Spg032754 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg032754
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold11: 8670944 .. 8672398 (+)
RNA-Seq ExpressionSpg032754
SyntenySpg032754
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTAAAACAAGAGGGAAGAGAAAAAGGGAGGCTGAGGAAGAGGAAGTGTCTGTTACACCAGATGCACCGAAGAAGAAAACCAAAAAGAAGAGAACACCACAGGAGAAGGACGCCAAACGTTTAAGGAAATAGCAGCAATCTTCAATCAATGAGGTTCTTCAGAAAGTAATTGAAGATGCAGCGGAAGAAGTGGTTGGAGAAGAACCACCAAAATCCCTTGAAGTAGAAAAAATTCTAGAGCCGTCTGGACCGCAAGTTGAAGGTCAGCAAGAAGGTCAAGAACAACAAGCAGTGGTAACAGAGGAGGTTATTCCGATACAACCGCCATGCAGCCGGCGCAAGCAGAAGGCGGGGCAGGTACGTATTGACACCCCATCTCCTCCAACCACTGAATCTGAGAAAGAAAATACTGAGGCGGAAATTCAAGAAAATGTGGAAAATGTGAGAAAGGCTGAAGAAGACGAGACGGTTGAGAAGAGAAACGAGGACAAAGGCAAAGGTATTGCTGAAGCATAAGTAGAAGAAGAGGAACCAGACGAACAGCATTTGCCCTACGAGCGCTTCGTCAACAATCTTGCGCGAGCAAAATATCGCAACATGCTCAAACGCGATTTTCTGTTCGAACGAGGTTTTGGCGCGGATCTACCTCATTTCTTGAGAGCTGGAATTACGAATCATAGTTCATTGATGAGGAAGAAGGATTTCAGGTAATTGTTCGCGGAGTAGCAATAGACTAGAGCCCTAGGGCAATCAACTCCTTATTCAATCTGCAAGATTTTCCGTTGTGAGAGCAGTGGGGATTGAAGGGGCACAGTGGAGGCTCTTGAAGACGGAGAAGAGGACTTTTCAAGCTGCCTATCTCAAGAGCGAGGCAATCACATGGCTGGGATTCGTCAAACTGTGCCTGCTCCCAACTACACATGATTCAACAGTATCTCGTGACCGGGTTCTTCTAGTATTTGCAATTCTCAGATCTCTCAGTATCGATGTTGACAAAAATAATCTCCAGTGAAATTCATAATTTGCTGGAGGAAAAAGATTGGCAAGTTGTTCTTCCCCAACACAATTACAATGTTATGTCAAAGGACAGAAGTTCCAACGAGCAATGAAGATATTATTTTGATGGACAAGGGGATTATTGACACACCAAACCTGGCGAGGCTGCAAAGGACTCAGGAAGCGCGCCATGGTGGTTTGGTGTGTGGCATCCATAGTATGTAGGAGAAATTGCAACTGGTGCTCAGTCGTTTGGAATTCTCTGAAAGGCTGAATCAAACGTACTGGAACTATGCGAAAAGAAGGGATTTCACCACTAAGAAGGCCTTGCAAGCTAATTTTTCTAAATCTTATCAAGCTTACCCCATATTCCCTGATGACCTTATGAATCCTTGGATCCCGCCCCCGCCAATTGAGAGAGAAGAAGATGAAAAAGAGGCTGGCCAAGAGGATTGA

