGCAGTGGTTGTCGATGATGAAGAAGAAAGCAACGGCAGCGGCGGCAACCGACGAGAAGAGGAGAGAGAGGAATCGATGGTAG ATGAGTTCTTCATCTTCAAGCTCGAACGTGTGGACTTCAAAGCAAAACAAGCTGTTCGAGAATGCTCTGACGGTGTACGACAAGGACTCGCCGGACCGGTGGCAGAAGCTGGCGAGAGCCGTCGGCGGAAAGACGGCGGAGGAAGTGAAGAGGCACTACGAGCTGCTGGTGGAGGACGTCCACAATATTGAGACCGGCAGAATTCCTTTGCCCAATTACTCTAACTTTCTTGATGAAGAACAAAGGCAATCTCTCTCTCTCTCTCTTTTTCTATTCAATCTATTTGGGATTGAAGGGTCTAAAGCTACAATGATATTGCAACAACAAACAAGATTGAAGCGGTGGAAATGGGGGTGGCAACGAAGAGAAGAAAAGGGGATGGAAAAAATGGGGGTGGGGGAGGGTTTGTTGAGGAAGGGGAAGATGGGAGGGGTGGGGGAAGAGTTTGTTGAGGAAAAGAAGAAAATGAGAAGGGTGGCGCAGTGGTTGTCGATGATGAAGAAGAAAGCAACGGCAGCGGCGGCAACCGACGAGAAGAGGAGAGAGAGGAATCGATGGTAG ATGAGTTCTTCATCTTCAAGCTCGAACGTGTGGACTTCAAAGCAAAACAAGCTGTTCGAGAATGCTCTGACGGTGTACGACAAGGACTCGCCGGACCGGTGGCAGAAGCTGGCGAGAGCCGTCGGCGGAAAGACGGCGGAGGAAGTGAAGAGGCACTACGAGCTGCTGGTGGAGGACGTCCACAATATTGAGACCGGCAGAATTCCTTTGCCCAATTACTCTAACTTTCTTGATGAAGAACAAAGGCAATCTCTCTCTCTCTCTCTTTTTCTATTCAATCTATTTGGGATTGAAGGGTCTAAAGCTACAATGATATTGCAACAACAAACAAGATTGAAGCGGTGGAAATGGGGGTGGCAACGAAGAGAAGAAAAGGGGATGGAAAAAATGGGGGTGGGGGAGGGTTTGTTGAGGAAGGGGAAGATGGGAGGGGTGGGGGAAGAGTTTGTTGAGGAAAAGAAGAAAATGAGAAGGGTGGCGCAGTGGTTGTCGATGATGAAGAAGAAAGCAACGGCAGCGGCGGCAACCGACGAGAAGAGGAGAGAGAGGAATCGATGGTAG MSSSSSSSNVWTSKQNKLFENALTVYDKDSPDRWQKLARAVGGKTAEEVKRHYELLVEDVHNIETGRIPLPNYSNFLDEEQRQSLSLSLFLFNLFGIEGSKATMILQQQTRLKRWKWGWQRREEKGMEKMGVGEGLLRKGKMGGVGEEFVEEKKKMRRVAQWLSMMKKKATAAAATDEKRRERNRW Homology
BLAST of Spg033710 vs. NCBI nr
Match: XP_023002559.1 (protein RADIALIS-like 4 [Cucurbita maxima]) HSP 1 Score: 147.9 bits (372), Expect = 8.7e-32 Identity = 76/89 (85.39%), Postives = 79/89 (88.76%), Query Frame = 0
BLAST of Spg033710 vs. NCBI nr
Match: XP_008444713.1 (PREDICTED: protein RADIALIS-like 4 [Cucumis melo]) HSP 1 Score: 147.1 bits (370), Expect = 1.5e-31 Identity = 73/87 (83.91%), Postives = 80/87 (91.95%), Query Frame = 0
BLAST of Spg033710 vs. NCBI nr
Match: XP_031737271.1 (protein RADIALIS-like 4 [Cucumis sativus]) HSP 1 Score: 145.6 bits (366), Expect = 4.3e-31 Identity = 72/88 (81.82%), Postives = 80/88 (90.91%), Query Frame = 0
BLAST of Spg033710 vs. NCBI nr
Match: XP_038886301.1 (protein RADIALIS-like 3 [Benincasa hispida]) HSP 1 Score: 143.3 bits (360), Expect = 2.1e-30 Identity = 71/87 (81.61%), Postives = 78/87 (89.66%), Query Frame = 0
BLAST of Spg033710 vs. NCBI nr
Match: XP_022997502.1 (protein RADIALIS-like 4 [Cucurbita maxima]) HSP 1 Score: 142.5 bits (358), Expect = 3.6e-30 Identity = 72/90 (80.00%), Postives = 78/90 (86.67%), Query Frame = 0
BLAST of Spg033710 vs. ExPASy Swiss-Prot
Match: Q1A173 (Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 4.1e-24 Identity = 52/75 (69.33%), Postives = 62/75 (82.67%), Query Frame = 0
BLAST of Spg033710 vs. ExPASy Swiss-Prot
Match: Q8GW75 (Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.0e-22 Identity = 51/72 (70.83%), Postives = 61/72 (84.72%), Query Frame = 0
BLAST of Spg033710 vs. ExPASy Swiss-Prot
