Spg032771 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATACTGTCTTTGCAAATGATAAGGTTGTTGATTTCATATCTCCTTCTGAGGATTGGAACTTAGAGAGGCTTAGCAGAACAGTGACTAGGGATGACTTTGAAGCTATTAGAAGGGTCCCCATCAATGGAAATCTAGAAGATAAGCTAGTGTGGCATTAAGATAAAATAGGAAAATATAGGGTTAAAAGTGGCTACAAGTTTTATATGAACATAAAAATCGATGGAGTTTCTTCTAGTACATCACCTATGCATCAGGTATGGAAAATTTTGTGGAAACTCAGAGTGCCATCCAAAATATAACACTTTTGTTGGAAAGCCCTAAATGAAATTCTACCCAATAGAATAAATTTGCATAAAATAGGAATAAATACTATTAAAAATTGTCCTATGTGTTCTAATCCTAATGAAAATACTGACCACTGTCTATTTGATTGTCATCAAGCAAGGAAAATCTGGAGGAAGACCTTCAATCGAGTGTTCTTGGATGAAGAATTTAATAGAAGCTTTGCGGATCGTTGGCTGAAGATTGATTCGAACTCTACTATGGCGGAGATGGAGCTGGTGGTTGTGACATGTTGGTCAATCTGGAACGACAAAAATAGATTAACTCATGGAGAACAAATCCCTGGTGTAGAGTTCAAAAGCCAATGGATAGTTAATTATCTGGAGAAATACTTACAAGCCAACATGAAGAACAATCCAAGCATCAATTCAAATCCCCAGACAAAATATCCTCAGCTTTCCTCAAGAGTTGGTAACTGGGTGCCTCCCCTTTGTGGATTATTGGAAAATTAACGTCGATGCGGCCTGGATTCCATCAATTCCGACGACTGGTATAGGGGTGATTTTCAGAAACTCCAACGGTGAAGCTATAGCGGCATCTACGATTTCTCTGGATGCTAACATTGGGGCTCCTCTTTTCGCATTAAGGGCTATTTACGAAGGGATGGTTTTTGCCAAGTCTATGGGTTGCTCCAAATGGTAG ATGGATACTGTCTTTGCAAATGATAAGGTTGTTGATTTCATATCTCCTTCTGAGGATTGGAACTTAGAGAGGCTTAGCAGAACAGTGACTAGGGATGACTTTGAAGCTATTAGAAGGGTCCCCATCAATGGAAATCTAGAAGATAAGCTAGTGAAAATCTGGAGGAAGACCTTCAATCGAGTGTTCTTGGATGAAGAATTTAATAGAAGCTTTGCGGATCGTTGGCTGAAGATTGATTCGAACTCTACTATGGCGGAGATGGAGCTGGTGGTTGTGACATGTTGGTCAATCTGGAACGACAAAAATAGATTAACTCATGGAGAACAAATCCCTGGTGTAGACTTTCCTCAAGAGTTGGTAACTGGGTGCCTCCCCTTTGTGGATTATTGGAAAATTAACGTCGATGCGGCCTGGATTCCATCAATTCCGACGACTGGTATAGGGGTGATTTTCAGAAACTCCAACGGTGAAGCTATAGCGGCATCTACGATTTCTCTGGATGCTAACATTGGGGCTCCTCTTTTCGCATTAAGGGCTATTTACGAAGGGATGGTTTTTGCCAAGTCTATGGGTTGCTCCAAATGGTAG ATGGATACTGTCTTTGCAAATGATAAGGTTGTTGATTTCATATCTCCTTCTGAGGATTGGAACTTAGAGAGGCTTAGCAGAACAGTGACTAGGGATGACTTTGAAGCTATTAGAAGGGTCCCCATCAATGGAAATCTAGAAGATAAGCTAGTGAAAATCTGGAGGAAGACCTTCAATCGAGTGTTCTTGGATGAAGAATTTAATAGAAGCTTTGCGGATCGTTGGCTGAAGATTGATTCGAACTCTACTATGGCGGAGATGGAGCTGGTGGTTGTGACATGTTGGTCAATCTGGAACGACAAAAATAGATTAACTCATGGAGAACAAATCCCTGGTGTAGACTTTCCTCAAGAGTTGGTAACTGGGTGCCTCCCCTTTGTGGATTATTGGAAAATTAACGTCGATGCGGCCTGGATTCCATCAATTCCGACGACTGGTATAGGGGTGATTTTCAGAAACTCCAACGGTGAAGCTATAGCGGCATCTACGATTTCTCTGGATGCTAACATTGGGGCTCCTCTTTTCGCATTAAGGGCTATTTACGAAGGGATGGTTTTTGCCAAGTCTATGGGTTGCTCCAAATGGTAG MDTVFANDKVVDFISPSEDWNLERLSRTVTRDDFEAIRRVPINGNLEDKLVKIWRKTFNRVFLDEEFNRSFADRWLKIDSNSTMAEMELVVVTCWSIWNDKNRLTHGEQIPGVDFPQELVTGCLPFVDYWKINVDAAWIPSIPTTGIGVIFRNSNGEAIAASTISLDANIGAPLFALRAIYEGMVFAKSMGCSKW Homology
BLAST of Spg032771 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia]) HSP 1 Score: 75.9 bits (185), Expect = 4.4e-10 Identity = 51/165 (30.91%), Postives = 74/165 (44.85%), Query Frame = 0
BLAST of Spg032771 vs. NCBI nr
Match: XP_022155289.1 (uncharacterized protein LOC111022426 [Momordica charantia]) HSP 1 Score: 75.1 bits (183), Expect = 7.5e-10 Identity = 50/166 (30.12%), Postives = 81/166 (48.80%), Query Frame = 0
BLAST of Spg032771 vs. NCBI nr
Match: XP_023884264.1 (uncharacterized protein LOC111996510 [Quercus suber]) HSP 1 Score: 67.4 bits (163), Expect = 1.6e-07 Identity = 43/132 (32.58%), Postives = 69/132 (52.27%), Query Frame = 0
BLAST of Spg032771 vs. NCBI nr
Match: XP_023874626.1 (uncharacterized protein LOC111987155 [Quercus suber]) HSP 1 Score: 65.1 bits (157), Expect = 7.7e-07 Identity = 45/167 (26.95%), Postives = 73/167 (43.71%), Query Frame = 0
BLAST of Spg032771 vs. NCBI nr
Match: XP_016649695.1 (PREDICTED: uncharacterized protein LOC107881115 [Prunus mume]) HSP 1 Score: 64.7 bits (156), Expect = 1.0e-06 Identity = 40/123 (32.52%), Postives = 60/123 (48.78%), Query Frame = 0
BLAST of Spg032771 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 2.1e-10 Identity = 51/165 (30.91%), Postives = 74/165 (44.85%), Query Frame = 0
BLAST of Spg032771 vs. ExPASy TrEMBL
Match: A0A6J1DPU1 (uncharacterized protein LOC111022426 OS=Momordica charantia OX=3673 GN=LOC111022426 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 3.6e-10 Identity = 50/166 (30.12%), Postives = 81/166 (48.80%), Query Frame = 0
BLAST of Spg032771 vs. ExPASy TrEMBL
Match: A0A803NGI9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 6.4e-07 Identity = 47/165 (28.48%), Postives = 75/165 (45.45%), Query Frame = 0
BLAST of Spg032771 vs. ExPASy TrEMBL
Match: A0A5E4FZN9 (PREDICTED: retrotransposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B007697 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 1.4e-06 Identity = 50/173 (28.90%), Postives = 70/173 (40.46%), Query Frame = 0
BLAST of Spg032771 vs. ExPASy TrEMBL
Match: A0A0Q3GGJ7 (RNase H domain-containing protein OS=Brachypodium distachyon OX=15368 GN=BRADI_2g53033v3 PE=4 SV=2) HSP 1 Score: 61.2 bits (147), Expect = 5.4e-06 Identity = 39/126 (30.95%), Postives = 57/126 (45.24%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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