Spg033009 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg033009
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUbiquitin carboxyl-terminal hydrolase
Locationscaffold5: 5704878 .. 5709076 (+)
RNA-Seq ExpressionSpg033009
SyntenySpg033009
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTTCGAAACACAGCAGCCTTCGGGTCTTCTTCACGATTTCCGTTGGCCTCTTTTCTTCTCACTTTGTCACGGTCGCTGTCGCTTGTTGCAATTTCCGCCGGAAGTTTCCTCCAAAATCTCCAGTCACCCACCGTTTTTCTGGTTCATCGTAAGTTTAAGTTTTTCTTCTTTTTGATCTTTTAAAACCTCCTTTTAGAGTTAACCTAGATAAACAAACTGAGGCCCAACCCAATAAAAGAACTGTTTTAAAATTTTTTTAAAAAAGAATGATTATTAAACTGCTCTCAAGAAAATTTTATATATATACTTATTTTTTTTTTTAAAAAATCTATATATATACTAAAAAATTTAAAATATATATATATATAAAACAACGTATCTTCAACGTGTTTGTATCTTAATTTTTTTAGAATTTGACGTATCGCCGTGTCCTGTCGTGTCCGTGTCCCGTGTCTGTGTCCGTGCTTCTTAGGTTTCTCCTTTTCTATTAGTTTGTTATATGTTGTATTAGGGATGGCTCAGATATCTATTATTGGGAAGATGCTTGGGTGGGGAAGAAACCTCTGTGTTGTGTGGTTTGTTTCCTCAGCTTTATCATTTGTCTAAGAAAAGGCTGTATTCAGTAGTCTCTGTTTTGCCCCTTGTTGATCAGGCCTTTTTGATATCCTTGGGTTTTCGTTGTTTGCTCACTGATCGAGAGGCGATCAAGGTCGTTAGCCTTCTTTCTCTTATTGCCAATCAGGTGACTTGTCATGGGAGAAGGGATTCTAAGCTTTAGGTTTTGAAACCTTGTGAGGGTGTCTCTTGTGCCTCTTCTTTTCATATCCTTTGTTCTCCTTCTCCATCTTAGGGTGCCTTTGTGTTCTCCTCTCTTTGGAAGGTTAAAATTCCTAAAAGATTGAAGTTCTTTGCCTGGCAAGTTTTGCACGGGCGAGCTAATGCTCAAGATCGCATTCAAAGGTTTTCTTTTTTTGTGTTGCGGCCGCATTGGTGTGTTCTTTGTCGGAGTAAGAGGACCTTGATCATATTTTATGGGAATGCCTTTTTGTGTGTTCCATTTGGAGCTGTTTTCTTAGGACCCTTGGTGTTGCATTTTTGCGAGAAAGGAAGAATCTTGTAGCATACTTGGTTTTTTGCCATCTTGGGAGGGCATTTGACTTGAAAGGAATAGTAGAATTTTTAGAGGGGTTGAAAGATTTGGTGAGGAACTTTGGGAGGTGATTATGTTTAATTCATCTCTTTGAGCATGACTGACTCAGGGTTTTTGTAATTATCAACTTGACATTATTCTCTTGGATTGGGATCTGTTTTGTAATTAGTTGTGCAGGTGTTTTTCTTTCATTTTTTCTCGGGTCTTTGTTTCTCATTAAAAAAGGAAAAAAGGCTGGTTTTTGCTGTGGCATCTTGTATTGATATGTTCTGATTTTTTGATAGGCATTATGAAGTTAAAGCAACATCAAATTATGCTGGCCGACACTTCAGAGCTGAAGAAACGTTGCAGGATGTTTTTCCTCTGCAAATTAGGATACTGGTATCATCGGAGACAAGTTTGTTAACTGTGAAGATAAACCGAAAGGTGATTTCTCTATCTGGTCTCTAACACTAATTACTAATACTGGAAACTGACCTACGTAAACTCCGATTGCTATCTTTTTGCATCGAAGCTGTGAAAGAATCAATGTGTAAAATATTTGGGATGGAATCTTTGTTAGAGAAGAAATACTTCCATAAAAAAATGAAGATAAGGTATCTTCCCAGAAGCCTCCCAAGGAGATTATAAAAGGATCTCTAGCTAGTAAGTATGGAGACAGCTAGCTGGTATGGAGACAGAGGAACAATTATAAATTTCCTTGACACAGACCACCAGAAAGACCCAGTGAAAAAGCCCCAGCTATTTGAATCTTTGATTACGTACAAAGACTCTTAGAAAATTTTACTATTCCTCCGTAACCATACTTTCTAAAAGAAAGCAAAATGTGGAGCCAAGTAAAGATCCATTTAGTGTGCAGGTAATTTCTTTTGAGAGCTTCAACCTTAGAATTTGTCCTTTATAAAAATTCATTCCTCTCTAACCAAATCCCATATATAAATCCTGGGATGGAAGGAAAAGTTGGCTTCTACTTCGGCAAGGAATTCAAAATATAAAAAATTTAATTTGCTTGCTCTTGTATTCTGTAATTTGAATTTTCTTGAGCTTTCTTGAGCTATCCTTTGTTGATTACTTTTCAGAACCTCATGTGATCTTTTCTTATGTGTTCCTTCCTCGCTTTATTAATAAAAAAAAGTAAAACCACAGAATTTTTTAAGCCATAGGACGAACCTTGTTTTGGATTTTTTTTTTGTGGTCGATCTAGATTGAAAGAAATCATAGAATTTTTTATTCGAAGGAGAAAGCCTATCCGGTCTTTTTTGATAGGGTCTTTTCCTTGCCTTATCATGGAGTAAAATGGTCCCTCTTTTTACCTTTTATAGTTTTTCTTTTCTTCTCTCCAATTGGCGATGTTTATTGTAACTCTATTAGATTGGGGCTTTTCTCTTCCCCTTATCAATCAAAGCGTATTGTCAAAAAAAAAAAAAAAAAGATAAAACCTTTCAATTCCTTATCACGATATTCTGAGAATTTCTTGTTTACTACTTTTTTTCTTATCTGTATATCGTGCTTCTGATAGAAGACTGTCATTTCAGGATAACTTAGCTGACTTTTATAAGAGAGCTTCCATTATTTTCAATTCTAACTCTGAACTGGTAAGTTAGCTTACAATTAATATTGCAAGTTTTGTTAAACTTCTTGTTGTACCATGGTACTAATATTTATTTACCCCGTTAATCTAATTGGCAGTTTCACATTTGGGACTTCTCAGGGCAAACAAATCAACTTTTCACAAATAATATGAACAATTTTCTTGATGATTCTCCTATTCAACGAGTCAAAGAGGCAAGTATATCTGTATCCGAGCAATTGGAGCTGAATAGTTATTTCATTGTACTGCTGAATTCATTGACAAATGCCGTGCAAAACCTTGCTACTAAATGAGAGTCCAGAGTGGAAGTTTCTGGAAGTGGAATATGCATACATTGATTTTTTCTTTTGTTCTTGTAAATCTTCATGGTTTCCATTTGATTTAGTCAAGAAGATTTTTGTCATCCAAGATGGATATTGATTGAACTATAAGTAGTATTTGTGTATTTTGGGAAACTATTATTATGGAGGGTGCAGAACAATTTATTAGAGCTGGTGAAGCCTTTACTTTGACATCGTTGAAGTTTTATCCTTTTGGTTTTGACCCTTTATTCTTTAGATAAAACCTTGCTCGCTCCTACACGATTTAGGCTTGAAAATTTATTGTTACATAACCAAGCTTTAAGGTTAAATGATCATGAATGGTGGAATCCTGTGGCCCTGTTGCCTCCAAGATCTCATTAAAGATATCGATGGACTTGTATCCTTAGAAAAATTTAAAGGTAGTGGTTGATTCTATGATACTGTGGGGAGGGAGCAAGATTTATTCAATGATGCAATCTTGGAGAGTTAGTCTTAGGAAAGATCAAGTTTCTCCTTTGGGAGCTTAGTCACTTAACCCTAAACACTCATGACATACACGGAAGTGGCTTCCTTAGTTATCTTTCTTCCCAGGATGGTGTCCCCCTTTGCAAGAAGGATTCAGAAACACAAAGCCACATTTCCCTCAATTGTTCCTTTCCCGGAAATTTTTGGGCATTTATCCTCTCCACCATCAATTGAAGTGGTGCTCCCCATGGATGTAAACACAAACTTCTCCCTAGTACATTAGCTGGCCTCGCCTTCAAGAACGATAAAGCAATGAGTTAGCTTCATTCTACAATATGGTTTTCAGCCTTAGAGGAAGACCCCGGGAAGCTTTCTTGCTTGTCTCTCCTTTTTAGCTAATTATAGTATGAAGAGTCCATGGGAGAAGTTTCTTAGTAACCTCCTTGGTTGGGGGCTTGGTTTTCCTGCCCCTTTGTAATTTCATTTCATCGATTAAATTATTTCTTACAAGCAGAAAAAATTTGAAAGAATTGTCAAATAGATTTCTTTTCCACTCATTGATTAGTGGTGCTTCACCGTAAAAGTTCTTCACAATTCTATGCGAAGCTTGCTTTTGCTCCGCTGCAGTTCAATAGATTAGAAATTTTTTCTTCAAATTTTGGGGTTTAATTTAATAGATCATATTTC

