Spg033370 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg033370
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionIron-sulphur cluster biosynthesis family protein
Locationscaffold5: 4320432 .. 4323908 (-)
RNA-Seq ExpressionSpg033370
SyntenySpg033370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCCCAGAAGGCTGTGGCGAATACACAGCTGCTGAAAAGGTGAATTTGTGTCTCGCTAGCCCTGTTACACATGCTGCAGCAGTTGGGGGAGAGAGAGGACTCGGGATTTCTTCTCTGAATGATGTCAGCGGTGTTGATACAAGCATGGCTGAGCTCCCATATGAAGAACTTAACTTTTTTAGGCATAGGACCTTTCCACAATTGGCTCTAGAAATCTCTGCTGTTCGGTTGAGATAGAGAAGCCAAATTTCTGGTGAGGGATCCTGTGGAGAAGACACCTTTATCTCCAAGTTGCCAAATCCATATGTCGTCCACATCTCTGAAGGAAAAGGAGGAAAGTTGGTGCGACAATATAGCCCATTCAAGAATTTCGGAGTCCCGTAGGTGTCTTCTTAAATATAAATTCCAAGCCCCATCAATAGGATTCCATAAATCTGCAATAGTAGCCTATTTCTTGAGCGATAGGTTGTAAAGAGATGGATACTTGGATTGTAGAGAGATGCACCCAGCCAAACATCCTCCCAAAACAGTGTTTTGTCCCCTCTACCAACTCTAATGTCAATAGAATTATGACTTTAAAATTTTGGTAGTATAAATATGTTAAATCTTTAAAATTTTGGTATTTATTATGAATTTTGTGATATTCTAGATGGGAAATCTTTCATAACTTGTATCTTTTTTCCCGAAGGGATTGCTTATCCTCTTCTGCAATTTGCTTATTGATATGTGACTTTGATTTCTATTAGAAAAGTGTATCCACTGAAAGTTCTTTATTTGTAGGGAAATATTCTATATCGATTTCCTTCCCTACAGCGCACAGCTTCTTCTCAGCGGAGTGGAAGGAAGGAGTATGTGGGCAGAAAATGGGCCGACTGGGTTGGAGGGATTGAAAAATTTTTCAAAGAAAAGAAATGGGTCTTTAGGTATCATGGTTAAGTTTCTTTGTCTTATTTGGGAGTATAATTTAAATTTAATTAATGGTCTGGAAATTTTTTATTTGCAGTAAAACAAGTTATTCGGAGAGAGCAATGGCCATTGGATTGGGAGGGCTTAATCTGTTTGGTGTTATAGTCCTCGGAGCCATGTTGAAGTATGGATATTATATTTAGACTGGATTGTTTCGTTGTGGTTTATGAAAAAATCTAATAATTTTCTCCCAATTTTATTTTGTAGGGATGTTGCTGTTAAACCAAGTGGACTCATCAAATTTGTATCGGATATATTTCCTCTACTGCAGGTTTGATTTGTTGTAACTTCAAAATTCAGAAATTTCTTTTAGGTCATTTAATTACCTCGGTCATAAAATTGTCCAATGATTTAATTCAATTGGCACTTTATTTTTTATAATTATGAGAAATACTGTGCAGATATATGCGGGTTCTTTCTTCACAATTCCATTGGTCCGGTGGTTCATTATCCAGAAGAGAAATGCTGAAATAGGAAAAAGAAACCAAGCAAGGCAAAAGCGTGCCCAGGCCCTTGAATTGCCAGATGTGTCACTCAGGCGCAAGGTAATGAATGTTTAGATCCCCAAAAGAAGTTTACTGCTCTGTAGATTTGATCATCTGTTTTAGGATCCTATTGGCACCCATTTTAAGAAGAAAGTACCATATGAACGAAGCCCTATTTCGTTTGTTTGTTTTTTTTATTATCAAAATTTTCCTCACCAATGTTCTGTTTGAGCATCATTTAATACTCTAACGATGTCTATTCCACGGTTTCTAGCATGCAATGTGTTGCATTTTTTTGGTGGAACTGCTCATCAGGTGGAAAATTGCCTGTTGATTCACTAAATTTGGGCTGCAAAGTTATTATCCTCTCTTCAGATGCTAGTTCTATTTGCTCTTGTTGGATTCTGTGCTCAAGTCCTGCTTCTCAATCTTTTAAGCATTCTGTTTTCTTTTGGAAAAGCAAATCTCCCTAAATCTCTGCAGCGATTTTGTTTCACCAGAGAATCTAATTCTTTGAATATAATCTTATCAGCTCCTCAGTGCTCGAGACATGGCCCAAAGAACTGTAATTGGTCAGGATCGAATTGTATATAGTACTGATCGAGACTTAATTGAGCAAAATTATGAGCTCCAAGAATGGGAAAGGAAGTTCCGAGAGATAGAAAAGTCAGATTAGAGGATTGGTGGCGTCAATTGCCAATTGGTAAAGTATTGTTATTTGTTTTTCACTCTTTAATCACTGGTAATATATGCACTTACCGCAATGACCAGGCTAAGAATGAAATTCATATTTATGTAGAGAATATTTGCATAATTTTACCATTGATAAAACTGACGGGTAGGTAGGTTTGGTGAATTATTTGTCAGACATTTCATCAAGAGAGTTATGCACAAGAGGTGGAAAATGAAAGCAGAGAATCTTCCTCGACTTCATTACCCAAAAACTTGCTCAGTTAGGCCTTTGTTGACTTTGTAGAATAGACAGAGAACGGATTATACAATCACATGGAAAAATGAAAAAAGATAAGGATGTAATTAGGATCAATTCCTAGAATAATGTTTTGTTAATTTGAACCTAGCTTAACTGGTTAAGATATATACCCTTGACTAAGAGATCAAAGGTTTGAATCCACCGTACATGTTATTGAACTAAAAAATTATTCTAAGTTGTTGAACTAAAAAAATCTCGAGAATAATGTTGTTTCAGTTTCATGAATGTCTGTAATGACCACATTGGAATTAAGTGTCAGATAGGATTGGCAAACCGCCTATCAAGTACAAAGTACACATATTCTAGGAAGAAGGGAGGTAATGTGAAGATATTGGTTAGTTAATACAACTGGTTTGGTATCTTTTGTACGTAAAAATAGATGATGTGAGTTAAGAAAGTACTGAATTAGGTTGAGGCTGGAGCCTCAGACCTCTTGAATAGACCAGGAACTTTGTACTACTTCCCTCTTATTTTGCTCACAACAGCTCAGTGAATTCTCTTTATATTAATTAACACATCAATGTCTTATGTTAATTGTCTCTCATTAGTTTATTTCATTTATGTAGTTCCTTGATTTCAAGGTCTTGACGATGCCCCACGGATACGAAATCACCCGGATTTGACCAAGCTGTTGATTAACCTGCAGGGTATGAGGTTGGCTTTCGATTTTGGTTGGTGAAATTGAACCTCTGTTTGGAAGATTGTTGAAGATTGTGATTCTACTTCGTAACAGAGATGTTTTCTTTTTTAGAAATAGACTGCATAATTGATATTCACTATATAAAAATTGATGGGGGCAGGCTGGGGAAATTGTCGGTCTTGGTGGTAATGGCAAATTCCGATCCTCTTATCATTATCACTGTAAAATTAGATGAACCAAATTGAAAATATAGCACAGAACAATTGCATTCCTATTCGAGTTGCGTTTTATTATAATGCCTTGATGAGGGCACCACTACAAAGTATCAATCATTCAACAGGAAAATCTATAAGTTGATGGTTTAAATAATGTCTCTGTATAACTCAAGCAAA