mRNA sequence

ATGTCTAAAACAAGAGGGAAGAGAAAAAGGGAGGCTGAGGAAGAGGAAGTGTCTGTTACACCAGATGCACCGAAGAAGAAAACCAAAAAGAAGAGAACACCACAGGAGAAGGACGCCAAACCGGAAGAAGTGGTTGGAGAAGAACCACCAAAATCCCTTGAAGTAGAAAAAATTCTAGAGCCGTCTGGACCGCAAGTTGAAGGTCAGCAAGAAGGTCAAGAACAACAAGCAGTGGTAACAGAGGAGGTTATTCCGATACAACCGCCATGCAGCCGGCGCAAGCAGAAGGCGGGGCAGGTACGTATTGACACCCCATCTCCTCCAACCACTGAATCTGAGAAAGAAAATACTGAGGCGGAAATTCAAGAAAATGTGGAAAATGTGAGAAAGGCTGAAGAAGACGAGACGGTTGAGAAGAGAAACGAGGACAAAGGCAAAGGTTTTGGCGCGGATCTACCTCATTTCTTGAGAGCTGGAATTACGAATCATAGTTCATTGATGAGGAAGAAGGATTTCAGAGCAGTGGGGATTGAAGGGGCACAGTGGAGGCTCTTGAAGACGGAGAAGAGGACTTTTCAAGCTGCCTATCTCAAGAGCGAGGCAATCACATGGCTGGGATTCGTCAAACTGTGCCTGCTCCCAACTACACATGATTCAACAGTATCTCGTGACCGGGAGAAATTGCAACTGGTGCTCAGTCGTTTGGAATTCTCTGAAAGGCTGAATCAAACGTACTGGAACTATGCGAAAAGAAGGGATTTCACCACTAAGAAGGCCTTGCAAGCTAATTTTTCTAAATCTTATCAAGCTTACCCCATATTCCCTGATGACCTTATGAATCCTTGGATCCCGCCCCCGCCAATTGAGAGAGAAGAAGATGAAAAAGAGGCTGGCCAAGAGGATTGA

Coding sequence (CDS)

ATGTCTAAAACAAGAGGGAAGAGAAAAAGGGAGGCTGAGGAAGAGGAAGTGTCTGTTACACCAGATGCACCGAAGAAGAAAACCAAAAAGAAGAGAACACCACAGGAGAAGGACGCCAAACCGGAAGAAGTGGTTGGAGAAGAACCACCAAAATCCCTTGAAGTAGAAAAAATTCTAGAGCCGTCTGGACCGCAAGTTGAAGGTCAGCAAGAAGGTCAAGAACAACAAGCAGTGGTAACAGAGGAGGTTATTCCGATACAACCGCCATGCAGCCGGCGCAAGCAGAAGGCGGGGCAGGTACGTATTGACACCCCATCTCCTCCAACCACTGAATCTGAGAAAGAAAATACTGAGGCGGAAATTCAAGAAAATGTGGAAAATGTGAGAAAGGCTGAAGAAGACGAGACGGTTGAGAAGAGAAACGAGGACAAAGGCAAAGGTTTTGGCGCGGATCTACCTCATTTCTTGAGAGCTGGAATTACGAATCATAGTTCATTGATGAGGAAGAAGGATTTCAGAGCAGTGGGGATTGAAGGGGCACAGTGGAGGCTCTTGAAGACGGAGAAGAGGACTTTTCAAGCTGCCTATCTCAAGAGCGAGGCAATCACATGGCTGGGATTCGTCAAACTGTGCCTGCTCCCAACTACACATGATTCAACAGTATCTCGTGACCGGGAGAAATTGCAACTGGTGCTCAGTCGTTTGGAATTCTCTGAAAGGCTGAATCAAACGTACTGGAACTATGCGAAAAGAAGGGATTTCACCACTAAGAAGGCCTTGCAAGCTAATTTTTCTAAATCTTATCAAGCTTACCCCATATTCCCTGATGACCTTATGAATCCTTGGATCCCGCCCCCGCCAATTGAGAGAGAAGAAGATGAAAAAGAGGCTGGCCAAGAGGATTGA

Protein sequence

MSKTRGKRKREAEEEEVSVTPDAPKKKTKKKRTPQEKDAKPEEVVGEEPPKSLEVEKILEPSGPQVEGQQEGQEQQAVVTEEVIPIQPPCSRRKQKAGQVRIDTPSPPTTESEKENTEAEIQENVENVRKAEEDETVEKRNEDKGKGFGADLPHFLRAGITNHSSLMRKKDFRAVGIEGAQWRLLKTEKRTFQAAYLKSEAITWLGFVKLCLLPTTHDSTVSRDREKLQLVLSRLEFSERLNQTYWNYAKRRDFTTKKALQANFSKSYQAYPIFPDDLMNPWIPPPPIEREEDEKEAGQED
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 114..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 282..301
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..148

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg032754.1Spg032754.1mRNA