Spg032922 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg032922
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA-(apurinic or apyrimidinic site) endonuclease
Locationscaffold11: 15791631 .. 15798792 (+)
RNA-Seq ExpressionSpg032922
SyntenySpg032922
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGACCACCTACCTAGGATATTTAATATCCTACGAGTTTCCTTGGCAACCAAATGTAGTAGGGTCAGGCGGTTGTCCCGTGAGATTAGTCGAGGTGCGCGTAAGTTGGCCCGGACACTCACGGATATCAAAAAAAAAAAAAATCAATATAGTGTCTCACAATCTTTTTGTCATCCTTCCTTTGGAAGAAGGGATGTCTTATCTCTTTGTCCCCTAGGTTGTTTTGTTTGGCTTGTAGCCTCCTTGAATGCAAGTTTGTTTCGTTTTTTTTTTTTTAAAAAAAAATCTTGTAATTAATCCCAAAAGCCCCTTCACATAGCCTATGTTTGTAAACTCTGAAGGCTAGGTTGCCCTAAATGTTACTAAAGCACTTTTTAATTCAAGTCCAGAGTTATGCAGAAGGGTGGAAATTTTAAGTTTTGAATTGTTTGTTTAGCTATAGTTATCATTCATCAGTATGCGCATGCTATAATATAAATAATGTTATATTTTCTTTCCCTATAAACTGGACTTGAGTTTTGCATGTCAATTTTGCTACAGGAGAAGGACATACTACAAATTGAAAAGTCTCTTATGGATGGATATCATTATACCTATTGGACGTGCAGTGTTTCTAAACTTGGTTATTCAGGAACAGCAATCATATCCCGGGTATGATTTTCCTTTTCTCACATATGGACAAAAAATTCCTGTACAAGAAAGAAAAGAAGTAAAGAAACTTGTCAGCTTGATGATCTAAGATGTGCATAGAATGGATCAAGTCTTGGATTCTACTTGTGTGGTCACCTATTTAGGATATTAATATTGTATAAATTATTTGACTCTGAGAGTTGAAAGTTAGTGAGACAAAATCAGTCTTGCAAGTTTTGGCTGTATTGAGAGAGGAAGAGTTGTCGGTCTTTATTACATAAAGTGCATTTCAATGTCGACCAAGGAATTTTATGATTTTATTTTATTTTTTTATTATTATTTTTTATTGTTCTTTTGAGAACATGCTTTTGTTTGATATGCTTGTAAAACTTGGAGACTGAGTCTATATATTATCAAATTAGACAAAATTATCACTTGCTGAATGTCGAATGAGTTAATTGTTATAACTTTTGCCTAGTGTGGTTGGTCTGATGAGAAAAAAGCAAATTGTAAACTCAAAATGCTTTTGAGGCAGTTCTTGCTTCTTGGGAGCTATCTATTTAAGCTACTCAACAGCCTATGAGTTTCTTGATTCTTTAAGTTGCGGAGCTAGGTAGTTATCTTGTAGGACAAGGTGATAGTTTTGTAGGTTGTTAATTTAGGTTCAAGTAAGTAATCTCAGCTGAGTTATGAAATGACACATATTGGTACCCGTTTCTTTTGATGCAGCTCTTTACTTCATCATTATTTATAACTTAAATCTTGCAAGCTTCTAAAAATACTATTGCAGTGCAAAAGCTACTATTGTCCGTCAACGCTTGTAGTTACTGCCATCATATTATGTATTTCATAATGGTTCCTTTTAGTTTGCTGACTAAAGATGTCTTACAGATGCAGCCAATTTCAGTCCGATATGGTTTAGGCGTATCAGAACATGATGGTGAAGGGCGGCTTGTGATGGTGGAGTTTGAATCATTTTTTTTATTGAACGTTTATGTTCCTAATTCTGGAGATGGATTAAAGCGACTGGTATTGAGTTCCCAACTATGGTTCTTTATTCTAGCCTGATTTATTTCATAGTAACATGAATTATTGATATATTTTGGTCTTAGATTTTAGTGTGAAGCAACATGAATTATTGATATATTTTGGTCTTAGATTTTAGTGTGAAGCCTCTTCTTGCACTGATATCTCTGATTTTACTTGTAGTCATACAGGATTACCCAATGGGATCCATCTCTCAGTAACTATATGAAGGTACATATGAATTATTATTCTTTTATTTTAGGGCAAAATACACTTTTGGTTCATAAGGTTTGAGTTTAGTGTCTGTTTGGTCCTTGAGGTTTTAAATGGGACATTTTAGTCCTGAGGTTTAGTGTGTGTGTGTGGGGGGGGGGGGGGGGGGGAGTTGGCTTTCTTAAAAATTTAATAATATTTTTTCTTTTTCTCTTTTCTTTTTCTTCCTTTACCAAGTCGCTGCCACCCGCTGCACTTCTCCTCTCTCAACGCTGCTGTTAGTTTCTCCCTATCACTGTTATTGAAGGTATCTGGAAGGAAGGAAGCCAGATTTGGAACTCTTCCATTCCATATTTGAAACTCTGAAACAAAAGAATTTCCTTCTACCTGTTCATCTTCAGACCGAAAACCGACACGACCGACCGAACCGACGATGGTCGGTCGGCGTTGGTTCTTACATTGGGGAGACCGATCAGTCGGTCGGTCGGCCAAACAATTTTACACATAACCGACTGATATATTTATATATATAAAAATATAATTTTTTTTAAAAAAAGACATAACCGACCGACCGACCGATTTTACACATAACCGACCGATCGCCGTTCTTCATCTCAGTTCTCGTGACCTTAAAAAAAAACCGACTGAACCGACCGACCGAAACCGACTGGTCGGTCGGTCGGCTGGCAGCACCCATCGGAAGTCGTCGGATCCAGATTTCTGAAAAACCGACCGACGGTCGGTGTCGGTTTTCCCCCAAAACCGACACCGACCAACCGATGAACACCCCTATTTCCTTCGTTCCAGAACAAAGTGATATGAACAAATCCATGGCTAATCACTAACTTTGTAAGAAGATGACATTTGACTGGTAATTTCCCTAACCCTAATCACTAACTTTTTTTTTTTCCTTTAATTTATCTAATTACATCATAAAAAATAATCCCTCACCTTCCTGGAGGTTTGTTTGTCAATTAATTTAAATGAATCAAGTTTGATTTTGCAAGTTCCTTGAGTCTGACCCATGGCCCGTGAAATCGAGATAGCACTCTCGACGGAAACTTGACTGTGCCTCCTCTATTGTCGGCTCCTCCCAAGAGTTCCAATGAAAACAAGACGCCTCTGGTGATTCCATCCCGATCAAATCGTTTGAATCGGAGGGATTTGTGAAAGAATTCCAAATCTGGATTTCTTGTTGTTGTAAAGAATTGGAGATCCACCTTTGACCATTTCTTGAAGCTTGAAAATGACTTGTTGATCGGGGACGACGAAGAAATTCTCGGTGATGGTGAAATCATGCATCATGGTCAAAATTTTAACAGGGATTTCGACATTTGGGATTTGATCACGTAACTTTGTTTGGGGGAAGGAGGAGAAGGAAGAAGAAGAAAGAAAGGTTGGAGAAAGGAAGAAAGAGAAAACGTTAAATCACCAAAAAAAAGTTTATTAAATTATAATTTTGTCAACTCAATCGTGTACAAACATCGACTTAATTGTCATGTCATTTTCCATTAATCAACTATTAGTTCAGGGCCATTTAGAATAATTTTCTAAACCTTAGGGACTAAAATGTCTCTTTTGAATCTCAAGGACCAAATAGACGCTAAACCCAAACCTTAGGAAACAAAAATGTATTTTGCCCTACAATTTATTTCTTTATTATTCCTAATTTTCTTAGTTAGGTTGAGTTTGAGATGACTTTTGGAATGGTGAAAAGTACTCTTAGCTAATTAAAAGCCTCCTTCAAATTTTTTCAATATTTGGTCAGATAATCTGTAAGGGTATTGGTATGGTATATATGGGGATTGGTAGTAGTATGGTAGTATGGGTATAATAGTGAATAGCTAGGGAGCCTTGGGTGTGGCTTGGTTATAAATAGGGTAGTTTATGGAGTCTTTAGGGTGTGGAGAATTTTGGTAGTGTCCATTGTGAGACTCTTGGGAGAGAGATAGCCCTCTCGAAAGGCTATTGGTATATGTAAGGGTATTAGTATGGTATATATGGGGATTAGTAGTAGTATGGTAGTATGGGTATAATAGTAAATAGCTAGGGAGCCTTGGGTGTGCCTTGGTTATAAATAGGGTAGTTTATGGAGTCTTTAGGGTGTGGAGAATTTTGGTAGTGTCCATTGTGGGACTCTTGGGAGAGAGATAGCCCTCTCGAAAGGCTATTGGTATATTGTAACGTCATTTTGATATTGCAATATAATATATCAGTGTTTGGTATCTTTTCTTAGTTTGGATTCCTAACATAATCATGAGTAATTTTGAAAATTATAAAAACACAAAAAGTGCTTTTTGGGAAAGACGTGCATGTTTGGGAGTGATTTTGAAATGATTAAAACCACTTCTTTCAAATTTTAAATCACTCCGAAACATGCTTTTAATAATTCAAAATCAATTTTGATGATATGAAAATTATCTTTAAAAGTGTAAAATTAAACATGAAATTGATTTTGAATAATTAAAGGTATGTTTCGAGATGATTTCGAATATGACAAAAGTGATTTTAGTCATTTCAAAATCACTCCCAAACATGTCAATGTTTCTTCTAAAAGTTGTTTTAAAAGTTCTTTTGCTTCACAAAACTTTGTTTAAGAGTCATCTCAATTTCACCTCTAAAAAGCACTTTGATATCCAAGCTTTTGATGAAGCAAGAATCCTTGAATCAAATAAATAAATACCTCATGCAAAATTTTGATCAACCAAGAGACAAAGTTAGAATTAGATTACCCTTTAAAGATCAAAGATCTAGAAGCAAGATTTGGAAATCTAGTTCTAGGTTGAGTCACTCCACAATCAAACTTGATCAAGGCTAGATTGAATGGCTCGGATGCAATCTATCACGAGATTGTAAGAAAACTTAGAAATGACAAAGGTATGATGCTCGGATTTCTAAGGAAAGGTGTCAATCTTGAGAGATCAATTTTTCATTCAACAAATTCTAATTTTGACATGGTTAGGTTGTGGCTATCTTAGTCTTTTAGTAAAAGAAATCCCCAATCCTTTAATGCAAAAAATGGCTACCACAGTTGGCCAATATGGTAACTAACTCCCAACAATTAGTGCCTCAACTTTGAAACTGAAATTTTCGAAATCAAGAGTTCATGAAACTTCAAATGATAAATGAAGTCTCAAAGTGCTTGCCCAACTCAAGTGAACTTAATAGCAAATTCATACTCAACTTCAACCTTGCATACATTTACCTCCAAAGCTCCTTCCTCTCTTGGATTAGTTTGTAGCACATGATATAGAGGTTGAACTAAGCCTATCCAATTTGGTAAGTGAAGAATGAATGCTTGTTGAATCTTCTTAGCCTTGGATTATGTAATAGGTCCGATTGTAACGTGTGAAACACCATGATTCTTATCACACTAAAGTGCTTTTAAAGAACCACTTAATTAAAACACTTATTCTAAATGTGTTGTATAACCACTACTCTCAAAGTCGACCTACATTTATCCAAAGAATGCTATGATATCTTGTAGGATGTGTTCAATTTGCAAGAGTAGTTAGAACTTAGAAGAATAGTAGTCAGCACTAAAAATTAATATGCTTGAATTTGAAGTTGGTCTAAACTTTAAGGAGTGACTGCCCATTGCCCAACCTGAAAACTTGTATTATGATACTATTTTGTAGGTCTTTATTGTTGGGCATGGGATAGTTTCATATAGCTTGGACCCCATTTGATAACCATTTGGTTTTTGAAAATTAGGCTTGTTTTCTTCCAATTTCCTTACAATTATTTTCATGTTTGTTAAGGTCACATTTGAATTCCTAGCCAAATTCCAAATTCCAAAAACAAACTATTTTTTTTAGTTTTCAAAAATTGACTTGGTTTTTGAAAACATGGGAAGAATGTGGATTAGAAAACAAGGAGAATAGAAGTAGTGTTTATAAGCTTAAATTTCAAAAATCAAAAACCAAAAACAAAATGCTTATCAAATGAGACCTTAAAAACCAATTGCCAATTTCAATGGAAGAAATGTAAACTTACTTGCAGATTTTCCCACATCAGGATTCTTTTCCTAATGTTTGTATTAATATTGGTAACAACTTGTGCAGGAGTTGGAAAAGTTGAAGCCTGTGATTTTGACTGGTGATCTGAATTGTGCTCATGAAGAGATAGACATCTATAATCCTGCAGTAAGTGATGAAATTTAGTTCTGACTTTCTCCCCCTTATTGTATCTGAACCGTAAAAAGTGTACCTAAAATGAAAATTTTGTGAAGGCGACACAGCTTCGTTCAAACTCATTAAAGCATAGTGTGCTTTGTTCAATTAGCTTTTGGTTGCATTTTCCGATTTAATGGATATTTGTGCTTGGATTGTATAGGGAAACCGAAAAAGTGCTGGTTTCACAGATGAAGAAAGGCAATCCTTCGAGACCAACTATTTGGAAAGGGGGTTTGTAGATACATTTAGACAAAAACACCCTGATGTTGTTGGCTATACATATTGGGGTTATCGTCATGGTGGACGCAAAACCAACAAAGGTTACTCAATCTGCTTCTTTTTTTTATTTCTTATCTATCTGTTCTTTCCTTTGCTCAGCTCTACTAAAATTCAGCAGCCTATTTGAAACGTGTGATGATGCTATGGGACACCTCAACTATTTGAGTAAATTATGGGAACTTGCCAGGCTAGTGTCCATAGATGAATCATTTTCTCTAAACATTTTTTTAGAAAAACACAAATAAGTACTGCCTTTGAACACACTAGAAATGTTTTTAGAATTTTTAAAAGCTTGTAATTTGGAAAGTGTTTTTAATTAGTTAAAGTACTTTTCACCCTTGTATATTTCTTGGATAGTGATTTGTTGGTCAATGTTACTTGAACTCTCTTTGATAGAGTTTTTCAATGAGGGAAGGCTTTTCGGCGGTATCCATTTCTGTTATCACTTTTGAGCTCAAAATTTTGTGGTGTGTTTTGAGTTTTGTGTGATGGTAAGACGTAAGTTTTTGTTAAACAGGATGGCGGCTCGACTATTTTCTTGTATCGGAAACGATAGCAGGGAAGGTGCATGACTCTTACATACTCCCTGATGTGGGGGGCAGTGATCATTGTCCAATTGGCCTTGTTCTCAAGCTGTAGCTTTCCTTTTGTGCATACCCAACTCAACCTCCAACTTTGTGAACCCATATTTTCGAGGGCTCGTTTTGGCAATGAATTTTGTATTTGGACTTTGTGTTGTAATGTCATTCTGATTGACTTCCTCTTTCGAAGAATTCTTTGGACTTTGTGTTGTAATGTCATTCTGATTGACTTCCTCTTTCGAAGAATTCTCTTTGA

mRNA sequence

ATGGTGACCACCTACCTAGGATATTTAATATCCTACGAGTTTCCTTGGCAACCAAATGTAGTAGGGTCAGGCGGTTGTCCCGAGAAGGACATACTACAAATTGAAAAGTCTCTTATGGATGGATATCATTATACCTATTGGACGTGCAGTGTTTCTAAACTTGGTTATTCAGGAACAGCAATCATATCCCGGATGCAGCCAATTTCAGTCCGATATGGTTTAGGCGTATCAGAACATGATGGTGAAGGGCGGCTTGTGATGGTGGAGTTTGAATCATTTTTTTTATTGAACGTTTATGTTCCTAATTCTGGAGATGGATTAAAGCGACTGTCATACAGGATTACCCAATGGGATCCATCTCTCAGTAACTATATGAAGGAGTTGGAAAAGTTGAAGCCTGTGATTTTGACTGGTGATCTGAATTGTGCTCATGAAGAGATAGACATCTATAATCCTGCAGGAAACCGAAAAAGTGCTGGTTTCACAGATGAAGAAAGGCAATCCTTCGAGACCAACTATTTGGAAAGGGGGTTTGTAGATACATTTAGACAAAAACACCCTGATGTTGTTGGCTATACATATTGGGGTTATCGTCATGGTGGACGCAAAACCAACAAAGGATGGCGGCTCGACTATTTTCTTGTATCGGAAACGATAGCAGGGAAGGTGCATGACTCTTACATACTCCCTGATGTGGGGGGCAGTGATCATTGTCCAATTGGCCTTGTTCTCAAGCTGTAG

Coding sequence (CDS)

ATGGTGACCACCTACCTAGGATATTTAATATCCTACGAGTTTCCTTGGCAACCAAATGTAGTAGGGTCAGGCGGTTGTCCCGAGAAGGACATACTACAAATTGAAAAGTCTCTTATGGATGGATATCATTATACCTATTGGACGTGCAGTGTTTCTAAACTTGGTTATTCAGGAACAGCAATCATATCCCGGATGCAGCCAATTTCAGTCCGATATGGTTTAGGCGTATCAGAACATGATGGTGAAGGGCGGCTTGTGATGGTGGAGTTTGAATCATTTTTTTTATTGAACGTTTATGTTCCTAATTCTGGAGATGGATTAAAGCGACTGTCATACAGGATTACCCAATGGGATCCATCTCTCAGTAACTATATGAAGGAGTTGGAAAAGTTGAAGCCTGTGATTTTGACTGGTGATCTGAATTGTGCTCATGAAGAGATAGACATCTATAATCCTGCAGGAAACCGAAAAAGTGCTGGTTTCACAGATGAAGAAAGGCAATCCTTCGAGACCAACTATTTGGAAAGGGGGTTTGTAGATACATTTAGACAAAAACACCCTGATGTTGTTGGCTATACATATTGGGGTTATCGTCATGGTGGACGCAAAACCAACAAAGGATGGCGGCTCGACTATTTTCTTGTATCGGAAACGATAGCAGGGAAGGTGCATGACTCTTACATACTCCCTGATGTGGGGGGCAGTGATCATTGTCCAATTGGCCTTGTTCTCAAGCTGTAG

Protein sequence

MVTTYLGYLISYEFPWQPNVVGSGGCPEKDILQIEKSLMDGYHYTYWTCSVSKLGYSGTAIISRMQPISVRYGLGVSEHDGEGRLVMVEFESFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYMKELEKLKPVILTGDLNCAHEEIDIYNPAGNRKSAGFTDEERQSFETNYLERGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKGWRLDYFLVSETIAGKVHDSYILPDVGGSDHCPIGLVLKL
Homology
[Close]
BLAST of Spg032922 vs. NCBI nr
Match: XP_022949944.1 (DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X2 [Cucurbita moschata] >XP_022949952.1 DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X2 [Cucurbita moschata] >XP_022949960.1 DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X2 [Cucurbita moschata] >XP_022949968.1 DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X2 [Cucurbita moschata])

HSP 1 Score: 440.7 bits (1132), Expect = 8.6e-120
Identity = 202/219 (92.24%), Postives = 215/219 (98.17%), Query Frame = 0 

Query: 28  EKDILQIEKSLMDGYHYTYWTCSVSKLGYSGTAIISRMQPISVRYGLGVSEHDGEGRLVM 87
           EKD+L+I+ SLMDGYHYTYWTCSVSKLGYSGTAIISR++PISVRYG+G+SEHD EGRLVM
Sbjct: 245 EKDVLEIKNSLMDGYHYTYWTCSVSKLGYSGTAIISRIEPISVRYGVGISEHDSEGRLVM 304

Query: 88  VEFESFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYMKELEKLKPVILTGDLNCAHEEI 147
           VEFESF+LLNVYVPNSGDGLKRLSYRITQWDPSLSNYMKELEKLKPVILTGDLNCAH+EI
Sbjct: 305 VEFESFYLLNVYVPNSGDGLKRLSYRITQWDPSLSNYMKELEKLKPVILTGDLNCAHQEI 364

Query: 148 DIYNPAGNRKSAGFTDEERQSFETNYLERGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG 207
           DIYNPAGNRKSAGFTDEERQSFET+YLE+GFVDTFRQKHPDVVGYTYWGYRHGGRKTN+G
Sbjct: 365 DIYNPAGNRKSAGFTDEERQSFETSYLEKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNRG 424

Query: 208 WRLDYFLVSETIAGKVHDSYILPDVGGSDHCPIGLVLKL 247
           WRLDYFLVS TIA KVH+SYILPDVGGSDHCPIGLVLKL
Sbjct: 425 WRLDYFLVSGTIAEKVHESYILPDVGGSDHCPIGLVLKL 463

[Close]
BLAST of Spg032922 vs. NCBI nr
Match: XP_022949935.1 (DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 440.7 bits (1132), Expect = 8.6e-120
Identity = 202/219 (92.24%), Postives = 215/219 (98.17%), Query Frame = 0 

Query: 28  EKDILQIEKSLMDGYHYTYWTCSVSKLGYSGTAIISRMQPISVRYGLGVSEHDGEGRLVM 87
           EKD+L+I+ SLMDGYHYTYWTCSVSKLGYSGTAIISR++PISVRYG+G+SEHD EGRLVM
Sbjct: 282 EKDVLEIKNSLMDGYHYTYWTCSVSKLGYSGTAIISRIEPISVRYGVGISEHDSEGRLVM 341

Query: 88  VEFESFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYMKELEKLKPVILTGDLNCAHEEI 147
           VEFESF+LLNVYVPNSGDGLKRLSYRITQWDPSLSNYMKELEKLKPVILTGDLNCAH+EI
Sbjct: 342 VEFESFYLLNVYVPNSGDGLKRLSYRITQWDPSLSNYMKELEKLKPVILTGDLNCAHQEI 401

Query: 148 DIYNPAGNRKSAGFTDEERQSFETNYLERGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG 207
           DIYNPAGNRKSAGFTDEERQSFET+YLE+GFVDTFRQKHPDVVGYTYWGYRHGGRKTN+G
Sbjct: 402 DIYNPAGNRKSAGFTDEERQSFETSYLEKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNRG 461

Query: 208 WRLDYFLVSETIAGKVHDSYILPDVGGSDHCPIGLVLKL 247
           WRLDYFLVS TIA KVH+SYILPDVGGSDHCPIGLVLKL
Sbjct: 462 WRLDYFLVSGTIAEKVHESYILPDVGGSDHCPIGLVLKL 500

[Close]
BLAST of Spg032922 vs. NCBI nr
Match: XP_016899623.1 (PREDICTED: DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X3 [Cucumis melo])

HSP 1 Score: 439.5 bits (1129), Expect = 1.9e-119
Identity = 203/219 (92.69%), Postives = 214/219 (97.72%), Query Frame = 0 

Query: 28  EKDILQIEKSLMDGYHYTYWTCSVSKLGYSGTAIISRMQPISVRYGLGVSEHDGEGRLVM 87
           EKDIL I KSLMDGYHYTYWTCSVSKLGYSGTAIISR++PISVRYGLG+SEHDGEGR+VM
Sbjct: 249 EKDILTITKSLMDGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM 308

Query: 88  VEFESFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYMKELEKLKPVILTGDLNCAHEEI 147
           VEF+SFFLLNVYVPNSGDGLKRLSYRIT+WDPSLSNYMKELEKLKPVILTGDLNCAH+EI
Sbjct: 309 VEFDSFFLLNVYVPNSGDGLKRLSYRITEWDPSLSNYMKELEKLKPVILTGDLNCAHQEI 368

Query: 148 DIYNPAGNRKSAGFTDEERQSFETNYLERGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG 207
           DIYNPAGNRKSAGFT EERQSFETN+LE+GFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG
Sbjct: 369 DIYNPAGNRKSAGFTIEERQSFETNFLEKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG 428

Query: 208 WRLDYFLVSETIAGKVHDSYILPDVGGSDHCPIGLVLKL 247
           WRLDYFLVS+ +A KVHDSYILPDVGGSDHCPIGLVLKL
Sbjct: 429 WRLDYFLVSDRMAEKVHDSYILPDVGGSDHCPIGLVLKL 467

[Close]
BLAST of Spg032922 vs. NCBI nr
Match: XP_008443352.1 (PREDICTED: DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 439.5 bits (1129), Expect = 1.9e-119
Identity = 203/219 (92.69%), Postives = 214/219 (97.72%), Query Frame = 0 

Query: 28  EKDILQIEKSLMDGYHYTYWTCSVSKLGYSGTAIISRMQPISVRYGLGVSEHDGEGRLVM 87
           EKDIL I KSLMDGYHYTYWTCSVSKLGYSGTAIISR++PISVRYGLG+SEHDGEGR+VM
Sbjct: 297 EKDILTITKSLMDGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM 356

Query: 88  VEFESFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYMKELEKLKPVILTGDLNCAHEEI 147
           VEF+SFFLLNVYVPNSGDGLKRLSYRIT+WDPSLSNYMKELEKLKPVILTGDLNCAH+EI
Sbjct: 357 VEFDSFFLLNVYVPNSGDGLKRLSYRITEWDPSLSNYMKELEKLKPVILTGDLNCAHQEI 416

Query: 148 DIYNPAGNRKSAGFTDEERQSFETNYLERGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG 207
           DIYNPAGNRKSAGFT EERQSFETN+LE+GFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG
Sbjct: 417 DIYNPAGNRKSAGFTIEERQSFETNFLEKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG 476

Query: 208 WRLDYFLVSETIAGKVHDSYILPDVGGSDHCPIGLVLKL 247
           WRLDYFLVS+ +A KVHDSYILPDVGGSDHCPIGLVLKL
Sbjct: 477 WRLDYFLVSDRMAEKVHDSYILPDVGGSDHCPIGLVLKL 515

[Close]
BLAST of Spg032922 vs. NCBI nr
Match: XP_008443353.1 (PREDICTED: DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 439.5 bits (1129), Expect = 1.9e-119
Identity = 203/219 (92.69%), Postives = 214/219 (97.72%), Query Frame = 0 

Query: 28  EKDILQIEKSLMDGYHYTYWTCSVSKLGYSGTAIISRMQPISVRYGLGVSEHDGEGRLVM 87
           EKDIL I KSLMDGYHYTYWTCSVSKLGYSGTAIISR++PISVRYGLG+SEHDGEGR+VM
Sbjct: 296 EKDILTITKSLMDGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM 355

Query: 88  VEFESFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYMKELEKLKPVILTGDLNCAHEEI 147
           VEF+SFFLLNVYVPNSGDGLKRLSYRIT+WDPSLSNYMKELEKLKPVILTGDLNCAH+EI
Sbjct: 356 VEFDSFFLLNVYVPNSGDGLKRLSYRITEWDPSLSNYMKELEKLKPVILTGDLNCAHQEI 415

Query: 148 DIYNPAGNRKSAGFTDEERQSFETNYLERGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG 207
           DIYNPAGNRKSAGFT EERQSFETN+LE+GFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG
Sbjct: 416 DIYNPAGNRKSAGFTIEERQSFETNFLEKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG 475

Query: 208 WRLDYFLVSETIAGKVHDSYILPDVGGSDHCPIGLVLKL 247
           WRLDYFLVS+ +A KVHDSYILPDVGGSDHCPIGLVLKL
Sbjct: 476 WRLDYFLVSDRMAEKVHDSYILPDVGGSDHCPIGLVLKL 514

[Close]
BLAST of Spg032922 vs. ExPASy Swiss-Prot
Match: P45951 (DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ARP PE=1 SV=2)

HSP 1 Score: 375.9 bits (964), Expect = 3.4e-103
Identity = 166/218 (76.15%), Postives = 199/218 (91.28%), Query Frame = 0 

Query: 29  KDILQIEKSLMDGYHYTYWTCSVSKLGYSGTAIISRMQPISVRYGLGVSEHDGEGRLVMV 88
           KD+ +I+K+L+DGY +++W+CSVSKLGYSGTAIISR++P+SVRYG G+S HD EGR+V  
Sbjct: 319 KDVEEIKKTLIDGYDHSFWSCSVSKLGYSGTAIISRIKPLSVRYGTGLSGHDTEGRIVTA 378

Query: 89  EFESFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYMKELEKLKPVILTGDLNCAHEEID 148
           EF+SF+L+N YVPNSGDGLKRLSYRI +WD +LSN++KELEK KPV+LTGDLNCAHEEID
Sbjct: 379 EFDSFYLINTYVPNSGDGLKRLSYRIEEWDRTLSNHIKELEKSKPVVLTGDLNCAHEEID 438

Query: 149 IYNPAGNRKSAGFTDEERQSFETNYLERGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKGW 208
           I+NPAGN++SAGFT EERQSF  N L++GFVDTFR++HP VVGYTYWGYRHGGRKTNKGW
Sbjct: 439 IFNPAGNKRSAGFTIEERQSFGANLLDKGFVDTFRKQHPGVVGYTYWGYRHGGRKTNKGW 498

Query: 209 RLDYFLVSETIAGKVHDSYILPDVGGSDHCPIGLVLKL 247
           RLDYFLVS++IA  VHDSYILPD+ GSDHCPIGL+LKL
Sbjct: 499 RLDYFLVSQSIAANVHDSYILPDINGSDHCPIGLILKL 536

[Close]
BLAST of Spg032922 vs. ExPASy Swiss-Prot
Match: P37454 (Exodeoxyribonuclease OS=Bacillus subtilis (strain 168) OX=224308 GN=exoA PE=1 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.1e-61
Identity = 107/205 (52.20%), Postives = 154/205 (75.12%), Query Frame = 0 

Query: 43  HYTYWTCSVSKLGYSGTAIISRMQPISVRYGLGVSEHDGEGRLVMVEFESFFLLNVYVPN 102
           ++ YW  +V K GYSGTA+ S+ +P+ V YG+GV EHD EGR++ +EFE+ F++ VY PN
Sbjct: 51  YHVYWNYAVKK-GYSGTAVFSKQEPLQVIYGIGVEEHDQEGRVITLEFENVFVMTVYTPN 110

Query: 103 SGDGLKRLSYRITQWDPSLSNYMKELEKLKPVILTGDLNCAHEEIDIYNPAGNRKSAGFT 162
           S  GL+R+ YR+ QW+ +L +Y+ EL++ KPVIL GDLN AH+EID+ NP  NR +AGF+
Sbjct: 111 SRRGLERIDYRM-QWEEALLSYILELDQKKPVILCGDLNVAHQEIDLKNPKANRNNAGFS 170

Query: 163 DEERQSFETNYLERGFVDTFRQKHPDVVG-YTYWGYRHGGRKTNKGWRLDYFLVSETIAG 222
           D+ER++F T +LE GFVD+FR  +PD+ G Y++W YR G R  N GWR+DYF+VSE++  
Sbjct: 171 DQEREAF-TRFLEAGFVDSFRHVYPDLEGAYSWWSYRAGARDRNIGWRIDYFVVSESLKE 230

Query: 223 KVHDSYILPDVGGSDHCPIGLVLKL 247
           ++ D+ I  DV GSDHCP+ L++ +
Sbjct: 231 QIEDASISADVMGSDHCPVELIINI 252

[Close]
BLAST of Spg032922 vs. ExPASy Swiss-Prot
Match: A0MTA1 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Danio rerio OX=7955 GN=apex1 PE=1 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 4.5e-55
Identity = 108/220 (49.09%), Postives = 138/220 (62.73%), Query Frame = 0 

Query: 26  CPEKDILQIEKSLMDGYHYTYWTCSVSKLGYSGTAIISRMQPISVRYGLGVSEHDGEGRL 85
           C EK  L  + + M  Y + YW  S  K GYSG A++ + +P++V YG+G  EHD EGR+
Sbjct: 92  CAEK-ALPADITGMPEYPHKYWAGSEDKEGYSGVAMLCKTEPLNVTYGIGKEEHDKEGRV 151

Query: 86  VMVEFESFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYMKELEKLKPVILTGDLNCAHE 145
           +  EF  FFL+  YVPN+  GL RL YR T WD     Y+  L+  KP++L GDLN AH+
Sbjct: 152 ITAEFPDFFLVTAYVPNASRGLVRLDYRKT-WDVDFRAYLCGLDARKPLVLCGDLNVAHQ 211

Query: 146 EIDIYNPAGNRKSAGFTDEERQSFETNYLERGFVDTFRQKHPD-VVGYTYWGYRHGGRKT 205
           EID+ NP GNRK+AGFT EER+ F T  LE GF D+FR+ +PD    YT+W Y    R  
Sbjct: 212 EIDLKNPKGNRKNAGFTPEEREGF-TQLLEAGFTDSFRELYPDQAYAYTFWTYMMNARSK 271

Query: 206 NKGWRLDYFLVSETIAGKVHDSYILPDVGGSDHCPIGLVL 245
           N GWRLDYF++S  +   + DS I     GSDHCPI L L
Sbjct: 272 NVGWRLDYFVLSSALLPGLCDSKIRNTAMGSDHCPITLFL 308

[Close]
BLAST of Spg032922 vs. ExPASy Swiss-Prot
Match: P43138 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Rattus norvegicus OX=10116 GN=Apex1 PE=1 SV=2)

HSP 1 Score: 212.2 bits (539), Expect = 6.5e-54
Identity = 102/216 (47.22%), Postives = 133/216 (61.57%), Query Frame = 0 

Query: 32  LQIEKSLMDGYHYTYWTCSVSKLGYSGTAIISRMQPISVRYGLGVSEHDGEGRLVMVEFE 91
           L  E   + G  + YW+    K GYSG  ++SR  P+ V YG+G  EHD EGR+++ EFE
Sbjct: 103 LPAELQELPGLTHQYWSAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEFE 162

Query: 92  SFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYMKELEKLKPVILTGDLNCAHEEIDIYN 151
           SF L+  YVPN+G GL RL YR  +WD +   ++K+L   KP++L GDLN AHEEID+ N
Sbjct: 163 SFILVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLKDLASRKPLVLCGDLNVAHEEIDLRN 222

Query: 152 PAGNRKSAGFTDEERQSFETNYLERGFVDTFRQKHPDVV-GYTYWGYRHGGRKTNKGWRL 211
           P GN+K+AGFT +ERQ F          D+FR  +P+    YT+W Y    R  N GWRL
Sbjct: 223 PKGNKKNAGFTPQERQGFGEMLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRL 282

Query: 212 DYFLVSETIAGKVHDSYILPDVGGSDHCPIGLVLKL 247
           DYFL+S ++   + DS I     GSDHCPI L L L
Sbjct: 283 DYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL 317

[Close]
BLAST of Spg032922 vs. ExPASy Swiss-Prot
Match: P28352 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Mus musculus OX=10090 GN=Apex1 PE=1 SV=2)

HSP 1 Score: 211.5 bits (537), Expect = 1.1e-53
Identity = 102/216 (47.22%), Postives = 133/216 (61.57%), Query Frame = 0 

Query: 32  LQIEKSLMDGYHYTYWTCSVSKLGYSGTAIISRMQPISVRYGLGVSEHDGEGRLVMVEFE 91
           L  E   + G  + YW+    K GYSG  ++SR  P+ V YG+G  EHD EGR+++ EFE
Sbjct: 103 LPAELQELPGLTHQYWSAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEFE 162

Query: 92  SFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYMKELEKLKPVILTGDLNCAHEEIDIYN 151
           SF L+  YVPN+G GL RL YR  +WD +   ++K+L   KP++L GDLN AHEEID+ N
Sbjct: 163 SFVLVTAYVPNAGRGLVRLEYR-QRWDEAFRKFLKDLASRKPLVLCGDLNVAHEEIDLRN 222

Query: 152 PAGNRKSAGFTDEERQSFETNYLERGFVDTFRQKHPDVV-GYTYWGYRHGGRKTNKGWRL 211
           P GN+K+AGFT +ERQ F          D+FR  +P+    YT+W Y    R  N GWRL
Sbjct: 223 PKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRL 282

Query: 212 DYFLVSETIAGKVHDSYILPDVGGSDHCPIGLVLKL 247
           DYFL+S ++   + DS I     GSDHCPI L L L
Sbjct: 283 DYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL 317

[Close]
BLAST of Spg032922 vs. ExPASy TrEMBL
Match: A0A6J1GE86 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucurbita moschata OX=3662 GN=LOC111453177 PE=3 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 4.1e-120
Identity = 202/219 (92.24%), Postives = 215/219 (98.17%), Query Frame = 0 

Query: 28  EKDILQIEKSLMDGYHYTYWTCSVSKLGYSGTAIISRMQPISVRYGLGVSEHDGEGRLVM 87
           EKD+L+I+ SLMDGYHYTYWTCSVSKLGYSGTAIISR++PISVRYG+G+SEHD EGRLVM
Sbjct: 245 EKDVLEIKNSLMDGYHYTYWTCSVSKLGYSGTAIISRIEPISVRYGVGISEHDSEGRLVM 304

Query: 88  VEFESFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYMKELEKLKPVILTGDLNCAHEEI 147
           VEFESF+LLNVYVPNSGDGLKRLSYRITQWDPSLSNYMKELEKLKPVILTGDLNCAH+EI
Sbjct: 305 VEFESFYLLNVYVPNSGDGLKRLSYRITQWDPSLSNYMKELEKLKPVILTGDLNCAHQEI 364

Query: 148 DIYNPAGNRKSAGFTDEERQSFETNYLERGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG 207
           DIYNPAGNRKSAGFTDEERQSFET+YLE+GFVDTFRQKHPDVVGYTYWGYRHGGRKTN+G
Sbjct: 365 DIYNPAGNRKSAGFTDEERQSFETSYLEKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNRG 424

Query: 208 WRLDYFLVSETIAGKVHDSYILPDVGGSDHCPIGLVLKL 247
           WRLDYFLVS TIA KVH+SYILPDVGGSDHCPIGLVLKL
Sbjct: 425 WRLDYFLVSGTIAEKVHESYILPDVGGSDHCPIGLVLKL 463

[Close]
BLAST of Spg032922 vs. ExPASy TrEMBL
Match: A0A6J1GE66 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucurbita moschata OX=3662 GN=LOC111453177 PE=3 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 4.1e-120
Identity = 202/219 (92.24%), Postives = 215/219 (98.17%), Query Frame = 0 

Query: 28  EKDILQIEKSLMDGYHYTYWTCSVSKLGYSGTAIISRMQPISVRYGLGVSEHDGEGRLVM 87
           EKD+L+I+ SLMDGYHYTYWTCSVSKLGYSGTAIISR++PISVRYG+G+SEHD EGRLVM
Sbjct: 282 EKDVLEIKNSLMDGYHYTYWTCSVSKLGYSGTAIISRIEPISVRYGVGISEHDSEGRLVM 341

Query: 88  VEFESFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYMKELEKLKPVILTGDLNCAHEEI 147
           VEFESF+LLNVYVPNSGDGLKRLSYRITQWDPSLSNYMKELEKLKPVILTGDLNCAH+EI
Sbjct: 342 VEFESFYLLNVYVPNSGDGLKRLSYRITQWDPSLSNYMKELEKLKPVILTGDLNCAHQEI 401

Query: 148 DIYNPAGNRKSAGFTDEERQSFETNYLERGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG 207
           DIYNPAGNRKSAGFTDEERQSFET+YLE+GFVDTFRQKHPDVVGYTYWGYRHGGRKTN+G
Sbjct: 402 DIYNPAGNRKSAGFTDEERQSFETSYLEKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNRG 461

Query: 208 WRLDYFLVSETIAGKVHDSYILPDVGGSDHCPIGLVLKL 247
           WRLDYFLVS TIA KVH+SYILPDVGGSDHCPIGLVLKL
Sbjct: 462 WRLDYFLVSGTIAEKVHESYILPDVGGSDHCPIGLVLKL 500

[Close]
BLAST of Spg032922 vs. ExPASy TrEMBL
Match: A0A1S3B7C7 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucumis melo OX=3656 GN=LOC103486961 PE=3 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 9.2e-120
Identity = 203/219 (92.69%), Postives = 214/219 (97.72%), Query Frame = 0 

Query: 28  EKDILQIEKSLMDGYHYTYWTCSVSKLGYSGTAIISRMQPISVRYGLGVSEHDGEGRLVM 87
           EKDIL I KSLMDGYHYTYWTCSVSKLGYSGTAIISR++PISVRYGLG+SEHDGEGR+VM
Sbjct: 296 EKDILTITKSLMDGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM 355

Query: 88  VEFESFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYMKELEKLKPVILTGDLNCAHEEI 147
           VEF+SFFLLNVYVPNSGDGLKRLSYRIT+WDPSLSNYMKELEKLKPVILTGDLNCAH+EI
Sbjct: 356 VEFDSFFLLNVYVPNSGDGLKRLSYRITEWDPSLSNYMKELEKLKPVILTGDLNCAHQEI 415

Query: 148 DIYNPAGNRKSAGFTDEERQSFETNYLERGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG 207
           DIYNPAGNRKSAGFT EERQSFETN+LE+GFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG
Sbjct: 416 DIYNPAGNRKSAGFTIEERQSFETNFLEKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG 475

Query: 208 WRLDYFLVSETIAGKVHDSYILPDVGGSDHCPIGLVLKL 247
           WRLDYFLVS+ +A KVHDSYILPDVGGSDHCPIGLVLKL
Sbjct: 476 WRLDYFLVSDRMAEKVHDSYILPDVGGSDHCPIGLVLKL 514

[Close]
BLAST of Spg032922 vs. ExPASy TrEMBL
Match: A0A1S4DUI2 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucumis melo OX=3656 GN=LOC103486961 PE=3 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 9.2e-120
Identity = 203/219 (92.69%), Postives = 214/219 (97.72%), Query Frame = 0 

Query: 28  EKDILQIEKSLMDGYHYTYWTCSVSKLGYSGTAIISRMQPISVRYGLGVSEHDGEGRLVM 87
           EKDIL I KSLMDGYHYTYWTCSVSKLGYSGTAIISR++PISVRYGLG+SEHDGEGR+VM
Sbjct: 249 EKDILTITKSLMDGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM 308

Query: 88  VEFESFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYMKELEKLKPVILTGDLNCAHEEI 147
           VEF+SFFLLNVYVPNSGDGLKRLSYRIT+WDPSLSNYMKELEKLKPVILTGDLNCAH+EI
Sbjct: 309 VEFDSFFLLNVYVPNSGDGLKRLSYRITEWDPSLSNYMKELEKLKPVILTGDLNCAHQEI 368

Query: 148 DIYNPAGNRKSAGFTDEERQSFETNYLERGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG 207
           DIYNPAGNRKSAGFT EERQSFETN+LE+GFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG
Sbjct: 369 DIYNPAGNRKSAGFTIEERQSFETNFLEKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG 428

Query: 208 WRLDYFLVSETIAGKVHDSYILPDVGGSDHCPIGLVLKL 247
           WRLDYFLVS+ +A KVHDSYILPDVGGSDHCPIGLVLKL
Sbjct: 429 WRLDYFLVSDRMAEKVHDSYILPDVGGSDHCPIGLVLKL 467

[Close]
BLAST of Spg032922 vs. ExPASy TrEMBL
Match: A0A1S3B8L3 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucumis melo OX=3656 GN=LOC103486961 PE=3 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 9.2e-120
Identity = 203/219 (92.69%), Postives = 214/219 (97.72%), Query Frame = 0 

Query: 28  EKDILQIEKSLMDGYHYTYWTCSVSKLGYSGTAIISRMQPISVRYGLGVSEHDGEGRLVM 87
           EKDIL I KSLMDGYHYTYWTCSVSKLGYSGTAIISR++PISVRYGLG+SEHDGEGR+VM
Sbjct: 297 EKDILTITKSLMDGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVM 356

Query: 88  VEFESFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYMKELEKLKPVILTGDLNCAHEEI 147
           VEF+SFFLLNVYVPNSGDGLKRLSYRIT+WDPSLSNYMKELEKLKPVILTGDLNCAH+EI
Sbjct: 357 VEFDSFFLLNVYVPNSGDGLKRLSYRITEWDPSLSNYMKELEKLKPVILTGDLNCAHQEI 416

Query: 148 DIYNPAGNRKSAGFTDEERQSFETNYLERGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG 207
           DIYNPAGNRKSAGFT EERQSFETN+LE+GFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG
Sbjct: 417 DIYNPAGNRKSAGFTIEERQSFETNFLEKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKG 476

Query: 208 WRLDYFLVSETIAGKVHDSYILPDVGGSDHCPIGLVLKL 247
           WRLDYFLVS+ +A KVHDSYILPDVGGSDHCPIGLVLKL
Sbjct: 477 WRLDYFLVSDRMAEKVHDSYILPDVGGSDHCPIGLVLKL 515

[Close]
BLAST of Spg032922 vs. TAIR 10
Match: AT2G41460.1 (apurinic endonuclease-redox protein )

HSP 1 Score: 375.9 bits (964), Expect = 2.4e-104
Identity = 166/218 (76.15%), Postives = 199/218 (91.28%), Query Frame = 0 

Query: 29  KDILQIEKSLMDGYHYTYWTCSVSKLGYSGTAIISRMQPISVRYGLGVSEHDGEGRLVMV 88
           KD+ +I+K+L+DGY +++W+CSVSKLGYSGTAIISR++P+SVRYG G+S HD EGR+V  
Sbjct: 319 KDVEEIKKTLIDGYDHSFWSCSVSKLGYSGTAIISRIKPLSVRYGTGLSGHDTEGRIVTA 378

Query: 89  EFESFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYMKELEKLKPVILTGDLNCAHEEID 148
           EF+SF+L+N YVPNSGDGLKRLSYRI +WD +LSN++KELEK KPV+LTGDLNCAHEEID
Sbjct: 379 EFDSFYLINTYVPNSGDGLKRLSYRIEEWDRTLSNHIKELEKSKPVVLTGDLNCAHEEID 438

Query: 149 IYNPAGNRKSAGFTDEERQSFETNYLERGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKGW 208
           I+NPAGN++SAGFT EERQSF  N L++GFVDTFR++HP VVGYTYWGYRHGGRKTNKGW
Sbjct: 439 IFNPAGNKRSAGFTIEERQSFGANLLDKGFVDTFRKQHPGVVGYTYWGYRHGGRKTNKGW 498

Query: 209 RLDYFLVSETIAGKVHDSYILPDVGGSDHCPIGLVLKL 247
           RLDYFLVS++IA  VHDSYILPD+ GSDHCPIGL+LKL
Sbjct: 499 RLDYFLVSQSIAANVHDSYILPDINGSDHCPIGLILKL 536

[Close]
BLAST of Spg032922 vs. TAIR 10
Match: AT2G41460.2 (apurinic endonuclease-redox protein )

HSP 1 Score: 133.3 bits (334), Expect = 2.7e-31
Identity = 57/82 (69.51%), Postives = 74/82 (90.24%), Query Frame = 0 

Query: 29  KDILQIEKSLMDGYHYTYWTCSVSKLGYSGTAIISRMQPISVRYGLGVSEHDGEGRLVMV 88
           KD+ +I+K+L+DGY +++W+CSVSKLGYSGTAIISR++P+SVRYG G+S HD EGR+V  
Sbjct: 319 KDVEEIKKTLIDGYDHSFWSCSVSKLGYSGTAIISRIKPLSVRYGTGLSGHDTEGRIVTA 378

Query: 89  EFESFFLLNVYVPNSGDGLKRL 111
           EF+SF+L+N YVPNSGDGLKRL
Sbjct: 379 EFDSFYLINTYVPNSGDGLKRL 400

[Close]
BLAST of Spg032922 vs. TAIR 10
Match: AT3G60950.1 (C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase )

HSP 1 Score: 122.5 bits (306), Expect = 4.8e-28
Identity = 58/95 (61.05%), Postives = 74/95 (77.89%), Query Frame = 0 

Query: 65  MQPISVRYGLGV--SEHDGEGRLVMVEFESFFLLNVYVPNSGDGLKRLSY----RITQWD 124
           ++P+ VRYG G+  S+HD EGR+V  EF+SF+L++ YVPNS DGLK L       I  WD
Sbjct: 502 IKPLRVRYGTGLSGSDHDMEGRMVTAEFDSFYLISTYVPNSVDGLKGLVLLKLNAIEDWD 561

Query: 125 PSLSNYMKELEKLKPVILTGDLNCAHEEIDIYNPA 154
            +LSN++K+LEK KPV+LTGDLNCAHEEIDI+NPA
Sbjct: 562 RTLSNHIKDLEKSKPVVLTGDLNCAHEEIDIFNPA 596

[Close]
BLAST of Spg032922 vs. TAIR 10
Match: AT3G48425.1 (DNAse I-like superfamily protein )

HSP 1 Score: 109.0 bits (271), Expect = 5.5e-24
Identity = 78/233 (33.48%), Postives = 118/233 (50.64%), Query Frame = 0 

Query: 41  GYHYTYWTCSVSKLGYSGTAIISR--MQPISVRYGLG--VSEHDGEGRLVMVEFESFFLL 100
           G +  +W+ + SK  Y+GTA++ +   +P  V + L    S+H+ +GR+++ EFE+F LL
Sbjct: 122 GNYGVWWSLADSK--YAGTALLVKKCFKPRKVYFNLDKLASKHEPDGRVILAEFETFRLL 181

Query: 101 NVYVPNSG-DGLKRLSYRITQWDPSLSNYMKELEKLKPVILTGDLNCAHEEIDIYNP--- 160
           N Y PN+G    +    R  +WD  +  ++ +    KP+I  GDLN +HEEID+ +P   
Sbjct: 182 NTYSPNNGWKDEENAFQRRRKWDKRIVEFLNKTSD-KPLIWCGDLNVSHEEIDVSHPEFF 241

Query: 161 ---------AGNRKSA---GFTDEERQSFETNYLERGFVDTFRQKHPD---VVGYTYWGY 220
                      N++     GFT  ER  F     E   VD +R  H +     G++ W  
Sbjct: 242 ATAKLNGYVPPNKEDCGQPGFTPSERGRFGATIKEGRLVDAYRYLHKEQEMESGFS-WSG 301

Query: 221 RHGGRKTNKGWRLDYFLVSE-----TIAGKVHDSYI-LPDVGGSDHCPIGLVL 245
              G+   K  R+DYFLVSE      ++ K+H   I L    GSDHCP+ L L
Sbjct: 302 NPIGKYRGKRMRIDYFLVSEQLKDRIVSCKMHGRGIELEGFHGSDHCPVTLEL 350

[Close]
BLAST of Spg032922 vs. TAIR 10
Match: AT3G61030.1 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 71.6 bits (174), Expect = 9.7e-13
Identity = 35/68 (51.47%), Postives = 48/68 (70.59%), Query Frame = 0 

Query: 65  MQPISVRYGLGV--SEHDGEGRLVMVEFESFFLLNVYVPNSGDGLKRLSY----RITQWD 124
           ++P+ VRYG G+  S+HD EGR+V  EF+SF+L++ YVPNS DGLK L       I  WD
Sbjct: 441 IKPLRVRYGTGLSGSDHDMEGRMVTAEFDSFYLISTYVPNSVDGLKGLVLLKLNAIEDWD 500

Query: 125 PSLSNYMK 127
            +LSN++K
Sbjct: 501 RTLSNHIK 508

The following BLAST results are available for this feature:
BLAST of Spg032922 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022949944.18.6e-12092.24DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X2 [Cucurbita m... [more]
XP_022949935.18.6e-12092.24DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X1 [Cucurbita m... [more]
XP_016899623.11.9e-11992.69PREDICTED: DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X3 [... [more]
XP_008443352.11.9e-11992.69PREDICTED: DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X1 [... [more]
XP_008443353.11.9e-11992.69PREDICTED: DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X2 [... [more]
BLAST of Spg032922 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P459513.4e-10376.15DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic OS=Arabidopsis t... [more]
P374541.1e-6152.20Exodeoxyribonuclease OS=Bacillus subtilis (strain 168) OX=224308 GN=exoA PE=1 SV... [more]
A0MTA14.5e-5549.09DNA-(apurinic or apyrimidinic site) endonuclease OS=Danio rerio OX=7955 GN=apex1... [more]
P431386.5e-5447.22DNA-(apurinic or apyrimidinic site) endonuclease OS=Rattus norvegicus OX=10116 G... [more]
P283521.1e-5347.22DNA-(apurinic or apyrimidinic site) endonuclease OS=Mus musculus OX=10090 GN=Ape... [more]
BLAST of Spg032922 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GE864.1e-12092.24DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucurbita moschata OX=3662 G... [more]
A0A6J1GE664.1e-12092.24DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucurbita moschata OX=3662 G... [more]
A0A1S3B7C79.2e-12092.69DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A1S4DUI29.2e-12092.69DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A1S3B8L39.2e-12092.69DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucumis melo OX=3656 GN=LOC1... [more]
BLAST of Spg032922 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G41460.12.4e-10476.15apurinic endonuclease-redox protein [more]
AT2G41460.22.7e-3169.51apurinic endonuclease-redox protein [more]
AT3G60950.14.8e-2861.05C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase [more]
AT3G48425.15.5e-2433.48DNAse I-like superfamily protein [more]
AT3G61030.19.7e-1351.47Calcium-dependent lipid-binding (CaLB domain) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 25..245
e-value: 1.8E-78
score: 266.0
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 36..246
NoneNo IPR availableTIGRFAMTIGR00195TIGR00195coord: 35..243
e-value: 5.1E-63
score: 211.0
NoneNo IPR availablePANTHERPTHR22748:SF12DNA-(APURINIC OR APYRIMIDINIC SITE) LYASEcoord: 29..232
NoneNo IPR availableCDDcd09087Ape1-like_AP-endocoord: 26..244
e-value: 3.05476E-123
score: 348.773
IPR004808AP endonuclease 1TIGRFAMTIGR00633TIGR00633coord: 33..245
e-value: 5.1E-76
score: 253.5
IPR004808AP endonuclease 1PANTHERPTHR22748AP ENDONUCLEASEcoord: 29..232
IPR004808AP endonuclease 1PROSITEPS51435AP_NUCLEASE_F1_4coord: 1..246
score: 43.477512
IPR005135Endonuclease/exonuclease/phosphatasePFAMPF03372Exo_endo_phoscoord: 47..237
e-value: 6.4E-10
score: 39.0
IPR020848AP endonuclease 1, conserved sitePROSITEPS00728AP_NUCLEASE_F1_3coord: 205..216
IPR020848AP endonuclease 1, conserved sitePROSITEPS00727AP_NUCLEASE_F1_2coord: 180..195

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg032922.1Spg032922.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016311 dephosphorylation
biological_process GO:0033683 nucleotide-excision repair, DNA incision
biological_process GO:0006281 DNA repair
cellular_component GO:0042644 chloroplast nucleoid
molecular_function GO:0008408 3'-5' exonuclease activity
molecular_function GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0016829 lyase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016791 phosphatase activity
molecular_function GO:0004528 phosphodiesterase I activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0004518 nuclease activity