Match: F4JVB8 (Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 8.5e-22 Identity = 47/72 (65.28%), Postives = 58/72 (80.56%), Query Frame = 0
BLAST of Spg033710 vs. ExPASy Swiss-Prot
Match: Q6NNN0 (Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 8.5e-22 Identity = 49/72 (68.06%), Postives = 60/72 (83.33%), Query Frame = 0
BLAST of Spg033710 vs. ExPASy Swiss-Prot
Match: Q1G3C4 (Protein RADIALIS-like 4 OS=Arabidopsis thaliana OX=3702 GN=RL4 PE=2 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 1.9e-21 Identity = 48/75 (64.00%), Postives = 63/75 (84.00%), Query Frame = 0
BLAST of Spg033710 vs. ExPASy TrEMBL
Match: A0A0A0LNL9 (SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G361640 PE=4 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 6.5e-33 Identity = 75/91 (82.42%), Postives = 83/91 (91.21%), Query Frame = 0
BLAST of Spg033710 vs. ExPASy TrEMBL
Match: A0A6J1KQS6 (protein RADIALIS-like 4 OS=Cucurbita maxima OX=3661 GN=LOC111496369 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 4.2e-32 Identity = 76/89 (85.39%), Postives = 79/89 (88.76%), Query Frame = 0
BLAST of Spg033710 vs. ExPASy TrEMBL
Match: A0A1S3BBR2 (protein RADIALIS-like 4 OS=Cucumis melo OX=3656 GN=LOC103487968 PE=4 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 7.2e-32 Identity = 73/87 (83.91%), Postives = 80/87 (91.95%), Query Frame = 0
BLAST of Spg033710 vs. ExPASy TrEMBL
Match: A0A6J1K580 (protein RADIALIS-like 4 OS=Cucurbita maxima OX=3661 GN=LOC111492400 PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 1.8e-30 Identity = 72/90 (80.00%), Postives = 78/90 (86.67%), Query Frame = 0
BLAST of Spg033710 vs. ExPASy TrEMBL
Match: A0A6J1CRB5 (protein RADIALIS-like 3 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014035 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 1.1e-29 Identity = 71/93 (76.34%), Postives = 83/93 (89.25%), Query Frame = 0
BLAST of Spg033710 vs. TAIR 10
Match: AT1G75250.1 (RAD-like 6 ) HSP 1 Score: 112.8 bits (281), Expect = 2.9e-25 Identity = 52/75 (69.33%), Postives = 62/75 (82.67%), Query Frame = 0
BLAST of Spg033710 vs. TAIR 10
Match: AT1G75250.2 (RAD-like 6 ) HSP 1 Score: 112.8 bits (281), Expect = 2.9e-25 Identity = 52/75 (69.33%), Postives = 62/75 (82.67%), Query Frame = 0
BLAST of Spg033710 vs. TAIR 10
Match: AT1G19510.1 (RAD-like 5 ) HSP 1 Score: 108.2 bits (269), Expect = 7.1e-24 Identity = 51/72 (70.83%), Postives = 61/72 (84.72%), Query Frame = 0
BLAST of Spg033710 vs. TAIR 10
Match: AT4G39250.1 (RAD-like 1 ) HSP 1 Score: 105.1 bits (261), Expect = 6.0e-23 Identity = 47/72 (65.28%), Postives = 58/72 (80.56%), Query Frame = 0
BLAST of Spg033710 vs. TAIR 10
Match: AT2G18328.1 (RAD-like 4 ) HSP 1 Score: 104.0 bits (258), Expect = 1.3e-22 Identity = 48/75 (64.00%), Postives = 63/75 (84.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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