Spg033210 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg033210
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	DNA-binding protein S1FA-like
Location	scaffold5: 2577062 .. 2579880 (-)
RNA-Seq Expression	Spg033210
Synteny	Spg033210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACCGATTAAACAACTAACAACATTATACATACGAGAGCCAAAACGATTGTCTAAAAAATTAAAGAAAATGGAAGGACCAAAATAAAATAACCCTAAAAATTCAGTGACTAGAAATTAAAGCTAAAATAAGACTTGAAACTAAATTTAAAATATGAATATTCTAAAAATAAAATAAAAAATACTACGAGCGTACACGAGCCCATTACGATGAAAAGAACGGCCCATAGAAAGCGCAGGACTCGGCTGGACCAAATCGCCGATTTATATGAATCTTTCCATTTTTCTTAGATCTCGCTCGCTGACATTTTTTCCGTCAACGCTTCACCGCCGATCCGATCCGATCCGTACAATTGCCTATATTCTGGATCTTCCTGCCGGCCGATCTATCCGGCTCTGAGTCGTAGTCATGGCTTCAGCCAATGGCAAGGTACGGTTGTCGAAGGAATCCCCCTTTGTTTCTTGCTTTTTCCGTTCAATTTCACGAGATCTGTGCTTTTTGGATTCCATTTTTGATTCTGTGTTCGAATGCCTTTTTCCTTCAATTTGGTTGTTTGGATCGATCTGGGTGCGTTGGGAATCGTCTTTTGTTCTTTTCTGAAAGCTCGATTTCATCTGGTTGGGCGGTGATTTGATTAGCGAGTGCTGGTTCGGATCGGAATTTTGTTTTGGGTTTTTTTGGCTGGGATTCTACGGGCGGGAAATTGAGCTTCTGATTGTTTGGCGCACGCATTGTAGGACCTGTAAATCTTGGTTCTAGAGATGGAATTTGTCTCTGGGGGGAAAATTTGGGGATGGATGAGCCGTACTGGCGAATTGTCGTTTAGAATTGGGGAAAATTTTAGGGATAGATGAACCGTACAGGCGAGTTGTCGTTTCAAATTGGGGAATTTCGAGTGGATGGGTTGTGAATGTGTGATCAGACTGCTTTGCAATATCGGCATTCATCATTGAAGTTTGGATGATATTTGAAATTATTATTTGTTTTGTGGAGAACTAATTTAAGATCAAAAGTGGGCTAGGTTTAAGAAAAATGATGAGAGTGAGAGAGGCCATTTTGGTTTATGCCTTAGAGTTCAATTAAGATAACTTTGTACAGAACTCCCTATGATTAGTTGAATTGTGATTTCTCATTATTAGAAGTGAATCTCCATTTCTGAAAGCGTCTAATTAGAAATTCCCTGATGAGATCTAAGTATAATTTAGATCATCCATTACTTTTGAAAAATATGTCATGATGGGTCTTGTTTATTGAAAACATCAACTTTGATTTTTTGGCTCATTGGTGATGGTTTATTAATTGTTGTTCTGCAAGTGAACAGGGAAATGTGATCAATGATGTTGAAGCAAAAGGATTCAATCCAGGGCTAATAGTGCTTCTGCTTGTTGGTGGGTTGCTGCTGATTTTCCTCGTAGGGAACTATGCACTTTACTTGTATGCACAGAAGAATCTCCCTCCCAAGAAGAAAAAGCCAGTATCTAAAAAGAAGATGAAGAGGGAAAGACTGAAGCAAGGAGTGTCTGCACCTGGAGAGTAAAAAAATATTTAACTTCCCGAGGTTTCCTTCTCTGTAGAACGTTTTGATTTTCAAAAATTTTCCTACATAGACTGCCTAGAAAGTTGTTACAGTTATTTCTTTTATCTACTGCCTTTAACTCTTCAGAAATCGAACTTGATTGTGAGTTTTTAACTCATATTTACATGGGCACTTTTCTCAAGGTTCCATTGACTCTTTACTACTTATTCCCCTCTTTTTGGTACACACCAGAAAGATTTTTGTTTCTCCATCTTTAAACAGCCTTAACTCAGTCCTTTTTACTATTAGAATCTTTTCTCTTTTTTTTTTTTTGCTTTTGATCTTTCAATAAATGGTGGGGTTAGATTGTAGACTCTATAGAGAGAGAGAAAGAGAGATTGCATGGCTGAGTGGTGGATTTGTGTAACTCTCTGTTAAGAAGATTACAAGACACTCTTTTCAACAGAAAGACACTCATAAATTTGTCACAAGGAACATGTAGTCAACTAAGGAAAAGACATGTTCTTCAAGGGTCCATTACTTATTTGATTCACGTGGAACACTAGAGAGAGAACATTGAAGCCCAGAAAAGCTTACCTTTTACTGAAGCAAGCAAGTCATCTTGTCCCCTTCTGCGTTTTTATGGGATTCATTGTTTTCAAGTCTCGATCAACATAATTGCGGATTCTGTCCCAACAGGCAATGCTGATATAAAACACTCAGCTTTTAGACTTTTGCTATTTTTTGTGTTGGCTTGTTCTATCTCAGTTGCTTGCTTTGCCATACTCCCACAGGCAAGTCAGTGGCTTTTGATATGGGCAAAAGCAGCCCATTTTGCTTTTAACATTACCTGTGGTAAAGCCACAGTGTGTACCTGATCTCTGTAAACTTAGGTTGTGTGTATTTGTTTTTGTTGGAGAATGTTAGATGGGCAACTAAATTCTCCACTTTGTTTTATGTATTGTATATATCGTCATTGTCTTGTTTAAGTTGTATTGAGATGTCAGGTTGAGCTATTATGAGCATAGCTCAACGGGTGAAGAGATATATTATCGACCAAGAATTTTGAGGTGCAAATCTTCACTCCACATGTTAAACTAAAAAAAAATCATATTAAGATAATTAATGTTGTCTCAGGAGCAACTTGCTTATGAATAAATGGCTTCTTTTTAGATGTTGGTATGAGTATGATCCATTATTTTAATGGGTTGAATCGTAGGAGCTAGAAATTCGAAATCTTCCCTTCTAACCTTTTTTTTTTTTTTTATACATATAAATATAAATTTTCAAATTTAAGAATTTAG

mRNA sequence

ATGGATGAGCCGTACTGGCGAATTGTCGGAAATGTGATCAATGATGTTGAAGCAAAAGGATTCAATCCAGGGCTAATAGTGCTTCTGCTTGTTGGTGGGTTGCTGCTGATTTTCCTCGTAGGGAACTATGCACTTTACTTGTATGCACAGAAGAATCTCCCTCCCAAGAAGAAAAAGCCAGTATCTAAAAAGAAGATGAAGAGGGAAAGACTGAAGCAAGGAGTGTCTGCACCTGGAGAGTAA

Coding sequence (CDS)

ATGGATGAGCCGTACTGGCGAATTGTCGGAAATGTGATCAATGATGTTGAAGCAAAAGGATTCAATCCAGGGCTAATAGTGCTTCTGCTTGTTGGTGGGTTGCTGCTGATTTTCCTCGTAGGGAACTATGCACTTTACTTGTATGCACAGAAGAATCTCCCTCCCAAGAAGAAAAAGCCAGTATCTAAAAAGAAGATGAAGAGGGAAAGACTGAAGCAAGGAGTGTCTGCACCTGGAGAGTAA

Protein sequence

MDEPYWRIVGNVINDVEAKGFNPGLIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRERLKQGVSAPGE

Homology

[Close]

BLAST of Spg033210 vs. NCBI nr
Match: XP_022145490.1 (DNA-binding protein S1FA-like [Momordica charantia])

HSP 1 Score: 133.3 bits (334), Expect = 9.5e-28
Identity = 69/71 (97.18%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 10 GNVINDVEAKGFNPGLIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRE 69
          GNVINDVEAKGFNPGLIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKM++E
Sbjct: 8  GNVINDVEAKGFNPGLIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMRKE 67

Query: 70 RLKQGVSAPGE 81
          RLKQGVSAPGE
Sbjct: 68 RLKQGVSAPGE 78

[Close]

BLAST of Spg033210 vs. NCBI nr
Match: XP_038905724.1 (DNA-binding protein S1FA-like [Benincasa hispida])

HSP 1 Score: 133.3 bits (334), Expect = 9.5e-28
Identity = 70/71 (98.59%), Postives = 70/71 (98.59%), Query Frame = 0


Query: 10 GNVINDVEAKGFNPGLIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRE 69
          GNVINDVEAKGFNP LIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRE
Sbjct: 8  GNVINDVEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRE 67

Query: 70 RLKQGVSAPGE 81
          RLKQGVSAPGE
Sbjct: 68 RLKQGVSAPGE 78

[Close]

BLAST of Spg033210 vs. NCBI nr
Match: KAE8651038.1 (hypothetical protein Csa_000825 [Cucumis sativus])

HSP 1 Score: 132.9 bits (333), Expect = 1.2e-27
Identity = 69/71 (97.18%), Postives = 70/71 (98.59%), Query Frame = 0


Query: 10  GNVINDVEAKGFNPGLIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRE 69
           GNVIND+EAKGFNP LIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRE
Sbjct: 826 GNVINDIEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRE 885

Query: 70  RLKQGVSAPGE 81
           RLKQGVSAPGE
Sbjct: 886 RLKQGVSAPGE 896

[Close]

BLAST of Spg033210 vs. NCBI nr
Match: XP_004137812.1 (DNA-binding protein S1FA [Cucumis sativus])

HSP 1 Score: 132.9 bits (333), Expect = 1.2e-27
Identity = 69/71 (97.18%), Postives = 70/71 (98.59%), Query Frame = 0


Query: 10 GNVINDVEAKGFNPGLIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRE 69
          GNVIND+EAKGFNP LIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRE
Sbjct: 8  GNVINDIEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRE 67

Query: 70 RLKQGVSAPGE 81
          RLKQGVSAPGE
Sbjct: 68 RLKQGVSAPGE 78

[Close]

BLAST of Spg033210 vs. NCBI nr
Match: XP_008442666.1 (PREDICTED: DNA-binding protein S1FA-like [Cucumis melo])

HSP 1 Score: 131.3 bits (329), Expect = 3.6e-27
Identity = 69/71 (97.18%), Postives = 69/71 (97.18%), Query Frame = 0


Query: 10 GNVINDVEAKGFNPGLIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRE 69
          GNVINDVEAKGFNP LIVLLLVGGLLL FLVGNYALYLYAQKNLPPKKKKPVSKKKMKRE
Sbjct: 8  GNVINDVEAKGFNPALIVLLLVGGLLLTFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRE 67

Query: 70 RLKQGVSAPGE 81
          RLKQGVSAPGE
Sbjct: 68 RLKQGVSAPGE 78

[Close]

BLAST of Spg033210 vs. ExPASy Swiss-Prot
Match: P42552 (DNA-binding protein S1FA OS=Spinacia oleracea OX=3562 GN=S1FA PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 1.7e-24
Identity = 56/68 (82.35%), Postives = 63/68 (92.65%), Query Frame = 0


Query: 13 INDVEAKGFNPGLIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRERLK 72
          +N+VEAKG NPGLIVLL++GGLLL FLVGN+ LY YAQKNLPPKKKKP+SKKKMKRERLK
Sbjct: 3  VNEVEAKGLNPGLIVLLVIGGLLLTFLVGNFILYTYAQKNLPPKKKKPISKKKMKRERLK 62

Query: 73 QGVSAPGE 81
          QGV+ PGE
Sbjct: 63 QGVAPPGE 70

[Close]

BLAST of Spg033210 vs. ExPASy Swiss-Prot
Match: Q93VI0 (DNA-binding protein S1FA3 OS=Arabidopsis thaliana OX=3702 GN=S1FA3 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.8e-21
Identity = 50/65 (76.92%), Postives = 59/65 (90.77%), Query Frame = 0


Query: 16 VEAKGFNPGLIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRERLKQGV 75
          +E+KG NPGLIVLL++GGLLL FLVGN+ LY YAQKNLPP+KKKPVSKKKMK+E++KQGV
Sbjct: 9  IESKGLNPGLIVLLVIGGLLLTFLVGNFILYTYAQKNLPPRKKKPVSKKKMKKEKMKQGV 68

Query: 76 SAPGE 81
            PGE
Sbjct: 69 QVPGE 73

[Close]

BLAST of Spg033210 vs. ExPASy Swiss-Prot
Match: P42551 (DNA-binding protein S1FA1 OS=Arabidopsis thaliana OX=3702 GN=S1FA1 PE=3 SV=2)

HSP 1 Score: 102.4 bits (254), Expect = 2.4e-21
Identity = 51/64 (79.69%), Postives = 58/64 (90.62%), Query Frame = 0


Query: 17 EAKGFNPGLIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRERLKQGVS 76
          EAKG NPGLIVLL+VGG LL+FL+ NY LY+YAQKNLPP+KKKPVSKKK+KRE+LKQGV 
Sbjct: 13 EAKGLNPGLIVLLVVGGPLLVFLIANYVLYVYAQKNLPPRKKKPVSKKKLKREKLKQGVP 72

Query: 77 APGE 81
           PGE
Sbjct: 73 VPGE 76

[Close]

BLAST of Spg033210 vs. ExPASy Swiss-Prot
Match: Q42337 (DNA-binding protein S1FA2 OS=Arabidopsis thaliana OX=3702 GN=S1FA2 PE=3 SV=2)

HSP 1 Score: 102.1 bits (253), Expect = 3.1e-21
Identity = 49/65 (75.38%), Postives = 59/65 (90.77%), Query Frame = 0


Query: 16 VEAKGFNPGLIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRERLKQGV 75
          VEAKG NPGLIVLL++GGLL+ FL+ NY +Y+YAQKNLPP+KKKP+SKKK+KRE+LKQGV
Sbjct: 12 VEAKGLNPGLIVLLVIGGLLVTFLIANYVMYMYAQKNLPPRKKKPLSKKKLKREKLKQGV 71

Query: 76 SAPGE 81
            PGE
Sbjct: 72 PVPGE 76

[Close]

BLAST of Spg033210 vs. ExPASy Swiss-Prot
Match: Q7XLX6 (DNA-binding protein S1FA2 OS=Oryza sativa subsp. japonica OX=39947 GN=S1FA2 PE=3 SV=2)

HSP 1 Score: 100.5 bits (249), Expect = 9.0e-21
Identity = 51/70 (72.86%), Postives = 60/70 (85.71%), Query Frame = 0


Query: 11 NVINDVEAKGFNPGLIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRER 70
          NV+ +   KG NPG+IVL++V   LL+F VGNYALY+YAQK LPP+KKKPVSKKKMKRE+
Sbjct: 11 NVVIEEVNKGLNPGMIVLIVVATFLLLFFVGNYALYVYAQKTLPPRKKKPVSKKKMKREK 70

Query: 71 LKQGVSAPGE 81
          LKQGVSAPGE
Sbjct: 71 LKQGVSAPGE 80

[Close]

BLAST of Spg033210 vs. ExPASy TrEMBL
Match: A0A6J1CUM0 (DNA-binding protein S1FA-like OS=Momordica charantia OX=3673 GN=LOC111014929 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 4.6e-28
Identity = 69/71 (97.18%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 10 GNVINDVEAKGFNPGLIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRE 69
          GNVINDVEAKGFNPGLIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKM++E
Sbjct: 8  GNVINDVEAKGFNPGLIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMRKE 67

Query: 70 RLKQGVSAPGE 81
          RLKQGVSAPGE
Sbjct: 68 RLKQGVSAPGE 78

[Close]

BLAST of Spg033210 vs. ExPASy TrEMBL
Match: A0A0A0LAW3 (DNA-binding protein S1FA OS=Cucumis sativus OX=3659 GN=Csa_3G736950 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 6.0e-28
Identity = 69/71 (97.18%), Postives = 70/71 (98.59%), Query Frame = 0


Query: 10 GNVINDVEAKGFNPGLIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRE 69
          GNVIND+EAKGFNP LIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRE
Sbjct: 8  GNVINDIEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRE 67

Query: 70 RLKQGVSAPGE 81
          RLKQGVSAPGE
Sbjct: 68 RLKQGVSAPGE 78

[Close]

BLAST of Spg033210 vs. ExPASy TrEMBL
Match: A0A1S3B680 (DNA-binding protein S1FA-like OS=Cucumis melo OX=3656 GN=LOC103486467 PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.7e-27
Identity = 69/71 (97.18%), Postives = 69/71 (97.18%), Query Frame = 0


Query: 10 GNVINDVEAKGFNPGLIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRE 69
          GNVINDVEAKGFNP LIVLLLVGGLLL FLVGNYALYLYAQKNLPPKKKKPVSKKKMKRE
Sbjct: 8  GNVINDVEAKGFNPALIVLLLVGGLLLTFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRE 67

Query: 70 RLKQGVSAPGE 81
          RLKQGVSAPGE
Sbjct: 68 RLKQGVSAPGE 78

[Close]

BLAST of Spg033210 vs. ExPASy TrEMBL
Match: A0A6J1KUC5 (DNA-binding protein S1FA-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498311 PE=3 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.3e-27
Identity = 67/72 (93.06%), Postives = 71/72 (98.61%), Query Frame = 0


Query: 9  VGNVINDVEAKGFNPGLIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKR 68
          +GNV+NDV AKGFNPGL+VLLLVGGLLLIFL+GNYALYLYAQKNLPPKKKKPVSKKKMKR
Sbjct: 1  MGNVMNDVAAKGFNPGLMVLLLVGGLLLIFLIGNYALYLYAQKNLPPKKKKPVSKKKMKR 60

Query: 69 ERLKQGVSAPGE 81
          ERLKQGVSAPGE
Sbjct: 61 ERLKQGVSAPGE 72

[Close]

BLAST of Spg033210 vs. ExPASy TrEMBL
Match: A0A6J1KWU8 (DNA-binding protein S1FA-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498311 PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.0e-27
Identity = 67/71 (94.37%), Postives = 70/71 (98.59%), Query Frame = 0


Query: 10 GNVINDVEAKGFNPGLIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRE 69
          GNV+NDV AKGFNPGL+VLLLVGGLLLIFL+GNYALYLYAQKNLPPKKKKPVSKKKMKRE
Sbjct: 8  GNVMNDVAAKGFNPGLMVLLLVGGLLLIFLIGNYALYLYAQKNLPPKKKKPVSKKKMKRE 67

Query: 70 RLKQGVSAPGE 81
          RLKQGVSAPGE
Sbjct: 68 RLKQGVSAPGE 78

[Close]

BLAST of Spg033210 vs. TAIR 10
Match: AT3G09735.1 (S1FA-like DNA-binding protein )

HSP 1 Score: 102.8 bits (255), Expect = 1.3e-22
Identity = 50/65 (76.92%), Postives = 59/65 (90.77%), Query Frame = 0


Query: 16 VEAKGFNPGLIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRERLKQGV 75
          +E+KG NPGLIVLL++GGLLL FLVGN+ LY YAQKNLPP+KKKPVSKKKMK+E++KQGV
Sbjct: 9  IESKGLNPGLIVLLVIGGLLLTFLVGNFILYTYAQKNLPPRKKKPVSKKKMKKEKMKQGV 68

Query: 76 SAPGE 81
            PGE
Sbjct: 69 QVPGE 73

[Close]

BLAST of Spg033210 vs. TAIR 10
Match: AT3G53370.1 (S1FA-like DNA-binding protein )

HSP 1 Score: 102.4 bits (254), Expect = 1.7e-22
Identity = 51/64 (79.69%), Postives = 58/64 (90.62%), Query Frame = 0


Query: 17 EAKGFNPGLIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRERLKQGVS 76
          EAKG NPGLIVLL+VGG LL+FL+ NY LY+YAQKNLPP+KKKPVSKKK+KRE+LKQGV 
Sbjct: 13 EAKGLNPGLIVLLVVGGPLLVFLIANYVLYVYAQKNLPPRKKKPVSKKKLKREKLKQGVP 72

Query: 77 APGE 81
           PGE
Sbjct: 73 VPGE 76

[Close]

BLAST of Spg033210 vs. TAIR 10
Match: AT2G37120.1 (S1FA-like DNA-binding protein )

HSP 1 Score: 102.1 bits (253), Expect = 2.2e-22
Identity = 49/65 (75.38%), Postives = 59/65 (90.77%), Query Frame = 0


Query: 16 VEAKGFNPGLIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRERLKQGV 75
          VEAKG NPGLIVLL++GGLL+ FL+ NY +Y+YAQKNLPP+KKKP+SKKK+KRE+LKQGV
Sbjct: 12 VEAKGLNPGLIVLLVIGGLLVTFLIANYVMYMYAQKNLPPRKKKPLSKKKLKREKLKQGV 71

Query: 76 SAPGE 81
            PGE
Sbjct: 72 PVPGE 76

[Close]

BLAST of Spg033210 vs. TAIR 10
Match: AT3G53370.2 (S1FA-like DNA-binding protein )

HSP 1 Score: 53.9 bits (128), Expect = 6.8e-08
Identity = 26/33 (78.79%), Postives = 30/33 (90.91%), Query Frame = 0


Query: 48 YAQKNLPPKKKKPVSKKKMKRERLKQGVSAPGE 81
          +A KNLPP+KKKPVSKKK+KRE+LKQGV  PGE
Sbjct: 6  FAGKNLPPRKKKPVSKKKLKREKLKQGVPVPGE 38

The following BLAST results are available for this feature:

BLAST of Spg033210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145490.1	9.5e-28	97.18	DNA-binding protein S1FA-like [Momordica charantia]	[more]
XP_038905724.1	9.5e-28	98.59	DNA-binding protein S1FA-like [Benincasa hispida]	[more]
KAE8651038.1	1.2e-27	97.18	hypothetical protein Csa_000825 [Cucumis sativus]	[more]
XP_004137812.1	1.2e-27	97.18	DNA-binding protein S1FA [Cucumis sativus]	[more]
XP_008442666.1	3.6e-27	97.18	PREDICTED: DNA-binding protein S1FA-like [Cucumis melo]	[more]

BLAST of Spg033210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42552	1.7e-24	82.35	DNA-binding protein S1FA OS=Spinacia oleracea OX=3562 GN=S1FA PE=3 SV=1	[more]
Q93VI0	1.8e-21	76.92	DNA-binding protein S1FA3 OS=Arabidopsis thaliana OX=3702 GN=S1FA3 PE=3 SV=1	[more]
P42551	2.4e-21	79.69	DNA-binding protein S1FA1 OS=Arabidopsis thaliana OX=3702 GN=S1FA1 PE=3 SV=2	[more]
Q42337	3.1e-21	75.38	DNA-binding protein S1FA2 OS=Arabidopsis thaliana OX=3702 GN=S1FA2 PE=3 SV=2	[more]
Q7XLX6	9.0e-21	72.86	DNA-binding protein S1FA2 OS=Oryza sativa subsp. japonica OX=39947 GN=S1FA2 PE=3...	[more]

BLAST of Spg033210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CUM0	4.6e-28	97.18	DNA-binding protein S1FA-like OS=Momordica charantia OX=3673 GN=LOC111014929 PE=...	[more]
A0A0A0LAW3	6.0e-28	97.18	DNA-binding protein S1FA OS=Cucumis sativus OX=3659 GN=Csa_3G736950 PE=3 SV=1	[more]
A0A1S3B680	1.7e-27	97.18	DNA-binding protein S1FA-like OS=Cucumis melo OX=3656 GN=LOC103486467 PE=3 SV=1	[more]
A0A6J1KUC5	2.3e-27	93.06	DNA-binding protein S1FA-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1KWU8	3.0e-27	94.37	DNA-binding protein S1FA-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]

BLAST of Spg033210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09735.1	1.3e-22	76.92	S1FA-like DNA-binding protein	[more]
AT3G53370.1	1.7e-22	79.69	S1FA-like DNA-binding protein	[more]
AT2G37120.1	2.2e-22	75.38	S1FA-like DNA-binding protein	[more]
AT3G53370.2	6.8e-08	78.79	S1FA-like DNA-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006779	DNA binding protein S1FA	PFAM	PF04689	S1FA	coord: 16..80 e-value: 2.2E-40 score: 136.6
IPR006779	DNA binding protein S1FA	PANTHER	PTHR35298	DNA-BINDING PROTEIN S1FA2	coord: 9..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..70
None	No IPR available	PANTHER	PTHR35298:SF9	DNA-BINDING PROTEIN S1FA1-RELATED	coord: 9..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg033210.1	Spg033210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding