Spg033638 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg033638
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold13: 38869519 .. 38869986 (-)
RNA-Seq Expression	Spg033638
Synteny	Spg033638

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAAGTTCCTCTGAGCTTCGATTACCCTACCGACATTCTCTTAGTCGGCCAATCGGTTCGAATCGGCGGCCGGAACAAATTAATCAGCCGCACGTCCGAAATCGACGGCTCCGATGGCCCTTACAGCCTCGTACTGGATCGAACCGGTCTCACGATGTTCCTCAATCACTCCGGTCAGCTCTTAACCTACGGCGGCTGGCTGGGGACGAACCACAAAAACAGAGTGACGTTCGACGAGGAGCCGGAGAACGAAAACGCGAAGGAGTACGAGCTAGTTCTGTTTGTGAACTAGGATGGGGATGTGCTACGGGTACTGCAGCAGGGAAGTGTGCGTGGCGTGTCCGAGCCCGAAGAGGCTTCTGGGGTGGGGCGAGAGCTGTGCGCCGCCGAAGACGCCGCCGTGCAGCGGTGGAGGAAAGGGGAAATTTGGGTATTGTAAGATCGTTGGAGTGGAGCATTTTCTGA

mRNA sequence

ATGACAAGTTCCTCTGAGCTTCGATTACCCTACCGACATTCTCTTAGTCGGCCAATCGGTTCGAATCGGCGGCCGGAACAAATTAATCAGCCGCACGTCCGAAATCGACGGCTCCGATGGCCCTTACAGCCTCGTACTGGATCGAACCGGTCTCACGATGTTCCTCAATCACTCCGGTCAGCTCTTAACCTACGGCGGCTGGCTGGGGACGAACCACAAAAACAGAGTGACGTTCGACGAGGAGCCGGAGAACGAAAACGCGAAGGAGTACGAGCTAGTTCTGTTTGTGAACTAGGATGGGGATGTGCTACGGGTACTGCAGCAGGGAAGTGTGCGTGGCGTGTCCGAGCCCGAAGAGGCTTCTGGGGTGGGGCGAGAGCTGTGCGCCGCCGAAGACGCCGCCGTGCAGCGGTGGAGGAAAGGGGAAATTTGGGTATTGTAAGATCGTTGGAGTGGAGCATTTTCTGA

Coding sequence (CDS)

ATGACAAGTTCCTCTGAGCTTCGATTACCCTACCGACATTCTCTTAGTCGGCCAATCGGTTCGAATCGGCGGCCGGAACAAATTAATCAGCCGCACGTCCGAAATCGACGGCTCCGATGGCCCTTACAGCCTCGTACTGGATCGAACCGGTCTCACGATGTTCCTCAATCACTCCGGTCAGCTCTTAACCTACGGCGGCTGGCTGGGGACGAACCACAAAAACAGAGTGACGTTCGACGAGGAGCCGGAGAACGAAAACGCGAAGGAGTACGAGCTAGTTCTGTTTGTGAACTAGGATGGGGATGTGCTACGGGTACTGCAGCAGGGAAGTGTGCGTGGCGTGTCCGAGCCCGAAGAGGCTTCTGGGGTGGGGCGAGAGCTGTGCGCCGCCGAAGACGCCGCCGTGCAGCGGTGGAGGAAAGGGGAAATTTGGGTATTGTAAGATCGTTGGAGTGGAGCATTTTCTGA

Protein sequence

MTSSSELRLPYRHSLSRPIGSNRRPEQINQPHVRNRRLRWPLQPRTGSNRSHDVPQSLRSALNLRRLAGDEPQKQSDVRRGAGERKREGVRASSVCELGWGCATGTAAGKCAWRVRARRGFWGGARAVRRRRRRRAAVEERGNLGIVRSLEWSIF

Homology

The following BLAST results are available for this feature:

BLAST of Spg033638 vs.


Match Name	E-value	Identity	Description

BLAST of Spg033638 vs.


Match Name	E-value	Identity	Description

BLAST of Spg033638 vs.


Match Name	E-value	Identity	Description

BLAST of Spg033638 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg033638.1	Spg033638.1	mRNA