Spg032786 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg032786
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Locationscaffold11: 9391576 .. 9397504 (+)
RNA-Seq ExpressionSpg032786
SyntenySpg032786
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTCAATCCCAAGGTGAATGGAGAAATTGTTCATAGTAAGTGGGAGAAGGACGCATGTCATTGTATCCTACTATCTCCACCCCTAGGTTGCACCATGAGATTCTTATGATCCGTCTGCATGTCGCCCTGGGAGAGACCATCCCTTCGTAGGGCCTGATCATAAGTTTCAGAACACCGCGAACTGTAGAACGAGATAGGGTCACTTAGGTTAATCACCATCAGTTGTCTTTCTTAACGATATCCTGTTGGTGCGTACCTCTGGGATATGAAAGTGGGAGGGTCACACTTACGAGAACGAGTTAAAAGTTAATGACTTCTTGACCGAACAAACGGTAGCTAATAGCTATAGGAATATGAGATGTTCTGGTATTAGAAACTGGCTGAGATAAGTCTCAAATCAGTGGAGGAGTAGCTGATCACCCTTCGGTGGTTGTTGCTCTAAACCTCTGAAGTATCACTGCAAAACTATATTGATAGTTTATTAGGGTTACTTTGATTAATAGTTTTGCTAAACTTCATTGTATTATTTAAAATGGTTAGGGCAAAATAAACTAATATAGTCAAATGTTTATTTTTCAGCATGTCTTCTTCTATATTACAACTGCGTAAAAACGATAAGTTAACCGACGAAAACTACGTGACATGGAAATCTAACCTGAACATGGTTCTGGTTATTGATGATATGCAGTTTGTCTTGACGGACGAATGTCCTCCAGTCCCTGTTCGTACTGCATCTCAGTCTGCTAAAAATGCACATGATCGTTGGACAAAGGCTAATGAGAAGGCCTGAGTCTATATTCTGGCTAACATATCTGAAGTATTTTCCAAGAAGCATGAGGGAATGGTCTTGGCTAGAGAGATCATGAGTTTACTTTAGGAAATGTTCGGACAACTGTCCTTTCAACTCCATCATGAACCCCTCACATACATTTACAATTGTCGCATGAAAGAAGGCCAACCTGTTCGAGAACATGTTCTTGATATGATGGTCCATTTCAATGTTGCAGAAGTAAATGGGGTAGTCATCGACGAACGTAGTCAAGTAGCATTTATAATGGAGTCACTTTGATTGCGACTAATTCGTGCTATCTTATTATCACTAATATAAGCTTGTTAGAAGAATTTTATGCCTTAATTGTAAACCCGAGACTTTCCTTGGATCATTTCCTCTTGTCATCTATTGTGGAAGTTGAATTAAAAGTTGTTGTTGTTCATTGTTGAGGAAAAATAGCAAAGTTTTGTGGTTCTTTGTGGTTTCATTGTTGGTTGAAGTTGTTGGAACTTACTAACTTAAAAGAAGAAATGGAATAAAGAAGAAAAAGAAAAGAAAAGAAAAGGAAAAAAGAAAATGAAATAGGAAAATGAAAAAAATAAGAAAAGAAAGAAAATGGGAAAGGACAGCAAGAAACCCACCACCGACAAGCTTACCTTCAGCCCATTTTCAGTCATTTCCAGCCACATTTCTCCATCTTTGCCATCCAAACTTCAGAGAATTCGAGGGAGAGAGTGAAGGAAGGAGAAGAAGAATGTTTCTACGGTTTTGAGGTTGGAGAAGATAGGAAAAAGCTCAAGCAAAGGCAGCCATGGCAGAAATCTGAGTTCAACCTGCCAACCTCTGGTTTTTTATTCGGTTTGAGCTACACAGAAGGAAATAAGAGGTGAGGTTTGATTTTCTTGAAATTTAGTCCATTGTATAACAAATTTCATGAAGGAAGATTGAGCTAAATCTGATGAGAAGTTAATGGTTTTTGAAATGGAAAACAGAGCACAGGATTTTCGAGCAAACCAGGAAGATCTCTGGTTTTCTCTGGTGTTTCGTTCATTCTGGGGTGTACGAGTTGAATCAGAAGCTCTATTTTGTATGGTTGGAAAGCTTATTCAATTTCCTAAAACTTTCATGAAGAATTTGTGAGCCCAAAATGACTTGAAGCAAGTTTAATTTCAGGAGGTATATAAAGGGTAGCAGAGAACCTTGAATCTGTGTTGTCTGTGTTCGGGGCATTTCTGGACACATTGGTTGGGAATCTCGTTTTCATTTCTTCAAGTTAGTTGTAGAGTGTTCAAAATTGAAGAGTTTGATGTATAGCACAATAATTTTGGTTAAGTATTGAGGAAGTTATGGGTGTTGGAAGTTAGGGTATAGAATTTGGAAAATCTGGAAAAGTAGAATGTGAAGTGTGATTTTTAATTCAAGTGTTTAGAATTCATGAGCATGGAAGAATAAGACTACTTATGGTTCTAATGCTCGATTTTGGTTGTTTGACAGGCCAAGAGGAAATAGGTCGAGTCTACAGACCAGGAAACTAGCTAAGATCGTGAGTGACAAAACAAATTTCGAAAATTGTTTCTAAACGGTTGTTCATGATTAGATGTTTTATATATTTTTCTATGAATGATATATGATTTCTATGAATGGTTTCAAGCATAAGTTTTGAGCTTAGATTTTCTAATGAGGTTTATATACGAGCACGTGGTTAATGACTTAATGAAAAGTAGTTGAAACGATATCATTTAAAGTAAAGTATGTATTAGCAAGTACTGTTTAAAGATTTTCAATTTTTCACGAGCAAGCTAAGTAAGCTTAAGTTTTATGAAAGGTAACGATAAGCAGGCATGTTCTAATGTTTTCATGTGATTTTTCTAAGATTTCTATTGACTACATGACTGAGATATTGAGCCCGATGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCACTACATCGTAGAGCTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTTGATTTGTCATGTTAGTTGAGATGTTTTATATAATTGATATGCCTTGCTGAATTTTAATAATGTACTTGCGAGTTATTTGAGAAAGCTTTTATCGTTACACGCTTATGTTAAACGCTTGATTGAGTAGATTTATACGTCTAAAGGTTTATCATGTGTTCCAATTTGCAAATCTACAGTTTTTAAAGTTAGTCACTCACTGGGCTTCGTAGCTCACTCTTTCAAAATATTTTCCCACTTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTACCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGTATATGGAGTCTGTCTATATTGTAAATGTTTTGTACGGATTGGATAATTCACGGTTTGTGTAAGTTCTAGAGGTCGTGGTTGTATAAACCCTAGTTGAATATGGTTTGGTTGTGATATCTATATCAGGTTATTTTCCAAACCGAGTTATGTCAGGGCTGCACCTCGTGTATGTTAAAAGGTTTTCAGGGATTCCGCTGTGTTGTGTTCCACGTAGAATATTTTATATCTAAGATTAGTATGTTTATCAGGTTCAACATTTCAGGAGGGTCAACGGGTATTGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTCCGGACTAAGCTAGCAGGTGGACCGGGAGAGGGTGTGACATTAATTGTCTTATTTTCAGGTAATTCGAGCATAGGTAGCATTGGGAGCCAACCACGTGAATTGGTGCTAATTTGGGCAAGTTAGAGTGTTTTTGAGCCATCTCAAAGTTCTTGGACGACGAGGAGGTGAAGAGACTCAAGCGGATCGAAGCGAGCCTGAATAATAGTGCCAAGGAGTCAAAGGTTCAAGCTCCAAGCCGAGAAAGACCGATATAAAATCTAGAAAAAAGGCAGCAAGCTGGAAAAGAAGTTAAGGTCGAGACGCTGACCCTAGCGTCTCAACGCTAACGCGATTTTGCACGGAAGACAGATCCGTAGCATTGAGTCGTTGTTTTCCTAGCGTCTCGACGCTACGACGATTAGTATAAATAATAGAGTTTGGTTTAGTCCGTCGTTAGGTCAGATTTTATGATTTCTTTCGTTCTTAGCTCATTTTCCCTCTATTTTCTTCTATTTTTCTAATCGCTAGTTGCTTTAGGATGAATTTCTTTGTGGAAATTGTTGTATTTCCTTCAAGTATGTTAGCTTAATCTCTTTATTCGTCGGATTATTGGATGTAGTTGCAATAGTTTGTCTTACTTGATGGCGTTTGCTGGTTTATAATGGATTCTTCTGGATTTTTATGTTCATCTATCTTATCTTGTTTAAACCATTGTCTTTGAATGCTTTCTTAGGCAATCTATTAGTTATTTGAGATAGCCACTAGGTTTGAATCATGTTCTTTGCATCTTTCTATATGAATTTGCATAGCTTGCTTGATAGGGCCTAAGAAACATAGAGAAGTTAGTCAATTTAATTAGGAAGTTAATTATGTTGGGTTTTATGTCCTAAAACTCGTGGATAGTAAATGTAACAAAGTTAATTATAATCAATAAGCGTTATTGAGGTTATTCAATAAGTTGTTATTGAATGGTTGTTTATATTATGCAATAATTAACCCAAATCCAATAAAATAGAACCCATGGTTGTATATAATGAACACTTGAACTTTATGTGTAGACATAAAAACAGATCAAGTTCAAGTAATAGCCAAAACGGTCTATAGTATAGGGATAAGGTTGGGTGCCTTATCCTGGGAACACTATGAGACGCAACCCTCTTTGTATATAATACAAACGATGTGATCCTGAATCGTTCATGTAAAGATATGCGAGTGGGGGCGTCCTATGCGATGAGTTTGCATAAGACCAGGACCGAGAAATAAGTCACTTTCCTTTATAACGCCGTTTACTGTGAAACTGACTATTTCATGCGATGACCTAGGTAACTCGATCTTAATCCTGAGCTAACTATGAACTCCAATTTATTAGGGATTATCCTTTGATTTGAATGGATGAGAGTGGCTCAACATCACCGACTCAATAAGCCTACCATTTTGGGGATAAAACCGAGTAGATAGCTGGAGACATAGTAATGCAAGATGAAATTCACTCCTACCCGCCTGTAGGATAGTATAGGTTGTTCCTTTAAGTGTTGACTTCGGGTCTTGAACAAAAGCGCGTCATCCTCTCCTGGCTCGAGAGGAATTTTTGTTTAATGGTTGGACCATAAACAAATTGTTCATTATAGTATCAGTGGAACATAAGGAACAAGATGTAACTTAAGGGGTAAATGGACTTTTGACCCGCTGCAGTTACAAACAACCTGTGAAGGGTCGACTTACTAATTATGGTTATATCGGGTGGACAGAAATATATCTACAGTGAGGGAGTGCAACTATGGGCTATAATGGAATGTCTCGTTAGTTAACGAATGTTGGTTAAACTAGGTTAATGAGTTTAACCGGTTAATCTCGAATCGTTGGAGCCTATGATGTGTAGGTCCATTAGGTCCCCCTACTAGCTCATACTGAATCAACCTTAGAACAAAGTGATGAAAGAGTTTGAATCGTTCAAATTTGATCTTGGGAGTTATCGTTAATTATATATGATATACTTAATGTGTTATGATAGCACCTAATTCGTGCTATTTTATTACCTCTAATATAAGCTTGTTAGAGGAATTTTATGCTTTAATTGTCTTTATTGCAGGTACTTTGAGCTTAGGTGACATTGGGAGCCAACCACACAATTTGGTGTTAATTCAGGCCAATTAAGGAGTTTTTGAGCCATTTTGATGTTCTTGGACGACGAGGAGGTGGAAGACCCAAGTGGATTGAAGCAGGTCTGAAGAACTACACCAAAAATCAAAGGTTGAAGCCCCATAATGAGAAAGAACGAGACAAGACCGAGAAAAAAGACAGCAAGGCTGGAAGAGGGGTCGGCGTTGAGATGAGGACCCTAGCGTCTCGACGCCGACGCGATTCCGAAGCAGATTGTAAAGTTCGTGGCGTCTCGACACTGTTCCTAACGTCTCGACGCTGCGACGTTTAG

mRNA sequence

ATGTGTCAATCCCAAGAGAATTCGAGGGAGAGAGTGAAGGAAGGAGAAGAAGAATGTTTCTACGGTTTTGAGGTTGGAGAAGATAGGAAAAAGCTCAAGCAAAGGCAGCCATGGCAGAAATCTGAGTTCAACCTGCCAACCTCTGGTTTTTTATTCGGTTTGAGCTACACAGAAGGAAATAAGAGGCCAAGAGGAAATAGGTCGAGTCTACAGACCAGGAAACTAGCTAAGATCATTTCTATTGACTACATGACTGAGATATTGAGCCCGATGCTATATGGTACCGTGTGCACACAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTACCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTTCAACATTTCAGGAGGGTCAACGGGTATTGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTCCGGACTAAGCTAGCAGGTGGACCGGGAGAGGGTGTGACATTAATTGTCTTATTTTCAGGTACTTTGAGCTTAGGAGGTGGAAGACCCAAGTGGATTGAAGCAGGTCTGAAGAACTACACCAAAAATCAAAGGTTGAAGCCCCATAATGAGAAAGAACGAGACAAGACCGAGAAAAAAGACAGCAAGGCTGGAAGAGGGGTCGGCGTTGAGATGAGGACCCTAGCGTCTCGACGCCGACGCGATTCCGAAGCAGATTGTAAAGTTCGTGGCGTCTCGACACTGTTCCTAACGTCTCGACGCTGCGACGTTTAG

Coding sequence (CDS)

ATGTGTCAATCCCAAGAGAATTCGAGGGAGAGAGTGAAGGAAGGAGAAGAAGAATGTTTCTACGGTTTTGAGGTTGGAGAAGATAGGAAAAAGCTCAAGCAAAGGCAGCCATGGCAGAAATCTGAGTTCAACCTGCCAACCTCTGGTTTTTTATTCGGTTTGAGCTACACAGAAGGAAATAAGAGGCCAAGAGGAAATAGGTCGAGTCTACAGACCAGGAAACTAGCTAAGATCATTTCTATTGACTACATGACTGAGATATTGAGCCCGATGCTATATGGTACCGTGTGCACACAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTACCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTTCAACATTTCAGGAGGGTCAACGGGTATTGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTCCGGACTAAGCTAGCAGGTGGACCGGGAGAGGGTGTGACATTAATTGTCTTATTTTCAGGTACTTTGAGCTTAGGAGGTGGAAGACCCAAGTGGATTGAAGCAGGTCTGAAGAACTACACCAAAAATCAAAGGTTGAAGCCCCATAATGAGAAAGAACGAGACAAGACCGAGAAAAAAGACAGCAAGGCTGGAAGAGGGGTCGGCGTTGAGATGAGGACCCTAGCGTCTCGACGCCGACGCGATTCCGAAGCAGATTGTAAAGTTCGTGGCGTCTCGACACTGTTCCTAACGTCTCGACGCTGCGACGTTTAG

Protein sequence

MCQSQENSRERVKEGEEECFYGFEVGEDRKKLKQRQPWQKSEFNLPTSGFLFGLSYTEGNKRPRGNRSSLQTRKLAKIISIDYMTEILSPMLYGTVCTQVEIELPVPDTLPTSAESSRSSSSSTFQEGQRVLLEEDDVRWLHAIFRTKLAGGPGEGVTLIVLFSGTLSLGGGRPKWIEAGLKNYTKNQRLKPHNEKERDKTEKKDSKAGRGVGVEMRTLASRRRRDSEADCKVRGVSTLFLTSRRCDV
Homology
[Close]
BLAST of Spg032786 vs. NCBI nr
Match: TYK01784.1 (hypothetical protein E5676_scaffold113G00120 [Cucumis melo var. makuwa])

HSP 1 Score: 109.4 bits (272), Expect = 4.6e-20
Identity = 74/154 (48.05%), Postives = 89/154 (57.79%), Query Frame = 0 

Query: 24  EVGEDRKKLKQRQPWQKSEFNLPTSGFLFGLSYTEG-NKRPRGNRSSLQTRKLAKIISID 83
           EVGE     K   P   +EF+  + GFL    +++  +  PRGNR +LQT +L K +SID
Sbjct: 606 EVGEQ----KLVGPDLSTEFSSKSEGFLV---FSDALSILPRGNRPNLQTGELDKTLSID 665

Query: 84  YMTEILSPMLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRSSSSSTF 143
           Y+TEILS  LYGTVCTQ                 VEIEL VPDTLPTSAESS S S S  
Sbjct: 666 YVTEILSLRLYGTVCTQVIFSLSTLSVLRDNDVVVEIELLVPDTLPTSAESSESKSRSV- 725

Query: 144 QEGQRVLLEEDDVRWLHAIFRTKLAGGPGEGVTL 160
                 ++  DDV WLH +FR K  GGPG GVT+
Sbjct: 726 -----GIVRGDDVCWLHVVFRAKTVGGPGVGVTI 746

[Close]
BLAST of Spg032786 vs. NCBI nr
Match: KAA0052217.1 (hypothetical protein E6C27_scaffold207G00280 [Cucumis melo var. makuwa])

HSP 1 Score: 109.4 bits (272), Expect = 4.6e-20
Identity = 74/154 (48.05%), Postives = 89/154 (57.79%), Query Frame = 0 

Query: 24  EVGEDRKKLKQRQPWQKSEFNLPTSGFLFGLSYTEG-NKRPRGNRSSLQTRKLAKIISID 83
           EVGE     K   P   +EF+  + GFL    +++  +  PRGNR +LQT +L K +SID
Sbjct: 606 EVGEQ----KLVGPDLSTEFSSKSEGFLV---FSDALSILPRGNRPNLQTGELDKTLSID 665

Query: 84  YMTEILSPMLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRSSSSSTF 143
           Y+TEILS  LYGTVCTQ                 VEIEL VPDTLPTSAESS S S S  
Sbjct: 666 YVTEILSLRLYGTVCTQVIFSLSTLSVLRDNDVVVEIELLVPDTLPTSAESSESKSRSV- 725

Query: 144 QEGQRVLLEEDDVRWLHAIFRTKLAGGPGEGVTL 160
                 ++  DDV WLH +FR K  GGPG GVT+
Sbjct: 726 -----GIVRGDDVCWLHVVFRAKTVGGPGVGVTI 746

[Close]
BLAST of Spg032786 vs. NCBI nr
Match: TYK08952.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 100.5 bits (249), Expect = 2.1e-17
Identity = 70/170 (41.18%), Postives = 83/170 (48.82%), Query Frame = 0 

Query: 58   EGNKRPRGNRSSLQTRKLAKIISIDYMTEILSPMLYGTVCTQ-----------------V 117
            E    PR NR SLQT +L K +SIDYMTEILS  L GTVCTQ                 V
Sbjct: 1260 EATWEPRENRLSLQTGELDKTLSIDYMTEILSLRLDGTVCTQVIFPLSTLSVLRDNNAVV 1319

Query: 118  EIELPVPDTLPTSAESSRSSSSSTFQ--------------------------EGQRVLLE 177
            EIELPVPDTLPTSAE   S+SS+  +                          EG   ++ 
Sbjct: 1320 EIELPVPDTLPTSAEIFESNSSTWLELYLESVHVEMLFYKPSDVRAASYVCWEGSAGIVR 1379

Query: 178  EDDVRWLHAIFRTKLAGGPGEGVTLIVLFSGTLSLGGGRPKWIEAGLKNY 185
             DDV WLHA+FR K AGGP  GVT  V       +   +  W +  ++NY
Sbjct: 1380 GDDVCWLHAVFRAKTAGGPEGGVTGSVGLKKQDVISEEKKFWTKEEVENY 1429

[Close]
BLAST of Spg032786 vs. NCBI nr
Match: TYK08801.1 (hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 92.4 bits (228), Expect = 5.8e-15
Identity = 90/258 (34.88%), Postives = 108/258 (41.86%), Query Frame = 0 

Query: 6   ENSRERVKEGEEECFYGF---EVGEDRKKLKQRQPWQKSEFNLPTSGFLF--GLSYTEGN 65
           E+  ERVKE EEE F G    ++G+   K    + W     + P    +F   LS  E  
Sbjct: 74  EHFEERVKEEEEE-FRGLRLKKIGKSSCKANHCRIWSTGFSSKPRGFLVFSDALSILEVQ 133

Query: 66  K-------------------RPRGNRSSLQTRKLAKI-ISIDYMTEILSPMLYGTVCTQV 125
           K                    PRGNRSSLQT +L KI ISIDYMTEILS  LYGTVC QV
Sbjct: 134 KSNQKLYWDIESGKSGKWDVMPRGNRSSLQTGQLDKIEISIDYMTEILSLRLYGTVCPQV 193

Query: 126 ---------------------------------------------------------EIE 161
                                                                    EIE
Sbjct: 194 IFPLSTLSVLRDNDAVVSVGQTHYDKDDGVPGGPHYIVGLVNVGCTGRVLHHIDRSLEIE 253

[Close]
BLAST of Spg032786 vs. NCBI nr
Match: KAA0051980.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK04577.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 90.5 bits (223), Expect = 2.2e-14
Identity = 64/153 (41.83%), Postives = 76/153 (49.67%), Query Frame = 0 

Query: 34  QRQPWQKSEFNLPTSGFLFGLSYTEGNKRPRGNRSSLQTRKLAKIISIDYMTEILSPMLY 93
           Q QP Q     +     LFGL Y EG KRPRGNR+SLQT +L K +     T  LS +  
Sbjct: 2   QSQPLQNLGATVNLWFVLFGLGYPEGTKRPRGNRTSLQTGELDKTVIFSLST--LSVLRD 61

Query: 94  GTVCTQVEIELPVPDTLPTSAESSRSSSSSTFQ--------------------------- 153
                 VEIELPVPDTLPTSAESS S+SS+  +                           
Sbjct: 62  NDAV--VEIELPVPDTLPTSAESSGSNSSTWLELNFEFVHVEIFYYFTNQVMSGLHLVFN 121

Query: 154 --EGQRVLLEEDDVRWLHAIFRTKLAGGPGEGV 158
              G   ++  D+V WLHA+F  K AGGPG GV
Sbjct: 122 VSVGSTRIVRGDNVCWLHAVFWAKTAGGPGGGV 150

[Close]
BLAST of Spg032786 vs. ExPASy TrEMBL
Match: A0A5A7UCL6 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold207G00280 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.2e-20
Identity = 74/154 (48.05%), Postives = 89/154 (57.79%), Query Frame = 0 

Query: 24  EVGEDRKKLKQRQPWQKSEFNLPTSGFLFGLSYTEG-NKRPRGNRSSLQTRKLAKIISID 83
           EVGE     K   P   +EF+  + GFL    +++  +  PRGNR +LQT +L K +SID
Sbjct: 606 EVGEQ----KLVGPDLSTEFSSKSEGFLV---FSDALSILPRGNRPNLQTGELDKTLSID 665

Query: 84  YMTEILSPMLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRSSSSSTF 143
           Y+TEILS  LYGTVCTQ                 VEIEL VPDTLPTSAESS S S S  
Sbjct: 666 YVTEILSLRLYGTVCTQVIFSLSTLSVLRDNDVVVEIELLVPDTLPTSAESSESKSRSV- 725

Query: 144 QEGQRVLLEEDDVRWLHAIFRTKLAGGPGEGVTL 160
                 ++  DDV WLH +FR K  GGPG GVT+
Sbjct: 726 -----GIVRGDDVCWLHVVFRAKTVGGPGVGVTI 746

[Close]
BLAST of Spg032786 vs. ExPASy TrEMBL
Match: A0A5D3BRJ2 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00120 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.2e-20
Identity = 74/154 (48.05%), Postives = 89/154 (57.79%), Query Frame = 0 

Query: 24  EVGEDRKKLKQRQPWQKSEFNLPTSGFLFGLSYTEG-NKRPRGNRSSLQTRKLAKIISID 83
           EVGE     K   P   +EF+  + GFL    +++  +  PRGNR +LQT +L K +SID
Sbjct: 606 EVGEQ----KLVGPDLSTEFSSKSEGFLV---FSDALSILPRGNRPNLQTGELDKTLSID 665

Query: 84  YMTEILSPMLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRSSSSSTF 143
           Y+TEILS  LYGTVCTQ                 VEIEL VPDTLPTSAESS S S S  
Sbjct: 666 YVTEILSLRLYGTVCTQVIFSLSTLSVLRDNDVVVEIELLVPDTLPTSAESSESKSRSV- 725

Query: 144 QEGQRVLLEEDDVRWLHAIFRTKLAGGPGEGVTL 160
                 ++  DDV WLH +FR K  GGPG GVT+
Sbjct: 726 -----GIVRGDDVCWLHVVFRAKTVGGPGVGVTI 746

[Close]
BLAST of Spg032786 vs. ExPASy TrEMBL
Match: A0A5D3CCC7 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold314G00430 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.0e-17
Identity = 70/170 (41.18%), Postives = 83/170 (48.82%), Query Frame = 0 

Query: 58   EGNKRPRGNRSSLQTRKLAKIISIDYMTEILSPMLYGTVCTQ-----------------V 117
            E    PR NR SLQT +L K +SIDYMTEILS  L GTVCTQ                 V
Sbjct: 1260 EATWEPRENRLSLQTGELDKTLSIDYMTEILSLRLDGTVCTQVIFPLSTLSVLRDNNAVV 1319

Query: 118  EIELPVPDTLPTSAESSRSSSSSTFQ--------------------------EGQRVLLE 177
            EIELPVPDTLPTSAE   S+SS+  +                          EG   ++ 
Sbjct: 1320 EIELPVPDTLPTSAEIFESNSSTWLELYLESVHVEMLFYKPSDVRAASYVCWEGSAGIVR 1379

Query: 178  EDDVRWLHAIFRTKLAGGPGEGVTLIVLFSGTLSLGGGRPKWIEAGLKNY 185
             DDV WLHA+FR K AGGP  GVT  V       +   +  W +  ++NY
Sbjct: 1380 GDDVCWLHAVFRAKTAGGPEGGVTGSVGLKKQDVISEEKKFWTKEEVENY 1429

[Close]
BLAST of Spg032786 vs. ExPASy TrEMBL
Match: A0A5D3CAC6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold796G00040 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.8e-15
Identity = 90/258 (34.88%), Postives = 108/258 (41.86%), Query Frame = 0 

Query: 6   ENSRERVKEGEEECFYGF---EVGEDRKKLKQRQPWQKSEFNLPTSGFLF--GLSYTEGN 65
           E+  ERVKE EEE F G    ++G+   K    + W     + P    +F   LS  E  
Sbjct: 74  EHFEERVKEEEEE-FRGLRLKKIGKSSCKANHCRIWSTGFSSKPRGFLVFSDALSILEVQ 133

Query: 66  K-------------------RPRGNRSSLQTRKLAKI-ISIDYMTEILSPMLYGTVCTQV 125
           K                    PRGNRSSLQT +L KI ISIDYMTEILS  LYGTVC QV
Sbjct: 134 KSNQKLYWDIESGKSGKWDVMPRGNRSSLQTGQLDKIEISIDYMTEILSLRLYGTVCPQV 193

Query: 126 ---------------------------------------------------------EIE 161
                                                                    EIE
Sbjct: 194 IFPLSTLSVLRDNDAVVSVGQTHYDKDDGVPGGPHYIVGLVNVGCTGRVLHHIDRSLEIE 253

[Close]
BLAST of Spg032786 vs. ExPASy TrEMBL
Match: A0A5A7U9X4 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G002130 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.1e-14
Identity = 64/153 (41.83%), Postives = 76/153 (49.67%), Query Frame = 0 

Query: 34  QRQPWQKSEFNLPTSGFLFGLSYTEGNKRPRGNRSSLQTRKLAKIISIDYMTEILSPMLY 93
           Q QP Q     +     LFGL Y EG KRPRGNR+SLQT +L K +     T  LS +  
Sbjct: 2   QSQPLQNLGATVNLWFVLFGLGYPEGTKRPRGNRTSLQTGELDKTVIFSLST--LSVLRD 61

Query: 94  GTVCTQVEIELPVPDTLPTSAESSRSSSSSTFQ--------------------------- 153
                 VEIELPVPDTLPTSAESS S+SS+  +                           
Sbjct: 62  NDAV--VEIELPVPDTLPTSAESSGSNSSTWLELNFEFVHVEIFYYFTNQVMSGLHLVFN 121

Query: 154 --EGQRVLLEEDDVRWLHAIFRTKLAGGPGEGV 158
              G   ++  D+V WLHA+F  K AGGPG GV
Sbjct: 122 VSVGSTRIVRGDNVCWLHAVFWAKTAGGPGGGV 150

The following BLAST results are available for this feature:
BLAST of Spg032786 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK01784.14.6e-2048.05hypothetical protein E5676_scaffold113G00120 [Cucumis melo var. makuwa][more]
KAA0052217.14.6e-2048.05hypothetical protein E6C27_scaffold207G00280 [Cucumis melo var. makuwa][more]
TYK08952.12.1e-1741.18DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa][more]
TYK08801.15.8e-1534.88hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa][more]
KAA0051980.12.2e-1441.83DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK04577.1 D... [more]
BLAST of Spg032786 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg032786 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UCL62.2e-2048.05Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... [more]
A0A5D3BRJ22.2e-2048.05Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... [more]
A0A5D3CCC71.0e-1741.18DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A5D3CAC62.8e-1534.88Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U9X41.1e-1441.83DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G... [more]
BLAST of Spg032786 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..227
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 110..128
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..128

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg032786.1Spg032786.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043170 macromolecule metabolic process
biological_process GO:0006807 nitrogen compound metabolic process
biological_process GO:0044238 primary metabolic process
molecular_function GO:0003824 catalytic activity