mRNA sequence

ATGATTTCGAAACACAGCAGCCTTCGGGTCTTCTTCACGATTTCCGTTGGCCTCTTTTCTTCTCACTTTGTCACGGTCGCTGTCGCTTGTTGCAATTTCCGCCGGAAGTTTCCTCCAAAATCTCCAGTCACCCACCGTTTTTCTGGTTCATCATGCTTGGGTGGGGAAGAAACCTCTGTGTTGTGTGGTTTGTTTCCTCAGCTTTATCATTTGTCTAAGAAAAGGCTGTATTCAGTAGTCTCTGTTTTGCCCCTTGTTGATCAGGCCTTTTTGATATCCTTGGGTTTTCGTTGTTTGCTCACTGATCGAGAGGCGATCAAGGTCGTTAGCCTTCTTTCTCTTATTGCCAATCAGGGTGCCTTTGTGTTCTCCTCTCTTTGGAAGGTTAAAATTCCTAAAAGATTGAAGTTCTTTGCCTGGCAAGTTTTGCACGGGCGAGCTAATGCTCAAGATCGCATTCAAAGGACCCTTGGTGTTGCATTTTTGCGAGAAAGGAAGAATCTTGTAGCATACTTGGTTTTTTGCCATCTTGGGAGGGCATTTGACTTGAAAGGAATAGTAGAATTTTTAGAGGGGTTGAAAGATTTGGTGAGGAACTTTGGGAGGCATTATGAAGTTAAAGCAACATCAAATTATGCTGGCCGACACTTCAGAGCTGAAGAAACGTTGCAGGATGTTTTTCCTCTGCAAATTAGGATACTGGTATCATCGGAGACAAGTTTGTTAACTGTGAAGATAAACCGAAAGGATAACTTAGCTGACTTTTATAAGAGAGCTTCCATTATTTTCAATTCTAACTCTGAACTGTTTCACATTTGGGACTTCTCAGGGCAAACAAATCAACTTTTCACAAATAATATGAACAATTTTCTTGATGATTCTCCTATTCAACGAGTCAAAGAGGCAAGTATATCTGTATCCGAGCAATTGGAGCTGAATAGTTATTTCATTGTACTGCTGAATTCATTGACAAATGCCGTGCAAAACCTTGCTACTAAATGA

Coding sequence (CDS)

ATGATTTCGAAACACAGCAGCCTTCGGGTCTTCTTCACGATTTCCGTTGGCCTCTTTTCTTCTCACTTTGTCACGGTCGCTGTCGCTTGTTGCAATTTCCGCCGGAAGTTTCCTCCAAAATCTCCAGTCACCCACCGTTTTTCTGGTTCATCATGCTTGGGTGGGGAAGAAACCTCTGTGTTGTGTGGTTTGTTTCCTCAGCTTTATCATTTGTCTAAGAAAAGGCTGTATTCAGTAGTCTCTGTTTTGCCCCTTGTTGATCAGGCCTTTTTGATATCCTTGGGTTTTCGTTGTTTGCTCACTGATCGAGAGGCGATCAAGGTCGTTAGCCTTCTTTCTCTTATTGCCAATCAGGGTGCCTTTGTGTTCTCCTCTCTTTGGAAGGTTAAAATTCCTAAAAGATTGAAGTTCTTTGCCTGGCAAGTTTTGCACGGGCGAGCTAATGCTCAAGATCGCATTCAAAGGACCCTTGGTGTTGCATTTTTGCGAGAAAGGAAGAATCTTGTAGCATACTTGGTTTTTTGCCATCTTGGGAGGGCATTTGACTTGAAAGGAATAGTAGAATTTTTAGAGGGGTTGAAAGATTTGGTGAGGAACTTTGGGAGGCATTATGAAGTTAAAGCAACATCAAATTATGCTGGCCGACACTTCAGAGCTGAAGAAACGTTGCAGGATGTTTTTCCTCTGCAAATTAGGATACTGGTATCATCGGAGACAAGTTTGTTAACTGTGAAGATAAACCGAAAGGATAACTTAGCTGACTTTTATAAGAGAGCTTCCATTATTTTCAATTCTAACTCTGAACTGTTTCACATTTGGGACTTCTCAGGGCAAACAAATCAACTTTTCACAAATAATATGAACAATTTTCTTGATGATTCTCCTATTCAACGAGTCAAAGAGGCAAGTATATCTGTATCCGAGCAATTGGAGCTGAATAGTTATTTCATTGTACTGCTGAATTCATTGACAAATGCCGTGCAAAACCTTGCTACTAAATGA

Protein sequence

MISKHSSLRVFFTISVGLFSSHFVTVAVACCNFRRKFPPKSPVTHRFSGSSCLGGEETSVLCGLFPQLYHLSKKRLYSVVSVLPLVDQAFLISLGFRCLLTDREAIKVVSLLSLIANQGAFVFSSLWKVKIPKRLKFFAWQVLHGRANAQDRIQRTLGVAFLRERKNLVAYLVFCHLGRAFDLKGIVEFLEGLKDLVRNFGRHYEVKATSNYAGRHFRAEETLQDVFPLQIRILVSSETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSGQTNQLFTNNMNNFLDDSPIQRVKEASISVSEQLELNSYFIVLLNSLTNAVQNLATK
Homology
[Close]
BLAST of Spg033009 vs. NCBI nr
Match: XP_022931260.1 (ubiquitin carboxyl-terminal hydrolase 8-like [Cucurbita moschata])

HSP 1 Score: 179.5 bits (454), Expect = 4.8e-41
Identity = 94/129 (72.87%), Postives = 104/129 (80.62%), Query Frame = 0 

Query: 178 GRAFDLKGIVEFLEGLKDLVRNFGRHYEVKATSNYAGRHFRAEETLQDVFPLQIRILVSS 237
           GR + L G   +L+ LK       RH +VK TSNYAGR FR EETLQDVFPLQIRILVS 
Sbjct: 159 GREYALIGEALWLQALK-------RHSDVKTTSNYAGRLFRDEETLQDVFPLQIRILVSW 218

Query: 238 ETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSGQTNQLFTNNMNNFLDDSPIQ 297
           ET+LL VKINRKDNLAD+YKRASIIFNS+SE FHIWDFSGQTNQLF NNMNNFLDDSP+Q
Sbjct: 219 ETNLLAVKINRKDNLADYYKRASIIFNSSSEPFHIWDFSGQTNQLFANNMNNFLDDSPVQ 278

Query: 298 RVKEASISV 307
           RVKE  + +
Sbjct: 279 RVKEVRLEL 280

[Close]
BLAST of Spg033009 vs. NCBI nr
Match: XP_023005698.1 (ubiquitin carboxyl-terminal hydrolase 8-like [Cucurbita maxima])