mRNA sequence

ATGATCCCAGAAGGCTGTGGCGAATACACAGCTGCTGAAAAGGTGAATTTGTGTCTCGCTAGCCCTGTTACACATGCTGCAGCAGTTGGGGGAGAGAGAGGACTCGGGATTTCTTCTCTGAATGATGTCAGCGGTGTTGATACAAGCATGGCTGAGCTCCCATATGAAGAACTTAACTTTTTTAGGCATAGGACCTTTCCACAATTGGCTCTAGAAATCTCTGCTGGAAATATTCTATATCGATTTCCTTCCCTACAGCGCACAGCTTCTTCTCAGCGGAGTGGAAGGAAGGAGTATGTGGGCAGAAAATGGGCCGACTGGGTTGGAGGGATTGAAAAATTTTTCAAAGAAAAGAAATGGGTCTTTAGTAAAACAAGTTATTCGGAGAGAGCAATGGCCATTGGATTGGGAGGGCTTAATCTGTTTGGTGTTATAGTCCTCGGAGCCATGTTGAAGGATGTTGCTGTTAAACCAAGTGGACTCATCAAATTTGTATCGGATATATTTCCTCTACTGCAGATATATGCGGGTTCTTTCTTCACAATTCCATTGGTCCGGTGGTTCATTATCCAGAAGAGAAATGCTGAAATAGGAAAAAGAAACCAAGCAAGGCAAAAGCGTGCCCAGGCCCTTGAATTGCCAGATGTGTCACTCAGGCGCAAGCTCCTCAGTGCTCGAGACATGGCCCAAAGAACTGTAATTGGTCAGGATCGAATTGTATATAGTACTGATCGAGACTTAATTGAGCAAAATTATGAGCTCCAAGAATGGGAAAGGAAGTTCCGAGAGATAGAAAAGTCAGATTAG

Coding sequence (CDS)

ATGATCCCAGAAGGCTGTGGCGAATACACAGCTGCTGAAAAGGTGAATTTGTGTCTCGCTAGCCCTGTTACACATGCTGCAGCAGTTGGGGGAGAGAGAGGACTCGGGATTTCTTCTCTGAATGATGTCAGCGGTGTTGATACAAGCATGGCTGAGCTCCCATATGAAGAACTTAACTTTTTTAGGCATAGGACCTTTCCACAATTGGCTCTAGAAATCTCTGCTGGAAATATTCTATATCGATTTCCTTCCCTACAGCGCACAGCTTCTTCTCAGCGGAGTGGAAGGAAGGAGTATGTGGGCAGAAAATGGGCCGACTGGGTTGGAGGGATTGAAAAATTTTTCAAAGAAAAGAAATGGGTCTTTAGTAAAACAAGTTATTCGGAGAGAGCAATGGCCATTGGATTGGGAGGGCTTAATCTGTTTGGTGTTATAGTCCTCGGAGCCATGTTGAAGGATGTTGCTGTTAAACCAAGTGGACTCATCAAATTTGTATCGGATATATTTCCTCTACTGCAGATATATGCGGGTTCTTTCTTCACAATTCCATTGGTCCGGTGGTTCATTATCCAGAAGAGAAATGCTGAAATAGGAAAAAGAAACCAAGCAAGGCAAAAGCGTGCCCAGGCCCTTGAATTGCCAGATGTGTCACTCAGGCGCAAGCTCCTCAGTGCTCGAGACATGGCCCAAAGAACTGTAATTGGTCAGGATCGAATTGTATATAGTACTGATCGAGACTTAATTGAGCAAAATTATGAGCTCCAAGAATGGGAAAGGAAGTTCCGAGAGATAGAAAAGTCAGATTAG

Protein sequence

MIPEGCGEYTAAEKVNLCLASPVTHAAAVGGERGLGISSLNDVSGVDTSMAELPYEELNFFRHRTFPQLALEISAGNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIGLGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIYAGSFFTIPLVRWFIIQKRNAEIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQEWERKFREIEKSD
Homology
[Close]
BLAST of Spg033370 vs. NCBI nr
Match: XP_022925696.1 (uncharacterized protein At5g03900-like [Cucurbita moschata] >XP_022925779.1 uncharacterized protein At5g03900-like [Cucurbita moschata])

HSP 1 Score: 370.9 bits (951), Expect = 9.1e-99
Identity = 190/193 (98.45%), Postives = 191/193 (98.96%), Query Frame = 0 

Query: 76  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIG 135
           GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEK+WVFSKTSYSERAMAIG
Sbjct: 327 GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKEWVFSKTSYSERAMAIG 386

Query: 136 LGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIYAGSFFTIPLVRWFIIQKRNA 195
           LGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIYAGSFF IPLVRWFI QKRNA
Sbjct: 387 LGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIYAGSFFAIPLVRWFITQKRNA 446

Query: 196 EIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQ 255
           EIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQ
Sbjct: 447 EIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQ 506

Query: 256 EWERKFREIEKSD 269
           EWERKFREIEKSD
Sbjct: 507 EWERKFREIEKSD 519

[Close]
BLAST of Spg033370 vs. NCBI nr
Match: XP_023540361.1 (LOW QUALITY PROTEIN: uncharacterized protein At5g03900, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 370.5 bits (950), Expect = 1.2e-98
Identity = 190/193 (98.45%), Postives = 190/193 (98.45%), Query Frame = 0 

Query: 76  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIG 135
           GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIE FFKEKKWVFSKTSYSERAMAIG
Sbjct: 333 GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIENFFKEKKWVFSKTSYSERAMAIG 392

Query: 136 LGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIYAGSFFTIPLVRWFIIQKRNA 195
           LGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIYAGSFF IPLVRWFI QKRNA
Sbjct: 393 LGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIYAGSFFAIPLVRWFITQKRNA 452

Query: 196 EIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQ 255
           EIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQ
Sbjct: 453 EIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQ 512

Query: 256 EWERKFREIEKSD 269
           EWERKFREIEKSD
Sbjct: 513 EWERKFREIEKSD 525

[Close]
BLAST of Spg033370 vs. NCBI nr
Match: XP_038904835.1 (uncharacterized protein At5g03900, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 370.2 bits (949), Expect = 1.5e-98
Identity = 189/193 (97.93%), Postives = 192/193 (99.48%), Query Frame = 0 

Query: 76  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIG 135
           GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGG+EKFFKEKKWVFSKTS SERAMAIG
Sbjct: 327 GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGVEKFFKEKKWVFSKTSNSERAMAIG 386

Query: 136 LGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIYAGSFFTIPLVRWFIIQKRNA 195
           LGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIYAGSFFTIPLVRWFIIQKRNA
Sbjct: 387 LGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIYAGSFFTIPLVRWFIIQKRNA 446

Query: 196 EIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQ 255
           EIGKRN+ARQKRAQALELPDV+LRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQ
Sbjct: 447 EIGKRNEARQKRAQALELPDVTLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQ 506

Query: 256 EWERKFREIEKSD 269
           EWERKFREIEKSD
Sbjct: 507 EWERKFREIEKSD 519

[Close]
BLAST of Spg033370 vs. NCBI nr
Match: XP_023005813.1 (uncharacterized protein At5g03900, chloroplastic-like [Cucurbita maxima] >XP_023005814.1 uncharacterized protein At5g03900, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 369.8 bits (948), Expect = 2.0e-98
Identity = 190/193 (98.45%), Postives = 190/193 (98.45%), Query Frame = 0 

Query: 76  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIG 135
           GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIG
Sbjct: 324 GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIG 383

Query: 136 LGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIYAGSFFTIPLVRWFIIQKRNA 195
           LGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIYAGSFF IPLVRWFI QKRNA
Sbjct: 384 LGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIYAGSFFAIPLVRWFITQKRNA 443

Query: 196 EIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQ 255
           EIGKRNQARQK AQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQ
Sbjct: 444 EIGKRNQARQKLAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQ 503

Query: 256 EWERKFREIEKSD 269
           EWERKFREIEKSD
Sbjct: 504 EWERKFREIEKSD 516

[Close]
BLAST of Spg033370 vs. NCBI nr
Match: XP_022144706.1 (uncharacterized protein At5g03900, chloroplastic isoform X1 [Momordica charantia] >XP_022144708.1 uncharacterized protein At5g03900, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 367.1 bits (941), Expect = 1.3e-97
Identity = 186/193 (96.37%), Postives = 191/193 (98.96%), Query Frame = 0 

Query: 76  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIG 135
           GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGG+EKFFKEKKWVFSKT+ SERAMAIG
Sbjct: 324 GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGVEKFFKEKKWVFSKTTSSERAMAIG 383

Query: 136 LGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIYAGSFFTIPLVRWFIIQKRNA 195
           LGGLNLFGVI+LG MLKDVA+KPSGLIKFVSDIFPLLQIYAGSFFTIPLVRWFIIQKRNA
Sbjct: 384 LGGLNLFGVIILGTMLKDVAIKPSGLIKFVSDIFPLLQIYAGSFFTIPLVRWFIIQKRNA 443

Query: 196 EIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQ 255
           EIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQ+YELQ
Sbjct: 444 EIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQDYELQ 503

Query: 256 EWERKFREIEKSD 269
           EWERKFREIEKSD
Sbjct: 504 EWERKFREIEKSD 516

[Close]
BLAST of Spg033370 vs. ExPASy Swiss-Prot
Match: Q8GW20 (Uncharacterized protein At5g03900, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g03900 PE=2 SV=2)

HSP 1 Score: 268.5 bits (685), Expect = 8.3e-71
Identity = 135/193 (69.95%), Postives = 164/193 (84.97%), Query Frame = 0 

Query: 76  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIG 135
           GNILY FPSLQRTAS   S RKEYVG KW DWV  +EKFFKEKKW FSKTS SERA+ IG
Sbjct: 333 GNILYCFPSLQRTASGS-SRRKEYVG-KWFDWVADMEKFFKEKKWQFSKTSTSERALVIG 392

Query: 136 LGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIYAGSFFTIPLVRWFIIQKRNA 195
           LG +NLFGVIVL  +L +++V+P G + FV +I+PLLQIYAGSFFTIPL+RWF I+++N 
Sbjct: 393 LGAVNLFGVIVLNTLLNEMSVRPGGFLTFVKNIYPLLQIYAGSFFTIPLIRWFSIKRKNN 452

Query: 196 EIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQ 255
           +I  RN+AR + A+ALE PD++LRRKLLSARDMAQ+TVIG+DRIVYSTDRD++EQNYE  
Sbjct: 453 QIENRNKARLQFARALESPDIALRRKLLSARDMAQKTVIGKDRIVYSTDRDMMEQNYETD 512

Query: 256 EWERKFREIEKSD 269
           EW+R+F+E+EKSD
Sbjct: 513 EWDRRFKELEKSD 523

[Close]
BLAST of Spg033370 vs. ExPASy TrEMBL
Match: A0A6J1ECX3 (uncharacterized protein At5g03900-like OS=Cucurbita moschata OX=3662 GN=LOC111433007 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 4.4e-99
Identity = 190/193 (98.45%), Postives = 191/193 (98.96%), Query Frame = 0 

Query: 76  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIG 135
           GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEK+WVFSKTSYSERAMAIG
Sbjct: 327 GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKEWVFSKTSYSERAMAIG 386

Query: 136 LGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIYAGSFFTIPLVRWFIIQKRNA 195
           LGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIYAGSFF IPLVRWFI QKRNA
Sbjct: 387 LGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIYAGSFFAIPLVRWFITQKRNA 446

Query: 196 EIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQ 255
           EIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQ
Sbjct: 447 EIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQ 506

Query: 256 EWERKFREIEKSD 269
           EWERKFREIEKSD
Sbjct: 507 EWERKFREIEKSD 519

[Close]
BLAST of Spg033370 vs. ExPASy TrEMBL
Match: A0A6J1L381 (uncharacterized protein At5g03900, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111498707 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 9.8e-99
Identity = 190/193 (98.45%), Postives = 190/193 (98.45%), Query Frame = 0 

Query: 76  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIG 135
           GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIG
Sbjct: 324 GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIG 383

Query: 136 LGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIYAGSFFTIPLVRWFIIQKRNA 195
           LGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIYAGSFF IPLVRWFI QKRNA
Sbjct: 384 LGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIYAGSFFAIPLVRWFITQKRNA 443

Query: 196 EIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQ 255
           EIGKRNQARQK AQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQ
Sbjct: 444 EIGKRNQARQKLAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQ 503

Query: 256 EWERKFREIEKSD 269
           EWERKFREIEKSD
Sbjct: 504 EWERKFREIEKSD 516

[Close]
BLAST of Spg033370 vs. ExPASy TrEMBL
Match: A0A6J1CU13 (uncharacterized protein At5g03900, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014330 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 6.3e-98
Identity = 186/193 (96.37%), Postives = 191/193 (98.96%), Query Frame = 0 

Query: 76  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIG 135
           GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGG+EKFFKEKKWVFSKT+ SERAMAIG
Sbjct: 324 GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGVEKFFKEKKWVFSKTTSSERAMAIG 383

Query: 136 LGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIYAGSFFTIPLVRWFIIQKRNA 195
           LGGLNLFGVI+LG MLKDVA+KPSGLIKFVSDIFPLLQIYAGSFFTIPLVRWFIIQKRNA
Sbjct: 384 LGGLNLFGVIILGTMLKDVAIKPSGLIKFVSDIFPLLQIYAGSFFTIPLVRWFIIQKRNA 443

Query: 196 EIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQ 255
           EIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQ+YELQ
Sbjct: 444 EIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQDYELQ 503

Query: 256 EWERKFREIEKSD 269
           EWERKFREIEKSD
Sbjct: 504 EWERKFREIEKSD 516

[Close]
BLAST of Spg033370 vs. ExPASy TrEMBL
Match: A0A0A0LE13 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G776940 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 8.3e-98
Identity = 187/193 (96.89%), Postives = 191/193 (98.96%), Query Frame = 0 

Query: 76  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIG 135
           GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEK FKEKKWVFSKTS SERAMAIG
Sbjct: 324 GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKIFKEKKWVFSKTSNSERAMAIG 383

Query: 136 LGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIYAGSFFTIPLVRWFIIQKRNA 195
           LGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIYAGSFFTIPLVRWFI+QKRNA
Sbjct: 384 LGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIYAGSFFTIPLVRWFIVQKRNA 443

Query: 196 EIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQ 255
           EIGKRN+ARQKRAQALELPDV+LRRKLLSARDMAQ+TVIGQDRIVYSTDRDLIEQNYELQ
Sbjct: 444 EIGKRNEARQKRAQALELPDVTLRRKLLSARDMAQKTVIGQDRIVYSTDRDLIEQNYELQ 503

Query: 256 EWERKFREIEKSD 269
           EWERKFREIEKSD
Sbjct: 504 EWERKFREIEKSD 516

[Close]
BLAST of Spg033370 vs. ExPASy TrEMBL
Match: A0A1S3B7F8 (uncharacterized protein At5g03900, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486612 PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 3.1e-97
Identity = 187/193 (96.89%), Postives = 190/193 (98.45%), Query Frame = 0 

Query: 76  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIG 135
           GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTS SERAMAIG
Sbjct: 324 GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSNSERAMAIG 383

Query: 136 LGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIYAGSFFTIPLVRWFIIQKRNA 195
           LGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIYAGSFFTIPLVRWFIIQKRNA
Sbjct: 384 LGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIYAGSFFTIPLVRWFIIQKRNA 443

Query: 196 EIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQ 255
           EIGKRN+ARQKRAQALELPDV+LRRKLLSARDMAQ+TVI  DRIVYSTDRDLIEQNYELQ
Sbjct: 444 EIGKRNEARQKRAQALELPDVTLRRKLLSARDMAQKTVISPDRIVYSTDRDLIEQNYELQ 503

Query: 256 EWERKFREIEKSD 269
           EWERKFREIEKSD
Sbjct: 504 EWERKFREIEKSD 516

[Close]
BLAST of Spg033370 vs. TAIR 10
Match: AT5G03900.2 (Iron-sulphur cluster biosynthesis family protein )

HSP 1 Score: 268.5 bits (685), Expect = 5.9e-72
Identity = 135/193 (69.95%), Postives = 164/193 (84.97%), Query Frame = 0 

Query: 76  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIG 135
           GNILY FPSLQRTAS   S RKEYVG KW DWV  +EKFFKEKKW FSKTS SERA+ IG
Sbjct: 333 GNILYCFPSLQRTASGS-SRRKEYVG-KWFDWVADMEKFFKEKKWQFSKTSTSERALVIG 392

Query: 136 LGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQIYAGSFFTIPLVRWFIIQKRNA 195
           LG +NLFGVIVL  +L +++V+P G + FV +I+PLLQIYAGSFFTIPL+RWF I+++N 
Sbjct: 393 LGAVNLFGVIVLNTLLNEMSVRPGGFLTFVKNIYPLLQIYAGSFFTIPLIRWFSIKRKNN 452

Query: 196 EIGKRNQARQKRAQALELPDVSLRRKLLSARDMAQRTVIGQDRIVYSTDRDLIEQNYELQ 255
           +I  RN+AR + A+ALE PD++LRRKLLSARDMAQ+TVIG+DRIVYSTDRD++EQNYE  
Sbjct: 453 QIENRNKARLQFARALESPDIALRRKLLSARDMAQKTVIGKDRIVYSTDRDMMEQNYETD 512

Query: 256 EWERKFREIEKSD 269
           EW+R+F+E+EKSD
Sbjct: 513 EWDRRFKELEKSD 523

[Close]
BLAST of Spg033370 vs. TAIR 10
Match: AT5G03900.1 (Iron-sulphur cluster biosynthesis family protein )

HSP 1 Score: 132.1 bits (331), Expect = 6.6e-31
Identity = 67/99 (67.68%), Postives = 79/99 (79.80%), Query Frame = 0 

Query: 76  GNILYRFPSLQRTASSQRSGRKEYVGRKWADWVGGIEKFFKEKKWVFSKTSYSERAMAIG 135
           GNILY FPSLQRTAS   S RKEYVG KW DWV  +EKFFKEKKW FSKTS SERA+ IG
Sbjct: 333 GNILYCFPSLQRTASGS-SRRKEYVG-KWFDWVADMEKFFKEKKWQFSKTSTSERALVIG 392

Query: 136 LGGLNLFGVIVLGAMLKDVAVKPSGLIKFVSDIFPLLQI 175
           LG +NLFGVIVL  +L +++V+P G + FV +I+PLLQ+
Sbjct: 393 LGAVNLFGVIVLNTLLNEMSVRPGGFLTFVKNIYPLLQV 429

The following BLAST results are available for this feature:
BLAST of Spg033370 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022925696.19.1e-9998.45uncharacterized protein At5g03900-like [Cucurbita moschata] >XP_022925779.1 unch... [more]
XP_023540361.11.2e-9898.45LOW QUALITY PROTEIN: uncharacterized protein At5g03900, chloroplastic-like [Cucu... [more]
XP_038904835.11.5e-9897.93uncharacterized protein At5g03900, chloroplastic isoform X1 [Benincasa hispida][more]
XP_023005813.12.0e-9898.45uncharacterized protein At5g03900, chloroplastic-like [Cucurbita maxima] >XP_023... [more]
XP_022144706.11.3e-9796.37uncharacterized protein At5g03900, chloroplastic isoform X1 [Momordica charantia... [more]
BLAST of Spg033370 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8GW208.3e-7169.95Uncharacterized protein At5g03900, chloroplastic OS=Arabidopsis thaliana OX=3702... [more]
BLAST of Spg033370 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1ECX34.4e-9998.45uncharacterized protein At5g03900-like OS=Cucurbita moschata OX=3662 GN=LOC11143... [more]
A0A6J1L3819.8e-9998.45uncharacterized protein At5g03900, chloroplastic-like OS=Cucurbita maxima OX=366... [more]
A0A6J1CU136.3e-9896.37uncharacterized protein At5g03900, chloroplastic isoform X1 OS=Momordica charant... [more]
A0A0A0LE138.3e-9896.89Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G776940 PE=4 SV=1[more]
A0A1S3B7F83.1e-9796.89uncharacterized protein At5g03900, chloroplastic OS=Cucumis melo OX=3656 GN=LOC1... [more]
BLAST of Spg033370 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G03900.25.9e-7269.95Iron-sulphur cluster biosynthesis family protein [more]
AT5G03900.16.6e-3167.68Iron-sulphur cluster biosynthesis family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 247..267
IPR044200Uncharacterized protein At5g03900-likePANTHERPTHR47380OS02G0533000 PROTEINcoord: 75..267

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg033370.1Spg033370.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane