Spg033556 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGGCTTTGAGATAAATGGGCCGGCCCAATAGGAAATGTTGGGAAATATCTCAAAACGACACAATCAGCGATTTGTCAAAGGAAGAAACGTGTAGGATTGTGATTGGACCTCGCAACTATATCTACGCGACCGATTCGTTTCCATTGACCCATAAGGATTAGTTCCGTAAGATCCCAATTCCGCCACCATTTTCGACCTCATCCTCCCAAAATTATCCCATCCACCTCCGCCTCCGCCGCCGTTGACGCTGCAGCTCTGCCGATCTTTTTCATCGTGTCACGGATCAGATGATTTCCGCTTTATCCTTTGACTGAACGATCTCAGGTTCTCATGTTCTGAACCTTTGTTTTTTTTCGTTTCGCACATTACGATTTGTCCTTTGCTCCGTTTTTCTACCGTTCCTGGCTCGCAAATCTGAGGTTTTGTTAGACCCGACGCAAATTAGGGTTTCGAAGAGCATTGCAGTATGCCTTCGGTACCTATTGATCTCTTCCTTCGCCCTCTCCTTCCTTCTTTGACTTCTTTTCATGGTGGTTCTTCGTCGCATCGTCTGAAGCGGCTTGAAAAGGGTGATCGGCGTGGTAACCTTAGTTAACATGGGGATCTTTTAGCGCATTTCGTGCTCTAGTCGTGTTTTCCAGTCTTCTCTTTCCTCCTCCTTGCTCTTTGGTCCGTTCGAGGTTTGGAATTCCTAGAGTAATTAGAGTTGTAAGGTAAGGGTTTCTTGTTTTGAGCTTGATCTTGATCTTGAGGTGTTTTGGCGGTCGAAGCCTCTGAAAGCGAGTTACTGGCAATTGACTACTCGTTGAGAGGGTTTTTGCAATCCTGATTATTGTGCAAGGTATTGTGCTCAAATCTTTTTGTATTCTTAAGATTTTTTTTCTTCCATTTGCCTTGGAAACGCCATAGCAGCCTCATCCTTCTTGCTGAGCTCCTGGATCGAGTTTCTTCCTGTTTGATTTACGTTATCTTGGTTATTTGTGCAGGTTCTAGCAGTTTTATTGTGCTATATATAAGCCTGAATGGACATTCCTTCCTTTCATCAGAAGTTGGCTTTCCAAGATGTAGATGGTTTGGATGATCTGCAATCGTCTTTGAGAGAAATTGATGCTGCATTGTTTAATGATCTTGACAGATCTTTTCAGCAGTCTTTGAGCTTTGAAGATACTAAAAGTTCAGAGTGCAAACGTAATTTGAATTGCGATGATAATTCAAATGATAGAAACAAACAAAAAGAGCTTGAACCTCCCGAGAAGAACTCATCTAAGAAGTGTTTAAGCAAATCCAAGTCCTTTCCCCTTCCTGCTGTAACATCCATCCCTAACGATTCTTCAGAAAATGATAAGAAACCACAAACAGCGACGGGTGATGCGTCCTCTAATGAATCTGTGCATCAAGCCTTTGCAAGATCAATATCTTTACCAGTAAGTTTTCTTGTCGGCAAGACTAAACTGGATTTTGCAGTTGCGTCAGTATATGATTTCTTGTATTCAATTTTGTAGCTTTGCTATTATTATTGCTCTGTCGATTATTCCTTATTGTTATTATAAACTACTATGAATATAATCATAATTATCATGGTTATCTGTTATCGATTATACATGACTGTGTTTTCCTATTTTATTAAACCATCTGAGCATAACCCTCCAAGTAGGGGGTGGGGAAAAAGTTCTGGAAATTAAAATTGTTCTAAGCAACATGGTCCTAGAGATTATGTAGTACCCGATGGATTTTTGTATGTTTTTTCTTTTTAGTATGTCATGTCTTTGTGTTTGTGTGGAGGCAAACTTGCTGCGGTAGCTGTATATATGTAGTTAATTTGTTTCGTGAGTTTCTCATTTTCATTTCATGAAATGGAGAATTTTCTGTGTATATGTTGATCGTTGTTAGCAGCATAACCCAAAGATGATTGTCTATTTACACCACAATTTTTGTTTACCACACCCTGAGTGCAGATTTGAGTTTGTTACTTGCAAAGCAGCTCTTGTACTATGAGTTTGCTTGTGGTTATAGATAATGAATATCAGTGAATGTTAGTGAAGCCATTGCATTTGGCATTTTGGTCTCACCCCTTCTGTTTTCAATCATGACCCTTATCTTCTGTTTGCTGGTATAACTCCTAATGTTCAGGCTCCTGCAAAGCTCGTATCTGCGATGAAAGGTAGCCGAGCACAACACTATGGGGAGTCTCCTAGGCTGACTGTGAAATGGGCTCCCGACGTGTACGATCCACCCCAGACATCTTTGTCCCATAGTGTCAAAAACAACAAGAAACAGCAGAAATCTAAGAACAGGAAGAATGGGAAGAAAGGACAGAAGGGCAGCAACTCTTCGCGCGGGAGTGGTGGTGGCAGGGACAAAAGGCAGGCTCGTAAAGCCGTTGGCAGTTCTGATCGGTATCAAAGATCATTTGACTCTCATGAAAGTTTGGTTAATACTCTCAATGAGTTTGAGAGTTTCGATGACGGGAGCTCAGACTCTCACTGTGGAAGCATCTTTCTGAAAACATCGGTCACCAAGGTGCACTACTCTGTTACTGAAGCCTTGTGAGCGTTACTTGTCCAAGTTTTCATCTTCTCTCACAGTTTCTGTAAATAAATAAAATGTTGTTTTGGTTTTCCTTTTTGTGATTGTGGATGACTGAGAGGCTTGGACCAAAAAATTGTTTGACGTTAACTGGTTTGTTGCTTTTTTATGATATTGTTGAAACTTCGCTTTTTATCAGACTGAAGAATGATGATATATTACTATGATTTTTGGATATGGTTTGTGACTGTTATTTGGGTACTTGCTTTTTTTTGTATGCTCTATTGTGAATAGTTGTGGAAGTTTGATTTTTTCTCTTTGGTTAATCTTGTTATAAAACATAGGAGATTTGGTTAT ATGGACATTCCTTCCTTTCATCAGAAGTTGGCTTTCCAAGATGTAGATGGTTTGGATGATCTGCAATCGTCTTTGAGAGAAATTGATGCTGCATTGTTTAATGATCTTGACAGATCTTTTCAGCAGTCTTTGAGCTTTGAAGATACTAAAAGTTCAGAGTGCAAACGTAATTTGAATTGCGATGATAATTCAAATGATAGAAACAAACAAAAAGAGCTTGAACCTCCCGAGAAGAACTCATCTAAGAAGTGTTTAAGCAAATCCAAGTCCTTTCCCCTTCCTGCTGTAACATCCATCCCTAACGATTCTTCAGAAAATGATAAGAAACCACAAACAGCGACGGGTGATGCGTCCTCTAATGAATCTGTGCATCAAGCCTTTGCAAGATCAATATCTTTACCAGCTCCTGCAAAGCTCGTATCTGCGATGAAAGGTAGCCGAGCACAACACTATGGGGAGTCTCCTAGGCTGACTGTGAAATGGGCTCCCGACGTGTACGATCCACCCCAGACATCTTTGTCCCATAGTGTCAAAAACAACAAGAAACAGCAGAAATCTAAGAACAGGAAGAATGGGAAGAAAGGACAGAAGGGCAGCAACTCTTCGCGCGGGAGTGGTGGTGGCAGGGACAAAAGGCAGGCTCGTAAAGCCGTTGGCAGTTCTGATCGGTATCAAAGATCATTTGACTCTCATGAAAGTTTGGTTAATACTCTCAATGAGTTTGAGAGTTTCGATGACGGGAGCTCAGACTCTCACTGTGGAAGCATCTTTCTGAAAACATCGGTCACCAAGGTGCACTACTCTGTTACTGAAGCCTTGTGA ATGGACATTCCTTCCTTTCATCAGAAGTTGGCTTTCCAAGATGTAGATGGTTTGGATGATCTGCAATCGTCTTTGAGAGAAATTGATGCTGCATTGTTTAATGATCTTGACAGATCTTTTCAGCAGTCTTTGAGCTTTGAAGATACTAAAAGTTCAGAGTGCAAACGTAATTTGAATTGCGATGATAATTCAAATGATAGAAACAAACAAAAAGAGCTTGAACCTCCCGAGAAGAACTCATCTAAGAAGTGTTTAAGCAAATCCAAGTCCTTTCCCCTTCCTGCTGTAACATCCATCCCTAACGATTCTTCAGAAAATGATAAGAAACCACAAACAGCGACGGGTGATGCGTCCTCTAATGAATCTGTGCATCAAGCCTTTGCAAGATCAATATCTTTACCAGCTCCTGCAAAGCTCGTATCTGCGATGAAAGGTAGCCGAGCACAACACTATGGGGAGTCTCCTAGGCTGACTGTGAAATGGGCTCCCGACGTGTACGATCCACCCCAGACATCTTTGTCCCATAGTGTCAAAAACAACAAGAAACAGCAGAAATCTAAGAACAGGAAGAATGGGAAGAAAGGACAGAAGGGCAGCAACTCTTCGCGCGGGAGTGGTGGTGGCAGGGACAAAAGGCAGGCTCGTAAAGCCGTTGGCAGTTCTGATCGGTATCAAAGATCATTTGACTCTCATGAAAGTTTGGTTAATACTCTCAATGAGTTTGAGAGTTTCGATGACGGGAGCTCAGACTCTCACTGTGGAAGCATCTTTCTGAAAACATCGGTCACCAAGGTGCACTACTCTGTTACTGAAGCCTTGTGA MDIPSFHQKLAFQDVDGLDDLQSSLREIDAALFNDLDRSFQQSLSFEDTKSSECKRNLNCDDNSNDRNKQKELEPPEKNSSKKCLSKSKSFPLPAVTSIPNDSSENDKKPQTATGDASSNESVHQAFARSISLPAPAKLVSAMKGSRAQHYGESPRLTVKWAPDVYDPPQTSLSHSVKNNKKQQKSKNRKNGKKGQKGSNSSRGSGGGRDKRQARKAVGSSDRYQRSFDSHESLVNTLNEFESFDDGSSDSHCGSIFLKTSVTKVHYSVTEAL Homology
BLAST of Spg033556 vs. NCBI nr
Match: XP_008442574.1 (PREDICTED: uncharacterized protein LOC103486407 [Cucumis melo]) HSP 1 Score: 419.1 bits (1076), Expect = 3.0e-113 Identity = 234/274 (85.40%), Postives = 248/274 (90.51%), Query Frame = 0
BLAST of Spg033556 vs. NCBI nr
Match: XP_022982544.1 (uncharacterized protein LOC111481389 [Cucurbita maxima]) HSP 1 Score: 415.6 bits (1067), Expect = 3.3e-112 Identity = 225/275 (81.82%), Postives = 247/275 (89.82%), Query Frame = 0
BLAST of Spg033556 vs. NCBI nr
Match: XP_022934672.1 (uncharacterized protein LOC111441794 [Cucurbita moschata] >XP_022934673.1 uncharacterized protein LOC111441794 [Cucurbita moschata]) HSP 1 Score: 407.9 bits (1047), Expect = 6.8e-110 Identity = 224/275 (81.45%), Postives = 247/275 (89.82%), Query Frame = 0
BLAST of Spg033556 vs. NCBI nr
Match: KAG7017316.1 (hypothetical protein SDJN02_19179, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 405.6 bits (1041), Expect = 3.4e-109 Identity = 223/275 (81.09%), Postives = 246/275 (89.45%), Query Frame = 0
BLAST of Spg033556 vs. NCBI nr
Match: XP_023527066.1 (uncharacterized protein LOC111790413 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 404.8 bits (1039), Expect = 5.8e-109 Identity = 225/280 (80.36%), Postives = 246/280 (87.86%), Query Frame = 0
BLAST of Spg033556 vs. ExPASy TrEMBL
Match: A0A1S3B607 (uncharacterized protein LOC103486407 OS=Cucumis melo OX=3656 GN=LOC103486407 PE=4 SV=1) HSP 1 Score: 419.1 bits (1076), Expect = 1.4e-113 Identity = 234/274 (85.40%), Postives = 248/274 (90.51%), Query Frame = 0
BLAST of Spg033556 vs. ExPASy TrEMBL
Match: A0A6J1J4W0 (uncharacterized protein LOC111481389 OS=Cucurbita maxima OX=3661 GN=LOC111481389 PE=4 SV=1) HSP 1 Score: 415.6 bits (1067), Expect = 1.6e-112 Identity = 225/275 (81.82%), Postives = 247/275 (89.82%), Query Frame = 0
BLAST of Spg033556 vs. ExPASy TrEMBL
Match: A0A6J1F8B3 (uncharacterized protein LOC111441794 OS=Cucurbita moschata OX=3662 GN=LOC111441794 PE=4 SV=1) HSP 1 Score: 407.9 bits (1047), Expect = 3.3e-110 Identity = 224/275 (81.45%), Postives = 247/275 (89.82%), Query Frame = 0
BLAST of Spg033556 vs. ExPASy TrEMBL
Match: A0A6J1CWP6 (uncharacterized protein LOC111014992 OS=Momordica charantia OX=3673 GN=LOC111014992 PE=4 SV=1) HSP 1 Score: 404.8 bits (1039), Expect = 2.8e-109 Identity = 220/273 (80.59%), Postives = 240/273 (87.91%), Query Frame = 0
BLAST of Spg033556 vs. ExPASy TrEMBL
Match: A0A5D3DN94 (BRI1-KD interacting protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001860 PE=4 SV=1) HSP 1 Score: 402.5 bits (1033), Expect = 1.4e-108 Identity = 223/259 (86.10%), Postives = 237/259 (91.51%), Query Frame = 0
BLAST of Spg033556 vs. TAIR 10
Match: AT3G53670.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37480.1); Has 176 Blast hits to 173 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 13; Plants - 154; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). ) HSP 1 Score: 61.2 bits (147), Expect = 1.5e-09 Identity = 52/145 (35.86%), Postives = 85/145 (58.62%), Query Frame = 0
BLAST of Spg033556 vs. TAIR 10
Match: AT3G53670.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37480.1). ) HSP 1 Score: 61.2 bits (147), Expect = 1.5e-09 Identity = 52/145 (35.86%), Postives = 85/145 (58.62%), Query Frame = 0
BLAST of Spg033556 vs. TAIR 10
Match: AT2G37480.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53670.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 53.5 bits (127), Expect = 3.0e-07 Identity = 48/135 (35.56%), Postives = 67/135 (49.63%), Query Frame = 0
BLAST of Spg033556 vs. TAIR 10
Match: AT2G37480.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53670.2); Has 186 Blast hits to 186 proteins in 35 species: Archae - 0; Bacteria - 2; Metazoa - 14; Fungi - 7; Plants - 154; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). ) HSP 1 Score: 53.1 bits (126), Expect = 4.0e-07 Identity = 48/136 (35.29%), Postives = 67/136 (49.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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