Spg033397 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg033397
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Nuclear transcription factor Y subunit B
Location	scaffold5: 2441316 .. 2444746 (+)
RNA-Seq Expression	Spg033397
Synteny	Spg033397

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGATGCTCCGACGAGCCCCGGCGGAGGAAGCCATGAGAGCGGCGAGCAGAGTCCGCGGTCTAATGTTCGGGAACAGGATAGGTTCCTTCCGATTGCGAATATTAGCAGGATCATGAAGAAGGCTCTTCCGGCTAATGGGAAGATTGCCAAGGATGCTAAGGAGACCGTACAGGAATGTGTATCGGAGTTCATCAGTTTTATTACCAGCGAGTACGGGAGTGATTTTGATAATCAATTGTTCTTCGTTTTTGGTTGGAGTTGTTTGATTGGTTATATTTGCCTTCTTCTTGTTCTGAATTTGGGGGATTTCTTTTTGTCGTTGAATTGTATCTAGGGCTAGTGATAAATGCCAAAGAGAAAAACGGAAGACGATTAATGGAGATGATTTGCTTTGGGCTATGGCTACTCTTGGATTTGAGGATTATATCGATCCGCTTAAAACCTACTTGACGAAATACAGAGAGGTACTCAGTCGGCTAATGCTCGTGCATTGTCGGCTATTCTATCACTATATGTTCTGTTGCTTTGATGAAGAACTGTTGAAGATAGAATTAACAGTCCTTGCGTGATTCGTTTGAATGCTTCTAACAGGGAGCTTTGAATCTAGTCTAAACTTTTTTTTTTTGGGTTTGTTAATTTGACTGCTGTTCGTTGTGCTCTTGAACTGATGGATGGCTGCTTTCTTTTTTGCTTTTTTTGCCTGCTGGTTGGGACTTGGGACGTTTTAGACTGAGGTAAGATAGAGTTTTTTCCTTTACGTCTCTGTGATTTGTCAACATCATATATGAAATTAGGAGGTTTCTATATATTGTTTGTGTTCTCTGACAGGGCGACACTAAGGGGTCTGCCAAAGGTGGGGATGCGTCAGCTAAGAAAGAAGCTCATCCAACCTCTGGTGCTCAGGTCAATTATAAGAGCTTGATTTTTTCTCATTGAGCTGGATTTTTGGTGTTTTCTTCTAAGCTTGTTTCTTTCTAAACTCTATAGATTGCTCATCAAGGGTCGTTTTCCCAAGGAGTTAATTATGCAAGTTCTCAAGTACTCTCTCTCTCTATCTCTCTCTCTCTCACATACTCACACACGCATAAAAACAAGCATACACTTTCACAATGTCCTTTGAAGAAGCAAAGAGCAGTTCTGCTAGTGTACTTAGGGTGACTTTGGCATGACATTTGGATAGGGAAGTTCTTTTTTAAGCTAATTTGATGCTTTTGTCTAAAAAATTATTTTTATTTATTTATAAGAAATCACTCTTTCATCGAGAAAAATCAAAGAACATACAAGAACAAGCCTGAACAAGGATCTGACCCTAGCGACAAAAGAGGACTCCAATCTAAAACAACGAGATGAAGCTCATAATTATACAAAGGTCTAGTGACTAACGCCCACCATGAGGCATTAAACCTAGAAACCTTCCCAGCCTCCTTATTCAATCTCTTGAAATTTTTATGGTGTTTGGTTATATAATTAAAAATTATTTTAAAAATTATAAAATTTCTTAAATAATGTTTTTAGAGGGAGCTGTTTCAAGAGTGCTTGTCTATGTAAATTAAAAGTCATTTAGCAGTTGAGTTACCTGTTTGTAAATCATGTTTACTCTTATGTCATGTAGTGATACAAATGCCCTTGGCAGTCTCCCCATCAGTTGTTCATCTAATTGTAAAAGGATGTGCTTGGAACTTGATTTGTTTGTAAATTGGAGCCAGAGGACTCAGTGAGCATTTGCTAGAGTTCAGACTGTAGCATCAAAATAGTTAGTGTGTAGAGAAAAAGCATGTCAAGAACTATTCTTTCCCTTTTTATAGTGTGGCTCTGCTTTCTATTCTTTCATTTTTTCTCAATGAAAGCTCGGTTTATTATTAAAAAAAAAGTCAAGAACTATTTTTGGGGACTTGGAGTTACAAGTTGAATTTCATTTGATATTTGTTTTCTTTGGACAATGTTTGGTATTTACATTGCAACACACCACACACCCTTCTATATTGGATCTACTAGGCCTGCGGACTTTTGCTTTTCTTTGAGAATCACATTTTGCCCCTTCATGGAGTGGTTTAGATTGTTTTTCTTTTTTTCTCTTTCTTTTAATAACTTCTTTGTTTTAGAAATTTAGTTTTGTTTCTAGTTCATACTTCATATCTTCATGATTCTTAAAGTTCTTTCCTCAGGCAAAGCATCTGTTTCTTATTATTACTTGGGGTTTATTTTAGAGCTCTCATACGTAAATCTTGGTTGAAAAATTAGTAAATAACTTTGAATATCTCTAGGAGATGACGTGTATCAGTAAAAGGTTATTTCCTTTTTAGCCTTGGTGAAAGGGCAATATATTGGTATTTGCATCTTTTTAAGTACCTAGAAAATGAGTATGTAACTTTTTTTAGCTTCTTTATATTGGGATGCCCCTTTTGAGTATAATGGTCAAAAGTGCAAGTGGTAAATCTAGATCTTCTAATCATGCTACCCACCTAAAATATTAAACCTTCAATGAGTTTTGTAATGCAAATGAAAATATTATAGTGTCAAATGAACCATCATGACCACTAGGGCCTTAGAAAAAATAAAGGGCTTAGAGGGAATGGGTTCAATCCGTATGTCGAACTACCTAGGATTTAATATTCTACAAGTTTCCTTGGCAACCAAATGTAGTAGGGTCAGACGGTTGTCATGTGAGATTAGTCGAGGTGTGCGTAAGCTGGCCCTGACACTCACGGATATAAAAAAAAAAGTGTCAAATGGTTGCCTATAAAATTGGTGTGTGACATATAAATGGATAGTTACAAGTACGAATATAACATCGTATAAATTTTGTTTTTATGTCACAATAGTTTCAAGTTGTGTAACACTCCCAAAGCAAAATTTACTTCTTTCTCTCTCTTAGGTTTAATACCATCTTTCCATTTTTGCAGTCACAAGCCCAGCATCTGATGGTTCCTATGCAAGGCACCGACTAAAATTTCCTCGAATTCGACCATTTAAACTGTTGAATATGAAGATCTTTGTTCAGCATAACAGCAAAAATTTGAGTCTATTTATTTGAAGTTTGGGTGGTTTTGATACTTCTATTGTAGAAACAGTTGAAACTTTGTATATTATTATGGCTCTGTTTATTGGATTGGAGTAGGACACAGTATTTAATAGAGGTTCCAAGTCCTGGGGTTCCCATTTATTTGTGACTTGTAAACCTCACAACAGCCTTGGCAAGGACTTGAAGATCTTGAAAGGACTGAGTAGCAGCAGCACCCTTTACATTTTCTTTTTTCTTTTTCCTTTTTTTTAGGTCATTTTCCTAATCAAAACAATAAATTGTGTCAGGAATGATTTGCTTCTAGAAGTTCTTTAATCTTTCTTTGCTGTAGATGAAATGAATGGTATTTGGACTGTAAACTCCTTTATTCTTGTGTTGATCTTTAATTTCTGACATGTTTTGTG

