Spg033086 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg033086
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	GDSL esterase/lipase CPRD49
Location	scaffold5: 1124171 .. 1124750 (-)
RNA-Seq Expression	Spg033086
Synteny	Spg033086

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAGACATTTCCCATCCCTGGCTCGGGGGACTTTTTGTCCCTATCCTCGCCATTTGGGAGTGGGGATATGGGGTAGGGTAGGGATTTCCGAATCAAGGACGGGAAGACATTTCCCATCGCCCTGGCTCGGGGGACTTTTTCTCCCCATCCTCGCCATTTGGGAGTGGGGATATGGGGGTAGGGTAGGGATTTCTGAATCAAGGACGGGAAGACATTTCCCATCCCTGGCTCGGGGGACCTTTTTGTCCCCATCCTTGCCATTTGGGAGCGGGGATATAGGGGTAGGGTAGGGATTTCCCACTTAAGGACGATTTTTTTTTTTTTCAAAAGGCATATCAAACACACTAGTCATTTTGTTTTTGTTTTGTGTCCAATTTCAGGGATGGATTCCATCTTACAGCAGCAGGAAGCGCAATAGTGTCTGAAGAAATTTTGAAGGCCTTGAAAGAGGCAGATTGGGTACCCAACTTGCACTGGAGTTCGCTGCCAATTGAATACGACCAGATCACTTCCTTTCCCCTTGTGGCTCCAGGCGGAGGCGTGCGTCTGGGTTACACTATGTTCGGATTGACCTAA

mRNA sequence

ATGGGGAGACATTTCCCATCCCTGGCTCGGGGGACTTTTTGTCCCTATCCTCGCCATTTGGGAGTGGGGATATGGGGTAGGGTAGGGATTTCCGAATCAAGGACGGGAAGACATTTCCCATCGCCCTGGCTCGGGGGACTTTTTCTCCCCATCCTCGCCATTTGGGAGTGGGGATATGGGGGTAGGGTAGGGATTTCTGAATCAAGGACGGGAAGACATTTCCCATCCCTGGCTCGGGGGACCTTTTTGGATGGATTCCATCTTACAGCAGCAGGAAGCGCAATAGTGTCTGAAGAAATTTTGAAGGCCTTGAAAGAGGCAGATTGGGTACCCAACTTGCACTGGAGTTCGCTGCCAATTGAATACGACCAGATCACTTCCTTTCCCCTTGTGGCTCCAGGCGGAGGCGTGCGTCTGGGTTACACTATGTTCGGATTGACCTAA

Coding sequence (CDS)

ATGGGGAGACATTTCCCATCCCTGGCTCGGGGGACTTTTTGTCCCTATCCTCGCCATTTGGGAGTGGGGATATGGGGTAGGGTAGGGATTTCCGAATCAAGGACGGGAAGACATTTCCCATCGCCCTGGCTCGGGGGACTTTTTCTCCCCATCCTCGCCATTTGGGAGTGGGGATATGGGGGTAGGGTAGGGATTTCTGAATCAAGGACGGGAAGACATTTCCCATCCCTGGCTCGGGGGACCTTTTTGGATGGATTCCATCTTACAGCAGCAGGAAGCGCAATAGTGTCTGAAGAAATTTTGAAGGCCTTGAAAGAGGCAGATTGGGTACCCAACTTGCACTGGAGTTCGCTGCCAATTGAATACGACCAGATCACTTCCTTTCCCCTTGTGGCTCCAGGCGGAGGCGTGCGTCTGGGTTACACTATGTTCGGATTGACCTAA

Protein sequence

MGRHFPSLARGTFCPYPRHLGVGIWGRVGISESRTGRHFPSPWLGGLFLPILAIWEWGYGGRVGISESRTGRHFPSLARGTFLDGFHLTAAGSAIVSEEILKALKEADWVPNLHWSSLPIEYDQITSFPLVAPGGGVRLGYTMFGLT

Homology

[Close]

BLAST of Spg033086 vs. NCBI nr
Match: KAG6763768.1 (hypothetical protein POTOM_031207 [Populus tomentosa])

HSP 1 Score: 80.1 bits (196), Expect = 1.8e-11
Identity = 40/85 (47.06%), Postives = 53/85 (62.35%), Query Frame = 0


Query: 52  LAIWEWGYGGRV-GISESRTGRHFPSLARGTFLDGFHLTAAGSAIVSEEILKALKEADWV 111
           L ++  G+GG   G     + R  P+     F+DG HL+A GS IV EEILK LKEA+WV
Sbjct: 197 LMVFLGGFGGHSDGSLVVNSDRSDPNPNTSLFIDGIHLSAEGSKIVVEEILKVLKEAEWV 256

Query: 112 PNLHWSSLPIEYDQITSFPLVAPGG 136
           P+LHW SLP E+ + + + LVA  G
Sbjct: 257 PSLHWKSLPTEFSEDSPYDLVAADG 281

[Close]

BLAST of Spg033086 vs. NCBI nr
Match: GFP87798.1 (GDSL esterase/lipase cprd49 [Phtheirospermum japonicum])

HSP 1 Score: 74.3 bits (181), Expect = 9.6e-10
Identity = 32/54 (59.26%), Postives = 39/54 (72.22%), Query Frame = 0


Query: 82  FLDGFHLTAAGSAIVSEEILKALKEADWVPNLHWSSLPIEYDQITSFPLVAPGG 136
           F DG HL+A GS +V EEILK LKEADW PNLHW S+P E+ + + + LVA  G
Sbjct: 185 FTDGVHLSAEGSKVVVEEILKVLKEADWEPNLHWKSMPTEFSEDSPYDLVASDG 238

[Close]

BLAST of Spg033086 vs. NCBI nr
Match: KAF9674612.1 (hypothetical protein SADUNF_Sadunf10G0145100 [Salix dunnii])

HSP 1 Score: 73.9 bits (180), Expect = 1.3e-09
Identity = 32/58 (55.17%), Postives = 42/58 (72.41%), Query Frame = 0


Query: 78  ARGTFLDGFHLTAAGSAIVSEEILKALKEADWVPNLHWSSLPIEYDQITSFPLVAPGG 136
           A+  F DG HL+A GS IV EEILK L+EA+WVP+LHW S+P E+ + + + LVA  G
Sbjct: 237 AKACFTDGVHLSAEGSKIVVEEILKVLREAEWVPSLHWKSIPTEFSEDSPYDLVAADG 294

[Close]

BLAST of Spg033086 vs. NCBI nr
Match: KAF9845779.1 (hypothetical protein H0E87_020696 [Populus deltoides])

HSP 1 Score: 73.9 bits (180), Expect = 1.3e-09
Identity = 32/54 (59.26%), Postives = 40/54 (74.07%), Query Frame = 0


Query: 82  FLDGFHLTAAGSAIVSEEILKALKEADWVPNLHWSSLPIEYDQITSFPLVAPGG 136
           F DG HL+A GS IV EEILK LKEA+WVP+LHW S+P E+ + + + LVA  G
Sbjct: 190 FTDGIHLSAEGSKIVVEEILKVLKEAEWVPSLHWKSMPTEFSEDSPYDLVAADG 243

[Close]

BLAST of Spg033086 vs. NCBI nr
Match: KAB2598384.1 (GDSL esterase/lipase CPRD49 [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 73.9 bits (180), Expect = 1.3e-09
Identity = 34/66 (51.52%), Postives = 44/66 (66.67%), Query Frame = 0


Query: 82  FLDGFHLTAAGSAIVSEEILKALKEADWVPNLHWSSLPIEYDQITSFPLVAPGGGVRL-- 141
           F DG H +A GS +V EEILK L+EADW P+LHW S+PIE+ + + + LVA  G   L  
Sbjct: 185 FTDGIHFSAEGSKVVVEEILKVLREADWKPSLHWKSMPIEFSEDSPYDLVAADGKTTLNP 244

Query: 142 -GYTMF 145
            G+T F
Sbjct: 245 SGWTYF 250

[Close]

BLAST of Spg033086 vs. ExPASy Swiss-Prot
Match: Q9SRM5 (GDSL esterase/lipase CPRD49 OS=Arabidopsis thaliana OX=3702 GN=CPRD49 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.0e-09
Identity = 27/54 (50.00%), Postives = 38/54 (70.37%), Query Frame = 0


Query: 82  FLDGFHLTAAGSAIVSEEILKALKEADWVPNLHWSSLPIEYDQITSFPLVAPGG 136
           F DG HL+A GS IV+ EIL+ +KEA+W P+LHW S+P E+   + + LV+  G
Sbjct: 185 FTDGIHLSAQGSKIVAGEILRVVKEAEWHPSLHWKSMPTEFADDSPYDLVSADG 238

[Close]

BLAST of Spg033086 vs. ExPASy Swiss-Prot
Match: O80443 (GDSL esterase/lipase At2g38180 OS=Arabidopsis thaliana OX=3702 GN=At2g38180 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 9.4e-08
Identity = 24/41 (58.54%), Postives = 30/41 (73.17%), Query Frame = 0


Query: 82  FLDGFHLTAAGSAIVSEEILKALKEADWVPNLHWSSLPIEY 123
           F DG H TA  S IV +EILK L+ ADW P+L+W SLP+E+
Sbjct: 183 FTDGIHFTAKASEIVVKEILKVLRGADWKPSLYWKSLPVEF 223

[Close]

BLAST of Spg033086 vs. ExPASy TrEMBL
Match: A0A5E4EU30 (PREDICTED: GDSL OS=Prunus dulcis OX=3755 GN=ALMOND_2B031935 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 6.1e-10
Identity = 33/58 (56.90%), Postives = 41/58 (70.69%), Query Frame = 0


Query: 82  FLDGFHLTAAGSAIVSEEILKALKEADWVPNLHWSSLPIEYDQITSFPLVAPGGGVRL 140
           F DG HL+A GS IV EEILK LKEADW P+LHW S+P+E+ + + + LVA  G   L
Sbjct: 185 FTDGIHLSAEGSKIVVEEILKVLKEADWKPSLHWKSMPLEFAEDSPYDLVAADGKTTL 242

[Close]

BLAST of Spg033086 vs. ExPASy TrEMBL
Match: B9HHP2 (SGNH_hydro domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_008G068000 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 6.1e-10
Identity = 32/54 (59.26%), Postives = 40/54 (74.07%), Query Frame = 0


Query: 82  FLDGFHLTAAGSAIVSEEILKALKEADWVPNLHWSSLPIEYDQITSFPLVAPGG 136
           F DG HL+A GS IV EEILK LKEA+WVP+LHW S+P E+ + + + LVA  G
Sbjct: 185 FTDGIHLSAEGSKIVVEEILKVLKEAEWVPSLHWKSMPTEFSEDSPYDLVAADG 238

[Close]

BLAST of Spg033086 vs. ExPASy TrEMBL
Match: A0A6M2ER87 (SGNH_hydro domain-containing protein OS=Populus davidiana OX=266767 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 6.1e-10
Identity = 32/54 (59.26%), Postives = 40/54 (74.07%), Query Frame = 0


Query: 82  FLDGFHLTAAGSAIVSEEILKALKEADWVPNLHWSSLPIEYDQITSFPLVAPGG 136
           F DG HL+A GS IV EEILK LKEA+WVP+LHW S+P E+ + + + LVA  G
Sbjct: 185 FTDGIHLSAEGSKIVVEEILKVLKEAEWVPSLHWKSMPTEFSEDSPYDLVAADG 238

[Close]

BLAST of Spg033086 vs. ExPASy TrEMBL
Match: A0A4U5QGR2 (GDSL-motif lipase/hydrolase family protein OS=Populus alba OX=43335 GN=D5086_0000111810 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 6.1e-10
Identity = 32/54 (59.26%), Postives = 40/54 (74.07%), Query Frame = 0


Query: 82  FLDGFHLTAAGSAIVSEEILKALKEADWVPNLHWSSLPIEYDQITSFPLVAPGG 136
           F DG HL+A GS IV EEILK LKEA+WVP+LHW S+P E+ + + + LVA  G
Sbjct: 185 FTDGIHLSAEGSKIVVEEILKVLKEAEWVPSLHWKSMPTEFSEDSPYDLVAADG 238

[Close]

BLAST of Spg033086 vs. ExPASy TrEMBL
Match: A0A5N5FJ52 (GDSL esterase/lipase CPRD49 OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_001304 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 6.1e-10
Identity = 34/66 (51.52%), Postives = 44/66 (66.67%), Query Frame = 0


Query: 82  FLDGFHLTAAGSAIVSEEILKALKEADWVPNLHWSSLPIEYDQITSFPLVAPGGGVRL-- 141
           F DG H +A GS +V EEILK L+EADW P+LHW S+PIE+ + + + LVA  G   L  
Sbjct: 185 FTDGIHFSAEGSKVVVEEILKVLREADWKPSLHWKSMPIEFSEDSPYDLVAADGKTTLNP 244

Query: 142 -GYTMF 145
            G+T F
Sbjct: 245 SGWTYF 250

[Close]

BLAST of Spg033086 vs. TAIR 10
Match: AT3G11210.1 (SGNH hydrolase-type esterase superfamily protein )

HSP 1 Score: 64.7 bits (156), Expect = 7.1e-11
Identity = 27/54 (50.00%), Postives = 38/54 (70.37%), Query Frame = 0


Query: 82  FLDGFHLTAAGSAIVSEEILKALKEADWVPNLHWSSLPIEYDQITSFPLVAPGG 136
           F DG HL+A GS IV+ EIL+ +KEA+W P+LHW S+P E+   + + LV+  G
Sbjct: 185 FTDGIHLSAQGSKIVAGEILRVVKEAEWHPSLHWKSMPTEFADDSPYDLVSADG 238

[Close]

BLAST of Spg033086 vs. TAIR 10
Match: AT2G38180.1 (SGNH hydrolase-type esterase superfamily protein )

HSP 1 Score: 58.2 bits (139), Expect = 6.7e-09
Identity = 24/41 (58.54%), Postives = 30/41 (73.17%), Query Frame = 0


Query: 82  FLDGFHLTAAGSAIVSEEILKALKEADWVPNLHWSSLPIEY 123
           F DG H TA  S IV +EILK L+ ADW P+L+W SLP+E+
Sbjct: 183 FTDGIHFTAKASEIVVKEILKVLRGADWKPSLYWKSLPVEF 223

The following BLAST results are available for this feature:

BLAST of Spg033086 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6763768.1	1.8e-11	47.06	hypothetical protein POTOM_031207 [Populus tomentosa]	[more]
GFP87798.1	9.6e-10	59.26	GDSL esterase/lipase cprd49 [Phtheirospermum japonicum]	[more]
KAF9674612.1	1.3e-09	55.17	hypothetical protein SADUNF_Sadunf10G0145100 [Salix dunnii]	[more]
KAF9845779.1	1.3e-09	59.26	hypothetical protein H0E87_020696 [Populus deltoides]	[more]
KAB2598384.1	1.3e-09	51.52	GDSL esterase/lipase CPRD49 [Pyrus ussuriensis x Pyrus communis]	[more]

BLAST of Spg033086 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRM5	1.0e-09	50.00	GDSL esterase/lipase CPRD49 OS=Arabidopsis thaliana OX=3702 GN=CPRD49 PE=2 SV=1	[more]
O80443	9.4e-08	58.54	GDSL esterase/lipase At2g38180 OS=Arabidopsis thaliana OX=3702 GN=At2g38180 PE=2...	[more]

BLAST of Spg033086 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5E4EU30	6.1e-10	56.90	PREDICTED: GDSL OS=Prunus dulcis OX=3755 GN=ALMOND_2B031935 PE=4 SV=1	[more]
B9HHP2	6.1e-10	59.26	SGNH_hydro domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_008...	[more]
A0A6M2ER87	6.1e-10	59.26	SGNH_hydro domain-containing protein OS=Populus davidiana OX=266767 PE=4 SV=1	[more]
A0A4U5QGR2	6.1e-10	59.26	GDSL-motif lipase/hydrolase family protein OS=Populus alba OX=43335 GN=D5086_000...	[more]
A0A5N5FJ52	6.1e-10	51.52	GDSL esterase/lipase CPRD49 OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=...	[more]

BLAST of Spg033086 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11210.1	7.1e-11	50.00	SGNH hydrolase-type esterase superfamily protein	[more]
AT2G38180.1	6.7e-09	58.54	SGNH hydrolase-type esterase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR14209:SF32	GDSL ESTERASE/LIPASE CPRD49-LIKE ISOFORM X1	coord: 81..137
IPR045136	Isoamyl acetate-hydrolyzing esterase Iah1-like	PANTHER	PTHR14209	ISOAMYL ACETATE-HYDROLYZING ESTERASE 1	coord: 81..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg033086.1	Spg033086.1	mRNA