HSP 1 Score: 179.5 bits (454), Expect = 4.8e-41
Identity = 94/129 (72.87%), Postives = 104/129 (80.62%), Query Frame = 0 

Query: 178 GRAFDLKGIVEFLEGLKDLVRNFGRHYEVKATSNYAGRHFRAEETLQDVFPLQIRILVSS 237
           GR + L G   +L+ LK       RH +VK TSNYAGR FR EETLQDVFPLQIRILVS 
Sbjct: 159 GREYALIGEALWLQALK-------RHSDVKTTSNYAGRLFRDEETLQDVFPLQIRILVSW 218

Query: 238 ETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSGQTNQLFTNNMNNFLDDSPIQ 297
           ET+LL VKINRKDNLAD+YKRASIIFNS+SE FHIWDFSGQTNQLF NNMNNFLDDSP+Q
Sbjct: 219 ETNLLAVKINRKDNLADYYKRASIIFNSSSEPFHIWDFSGQTNQLFANNMNNFLDDSPVQ 278

Query: 298 RVKEASISV 307
           RVKE  + +
Sbjct: 279 RVKEVRLEL 280

[Close]
BLAST of Spg033009 vs. NCBI nr
Match: KAG6596631.1 (Ubiquitin carboxyl-terminal hydrolase 8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 178.7 bits (452), Expect = 8.2e-41
Identity = 94/129 (72.87%), Postives = 104/129 (80.62%), Query Frame = 0 

Query: 178 GRAFDLKGIVEFLEGLKDLVRNFGRHYEVKATSNYAGRHFRAEETLQDVFPLQIRILVSS 237
           GR + L G   +L+ LK       RH +VK TSNYAGR FR EETLQDVFPLQIRILVS 
Sbjct: 159 GREYALIGESLWLQALK-------RHSDVKTTSNYAGRLFRDEETLQDVFPLQIRILVSW 218

Query: 238 ETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSGQTNQLFTNNMNNFLDDSPIQ 297
           ET+LL VKINRKDNLAD+YKRASIIFNS+SE FHIWDFSGQTNQLF NNMNNFLDDSP+Q
Sbjct: 219 ETNLLAVKINRKDNLADYYKRASIIFNSSSEPFHIWDFSGQTNQLFANNMNNFLDDSPVQ 278

Query: 298 RVKEASISV 307
           RVKE  + +
Sbjct: 279 RVKEVRLEL 280

[Close]
BLAST of Spg033009 vs. NCBI nr
Match: KAG7028168.1 (Ubiquitin carboxyl-terminal hydrolase 8 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 178.7 bits (452), Expect = 8.2e-41
Identity = 94/129 (72.87%), Postives = 104/129 (80.62%), Query Frame = 0 

Query: 178 GRAFDLKGIVEFLEGLKDLVRNFGRHYEVKATSNYAGRHFRAEETLQDVFPLQIRILVSS 237
           GR + L G   +L+ LK       RH +VK TSNYAGR FR EETLQDVFPLQIRILVS 
Sbjct: 159 GREYALIGESLWLQALK-------RHSDVKTTSNYAGRLFRDEETLQDVFPLQIRILVSW 218

Query: 238 ETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSGQTNQLFTNNMNNFLDDSPIQ 297
           ET+LL VKINRKDNLAD+YKRASIIFNS+SE FHIWDFSGQTNQLF NNMNNFLDDSP+Q
Sbjct: 219 ETNLLAVKINRKDNLADYYKRASIIFNSSSEPFHIWDFSGQTNQLFANNMNNFLDDSPVQ 278

Query: 298 RVKEASISV 307
           RVKE  + +
Sbjct: 279 RVKEVRLEL 280

[Close]
BLAST of Spg033009 vs. NCBI nr
Match: XP_022151375.1 (ubiquitin carboxyl-terminal hydrolase 8-like [Momordica charantia])

HSP 1 Score: 178.3 bits (451), Expect = 1.1e-40
Identity = 93/129 (72.09%), Postives = 104/129 (80.62%), Query Frame = 0 

Query: 178 GRAFDLKGIVEFLEGLKDLVRNFGRHYEVKATSNYAGRHFRAEETLQDVFPLQIRILVSS 237
           GR F L G   +L+ LK       RH +  ATSN+AGR F+AE+TLQDVF LQIRI VS 
Sbjct: 142 GREFALIGEAMWLQALK-------RHNDYNATSNFAGRLFKAEDTLQDVFSLQIRIFVSW 201

Query: 238 ETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSGQTNQLFTNNMNNFLDDSPIQ 297
           ET+LLTVKINRKDN+ADFYKRASIIFNSNSELFHIWDFSGQTNQLFTNNMNN LDDSP+Q
Sbjct: 202 ETNLLTVKINRKDNVADFYKRASIIFNSNSELFHIWDFSGQTNQLFTNNMNNLLDDSPVQ 261

Query: 298 RVKEASISV 307
           RVKE  + +
Sbjct: 262 RVKEVLLEL 263

[Close]
BLAST of Spg033009 vs. ExPASy Swiss-Prot
Match: Q9C585 (Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana OX=3702 GN=UBP8 PE=2 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 8.6e-09
Identity = 31/68 (45.59%), Postives = 46/68 (67.65%), Query Frame = 0 

Query: 225 DVFPLQIRILVSSETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSGQTNQLFT 284
           DV+P+Q+R+ V  ET+ L VKI +KDN  + ++RA  IF+ +SE   IWD SGQT   F 
Sbjct: 139 DVYPVQLRLSVLQETNSLAVKICKKDNSVECFRRACKIFSLDSEQLRIWDISGQTTLFFE 198

Query: 285 NNMNNFLD 293
           ++++N  D
Sbjct: 199 SDVSNSKD 206

[Close]
BLAST of Spg033009 vs. ExPASy Swiss-Prot
Match: O22207 (Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis thaliana OX=3702 GN=UBP5 PE=1 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 2.6e-05
Identity = 23/86 (26.74%), Postives = 52/86 (60.47%), Query Frame = 0 

Query: 221 ETLQDVFPLQIRILVSSETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSGQTN 280
           E   +V+PL++++L+  ++    ++I++K+ + + ++RA  IF+ +SE   IWD+ G   
Sbjct: 152 ELAVEVYPLRLQLLLMPKSDHSAIRISKKETIRELHRRACEIFDLDSEHVRIWDYYGHQK 211

Query: 281 QLFTNNMNNFLDDSPIQRVKEASISV 307
               N+++  LDD+ +Q  ++  + V
Sbjct: 212 YSLMNDLDKTLDDANLQMDQDILVEV 237

[Close]
BLAST of Spg033009 vs. ExPASy TrEMBL
Match: A0A6J1L2W6 (Ubiquitin carboxyl-terminal hydrolase OS=Cucurbita maxima OX=3661 GN=LOC111498623 PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 2.3e-41
Identity = 94/129 (72.87%), Postives = 104/129 (80.62%), Query Frame = 0 

Query: 178 GRAFDLKGIVEFLEGLKDLVRNFGRHYEVKATSNYAGRHFRAEETLQDVFPLQIRILVSS 237
           GR + L G   +L+ LK       RH +VK TSNYAGR FR EETLQDVFPLQIRILVS 
Sbjct: 159 GREYALIGEALWLQALK-------RHSDVKTTSNYAGRLFRDEETLQDVFPLQIRILVSW 218

Query: 238 ETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSGQTNQLFTNNMNNFLDDSPIQ 297
           ET+LL VKINRKDNLAD+YKRASIIFNS+SE FHIWDFSGQTNQLF NNMNNFLDDSP+Q
Sbjct: 219 ETNLLAVKINRKDNLADYYKRASIIFNSSSEPFHIWDFSGQTNQLFANNMNNFLDDSPVQ 278

Query: 298 RVKEASISV 307
           RVKE  + +
Sbjct: 279 RVKEVRLEL 280

[Close]
BLAST of Spg033009 vs. ExPASy TrEMBL
Match: A0A6J1EYY5 (Ubiquitin carboxyl-terminal hydrolase OS=Cucurbita moschata OX=3662 GN=LOC111437462 PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 2.3e-41
Identity = 94/129 (72.87%), Postives = 104/129 (80.62%), Query Frame = 0 

Query: 178 GRAFDLKGIVEFLEGLKDLVRNFGRHYEVKATSNYAGRHFRAEETLQDVFPLQIRILVSS 237
           GR + L G   +L+ LK       RH +VK TSNYAGR FR EETLQDVFPLQIRILVS 
Sbjct: 159 GREYALIGEALWLQALK-------RHSDVKTTSNYAGRLFRDEETLQDVFPLQIRILVSW 218

Query: 238 ETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSGQTNQLFTNNMNNFLDDSPIQ 297
           ET+LL VKINRKDNLAD+YKRASIIFNS+SE FHIWDFSGQTNQLF NNMNNFLDDSP+Q
Sbjct: 219 ETNLLAVKINRKDNLADYYKRASIIFNSSSEPFHIWDFSGQTNQLFANNMNNFLDDSPVQ 278

Query: 298 RVKEASISV 307
           RVKE  + +
Sbjct: 279 RVKEVRLEL 280

[Close]
BLAST of Spg033009 vs. ExPASy TrEMBL
Match: A0A6J1DB01 (Ubiquitin carboxyl-terminal hydrolase OS=Momordica charantia OX=3673 GN=LOC111019329 PE=3 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 5.2e-41
Identity = 93/129 (72.09%), Postives = 104/129 (80.62%), Query Frame = 0 

Query: 178 GRAFDLKGIVEFLEGLKDLVRNFGRHYEVKATSNYAGRHFRAEETLQDVFPLQIRILVSS 237
           GR F L G   +L+ LK       RH +  ATSN+AGR F+AE+TLQDVF LQIRI VS 
Sbjct: 142 GREFALIGEAMWLQALK-------RHNDYNATSNFAGRLFKAEDTLQDVFSLQIRIFVSW 201

Query: 238 ETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSGQTNQLFTNNMNNFLDDSPIQ 297
           ET+LLTVKINRKDN+ADFYKRASIIFNSNSELFHIWDFSGQTNQLFTNNMNN LDDSP+Q
Sbjct: 202 ETNLLTVKINRKDNVADFYKRASIIFNSNSELFHIWDFSGQTNQLFTNNMNNLLDDSPVQ 261

Query: 298 RVKEASISV 307
           RVKE  + +
Sbjct: 262 RVKEVLLEL 263

[Close]
BLAST of Spg033009 vs. ExPASy TrEMBL
Match: A0A0A0LGU4 (Ubiquitin carboxyl-terminal hydrolase OS=Cucumis sativus OX=3659 GN=Csa_3G782780 PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.1e-35
Identity = 86/129 (66.67%), Postives = 99/129 (76.74%), Query Frame = 0 

Query: 178 GRAFDLKGIVEFLEGLKDLVRNFGRHYEVKATSNYAGRHFRAEETLQDVFPLQIRILVSS 237
           GR + L G   +L+ LK       RH + +ATSNY GR FR E+ LQ VFPLQIRILVS 
Sbjct: 163 GREYALIGESMWLQALK-------RHNDFEATSNYGGRLFRDEDILQAVFPLQIRILVSW 222

Query: 238 ETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSGQTNQLFTNNMNNFLDDSPIQ 297
           ET+LLTVKINRKDN A+FYKRAS+IFNSNSELFHIWDFSGQTN+LFTNN NNFLD S +Q
Sbjct: 223 ETNLLTVKINRKDNSANFYKRASVIFNSNSELFHIWDFSGQTNKLFTNNSNNFLDGSLVQ 282

Query: 298 RVKEASISV 307
            VKE  + +
Sbjct: 283 GVKEVLLEL 284

[Close]
BLAST of Spg033009 vs. ExPASy TrEMBL
Match: A0A5A7TQX4 (Ubiquitin carboxyl-terminal hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G001270 PE=3 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.2e-34
Identity = 87/136 (63.97%), Postives = 101/136 (74.26%), Query Frame = 0 

Query: 178 GRAFDLKGIVEFLEGLKDLVRNFGRHYEVKATSNYAGRHFRAEETLQDVFPLQIRILVSS 237
           GR + L G   +L+ LK       RH + ++TSNY GR FR E+  Q VFPLQIRILVS 
Sbjct: 99  GREYALIGESMWLQALK-------RHNDFESTSNYGGRLFRDEDISQAVFPLQIRILVSW 158

Query: 238 ETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSGQTNQLFTNNMNNFLDDSPIQ 297
           ET+LLTVKINRKDN A+FYKRAS+IFNSNSELFHIWDFSGQTN+LFTNN NNFLD S +Q
Sbjct: 159 ETNLLTVKINRKDNSANFYKRASVIFNSNSELFHIWDFSGQTNKLFTNNSNNFLDGSLVQ 218

Query: 298 RVKEA--SISVSEQLE 312
            VKE    + V E L+
Sbjct: 219 GVKEVLLELQVHETLD 227

[Close]
BLAST of Spg033009 vs. TAIR 10
Match: AT2G40930.1 (ubiquitin-specific protease 5 )

HSP 1 Score: 51.2 bits (121), Expect = 1.8e-06
Identity = 23/86 (26.74%), Postives = 52/86 (60.47%), Query Frame = 0 

Query: 221 ETLQDVFPLQIRILVSSETSLLTVKINRKDNLADFYKRASIIFNSNSELFHIWDFSGQTN 280
           E   +V+PL++++L+  ++    ++I++K+ + + ++RA  IF+ +SE   IWD+ G   
Sbjct: 152 ELAVEVYPLRLQLLLMPKSDHSAIRISKKETIRELHRRACEIFDLDSEHVRIWDYYGHQK 211

Query: 281 QLFTNNMNNFLDDSPIQRVKEASISV 307
               N+++  LDD+ +Q  ++  + V
Sbjct: 212 YSLMNDLDKTLDDANLQMDQDILVEV 237

The following BLAST results are available for this feature:
BLAST of Spg033009 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022931260.14.8e-4172.87ubiquitin carboxyl-terminal hydrolase 8-like [Cucurbita moschata][more]
XP_023005698.14.8e-4172.87ubiquitin carboxyl-terminal hydrolase 8-like [Cucurbita maxima][more]
KAG6596631.18.2e-4172.87Ubiquitin carboxyl-terminal hydrolase 8, partial [Cucurbita argyrosperma subsp. ... [more]
KAG7028168.18.2e-4172.87Ubiquitin carboxyl-terminal hydrolase 8 [Cucurbita argyrosperma subsp. argyrospe... [more]
XP_022151375.11.1e-4072.09ubiquitin carboxyl-terminal hydrolase 8-like [Momordica charantia][more]
BLAST of Spg033009 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9C5858.6e-0945.59Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana OX=3702 GN=UBP8 ... [more]
O222072.6e-0526.74Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis thaliana OX=3702 GN=UBP5 ... [more]
BLAST of Spg033009 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1L2W62.3e-4172.87Ubiquitin carboxyl-terminal hydrolase OS=Cucurbita maxima OX=3661 GN=LOC11149862... [more]
A0A6J1EYY52.3e-4172.87Ubiquitin carboxyl-terminal hydrolase OS=Cucurbita moschata OX=3662 GN=LOC111437... [more]
A0A6J1DB015.2e-4172.09Ubiquitin carboxyl-terminal hydrolase OS=Momordica charantia OX=3673 GN=LOC11101... [more]
A0A0A0LGU41.1e-3566.67Ubiquitin carboxyl-terminal hydrolase OS=Cucumis sativus OX=3659 GN=Csa_3G782780... [more]
A0A5A7TQX41.2e-3463.97Ubiquitin carboxyl-terminal hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
BLAST of Spg033009 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G40930.11.8e-0626.74ubiquitin-specific protease 5 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR21646:SF59UBIQUITIN CARBOXYL-TERMINAL HYDROLASEcoord: 198..302
NoneNo IPR availablePANTHERPTHR21646UBIQUITIN CARBOXYL-TERMINAL HYDROLASEcoord: 198..302
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..30
score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg033009.1Spg033009.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016579 protein deubiquitination
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
molecular_function GO:0004843 thiol-dependent deubiquitinase