mRNA sequence

ATGGCCGATGCTCCGACGAGCCCCGGCGGAGGAAGCCATGAGAGCGGCGAGCAGAGTCCGCGGTCTAATGTTCGGGAACAGGATAGGTTCCTTCCGATTGCGAATATTAGCAGGATCATGAAGAAGGCTCTTCCGGCTAATGGGAAGATTGCCAAGGATGCTAAGGAGACCGTACAGGAATGTGTATCGGAGTTCATCAGTTTTATTACCAGCGAGTACGGGAGTGATTTTGATAATCAATTGGCTAGTGATAAATGCCAAAGAGAAAAACGGAAGACGATTAATGGAGATGATTTGCTTTGGGCTATGGCTACTCTTGGATTTGAGGATTATATCGATCCGCTTAAAACCTACTTGACGAAATACAGAGAGGTACTCAGTCGGCTAATGCTCGTGCATTGTCGGCTATTCTATCACTATATGTTCTGTTGCTTTGATGAAGAACTGTTGAAGATAGAATTAACAGGCGACACTAAGGGGTCTGCCAAAGGTGGGGATGCGTCAGCTAAGAAAGAAGCTCATCCAACCTCTGGTGCTCAGTCACAAGCCCAGCATCTGATGGTTCCTATGCAAGGCACCGACTAA

Coding sequence (CDS)

ATGGCCGATGCTCCGACGAGCCCCGGCGGAGGAAGCCATGAGAGCGGCGAGCAGAGTCCGCGGTCTAATGTTCGGGAACAGGATAGGTTCCTTCCGATTGCGAATATTAGCAGGATCATGAAGAAGGCTCTTCCGGCTAATGGGAAGATTGCCAAGGATGCTAAGGAGACCGTACAGGAATGTGTATCGGAGTTCATCAGTTTTATTACCAGCGAGTACGGGAGTGATTTTGATAATCAATTGGCTAGTGATAAATGCCAAAGAGAAAAACGGAAGACGATTAATGGAGATGATTTGCTTTGGGCTATGGCTACTCTTGGATTTGAGGATTATATCGATCCGCTTAAAACCTACTTGACGAAATACAGAGAGGTACTCAGTCGGCTAATGCTCGTGCATTGTCGGCTATTCTATCACTATATGTTCTGTTGCTTTGATGAAGAACTGTTGAAGATAGAATTAACAGGCGACACTAAGGGGTCTGCCAAAGGTGGGGATGCGTCAGCTAAGAAAGAAGCTCATCCAACCTCTGGTGCTCAGTCACAAGCCCAGCATCTGATGGTTCCTATGCAAGGCACCGACTAA

Protein sequence

MADAPTSPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEYGSDFDNQLASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYREVLSRLMLVHCRLFYHYMFCCFDEELLKIELTGDTKGSAKGGDASAKKEAHPTSGAQSQAQHLMVPMQGTD

Homology

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BLAST of Spg033397 vs. NCBI nr
Match: XP_022948121.1 (nuclear transcription factor Y subunit B-1-like [Cucurbita moschata] >XP_022948130.1 nuclear transcription factor Y subunit B-1-like [Cucurbita moschata] >XP_023005187.1 nuclear transcription factor Y subunit B-1-like [Cucurbita maxima] >XP_023005188.1 nuclear transcription factor Y subunit B-1-like [Cucurbita maxima] >XP_023540646.1 nuclear transcription factor Y subunit B-1-like [Cucurbita pepo subsp. pepo] >XP_023540647.1 nuclear transcription factor Y subunit B-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 265.8 bits (678), Expect = 3.0e-67
Identity = 151/211 (71.56%), Postives = 151/211 (71.56%), Query Frame = 0


Query: 1   MADAPTSPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60
           MADAP SPGGGSHESGE SPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE
Sbjct: 1   MADAPASPGGGSHESGEHSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60

Query: 61  CVSEFISFITSEYGSDFDNQLASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLT 120
           CVSEFISFITSE         ASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLT
Sbjct: 61  CVSEFISFITSE---------ASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLT 120

Query: 121 KYREVLSRLMLVHCRLFYHYMFCCFDEELLKIELTGDTKGSAKGGDASAKKEAHPTSGA- 180
           KYRE                               GDTKGSAKGGDASAKKEAHPT GA 
Sbjct: 121 KYRET-----------------------------EGDTKGSAKGGDASAKKEAHPTPGAQ 173

Query: 181 ----------------QSQAQHLMVPMQGTD 195
                           QSQAQHLMVPMQGTD
Sbjct: 181 VAHQGTFSQGVNYGSSQSQAQHLMVPMQGTD 173

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BLAST of Spg033397 vs. NCBI nr
Match: KAG6596449.1 (putative LRR receptor-like serine/threonine-protein kinase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 265.4 bits (677), Expect = 3.9e-67
Identity = 151/211 (71.56%), Postives = 151/211 (71.56%), Query Frame = 0


Query: 1    MADAPTSPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60
            MADAP SPGGGSHESGE SPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE
Sbjct: 920  MADAPASPGGGSHESGEHSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 979

Query: 61   CVSEFISFITSEYGSDFDNQLASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLT 120
            CVSEFISFITSE         ASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLT
Sbjct: 980  CVSEFISFITSE---------ASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLT 1039

Query: 121  KYREVLSRLMLVHCRLFYHYMFCCFDEELLKIELTGDTKGSAKGGDASAKKEAHPTSGA- 180
            KYRE                               GDTKGSAKGGDASAKKEAHPT GA 
Sbjct: 1040 KYRE-------------------------------GDTKGSAKGGDASAKKEAHPTPGAQ 1090

Query: 181  ----------------QSQAQHLMVPMQGTD 195
                            QSQAQHLMVPMQGTD
Sbjct: 1100 VAHQGTFSQGVNYGSSQSQAQHLMVPMQGTD 1090

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BLAST of Spg033397 vs. NCBI nr
Match: XP_038906090.1 (nuclear transcription factor Y subunit B-10-like isoform X1 [Benincasa hispida])

HSP 1 Score: 264.6 bits (675), Expect = 6.6e-67
Identity = 150/211 (71.09%), Postives = 152/211 (72.04%), Query Frame = 0


Query: 1   MADAPTSPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60
           MADAP SPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE
Sbjct: 1   MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60

Query: 61  CVSEFISFITSEYGSDFDNQLASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLT 120
           CVSEFISFITSE         ASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLT
Sbjct: 61  CVSEFISFITSE---------ASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLT 120

Query: 121 KYREVLSRLMLVHCRLFYHYMFCCFDEELLKIELTGDTKGSAKGGDASAKKEAHPTS--- 180
           KYRE                               GDTKGSAKGGDASAKKEAHPTS   
Sbjct: 121 KYRET-----------------------------EGDTKGSAKGGDASAKKEAHPTSISQ 173

Query: 181 --------------GAQSQAQHLMVPMQGTD 195
                          +QSQAQHLMVPMQGT+
Sbjct: 181 IAHQGSFSQGVNYASSQSQAQHLMVPMQGTE 173

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BLAST of Spg033397 vs. NCBI nr
Match: XP_004137802.1 (nuclear transcription factor Y subunit B-1 isoform X1 [Cucumis sativus] >XP_008442637.1 PREDICTED: nuclear transcription factor Y subunit B-1 isoform X1 [Cucumis melo] >KGN58930.1 hypothetical protein Csa_002371 [Cucumis sativus])

HSP 1 Score: 263.5 bits (672), Expect = 1.5e-66
Identity = 149/211 (70.62%), Postives = 151/211 (71.56%), Query Frame = 0


Query: 1   MADAPTSPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60
           MADAP SPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE
Sbjct: 1   MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60

Query: 61  CVSEFISFITSEYGSDFDNQLASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLT 120
           CVSEFISFITSE         ASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLT
Sbjct: 61  CVSEFISFITSE---------ASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLT 120

Query: 121 KYREVLSRLMLVHCRLFYHYMFCCFDEELLKIELTGDTKGSAKGGDASAKKEAHPT---- 180
           KYRE                               GDTKGSAKGGD SAKKEAHPT    
Sbjct: 121 KYRET-----------------------------EGDTKGSAKGGDGSAKKEAHPTPIPQ 173

Query: 181 -------------SGAQSQAQHLMVPMQGTD 195
                        + +QSQAQHLMVPMQGTD
Sbjct: 181 MAHQGSFSQGVNYASSQSQAQHLMVPMQGTD 173

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BLAST of Spg033397 vs. NCBI nr
Match: NP_001295779.1 (nuclear transcription factor Y subunit B-1 [Cucumis sativus] >XP_008442638.1 PREDICTED: nuclear transcription factor Y subunit B-1 isoform X2 [Cucumis melo] >XP_011651935.1 nuclear transcription factor Y subunit B-1 isoform X2 [Cucumis sativus] >CDF47513.1 nuclear transcription factor Y subunit B-8-like [Cucumis sativus])

HSP 1 Score: 263.1 bits (671), Expect = 1.9e-66
Identity = 149/211 (70.62%), Postives = 151/211 (71.56%), Query Frame = 0


Query: 1   MADAPTSPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60
           MADAP SPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE
Sbjct: 1   MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60

Query: 61  CVSEFISFITSEYGSDFDNQLASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLT 120
           CVSEFISFITSE         ASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLT
Sbjct: 61  CVSEFISFITSE---------ASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLT 120

Query: 121 KYREVLSRLMLVHCRLFYHYMFCCFDEELLKIELTGDTKGSAKGGDASAKKEAHPT---- 180
           KYRE                               GDTKGSAKGGD SAKKEAHPT    
Sbjct: 121 KYRE-------------------------------GDTKGSAKGGDGSAKKEAHPTPIPQ 171

Query: 181 -------------SGAQSQAQHLMVPMQGTD 195
                        + +QSQAQHLMVPMQGTD
Sbjct: 181 MAHQGSFSQGVNYASSQSQAQHLMVPMQGTD 171

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BLAST of Spg033397 vs. ExPASy Swiss-Prot
Match: Q8VYK4 (Nuclear transcription factor Y subunit B-8 OS=Arabidopsis thaliana OX=3702 GN=NFYB8 PE=1 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 4.8e-52
Identity = 126/204 (61.76%), Postives = 137/204 (67.16%), Query Frame = 0


Query: 7   SPGG-GSHES-GEQSPRS-NVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVS 66
           SPGG GSHES G+QSPRS +VREQDRFLPIANISRIMK+ LPANGKIAKDAKE VQECVS
Sbjct: 8   SPGGCGSHESGGDQSPRSLHVREQDRFLPIANISRIMKRGLPANGKIAKDAKEIVQECVS 67

Query: 67  EFISFITSEYGSDFDNQLASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYR 126
           EFISF+TSE         ASDKCQREKRKTINGDDLLWAMATLGFEDY++PLK YL +YR
Sbjct: 68  EFISFVTSE---------ASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYR 127

Query: 127 EVLSRLMLVHCRLFYHYMFCCFDEELLKIELTGDTKGSAKGGDASAKKE----------- 186
                                        E+ GDTKGSAKGGD +AKK+           
Sbjct: 128 -----------------------------EMEGDTKGSAKGGDPNAKKDGQSSQNGQFSQ 173

Query: 187 -AHPTSGAQSQA-QHLMVPMQGTD 195
            AH      SQA QH+MVPM GTD
Sbjct: 188 LAHQGPYGNSQAQQHMMVPMPGTD 173

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BLAST of Spg033397 vs. ExPASy Swiss-Prot
Match: Q67XJ2 (Nuclear transcription factor Y subunit B-10 OS=Arabidopsis thaliana OX=3702 GN=NFYB10 PE=1 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 5.3e-51
Identity = 122/214 (57.01%), Postives = 139/214 (64.95%), Query Frame = 0


Query: 1   MADAPT-SPGGGSHES-GEQSPRS-NVREQDRFLPIANISRIMKKALPANGKIAKDAKET 60
           MA++ T   GGGSHES G+QSPRS NVREQDRFLPIANISRIMK+ LP NGKIAKDAKET
Sbjct: 1   MAESQTGGGGGGSHESGGDQSPRSLNVREQDRFLPIANISRIMKRGLPLNGKIAKDAKET 60

Query: 61  VQECVSEFISFITSEYGSDFDNQLASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKT 120
           +QECVSEFISF+TSE         ASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLK 
Sbjct: 61  MQECVSEFISFVTSE---------ASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKV 120

Query: 121 YLTKYREVLSRLMLVHCRLFYHYMFCCFDEELLKIELTGDTKGSAKGGDASAKKEAHPTS 180
           YL +YR                             E+ GDTKGS KGG++SAK++  P+ 
Sbjct: 121 YLMRYR-----------------------------EMEGDTKGSGKGGESSAKRDGQPSQ 176

Query: 181 GAQ-----------------SQAQHLMVPMQGTD 195
            +Q                 SQ  ++MV M GT+
Sbjct: 181 VSQFSQVPQQGSFSQGPYGNSQGSNMMVQMPGTE 176

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BLAST of Spg033397 vs. ExPASy Swiss-Prot
Match: P25209 (Nuclear transcription factor Y subunit B OS=Zea mays OX=4577 GN=NFY2 PE=2 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.1e-48
Identity = 119/190 (62.63%), Postives = 127/190 (66.84%), Query Frame = 0


Query: 1   MADAPTSP--GGGSHESGEQSPR-----SNVREQDRFLPIANISRIMKKALPANGKIAKD 60
           MA+AP SP  GGGSHESG  SPR      +VREQDRFLPIANISRIMKKA+PANGKIAKD
Sbjct: 1   MAEAPASPGGGGGSHESG--SPRGGGGGGSVREQDRFLPIANISRIMKKAIPANGKIAKD 60

Query: 61  AKETVQECVSEFISFITSEYGSDFDNQLASDKCQREKRKTINGDDLLWAMATLGFEDYID 120
           AKETVQECVSEFISFITSE         ASDKCQREKRKTINGDDLLWAMATLGFEDYI+
Sbjct: 61  AKETVQECVSEFISFITSE---------ASDKCQREKRKTINGDDLLWAMATLGFEDYIE 120

Query: 121 PLKTYLTKYREVLSRLMLVHCRLFYHYMFCCFDEELLKIELTGDTKGSAKGGDASAKKEA 180
           PLK YL KYR                             E+ GD+K +AK  D S KK+A
Sbjct: 121 PLKVYLQKYR-----------------------------EMEGDSKLTAKSSDGSIKKDA 150

Query: 181 HPTSGAQSQA 184
               GA S A
Sbjct: 181 LGHVGASSSA 150

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BLAST of Spg033397 vs. ExPASy Swiss-Prot
Match: Q60EQ4 (Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB3 PE=1 SV=2)

HSP 1 Score: 190.7 bits (483), Expect = 1.6e-47
Identity = 117/197 (59.39%), Postives = 125/197 (63.45%), Query Frame = 0


Query: 1   MADAPTSP--GGGSHESGEQSPR------------SNVREQDRFLPIANISRIMKKALPA 60
           MAD P SP  GGGSHESG  SPR              VREQDRFLPIANISRIMKKA+PA
Sbjct: 1   MADGPGSPGGGGGSHESG--SPRGGGGGGGGGGGGGGVREQDRFLPIANISRIMKKAIPA 60

Query: 61  NGKIAKDAKETVQECVSEFISFITSEYGSDFDNQLASDKCQREKRKTINGDDLLWAMATL 120
           NGKIAKDAKETVQECVSEFISFITSE         ASDKCQREKRKTINGDDLLWAMATL
Sbjct: 61  NGKIAKDAKETVQECVSEFISFITSE---------ASDKCQREKRKTINGDDLLWAMATL 120

Query: 121 GFEDYIDPLKTYLTKYREVLSRLMLVHCRLFYHYMFCCFDEELLKIELTGDTKGSAKGGD 180
           GFEDYI+PLK YL KYR                             E+ GD+K +AK GD
Sbjct: 121 GFEDYIEPLKVYLQKYR-----------------------------EMEGDSKLTAKAGD 157

Query: 181 ASAKKEAHPTSGAQSQA 184
            S KK+   + G  S +
Sbjct: 181 GSVKKDVLGSHGGSSSS 157

[Close]

BLAST of Spg033397 vs. ExPASy Swiss-Prot
Match: Q9SLG0 (Nuclear transcription factor Y subunit B-1 OS=Arabidopsis thaliana OX=3702 GN=NFYB1 PE=1 SV=2)

HSP 1 Score: 179.5 bits (454), Expect = 3.7e-44
Identity = 103/180 (57.22%), Postives = 114/180 (63.33%), Query Frame = 0


Query: 1   MADAPTSPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60
           MAD P+SP G   ESG      +VREQDR+LPIANISRIMKKALP NGKI KDAK+TVQE
Sbjct: 1   MADTPSSPAGDGGESG-----GSVREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQE 60

Query: 61  CVSEFISFITSEYGSDFDNQLASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLT 120
           CVSEFISFITSE         ASDKCQ+EKRKT+NGDDLLWAMATLGFEDY++PLK YL 
Sbjct: 61  CVSEFISFITSE---------ASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLA 120

Query: 121 KYREVLSRLMLVHCRLFYHYMFCCFDEELLKIELTGDTKGSAKGGDASAKKEAHPTSGAQ 180
           +YR                             EL GD KGS K GD S +      SG +
Sbjct: 121 RYR-----------------------------ELEGDNKGSGKSGDGSNRDAGGGVSGEE 137

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BLAST of Spg033397 vs. ExPASy TrEMBL
Match: A0A6J1KSG0 (nuclear transcription factor Y subunit B-1-like OS=Cucurbita maxima OX=3661 GN=LOC111498291 PE=3 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.4e-67
Identity = 151/211 (71.56%), Postives = 151/211 (71.56%), Query Frame = 0


Query: 1   MADAPTSPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60
           MADAP SPGGGSHESGE SPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE
Sbjct: 1   MADAPASPGGGSHESGEHSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60

Query: 61  CVSEFISFITSEYGSDFDNQLASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLT 120
           CVSEFISFITSE         ASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLT
Sbjct: 61  CVSEFISFITSE---------ASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLT 120

Query: 121 KYREVLSRLMLVHCRLFYHYMFCCFDEELLKIELTGDTKGSAKGGDASAKKEAHPTSGA- 180
           KYRE                               GDTKGSAKGGDASAKKEAHPT GA 
Sbjct: 121 KYRET-----------------------------EGDTKGSAKGGDASAKKEAHPTPGAQ 173

Query: 181 ----------------QSQAQHLMVPMQGTD 195
                           QSQAQHLMVPMQGTD
Sbjct: 181 VAHQGTFSQGVNYGSSQSQAQHLMVPMQGTD 173

[Close]

BLAST of Spg033397 vs. ExPASy TrEMBL
Match: A0A6J1G8V7 (nuclear transcription factor Y subunit B-1-like OS=Cucurbita moschata OX=3662 GN=LOC111451794 PE=3 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.4e-67
Identity = 151/211 (71.56%), Postives = 151/211 (71.56%), Query Frame = 0


Query: 1   MADAPTSPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60
           MADAP SPGGGSHESGE SPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE
Sbjct: 1   MADAPASPGGGSHESGEHSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60

Query: 61  CVSEFISFITSEYGSDFDNQLASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLT 120
           CVSEFISFITSE         ASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLT
Sbjct: 61  CVSEFISFITSE---------ASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLT 120

Query: 121 KYREVLSRLMLVHCRLFYHYMFCCFDEELLKIELTGDTKGSAKGGDASAKKEAHPTSGA- 180
           KYRE                               GDTKGSAKGGDASAKKEAHPT GA 
Sbjct: 121 KYRET-----------------------------EGDTKGSAKGGDASAKKEAHPTPGAQ 173

Query: 181 ----------------QSQAQHLMVPMQGTD 195
                           QSQAQHLMVPMQGTD
Sbjct: 181 VAHQGTFSQGVNYGSSQSQAQHLMVPMQGTD 173

[Close]

BLAST of Spg033397 vs. ExPASy TrEMBL
Match: A0A0A0LAB9 (CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G736780 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 7.2e-67
Identity = 149/211 (70.62%), Postives = 151/211 (71.56%), Query Frame = 0


Query: 1   MADAPTSPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60
           MADAP SPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE
Sbjct: 1   MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60

Query: 61  CVSEFISFITSEYGSDFDNQLASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLT 120
           CVSEFISFITSE         ASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLT
Sbjct: 61  CVSEFISFITSE---------ASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLT 120

Query: 121 KYREVLSRLMLVHCRLFYHYMFCCFDEELLKIELTGDTKGSAKGGDASAKKEAHPT---- 180
           KYRE                               GDTKGSAKGGD SAKKEAHPT    
Sbjct: 121 KYRET-----------------------------EGDTKGSAKGGDGSAKKEAHPTPIPQ 173

Query: 181 -------------SGAQSQAQHLMVPMQGTD 195
                        + +QSQAQHLMVPMQGTD
Sbjct: 181 MAHQGSFSQGVNYASSQSQAQHLMVPMQGTD 173

[Close]

BLAST of Spg033397 vs. ExPASy TrEMBL
Match: A0A1S3B5N5 (nuclear transcription factor Y subunit B-1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486448 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 7.2e-67
Identity = 149/211 (70.62%), Postives = 151/211 (71.56%), Query Frame = 0


Query: 1   MADAPTSPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60
           MADAP SPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE
Sbjct: 1   MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60

Query: 61  CVSEFISFITSEYGSDFDNQLASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLT 120
           CVSEFISFITSE         ASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLT
Sbjct: 61  CVSEFISFITSE---------ASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLT 120

Query: 121 KYREVLSRLMLVHCRLFYHYMFCCFDEELLKIELTGDTKGSAKGGDASAKKEAHPT---- 180
           KYRE                               GDTKGSAKGGD SAKKEAHPT    
Sbjct: 121 KYRET-----------------------------EGDTKGSAKGGDGSAKKEAHPTPIPQ 173

Query: 181 -------------SGAQSQAQHLMVPMQGTD 195
                        + +QSQAQHLMVPMQGTD
Sbjct: 181 MAHQGSFSQGVNYASSQSQAQHLMVPMQGTD 173

[Close]

BLAST of Spg033397 vs. ExPASy TrEMBL
Match: S6DEZ2 (Nuclear transcription factor Y subunit B-8-like OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 9.3e-67
Identity = 149/211 (70.62%), Postives = 151/211 (71.56%), Query Frame = 0


Query: 1   MADAPTSPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60
           MADAP SPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE
Sbjct: 1   MADAPASPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60

Query: 61  CVSEFISFITSEYGSDFDNQLASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLT 120
           CVSEFISFITSE         ASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLT
Sbjct: 61  CVSEFISFITSE---------ASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLT 120

Query: 121 KYREVLSRLMLVHCRLFYHYMFCCFDEELLKIELTGDTKGSAKGGDASAKKEAHPT---- 180
           KYRE                               GDTKGSAKGGD SAKKEAHPT    
Sbjct: 121 KYRE-------------------------------GDTKGSAKGGDGSAKKEAHPTPIPQ 171

Query: 181 -------------SGAQSQAQHLMVPMQGTD 195
                        + +QSQAQHLMVPMQGTD
Sbjct: 181 MAHQGSFSQGVNYASSQSQAQHLMVPMQGTD 171

[Close]

BLAST of Spg033397 vs. TAIR 10
Match: AT2G37060.1 (nuclear factor Y, subunit B8 )

HSP 1 Score: 205.7 bits (522), Expect = 3.4e-53
Identity = 126/204 (61.76%), Postives = 137/204 (67.16%), Query Frame = 0


Query: 7   SPGG-GSHES-GEQSPRS-NVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVS 66
           SPGG GSHES G+QSPRS +VREQDRFLPIANISRIMK+ LPANGKIAKDAKE VQECVS
Sbjct: 8   SPGGCGSHESGGDQSPRSLHVREQDRFLPIANISRIMKRGLPANGKIAKDAKEIVQECVS 67

Query: 67  EFISFITSEYGSDFDNQLASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYR 126
           EFISF+TSE         ASDKCQREKRKTINGDDLLWAMATLGFEDY++PLK YL +YR
Sbjct: 68  EFISFVTSE---------ASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYR 127

Query: 127 EVLSRLMLVHCRLFYHYMFCCFDEELLKIELTGDTKGSAKGGDASAKKE----------- 186
                                        E+ GDTKGSAKGGD +AKK+           
Sbjct: 128 -----------------------------EMEGDTKGSAKGGDPNAKKDGQSSQNGQFSQ 173

Query: 187 -AHPTSGAQSQA-QHLMVPMQGTD 195
            AH      SQA QH+MVPM GTD
Sbjct: 188 LAHQGPYGNSQAQQHMMVPMPGTD 173

[Close]

BLAST of Spg033397 vs. TAIR 10
Match: AT2G37060.2 (nuclear factor Y, subunit B8 )

HSP 1 Score: 205.7 bits (522), Expect = 3.4e-53
Identity = 126/204 (61.76%), Postives = 137/204 (67.16%), Query Frame = 0


Query: 7   SPGG-GSHES-GEQSPRS-NVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVS 66
           SPGG GSHES G+QSPRS +VREQDRFLPIANISRIMK+ LPANGKIAKDAKE VQECVS
Sbjct: 8   SPGGCGSHESGGDQSPRSLHVREQDRFLPIANISRIMKRGLPANGKIAKDAKEIVQECVS 67

Query: 67  EFISFITSEYGSDFDNQLASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYR 126
           EFISF+TSE         ASDKCQREKRKTINGDDLLWAMATLGFEDY++PLK YL +YR
Sbjct: 68  EFISFVTSE---------ASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYR 127

Query: 127 EVLSRLMLVHCRLFYHYMFCCFDEELLKIELTGDTKGSAKGGDASAKKE----------- 186
                                        E+ GDTKGSAKGGD +AKK+           
Sbjct: 128 -----------------------------EMEGDTKGSAKGGDPNAKKDGQSSQNGQFSQ 173

Query: 187 -AHPTSGAQSQA-QHLMVPMQGTD 195
            AH      SQA QH+MVPM GTD
Sbjct: 188 LAHQGPYGNSQAQQHMMVPMPGTD 173

[Close]

BLAST of Spg033397 vs. TAIR 10
Match: AT2G37060.3 (nuclear factor Y, subunit B8 )

HSP 1 Score: 205.7 bits (522), Expect = 3.4e-53
Identity = 126/204 (61.76%), Postives = 137/204 (67.16%), Query Frame = 0


Query: 7   SPGG-GSHES-GEQSPRS-NVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVS 66
           SPGG GSHES G+QSPRS +VREQDRFLPIANISRIMK+ LPANGKIAKDAKE VQECVS
Sbjct: 8   SPGGCGSHESGGDQSPRSLHVREQDRFLPIANISRIMKRGLPANGKIAKDAKEIVQECVS 67

Query: 67  EFISFITSEYGSDFDNQLASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYR 126
           EFISF+TSE         ASDKCQREKRKTINGDDLLWAMATLGFEDY++PLK YL +YR
Sbjct: 68  EFISFVTSE---------ASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYR 127

Query: 127 EVLSRLMLVHCRLFYHYMFCCFDEELLKIELTGDTKGSAKGGDASAKKE----------- 186
                                        E+ GDTKGSAKGGD +AKK+           
Sbjct: 128 -----------------------------EMEGDTKGSAKGGDPNAKKDGQSSQNGQFSQ 173

Query: 187 -AHPTSGAQSQA-QHLMVPMQGTD 195
            AH      SQA QH+MVPM GTD
Sbjct: 188 LAHQGPYGNSQAQQHMMVPMPGTD 173

[Close]

BLAST of Spg033397 vs. TAIR 10
Match: AT3G53340.1 (nuclear factor Y, subunit B10 )

HSP 1 Score: 202.2 bits (513), Expect = 3.8e-52
Identity = 122/214 (57.01%), Postives = 139/214 (64.95%), Query Frame = 0


Query: 1   MADAPT-SPGGGSHES-GEQSPRS-NVREQDRFLPIANISRIMKKALPANGKIAKDAKET 60
           MA++ T   GGGSHES G+QSPRS NVREQDRFLPIANISRIMK+ LP NGKIAKDAKET
Sbjct: 1   MAESQTGGGGGGSHESGGDQSPRSLNVREQDRFLPIANISRIMKRGLPLNGKIAKDAKET 60

Query: 61  VQECVSEFISFITSEYGSDFDNQLASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKT 120
           +QECVSEFISF+TSE         ASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLK 
Sbjct: 61  MQECVSEFISFVTSE---------ASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKV 120

Query: 121 YLTKYREVLSRLMLVHCRLFYHYMFCCFDEELLKIELTGDTKGSAKGGDASAKKEAHPTS 180
           YL +YR                             E+ GDTKGS KGG++SAK++  P+ 
Sbjct: 121 YLMRYR-----------------------------EMEGDTKGSGKGGESSAKRDGQPSQ 176

Query: 181 GAQ-----------------SQAQHLMVPMQGTD 195
            +Q                 SQ  ++MV M GT+
Sbjct: 181 VSQFSQVPQQGSFSQGPYGNSQGSNMMVQMPGTE 176

[Close]

BLAST of Spg033397 vs. TAIR 10
Match: AT2G38880.8 (nuclear factor Y, subunit B1 )

HSP 1 Score: 187.6 bits (475), Expect = 9.6e-48
Identity = 109/183 (59.56%), Postives = 124/183 (67.76%), Query Frame = 0


Query: 1   MADAPTSPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60
           MAD P+SP G   ESG      +VREQDR+LPIANISRIMKKALP NGKI KDAK+TVQE
Sbjct: 1   MADTPSSPAGDGGESG-----GSVREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQE 60

Query: 61  CVSEFISFITSEYGSDFDNQLASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLT 120
           CVSEFISFITSE         ASDKCQ+EKRKT+NGDDLLWAMATLGFEDY++PLK YL 
Sbjct: 61  CVSEFISFITSE---------ASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLA 120

Query: 121 KYREVL---SRLMLVHCRLFYHYMFCCFDEELLKIELTGDTKGSAKGGDASAKKEAHPTS 180
           +YREV    S L +    L  H+         L ++L GD KGS K GD S +      S
Sbjct: 121 RYREVFETNSVLFIPWDWLLTHH---------LLMQLEGDNKGSGKSGDGSNRDAGGGVS 160

The following BLAST results are available for this feature:

BLAST of Spg033397 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948121.1	3.0e-67	71.56	nuclear transcription factor Y subunit B-1-like [Cucurbita moschata] >XP_0229481...	[more]
KAG6596449.1	3.9e-67	71.56	putative LRR receptor-like serine/threonine-protein kinase, partial [Cucurbita a...	[more]
XP_038906090.1	6.6e-67	71.09	nuclear transcription factor Y subunit B-10-like isoform X1 [Benincasa hispida]	[more]
XP_004137802.1	1.5e-66	70.62	nuclear transcription factor Y subunit B-1 isoform X1 [Cucumis sativus] >XP_0084...	[more]
NP_001295779.1	1.9e-66	70.62	nuclear transcription factor Y subunit B-1 [Cucumis sativus] >XP_008442638.1 PRE...	[more]

BLAST of Spg033397 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYK4	4.8e-52	61.76	Nuclear transcription factor Y subunit B-8 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q67XJ2	5.3e-51	57.01	Nuclear transcription factor Y subunit B-10 OS=Arabidopsis thaliana OX=3702 GN=N...	[more]
P25209	1.1e-48	62.63	Nuclear transcription factor Y subunit B OS=Zea mays OX=4577 GN=NFY2 PE=2 SV=1	[more]
Q60EQ4	1.6e-47	59.39	Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q9SLG0	3.7e-44	57.22	Nuclear transcription factor Y subunit B-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of Spg033397 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KSG0	1.4e-67	71.56	nuclear transcription factor Y subunit B-1-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1G8V7	1.4e-67	71.56	nuclear transcription factor Y subunit B-1-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A0A0LAB9	7.2e-67	70.62	CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G7367...	[more]
A0A1S3B5N5	7.2e-67	70.62	nuclear transcription factor Y subunit B-1 isoform X1 OS=Cucumis melo OX=3656 GN...	[more]
S6DEZ2	9.3e-67	70.62	Nuclear transcription factor Y subunit B-8-like OS=Cucumis sativus OX=3659 PE=2 ...	[more]

BLAST of Spg033397 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37060.1	3.4e-53	61.76	nuclear factor Y, subunit B8	[more]
AT2G37060.2	3.4e-53	61.76	nuclear factor Y, subunit B8	[more]
AT2G37060.3	3.4e-53	61.76	nuclear factor Y, subunit B8	[more]
AT3G53340.1	3.8e-52	57.01	nuclear factor Y, subunit B10	[more]
AT2G38880.8	9.6e-48	59.56	nuclear factor Y, subunit B1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00615	CCAATSUBUNTA	coord: 86..104 score: 39.35 coord: 105..123 score: 40.31 coord: 58..76 score: 44.62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..194
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..194
None	No IPR available	PANTHER	PTHR11064:SF133	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-8	coord: 6..185
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 17..188 e-value: 8.5E-44 score: 150.8
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 27..126
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 30..103 e-value: 2.2E-22 score: 79.1
IPR027113	Transcription factor NFYB/HAP3	PANTHER	PTHR11064	CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED	coord: 6..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg033397.1	Spg033397.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
molecular_function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding