Spg033344 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg033344
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionNuclear transport factor 2 (NTF2) family protein
Locationscaffold5: 1571774 .. 1573128 (+)
RNA-Seq ExpressionSpg033344
SyntenySpg033344
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCTCCATACATCTAATCTATGCTGCAATGTGAGTACTGCTTCTGTTAGTTGATTTTCTCATACCGTTAATATCTATTTATTTTGTTCTTCTCTTTCTACCTTTTATCATTATTGCTATTTCAAGTGCATTTGTTACTGTAATTGATTTATATGCGTTCTTCATTATAGTAAAGTGTCTCTCTGTTTAATTTTTCTTTTATAAGCTTCATCTGGAATCTGGACGTCAATTTTGAAATAATTCAGTGATATTGTGATTTTCTAGGGTTATGTTACATTCATTGGCAATCGGAAGAGTGTACGTTGTTTCCAGAGTTTTGAGGTGTTTCGTCATGTTCCTTTAGCTTTCCCTAAGAAATTTGATATTGGCCTGGTTAAAGCGTCCAGAGGGGGATATGGAAATTTCAGTAAGTTTCCTTGAAATTTTATCATTTCCAGGAGCTCTAATCAACTCCTCTATATGCTGCTTTTGAAGTTTGTTTTAGCTTTCATTACCTTTGTGAAATCTGAACTTTCGAGTCAGTACAATGTAGATATCGTATATAAAGATGGATAGACTGATATAGATATACACAGAGTTCTGTATAATTGAACTTTGGATCTTGCTCCAATTTCTTCAGTAAATCAGCATTTTGTTAATATCTAGTGCAGGGCCATGTAAACAAACTTCCAGGATGCTCTCATTCCAAACTTGCCGACTGAAAGCTGAGAACTCGAGCGGTGAAAGCGTTACACTTGATGCAAAAACTTTGGAGCAGGACCTGCAAAATGCCATTGCAGATGAAGATTACGCCAGAGCTGCACAAATCAGAGATACCTTGAAAGCTCTTCAAGAGGATAGCAAAACTTCAGTATTGGCAGCCAATGCTAAGTTTTACGAAGCGTTTCGGACTGGGGATCTTGCTGCAATGCAAACTCTATGGGCACGAGGAGATAGTGTCTGCTGCGTGCACCCGGGCATGAGGGGGATATCGGGGTACGACGACGTTATGACCAGCTGGGAGTATGTATGGGCGAACTATGAGTTCCCACTGGAGATTCAACTCAAGGACGTTCAAGTTCATGCTAGAGGGGAAGTTGGCTATGTTACATGTGTGGAATTGGTGAAGACGAAAGGTAGCAGTTGGGGGGGACAGTTTGTTACCAACGTGTTTGAGAGAATTAATGGTCAATGGTTCATCTGTATTCACCATGCCTCACCTATAGATTTGTAGTAAAAACATTCAATTGCTCGATTAAGATTTGTCTCAGTTTGTATCGCCATTACGCTTGCAATAATTTCAATGTTTCCCACAATCGAGAGACGTGTTCCATGAAACTAGTTTAAAAGACTTGTTGGACACTTAACCTATT

mRNA sequence

ATGGCGCTCCATACATCTAATCTATGCTGCAATGTGAGTACTGCTTCTGGTTATGTTACATTCATTGGCAATCGGAAGAGTGTACGTTGTTTCCAGAGTTTTGAGGTGTTTCGTCATGTTCCTTTAGCTTTCCCTAAGAAATTTGATATTGGCCTGGTTAAAGCGTCCAGAGGGGGATATGGAAATTTCAGGCCATGTAAACAAACTTCCAGGATGCTCTCATTCCAAACTTGCCGACTGAAAGCTGAGAACTCGAGCGGTGAAAGCGTTACACTTGATGCAAAAACTTTGGAGCAGGACCTGCAAAATGCCATTGCAGATGAAGATTACGCCAGAGCTGCACAAATCAGAGATACCTTGAAAGCTCTTCAAGAGGATAGCAAAACTTCAGTATTGGCAGCCAATGCTAAGTTTTACGAAGCGTTTCGGACTGGGGATCTTGCTGCAATGCAAACTCTATGGGCACGAGGAGATAGTGTCTGCTGCGTGCACCCGGGCATGAGGGGGATATCGGGGTACGACGACGTTATGACCAGCTGGGAGTATGTATGGGCGAACTATGAGTTCCCACTGGAGATTCAACTCAAGGACGTTCAAGTTCATGCTAGAGGGGAAGTTGGCTATGTTACATGTGTGGAATTGGTGAAGACGAAAGGTAGCAGTTGGGGGGGACAGTTTGTTACCAACGTGTTTGAGAGAATTAATGGTCAATGGTTCATCTGTATTCACCATGCCTCACCTATAGATTTGTAG

Coding sequence (CDS)

ATGGCGCTCCATACATCTAATCTATGCTGCAATGTGAGTACTGCTTCTGGTTATGTTACATTCATTGGCAATCGGAAGAGTGTACGTTGTTTCCAGAGTTTTGAGGTGTTTCGTCATGTTCCTTTAGCTTTCCCTAAGAAATTTGATATTGGCCTGGTTAAAGCGTCCAGAGGGGGATATGGAAATTTCAGGCCATGTAAACAAACTTCCAGGATGCTCTCATTCCAAACTTGCCGACTGAAAGCTGAGAACTCGAGCGGTGAAAGCGTTACACTTGATGCAAAAACTTTGGAGCAGGACCTGCAAAATGCCATTGCAGATGAAGATTACGCCAGAGCTGCACAAATCAGAGATACCTTGAAAGCTCTTCAAGAGGATAGCAAAACTTCAGTATTGGCAGCCAATGCTAAGTTTTACGAAGCGTTTCGGACTGGGGATCTTGCTGCAATGCAAACTCTATGGGCACGAGGAGATAGTGTCTGCTGCGTGCACCCGGGCATGAGGGGGATATCGGGGTACGACGACGTTATGACCAGCTGGGAGTATGTATGGGCGAACTATGAGTTCCCACTGGAGATTCAACTCAAGGACGTTCAAGTTCATGCTAGAGGGGAAGTTGGCTATGTTACATGTGTGGAATTGGTGAAGACGAAAGGTAGCAGTTGGGGGGGACAGTTTGTTACCAACGTGTTTGAGAGAATTAATGGTCAATGGTTCATCTGTATTCACCATGCCTCACCTATAGATTTGTAG

Protein sequence

MALHTSNLCCNVSTASGYVTFIGNRKSVRCFQSFEVFRHVPLAFPKKFDIGLVKASRGGYGNFRPCKQTSRMLSFQTCRLKAENSSGESVTLDAKTLEQDLQNAIADEDYARAAQIRDTLKALQEDSKTSVLAANAKFYEAFRTGDLAAMQTLWARGDSVCCVHPGMRGISGYDDVMTSWEYVWANYEFPLEIQLKDVQVHARGEVGYVTCVELVKTKGSSWGGQFVTNVFERINGQWFICIHHASPIDL
Homology
BLAST of Spg033344 vs. NCBI nr
Match: KAG6596375.1 (F-box protein SKIP8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 448.0 bits (1151), Expect = 5.4e-122
Identity = 219/265 (82.64%), Postives = 235/265 (88.68%), Query Frame = 0

Query: 1   MALHTSNLCCNVSTASGYVTFIGNRKSVRCFQSFEVFRHVPLAFPKKFDIGLVKASRGGY 60
           MALHTS+LCCN     GYVTFI NRKSVRC QS EVF HVPLA PK++DIGLVKAS GGY
Sbjct: 8   MALHTSSLCCN-----GYVTFISNRKSVRCSQSCEVFHHVPLALPKQYDIGLVKASIGGY 67

Query: 61  ---------------GNFRPCKQTSRMLSFQTCRLKAENSSGESVTLDAKTLEQDLQNAI 120
                          GNFRPCKQ++RMLSF+ C+LKAENSSGES+TLDA+TL+QDLQNAI
Sbjct: 68  GFVSPSIPRCLGSTIGNFRPCKQSTRMLSFRPCQLKAENSSGESITLDAETLKQDLQNAI 127

Query: 121 ADEDYARAAQIRDTLKALQEDSKTSVLAANAKFYEAFRTGDLAAMQTLWARGDSVCCVHP 180
           ADEDYARAA+IRDTLKALQEDSK SV AANAKFYE+FR GDLAAMQTLWARGDSVCCVHP
Sbjct: 128 ADEDYARAAEIRDTLKALQEDSKASVFAANAKFYESFRNGDLAAMQTLWARGDSVCCVHP 187

Query: 181 GMRGISGYDDVMTSWEYVWANYEFPLEIQLKDVQVHARGEVGYVTCVELVKTKGSSWGGQ 240
           GMRGISGYD+V+TSWEYVWANYEFPLEIQLKDV+VHARG+VGYVTCVELVKTKGSSWGGQ
Sbjct: 188 GMRGISGYDNVITSWEYVWANYEFPLEIQLKDVEVHARGDVGYVTCVELVKTKGSSWGGQ 247

Query: 241 FVTNVFERINGQWFICIHHASPIDL 251
           FVTNVFERINGQWFICIHHASPIDL
Sbjct: 248 FVTNVFERINGQWFICIHHASPIDL 267

BLAST of Spg033344 vs. NCBI nr
Match: KAG7027924.1 (F-box protein SKIP8 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 446.0 bits (1146), Expect = 2.1e-121
Identity = 218/265 (82.26%), Postives = 235/265 (88.68%), Query Frame = 0

Query: 1   MALHTSNLCCNVSTASGYVTFIGNRKSVRCFQSFEVFRHVPLAFPKKFDIGLVKASRGGY 60
           MALHTS+LCC+     GYVTFI NRKSVRC QS EVF HVPLA PK++DIGLVKAS GGY
Sbjct: 8   MALHTSSLCCH-----GYVTFISNRKSVRCSQSCEVFHHVPLALPKQYDIGLVKASIGGY 67

Query: 61  ---------------GNFRPCKQTSRMLSFQTCRLKAENSSGESVTLDAKTLEQDLQNAI 120
                          GNFRPCKQ++RMLSF+ C+LKAENSSGES+TLDA+TL+QDLQNAI
Sbjct: 68  GFVSPSIPRCLGSTIGNFRPCKQSTRMLSFRPCQLKAENSSGESITLDAETLKQDLQNAI 127

Query: 121 ADEDYARAAQIRDTLKALQEDSKTSVLAANAKFYEAFRTGDLAAMQTLWARGDSVCCVHP 180
           ADEDYARAA+IRDTLKALQEDSK SV AANAKFYE+FR GDLAAMQTLWARGDSVCCVHP
Sbjct: 128 ADEDYARAAEIRDTLKALQEDSKASVFAANAKFYESFRNGDLAAMQTLWARGDSVCCVHP 187

Query: 181 GMRGISGYDDVMTSWEYVWANYEFPLEIQLKDVQVHARGEVGYVTCVELVKTKGSSWGGQ 240
           GMRGISGYD+V+TSWEYVWANYEFPLEIQLKDV+VHARG+VGYVTCVELVKTKGSSWGGQ
Sbjct: 188 GMRGISGYDNVITSWEYVWANYEFPLEIQLKDVEVHARGDVGYVTCVELVKTKGSSWGGQ 247

Query: 241 FVTNVFERINGQWFICIHHASPIDL 251
           FVTNVFERINGQWFICIHHASPIDL
Sbjct: 248 FVTNVFERINGQWFICIHHASPIDL 267

BLAST of Spg033344 vs. NCBI nr
Match: XP_022941815.1 (uncharacterized protein LOC111447066 [Cucurbita moschata])

HSP 1 Score: 444.1 bits (1141), Expect = 7.9e-121
Identity = 218/265 (82.26%), Postives = 233/265 (87.92%), Query Frame = 0

Query: 1   MALHTSNLCCNVSTASGYVTFIGNRKSVRCFQSFEVFRHVPLAFPKKFDIGLVKASRGGY 60
           MALHTS+LCCN     GYVTFI NRKSVRC QS EVF HVP A PK++DIGLVKAS GGY
Sbjct: 8   MALHTSSLCCN-----GYVTFISNRKSVRCSQSCEVFYHVPSALPKQYDIGLVKASIGGY 67

Query: 61  ---------------GNFRPCKQTSRMLSFQTCRLKAENSSGESVTLDAKTLEQDLQNAI 120
                          GNFRPCKQ+SRMLSF+ C+LKAENSSGES+TLDA+ L+QDLQNAI
Sbjct: 68  GFVSPSIPRCLGSTIGNFRPCKQSSRMLSFRPCQLKAENSSGESITLDAEALKQDLQNAI 127

Query: 121 ADEDYARAAQIRDTLKALQEDSKTSVLAANAKFYEAFRTGDLAAMQTLWARGDSVCCVHP 180
           ADEDYARAA+IRDTLKALQEDSK SV AANAKFYE+FR GDLAAMQTLWARGDSVCCVHP
Sbjct: 128 ADEDYARAAEIRDTLKALQEDSKASVFAANAKFYESFRNGDLAAMQTLWARGDSVCCVHP 187

Query: 181 GMRGISGYDDVMTSWEYVWANYEFPLEIQLKDVQVHARGEVGYVTCVELVKTKGSSWGGQ 240
           GMRGISGYD+V+TSWEYVWANYEFPLEIQLKDV+VHARG+VGYVTCVELVKTKGSSWGGQ
Sbjct: 188 GMRGISGYDNVITSWEYVWANYEFPLEIQLKDVEVHARGDVGYVTCVELVKTKGSSWGGQ 247

Query: 241 FVTNVFERINGQWFICIHHASPIDL 251
           FVTNVFERINGQWFICIHHASPIDL
Sbjct: 248 FVTNVFERINGQWFICIHHASPIDL 267

BLAST of Spg033344 vs. NCBI nr
Match: XP_022971333.1 (uncharacterized protein LOC111470086 [Cucurbita maxima])

HSP 1 Score: 441.0 bits (1133), Expect = 6.7e-120
Identity = 215/265 (81.13%), Postives = 231/265 (87.17%), Query Frame = 0

Query: 1   MALHTSNLCCNVSTASGYVTFIGNRKSVRCFQSFEVFRHVPLAFPKKFDIGLVKASRGGY 60
           MALHTS+LCCN     GYVTFI NRK+VRC QS EVF HVP A PK++DIG VK S GGY
Sbjct: 1   MALHTSSLCCN-----GYVTFISNRKNVRCSQSCEVFHHVPSALPKQYDIGFVKESTGGY 60

Query: 61  ---------------GNFRPCKQTSRMLSFQTCRLKAENSSGESVTLDAKTLEQDLQNAI 120
                          GNFRPCKQ++RMLSF+ C+LKAENSSGES+TLDA+TL+QDLQNAI
Sbjct: 61  GFLFPSIPRCLGSTIGNFRPCKQSTRMLSFRPCQLKAENSSGESITLDAETLKQDLQNAI 120

Query: 121 ADEDYARAAQIRDTLKALQEDSKTSVLAANAKFYEAFRTGDLAAMQTLWARGDSVCCVHP 180
           ADEDYARAA+IRDTLKALQEDSK SV AANAKFYE+FR GDLAAMQTLWARGDSVCCVHP
Sbjct: 121 ADEDYARAAEIRDTLKALQEDSKASVFAANAKFYESFRNGDLAAMQTLWARGDSVCCVHP 180

Query: 181 GMRGISGYDDVMTSWEYVWANYEFPLEIQLKDVQVHARGEVGYVTCVELVKTKGSSWGGQ 240
           GMRGI GYD+VMTSWEYVWANYEFPLEIQLKDV+VHARG+VGYVTCVELVKTKGSSWGGQ
Sbjct: 181 GMRGILGYDNVMTSWEYVWANYEFPLEIQLKDVEVHARGDVGYVTCVELVKTKGSSWGGQ 240

Query: 241 FVTNVFERINGQWFICIHHASPIDL 251
           FVTNVFERINGQWFICIHHASPIDL
Sbjct: 241 FVTNVFERINGQWFICIHHASPIDL 260

BLAST of Spg033344 vs. NCBI nr
Match: XP_023539336.1 (uncharacterized protein LOC111799999 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 439.5 bits (1129), Expect = 1.9e-119
Identity = 216/265 (81.51%), Postives = 232/265 (87.55%), Query Frame = 0

Query: 1   MALHTSNLCCNVSTASGYVTFIGNRKSVRCFQSFEVFRHVPLAFPKKFDIGLVKASRGG- 60
           MALHTS+LCCN     GYVTFI NRKSVRC QS EVF HVP A PK++DIGLVKAS GG 
Sbjct: 8   MALHTSSLCCN-----GYVTFISNRKSVRCSQSCEVFHHVPSARPKQYDIGLVKASTGGC 67

Query: 61  --------------YGNFRPCKQTSRMLSFQTCRLKAENSSGESVTLDAKTLEQDLQNAI 120
                          GNFRPCK ++RMLSF+ C+LKAENSSGES+TLDA+TL+QDLQNAI
Sbjct: 68  GFLFPSIPRCLGSTIGNFRPCKLSTRMLSFRPCQLKAENSSGESITLDAETLKQDLQNAI 127

Query: 121 ADEDYARAAQIRDTLKALQEDSKTSVLAANAKFYEAFRTGDLAAMQTLWARGDSVCCVHP 180
           ADEDYARAA+IRDTLKALQEDSK SV AANAKFYE+FR GDLAAMQTLWARGDSVCCVHP
Sbjct: 128 ADEDYARAAEIRDTLKALQEDSKASVFAANAKFYESFRNGDLAAMQTLWARGDSVCCVHP 187

Query: 181 GMRGISGYDDVMTSWEYVWANYEFPLEIQLKDVQVHARGEVGYVTCVELVKTKGSSWGGQ 240
           GMRGISGYD+V+TSWEYVWANYEFPLEIQLKDV+VHARG+VGYVTCVELVKTKGSSWGGQ
Sbjct: 188 GMRGISGYDNVITSWEYVWANYEFPLEIQLKDVEVHARGDVGYVTCVELVKTKGSSWGGQ 247

Query: 241 FVTNVFERINGQWFICIHHASPIDL 251
           FVTNVFERINGQWFICIHHASPIDL
Sbjct: 248 FVTNVFERINGQWFICIHHASPIDL 267

BLAST of Spg033344 vs. ExPASy Swiss-Prot
Match: Q93YV9 (F-box protein SKIP8 OS=Arabidopsis thaliana OX=3702 GN=SKIP8 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.8e-12
Identity = 37/117 (31.62%), Postives = 61/117 (52.14%), Query Frame = 0

Query: 130 SVLAANAKFYEAFRTGDLAAMQTLWARGDSVCCVHPGMRGISGYDDVMTSWEYVWANYEF 189
           ++++ N +F+   R   L AM  LW   D V C+H      SGY++V+ SW+  + N+E 
Sbjct: 107 AIISVNTEFFTIIRDRALQAMARLWLNSDYVKCIHASGELFSGYNEVIQSWQLCF-NWEQ 166

Query: 190 PLEIQLKDVQVHARGEVGYVTCVELVKTKGSSWGGQFVTNVFERINGQWFICIHHAS 247
             + Q+  V+     ++ +VT    +   G   G   +TNVFE  NG+W +  HH+S
Sbjct: 167 GFDFQVHTVRTRILTDMAWVTMKAYLNVDG---GPFLITNVFEFHNGRWHMVHHHSS 219

BLAST of Spg033344 vs. ExPASy TrEMBL
Match: A0A6J1FUV2 (uncharacterized protein LOC111447066 OS=Cucurbita moschata OX=3662 GN=LOC111447066 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 3.8e-121
Identity = 218/265 (82.26%), Postives = 233/265 (87.92%), Query Frame = 0

Query: 1   MALHTSNLCCNVSTASGYVTFIGNRKSVRCFQSFEVFRHVPLAFPKKFDIGLVKASRGGY 60
           MALHTS+LCCN     GYVTFI NRKSVRC QS EVF HVP A PK++DIGLVKAS GGY
Sbjct: 8   MALHTSSLCCN-----GYVTFISNRKSVRCSQSCEVFYHVPSALPKQYDIGLVKASIGGY 67

Query: 61  ---------------GNFRPCKQTSRMLSFQTCRLKAENSSGESVTLDAKTLEQDLQNAI 120
                          GNFRPCKQ+SRMLSF+ C+LKAENSSGES+TLDA+ L+QDLQNAI
Sbjct: 68  GFVSPSIPRCLGSTIGNFRPCKQSSRMLSFRPCQLKAENSSGESITLDAEALKQDLQNAI 127

Query: 121 ADEDYARAAQIRDTLKALQEDSKTSVLAANAKFYEAFRTGDLAAMQTLWARGDSVCCVHP 180
           ADEDYARAA+IRDTLKALQEDSK SV AANAKFYE+FR GDLAAMQTLWARGDSVCCVHP
Sbjct: 128 ADEDYARAAEIRDTLKALQEDSKASVFAANAKFYESFRNGDLAAMQTLWARGDSVCCVHP 187

Query: 181 GMRGISGYDDVMTSWEYVWANYEFPLEIQLKDVQVHARGEVGYVTCVELVKTKGSSWGGQ 240
           GMRGISGYD+V+TSWEYVWANYEFPLEIQLKDV+VHARG+VGYVTCVELVKTKGSSWGGQ
Sbjct: 188 GMRGISGYDNVITSWEYVWANYEFPLEIQLKDVEVHARGDVGYVTCVELVKTKGSSWGGQ 247

Query: 241 FVTNVFERINGQWFICIHHASPIDL 251
           FVTNVFERINGQWFICIHHASPIDL
Sbjct: 248 FVTNVFERINGQWFICIHHASPIDL 267

BLAST of Spg033344 vs. ExPASy TrEMBL
Match: A0A6J1I6J4 (uncharacterized protein LOC111470086 OS=Cucurbita maxima OX=3661 GN=LOC111470086 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 3.2e-120
Identity = 215/265 (81.13%), Postives = 231/265 (87.17%), Query Frame = 0

Query: 1   MALHTSNLCCNVSTASGYVTFIGNRKSVRCFQSFEVFRHVPLAFPKKFDIGLVKASRGGY 60
           MALHTS+LCCN     GYVTFI NRK+VRC QS EVF HVP A PK++DIG VK S GGY
Sbjct: 1   MALHTSSLCCN-----GYVTFISNRKNVRCSQSCEVFHHVPSALPKQYDIGFVKESTGGY 60

Query: 61  ---------------GNFRPCKQTSRMLSFQTCRLKAENSSGESVTLDAKTLEQDLQNAI 120
                          GNFRPCKQ++RMLSF+ C+LKAENSSGES+TLDA+TL+QDLQNAI
Sbjct: 61  GFLFPSIPRCLGSTIGNFRPCKQSTRMLSFRPCQLKAENSSGESITLDAETLKQDLQNAI 120

Query: 121 ADEDYARAAQIRDTLKALQEDSKTSVLAANAKFYEAFRTGDLAAMQTLWARGDSVCCVHP 180
           ADEDYARAA+IRDTLKALQEDSK SV AANAKFYE+FR GDLAAMQTLWARGDSVCCVHP
Sbjct: 121 ADEDYARAAEIRDTLKALQEDSKASVFAANAKFYESFRNGDLAAMQTLWARGDSVCCVHP 180

Query: 181 GMRGISGYDDVMTSWEYVWANYEFPLEIQLKDVQVHARGEVGYVTCVELVKTKGSSWGGQ 240
           GMRGI GYD+VMTSWEYVWANYEFPLEIQLKDV+VHARG+VGYVTCVELVKTKGSSWGGQ
Sbjct: 181 GMRGILGYDNVMTSWEYVWANYEFPLEIQLKDVEVHARGDVGYVTCVELVKTKGSSWGGQ 240

Query: 241 FVTNVFERINGQWFICIHHASPIDL 251
           FVTNVFERINGQWFICIHHASPIDL
Sbjct: 241 FVTNVFERINGQWFICIHHASPIDL 260

BLAST of Spg033344 vs. ExPASy TrEMBL
Match: A0A0A0LA11 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733200 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 3.9e-118
Identity = 214/265 (80.75%), Postives = 228/265 (86.04%), Query Frame = 0

Query: 1   MALHTSNLCCNVSTASGYVTFIGNRKSVRCFQSFEVFRHVPLAFPKKFDIGLVKASRGG- 60
           MALHT NLCCN      YVTFI +RKSVRC QSF VF HVP AFPK+ +I LV +S GG 
Sbjct: 1   MALHTFNLCCN-----DYVTFISSRKSVRCSQSFSVFHHVPSAFPKQCEIRLVNSSSGGS 60

Query: 61  --------------YGNFRPCKQTSRMLSFQTCRLKAENSSGESVTLDAKTLEQDLQNAI 120
                          GNFRPCKQ SR LSF+ C+LKAENSSGES+TLDA+TLEQDLQNAI
Sbjct: 61  GFLLPSNFRHVGSRNGNFRPCKQASRKLSFRPCQLKAENSSGESITLDAETLEQDLQNAI 120

Query: 121 ADEDYARAAQIRDTLKALQEDSKTSVLAANAKFYEAFRTGDLAAMQTLWARGDSVCCVHP 180
           ADEDYARAA+IRDTLKALQEDSKT VL ANAKFYE+FRTGDLAAMQTLWARG+SVCCVHP
Sbjct: 121 ADEDYARAAEIRDTLKALQEDSKTLVLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHP 180

Query: 181 GMRGISGYDDVMTSWEYVWANYEFPLEIQLKDVQVHARGEVGYVTCVELVKTKGSSWGGQ 240
           GMRGISGYDDV+TSWEYVWANYEFPLEIQLKD+QVHARG+VGYVTCVELVKTKGSSWGGQ
Sbjct: 181 GMRGISGYDDVITSWEYVWANYEFPLEIQLKDIQVHARGDVGYVTCVELVKTKGSSWGGQ 240

Query: 241 FVTNVFERINGQWFICIHHASPIDL 251
           FVTNVFERINGQWFICIHHASPIDL
Sbjct: 241 FVTNVFERINGQWFICIHHASPIDL 260

BLAST of Spg033344 vs. ExPASy TrEMBL
Match: A0A5A7TRW4 (F-box protein SKIP8 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G004880 PE=4 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 4.1e-115
Identity = 212/265 (80.00%), Postives = 225/265 (84.91%), Query Frame = 0

Query: 1   MALHTSNLCCNVSTASGYVTFIGNRKSVRCFQSFEVFRHVPLAFPKKFDIGLVKASRGGY 60
           MAL TSNLCCN      YVTFI N KSVRC QSF VF HVP A PK+ +I LVK+S GG 
Sbjct: 1   MALRTSNLCCN-----DYVTFISNWKSVRCSQSFSVFHHVPSALPKQCEIRLVKSSNGGS 60

Query: 61  ---------------GNFRPCKQTSRMLSFQTCRLKAENSSGESVTLDAKTLEQDLQNAI 120
                          GNFRPCKQ SR LSF   +LKAENSSGES+TLDA+TLEQDLQNAI
Sbjct: 61  GFLLPTNLRHVVSRDGNFRPCKQASRKLSFGPYQLKAENSSGESITLDAETLEQDLQNAI 120

Query: 121 ADEDYARAAQIRDTLKALQEDSKTSVLAANAKFYEAFRTGDLAAMQTLWARGDSVCCVHP 180
           A+EDYARAA+IRDTLKALQEDSKT VL ANAKFYE+FRTGDLAAMQTLWARG+SVCCVHP
Sbjct: 121 ANEDYARAAEIRDTLKALQEDSKTLVLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHP 180

Query: 181 GMRGISGYDDVMTSWEYVWANYEFPLEIQLKDVQVHARGEVGYVTCVELVKTKGSSWGGQ 240
           GMRGISGYDDV+TSWEYVWANYEFPLEIQLKD+QVHARG+VGYVTCVELVKTKGSSWGGQ
Sbjct: 181 GMRGISGYDDVITSWEYVWANYEFPLEIQLKDMQVHARGDVGYVTCVELVKTKGSSWGGQ 240

Query: 241 FVTNVFERINGQWFICIHHASPIDL 251
           FVTNVFERINGQWFICIHHASPIDL
Sbjct: 241 FVTNVFERINGQWFICIHHASPIDL 260

BLAST of Spg033344 vs. ExPASy TrEMBL
Match: A0A1S3B5S8 (uncharacterized protein LOC103486341 OS=Cucumis melo OX=3656 GN=LOC103486341 PE=4 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 4.1e-115
Identity = 212/265 (80.00%), Postives = 225/265 (84.91%), Query Frame = 0

Query: 1   MALHTSNLCCNVSTASGYVTFIGNRKSVRCFQSFEVFRHVPLAFPKKFDIGLVKASRGGY 60
           MAL TSNLCCN      YVTFI N KSVRC QSF VF HVP A PK+ +I LVK+S GG 
Sbjct: 1   MALRTSNLCCN-----DYVTFISNWKSVRCSQSFSVFHHVPSALPKQCEIRLVKSSNGGS 60

Query: 61  ---------------GNFRPCKQTSRMLSFQTCRLKAENSSGESVTLDAKTLEQDLQNAI 120
                          GNFRPCKQ SR LSF   +LKAENSSGES+TLDA+TLEQDLQNAI
Sbjct: 61  GFLLPTNLRHVVSRDGNFRPCKQASRKLSFGPYQLKAENSSGESITLDAETLEQDLQNAI 120

Query: 121 ADEDYARAAQIRDTLKALQEDSKTSVLAANAKFYEAFRTGDLAAMQTLWARGDSVCCVHP 180
           A+EDYARAA+IRDTLKALQEDSKT VL ANAKFYE+FRTGDLAAMQTLWARG+SVCCVHP
Sbjct: 121 ANEDYARAAEIRDTLKALQEDSKTLVLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHP 180

Query: 181 GMRGISGYDDVMTSWEYVWANYEFPLEIQLKDVQVHARGEVGYVTCVELVKTKGSSWGGQ 240
           GMRGISGYDDV+TSWEYVWANYEFPLEIQLKD+QVHARG+VGYVTCVELVKTKGSSWGGQ
Sbjct: 181 GMRGISGYDDVITSWEYVWANYEFPLEIQLKDMQVHARGDVGYVTCVELVKTKGSSWGGQ 240

Query: 241 FVTNVFERINGQWFICIHHASPIDL 251
           FVTNVFERINGQWFICIHHASPIDL
Sbjct: 241 FVTNVFERINGQWFICIHHASPIDL 260

BLAST of Spg033344 vs. TAIR 10
Match: AT3G09250.1 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 262.7 bits (670), Expect = 3.0e-70
Identity = 137/256 (53.52%), Postives = 178/256 (69.53%), Query Frame = 0

Query: 1   MALHTSNLCCNVSTASGYVTFIGNRKSVRCFQSFEVFRHVPLAFPKKFDIGLVKASRGGY 60
           MALH S + C VS      +  G   S+R         H+P ++P      +V AS   +
Sbjct: 1   MALHGSGVFCKVSNMVEITSPFGG--SMRLL-------HLPKSYP--IHCNMVSAS-NTF 60

Query: 61  GNFRPCKQTSRMLS-FQTCRLKAENSSG----ESVTLDAKTLEQDLQNAIADEDYARAAQ 120
           G+     Q     S  + CR+K E ++     ES+++D  TL+QDL+ A+ +E+Y  AA+
Sbjct: 61  GSAHLKLQNKEPCSRLRPCRVKREENNQTADVESISMDENTLKQDLETAVQEENYVEAAK 120

Query: 121 IRDTLKALQEDSKTSVLAANAKFYEAFRTGDLAAMQTLWARGDSVCCVHPGMRGISGYDD 180
           IRD LK LQED+K SVL+AN++FY++FR GDLAAMQ+LW++  + CCVHPG +GI+GYD 
Sbjct: 121 IRDKLKELQEDNKASVLSANSRFYQSFRNGDLAAMQSLWSKSGNPCCVHPGAKGITGYDY 180

Query: 181 VMTSWEYVWANYEFPLEIQLKDVQVHARGEVGYVTCVELVKTKG-SSWGGQFVTNVFERI 240
           VM SWE VW NYEFPL I+LKDV+VH RGEVGYVTC+E VKTKG SSWG QFV+NVFERI
Sbjct: 181 VMESWELVWMNYEFPLLIELKDVEVHVRGEVGYVTCMEFVKTKGSSSWGAQFVSNVFERI 240

Query: 241 NGQWFICIHHASPIDL 251
           +GQWFICIHHASP+D+
Sbjct: 241 DGQWFICIHHASPVDI 244

BLAST of Spg033344 vs. TAIR 10
Match: AT3G09250.2 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 232.3 bits (591), Expect = 4.4e-61
Identity = 116/206 (56.31%), Postives = 152/206 (73.79%), Query Frame = 0

Query: 39  HVPLAFPKKFDIGLVKASRGGYGNFRPCKQTSRMLS-FQTCRLKAENSSG----ESVTLD 98
           H+P ++P      +V AS   +G+     Q     S  + CR+K E ++     ES+++D
Sbjct: 16  HLPKSYP--IHCNMVSAS-NTFGSAHLKLQNKEPCSRLRPCRVKREENNQTADVESISMD 75

Query: 99  AKTLEQDLQNAIADEDYARAAQIRDTLKALQEDSKTSVLAANAKFYEAFRTGDLAAMQTL 158
             TL+QDL+ A+ +E+Y  AA+IRD LK LQED+K SVL+AN++FY++FR GDLAAMQ+L
Sbjct: 76  ENTLKQDLETAVQEENYVEAAKIRDKLKELQEDNKASVLSANSRFYQSFRNGDLAAMQSL 135

Query: 159 WARGDSVCCVHPGMRGISGYDDVMTSWEYVWANYEFPLEIQLKDVQVHARGEVGYVTCVE 218
           W++  + CCVHPG +GI+GYD VM SWE VW NYEFPL I+LKDV+VH RGEVGYVTC+E
Sbjct: 136 WSKSGNPCCVHPGAKGITGYDYVMESWELVWMNYEFPLLIELKDVEVHVRGEVGYVTCME 195

Query: 219 LVKTKG-SSWGGQFVTNVFERINGQW 239
            VKTKG SSWG QFV+NVFERI+GQW
Sbjct: 196 FVKTKGSSSWGAQFVSNVFERIDGQW 218

BLAST of Spg033344 vs. TAIR 10
Match: AT4G10925.1 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 73.2 bits (178), Expect = 3.4e-13
Identity = 37/117 (31.62%), Postives = 61/117 (52.14%), Query Frame = 0

Query: 130 SVLAANAKFYEAFRTGDLAAMQTLWARGDSVCCVHPGMRGISGYDDVMTSWEYVWANYEF 189
           ++++ N +F+   R   L AM  LW   D V C+H      SGY++V+ SW+  + N+E 
Sbjct: 107 AIISVNTEFFTIIRDRALQAMARLWLNSDYVKCIHASGELFSGYNEVIQSWQLCF-NWEQ 166

Query: 190 PLEIQLKDVQVHARGEVGYVTCVELVKTKGSSWGGQFVTNVFERINGQWFICIHHAS 247
             + Q+  V+     ++ +VT    +   G   G   +TNVFE  NG+W +  HH+S
Sbjct: 167 GFDFQVHTVRTRILTDMAWVTMKAYLNVDG---GPFLITNVFEFHNGRWHMVHHHSS 219

BLAST of Spg033344 vs. TAIR 10
Match: AT4G10925.2 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 73.2 bits (178), Expect = 3.4e-13
Identity = 37/117 (31.62%), Postives = 61/117 (52.14%), Query Frame = 0

Query: 130 SVLAANAKFYEAFRTGDLAAMQTLWARGDSVCCVHPGMRGISGYDDVMTSWEYVWANYEF 189
           ++++ N +F+   R   L AM  LW   D V C+H      SGY++V+ SW+  + N+E 
Sbjct: 107 AIISVNTEFFTIIRDRALQAMARLWLNSDYVKCIHASGELFSGYNEVIQSWQLCF-NWEQ 166

Query: 190 PLEIQLKDVQVHARGEVGYVTCVELVKTKGSSWGGQFVTNVFERINGQWFICIHHAS 247
             + Q+  V+     ++ +VT    +   G   G   +TNVFE  NG+W +  HH+S
Sbjct: 167 GFDFQVHTVRTRILTDMAWVTMKAYLNVDG---GPFLITNVFEFHNGRWHMVHHHSS 219

BLAST of Spg033344 vs. TAIR 10
Match: AT4G10925.3 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 73.2 bits (178), Expect = 3.4e-13
Identity = 37/117 (31.62%), Postives = 61/117 (52.14%), Query Frame = 0

Query: 130 SVLAANAKFYEAFRTGDLAAMQTLWARGDSVCCVHPGMRGISGYDDVMTSWEYVWANYEF 189
           ++++ N +F+   R   L AM  LW   D V C+H      SGY++V+ SW+  + N+E 
Sbjct: 107 AIISVNTEFFTIIRDRALQAMARLWLNSDYVKCIHASGELFSGYNEVIQSWQLCF-NWEQ 166

Query: 190 PLEIQLKDVQVHARGEVGYVTCVELVKTKGSSWGGQFVTNVFERINGQWFICIHHAS 247
             + Q+  V+     ++ +VT    +   G   G   +TNVFE  NG+W +  HH+S
Sbjct: 167 GFDFQVHTVRTRILTDMAWVTMKAYLNVDG---GPFLITNVFEFHNGRWHMVHHHSS 219

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6596375.15.4e-12282.64F-box protein SKIP8, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG7027924.12.1e-12182.26F-box protein SKIP8 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022941815.17.9e-12182.26uncharacterized protein LOC111447066 [Cucurbita moschata][more]
XP_022971333.16.7e-12081.13uncharacterized protein LOC111470086 [Cucurbita maxima][more]
XP_023539336.11.9e-11981.51uncharacterized protein LOC111799999 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Q93YV94.8e-1231.62F-box protein SKIP8 OS=Arabidopsis thaliana OX=3702 GN=SKIP8 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1FUV23.8e-12182.26uncharacterized protein LOC111447066 OS=Cucurbita moschata OX=3662 GN=LOC1114470... [more]
A0A6J1I6J43.2e-12081.13uncharacterized protein LOC111470086 OS=Cucurbita maxima OX=3661 GN=LOC111470086... [more]
A0A0A0LA113.9e-11880.75Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733200 PE=4 SV=1[more]
A0A5A7TRW44.1e-11580.00F-box protein SKIP8 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G... [more]
A0A1S3B5S84.1e-11580.00uncharacterized protein LOC103486341 OS=Cucumis melo OX=3656 GN=LOC103486341 PE=... [more]
Match NameE-valueIdentityDescription
AT3G09250.13.0e-7053.52Nuclear transport factor 2 (NTF2) family protein [more]
AT3G09250.24.4e-6156.31Nuclear transport factor 2 (NTF2) family protein [more]
AT4G10925.13.4e-1331.62Nuclear transport factor 2 (NTF2) family protein [more]
AT4G10925.23.4e-1331.62Nuclear transport factor 2 (NTF2) family protein [more]
AT4G10925.33.4e-1331.62Nuclear transport factor 2 (NTF2) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.50coord: 120..249
e-value: 4.9E-43
score: 148.6
NoneNo IPR availablePANTHERPTHR34957NUCLEAR TRANSPORT FACTOR 2 (NTF2) FAMILY PROTEINcoord: 61..249
IPR001943UVR domainPFAMPF02151UVRcoord: 95..125
e-value: 6.6E-7
score: 28.9
IPR001943UVR domainPROSITEPS50151UVRcoord: 91..126
score: 8.391188
IPR037401SnoaL-like domainPFAMPF13474SnoaL_3coord: 131..247
e-value: 8.9E-25
score: 87.4
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 126..248

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg033344.1Spg033344.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding