Spg032706 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg032706
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Locationscaffold11: 8401709 .. 8404477 (+)
RNA-Seq ExpressionSpg032706
SyntenySpg032706
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGAAATTTCCTCTTCCCGATGATGAAAAACAAGGTTCCAAGAATCAACCTTTGAGGGCTTGCAACAAAGCTTTGTTGGTGAAATGGTTAAGGCGGTTCTCCACCGATTCCAACACCCTCTGGCATAGGATCATTGTTAGAAAATACGGTTCTCATCCTCTCGAATGGGTGTCGGGTGGGATCAAAGGCACTTCTAGAAACCCTTGGAAAGAGATCTCTTTAGAGCTCCCTTCGATGACTGCTTTTATTTCACACTCTTTGGGAAACAGGGAGGAAACTTATTTCTTGGAGGATAGATGGGTGGGGGATAGACCTCTCTGTGCTGCTTTTCCTCGACTTTATCACTTATCTTTGATGAAAAATCACTCTGTGGCAGAGGTTCTCAATCTTTTTGGGGGCACTCCTTATTCTTTTGGCTGCGAAACTATGGATATCCTGGCTCTCCTTTCTCTGATAGGGGAAGTCACCTTTAGACTGGATAGGAGGGATTGTTGCCGCTCTTTTTTTCATTGCCTCTTGAATCCGACTGAGGAGTCAATCTTTTCCTTGATATGGAAGGTGAAAGTCCTAAAGAAGGTGCAATTTTTTATCTGGCAGGTTCTCCATGGAAGAGTTAATACTCTTGATCGTTATCGAGAAGGATGCCGACCTTGATCGGCTCGTTTTGTTTGTATCCTTTGCTGGATGGCAAGGGAAGACCTTGATCACATGTTATGGAGATGCAATTTTGCTAGGTCGGTGTGGGACGCGTTCTTCTAGATGTTTGACTTGTAGTTTGCCAGACATAGGAGCATTAGGGAGATGATCAAGGAGTTCCTTCCCCATCTGTCTTATTGTGAGAGGGGGAACTTGTTATGGCAGACGGGAATTTGTGCTATTGTTTGGGGGCTTTGGGGAGAGAGAAACAATAGAATTTTTAGAGGGTCGGATAGAAGTCCTAATGATGTATGGACCTTGGCTAAATATCATGTTTCTCCTTAGGCGTCGGTGACACACTTATTTTGTAATTATCCTATAGGTCTTATTCTTTTGGATTGGAGGCCCTTTTTATGATGGAGTTTCATCTCTTGGGGGGCTTGGTTTCTTTTGTTCACCCTTGTACTCTTTCATTTTTTTCTCAATGAATTTTTAAATGAAGTTCTTATGTTTAAAGGCTTCGGGGAGAGGTGGAGACGATGGATTAGAGGGTGCCTTAGAAATTCTAATTTCTCCATCGTGGTAAATGGTAGACCAAGAGGAAAATTTTTTGCTTCTCGTGGGCTTAGACAGGGGGACCCCTTATCCCCTCTCCTTTTCACCTTAGTTGGAGATGCCGTGTGTAAATCTGTTCAGTATTGTTTGGAAAAAAAGATTTTAACGGGTTGGAAAGTTGGGAAGAATAGGGTGGAGGTGTCAATGCTCCAATATGCTGATGACACGCTGTTTTTCTGTCCAAATTCCGAGCCAGAGTTGATCGAATGGAGAGATATTGCCAAGACTATTTTGGAAGGTTCAGGGCCATGTAATCAACATGGCCAAATCCTCTTTGATTGGCATAAACGTTAGTGAGCAGGAGCTGTCCAATTGGACCAATATTTTCGATTGTCAAGCTGGTGCGCTGCCTTGCAATTATCTGGGCTTTCCTCTTGGTGGGAATTATCATAGAAGAAGGTTTTGGGACCCGCTTTTAGAGAGGGTTGAGAAGAAAATTGACAAATGGAAACATTTCCCAATGTCCAAAGGTGGTAGGGTGACCCTCGCTCAATCTGTTTTAACTAGCCTCCCTTTATATCACTTCTCTTTGCTCAAAGCTCCTAAATCAGTTATCAAGGCCATGGAAAAGCTGATTAGAAACTTTGTGTGGAATGGTGGCCAATCTAAACCAAGCTCTAACCTTGTCAAGTGGGAATGGTCCTCGCTTCCGACCAATCTAGGGGGCTTGGGCATTGGCTCCCTTGCCCAAAGGAATGTGGCGCTCATGTCGAAATGGCTGTGGAGGTTCTCTAAGGAAGATGATTCGCTGTGGAAAAAGATTATTGTAAGTATTTATGGGTTCTCTCCTTGCGGGCGGAAAACCATCCAGTTTAAAGGCAAAAAAGGAAATCGGATTGGGTAGATATAGCTGCCAACTACCACACTTTTGATCCTTGTGTCAAGCTCACGGTCAACAACGGTAGATGCATAAAATTCTGGGAGGATGGCTGGTGTGATGACCAACCCCTCAAGACCCTATACCCGGACCTATACATCATCTCTAATAAAAAAGGGGCAACCGTGGCTGATTGTTGGAAGGCTGAGTCTCTAACTTGGGACTTGGATTTTTGAAGGGGCCTTTTTGAAAGAGAGATTCCTAGTTGGTTGGCCTTGCTGGACAAAATTAAGGATGTGAGGCTGCTGGACGAGCAAGACCACTTGAGTTGGAAGTTGGAGAAGTCAGGTATTTACTCGACCAAATCTATGTTTCAATTGTTGACTCGTCCATCCCCTAAAGTGAATCAAGCCACTAGTTCGTTGATATGGAAGCATAAAAGCCCTAAGAAGGTGAAGGTGTTCCTCTGGTCCCTTGCTTACAGAAGCCTTAATACTGATGAAAAGCTTCAAAAAAAATTCAGCAATTGGTCCCTTCTCCCCTCGGCTTGCAGGATGTGTTTGAAAGATGCAGAAAACTTGGACCACCTCTTTTTGCATTGTGAGTTCGCTAGTAAAGCTTGGTGTTTTGTTGCTAAGCTTCTGGGTATTTCGTTTTGTGCCCCTAAGAAGATCGATGATTGTCAAGAGGAAGGCTAG

mRNA sequence

ATGCAGAAATTTCCTCTTCCCGATGATGAAAAACAAGGTTCCAAGAATCAACCTTTGAGGGCTTGCAACAAAGCTTTGTTGGTGAAATGGTTAAGGCGGTTCTCCACCGATTCCAACACCCTCTGGCATAGGATCATTGTTAGAAAATACGGTTCTCATCCTCTCGAATGGGTGTCGGGTGGGATCAAAGGCACTTCTAGAAACCCTTGGAAAGAGATCTCTTTAGAGCTCCCTTCGATGACTGCTTTTATTTCACACTCTTTGGGAAACAGGGAGGAAACTTATTTCTTGGAGGATAGATGGGTGGGGGATAGACCTCTCTGTGCTGCTTTTCCTCGACTTTATCACTTATCTTTGATGAAAAATCACTCTGTGGCAGAGGTTCTCAATCTTTTTGGGGGCACTCCTTATTCTTTTGGCTGCGAAACTATGGATATCCTGGCTCTCCTTTCTCTGATAGGGGAAGTCACCTTTAGACTGGATAGGAGGGATTGTTGCCGCTCTTTTTTTCATTGCCTCTTGAATCCGACTGAGGAGTCAATCTTTTCCTTGATATGGAAGGATGCCGACCTTGATCGGCTCGTTTTGTTTGTATCCTTTGCTGGATGGCAAGGGAAGACCTTGATCACATGTTATGGAGATGCAATTTTGCTAGGTCGGGGCCTTTTTGAAAGAGAGATTCCTAGTTGGTTGGCCTTGCTGGACAAAATTAAGGATGTGAGGCTGCTGGACGAGCAAGACCACTTGAGTTGGAAGTTGGAGAAGTCAGGTATTTACTCGACCAAATCTATGTTTCAATTGTTGACTCGTCCATCCCCTAAAGTGAATCAAGCCACTAGTTCGTTGATATGGAAGCATAAAAGCCCTAAGAAGGTGAAGGTGTTCCTCTGGTCCCTTGCTTACAGAAGCCTTAATACTGATGAAAAGCTTCAAAAAAAATTCAGCAATTGGTCCCTTCTCCCCTCGGCTTGCAGGATGTGTTTGAAAGATGCAGAAAACTTGGACCACCTCTTTTTGCATTGTGAGTTCGCTAGTAAAGCTTGGTGTTTTGTTGCTAAGCTTCTGGGTATTTCGTTTTGTGCCCCTAAGAAGATCGATGATTGTCAAGAGGAAGGCTAG

Coding sequence (CDS)

ATGCAGAAATTTCCTCTTCCCGATGATGAAAAACAAGGTTCCAAGAATCAACCTTTGAGGGCTTGCAACAAAGCTTTGTTGGTGAAATGGTTAAGGCGGTTCTCCACCGATTCCAACACCCTCTGGCATAGGATCATTGTTAGAAAATACGGTTCTCATCCTCTCGAATGGGTGTCGGGTGGGATCAAAGGCACTTCTAGAAACCCTTGGAAAGAGATCTCTTTAGAGCTCCCTTCGATGACTGCTTTTATTTCACACTCTTTGGGAAACAGGGAGGAAACTTATTTCTTGGAGGATAGATGGGTGGGGGATAGACCTCTCTGTGCTGCTTTTCCTCGACTTTATCACTTATCTTTGATGAAAAATCACTCTGTGGCAGAGGTTCTCAATCTTTTTGGGGGCACTCCTTATTCTTTTGGCTGCGAAACTATGGATATCCTGGCTCTCCTTTCTCTGATAGGGGAAGTCACCTTTAGACTGGATAGGAGGGATTGTTGCCGCTCTTTTTTTCATTGCCTCTTGAATCCGACTGAGGAGTCAATCTTTTCCTTGATATGGAAGGATGCCGACCTTGATCGGCTCGTTTTGTTTGTATCCTTTGCTGGATGGCAAGGGAAGACCTTGATCACATGTTATGGAGATGCAATTTTGCTAGGTCGGGGCCTTTTTGAAAGAGAGATTCCTAGTTGGTTGGCCTTGCTGGACAAAATTAAGGATGTGAGGCTGCTGGACGAGCAAGACCACTTGAGTTGGAAGTTGGAGAAGTCAGGTATTTACTCGACCAAATCTATGTTTCAATTGTTGACTCGTCCATCCCCTAAAGTGAATCAAGCCACTAGTTCGTTGATATGGAAGCATAAAAGCCCTAAGAAGGTGAAGGTGTTCCTCTGGTCCCTTGCTTACAGAAGCCTTAATACTGATGAAAAGCTTCAAAAAAAATTCAGCAATTGGTCCCTTCTCCCCTCGGCTTGCAGGATGTGTTTGAAAGATGCAGAAAACTTGGACCACCTCTTTTTGCATTGTGAGTTCGCTAGTAAAGCTTGGTGTTTTGTTGCTAAGCTTCTGGGTATTTCGTTTTGTGCCCCTAAGAAGATCGATGATTGTCAAGAGGAAGGCTAG

Protein sequence

MQKFPLPDDEKQGSKNQPLRACNKALLVKWLRRFSTDSNTLWHRIIVRKYGSHPLEWVSGGIKGTSRNPWKEISLELPSMTAFISHSLGNREETYFLEDRWVGDRPLCAAFPRLYHLSLMKNHSVAEVLNLFGGTPYSFGCETMDILALLSLIGEVTFRLDRRDCCRSFFHCLLNPTEESIFSLIWKDADLDRLVLFVSFAGWQGKTLITCYGDAILLGRGLFEREIPSWLALLDKIKDVRLLDEQDHLSWKLEKSGIYSTKSMFQLLTRPSPKVNQATSSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSNWSLLPSACRMCLKDAENLDHLFLHCEFASKAWCFVAKLLGISFCAPKKIDDCQEEG
Homology
BLAST of Spg032706 vs. NCBI nr
Match: VVA30963.1 (Hypothetical predicted protein, partial [Prunus dulcis])

HSP 1 Score: 151.0 bits (380), Expect = 2.0e-32
Identity = 108/343 (31.49%), Postives = 148/343 (43.15%), Query Frame = 0

Query: 19  LRACNKALLVKWLRRFSTDSNTLWHRIIVRKYGSHPLEWVSGGI-KGTSRNPWKEISLEL 78
           LR  N+AL  KWL RF  ++N+LWHRII  KYG     W +  I K + RNPW+EIS   
Sbjct: 183 LRERNEALRAKWLWRFPLETNSLWHRIIKSKYGIDSNGWDTKQIVKVSCRNPWREISKGY 242

Query: 79  PSMTAFISHSLGNREETYFLEDRWVGDRPLCAAFPRLYHLSLMKNHSVAEVLNLFGGTPY 138
            S       S+GN E+  F ED W+ +  L   FPRL  LS  KN S+A   N       
Sbjct: 243 NSFLQCCRFSVGNGEKIRFWEDLWLKEGILKDLFPRLSSLSRRKNQSIARFAN------- 302

Query: 139 SFGCETMDILALLSLIGEVTFRLDRRDCCRSFFHCLLNPTEESIFSLIWKDADLDRLVLF 198
                                                         L W   D D     
Sbjct: 303 -----------------------------------------NHEMPLNW---DFD----- 362

Query: 199 VSFAGWQGKTLITCYGDAILLGRGLFEREIPSWLALLDKIKDVRLLDEQ-DHLSWKLEKS 258
                                 R L E EI   + LLD + +VRL   + D  SW++E+ 
Sbjct: 363 --------------------FRRNLSEAEIAEVVILLDILGNVRLYGSRPDRRSWEIEEQ 422

Query: 259 GIYSTKSMFQLLTRPSPKVNQATSSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSN 318
           G +S KS    L   +  V    SS IWK K+P K++ F+W  A   +NT + +Q++   
Sbjct: 423 GSFSCKSFRSFLLSTTRDVFPPFSS-IWKAKTPPKIQFFVWLAANGRINTCDCIQRRQPK 448

Query: 319 WSLLPSACRMCLKDAENLDHLFLHCEFASKAWCFVAKLLGISF 360
             L PS C +C ++AEN+DHLF+HC ++ K W  +   LG+ +
Sbjct: 483 MCLSPSWCVLCKENAENIDHLFIHCSYSLKLWWRMLGALGVEW 448

BLAST of Spg032706 vs. NCBI nr
Match: BBN69274.1 (TatD related DNase [Prunus dulcis])

HSP 1 Score: 151.0 bits (380), Expect = 2.0e-32
Identity = 109/347 (31.41%), Postives = 147/347 (42.36%), Query Frame = 0

Query: 19  LRACNKALLVKWLRRFSTDSNTLWHRIIVRKYGSHPLEWVSGGI-KGTSRNPWKEISLEL 78
           LR  N+AL  KWL RF  ++N+LWHRII  KYG     W +  I K + RNPW+EIS   
Sbjct: 617 LRERNEALRAKWLWRFPLETNSLWHRIIKSKYGLDSNGWDTKQIDKVSCRNPWREISKGY 676

Query: 79  PSMTAFISHSLGNREETYFLEDRWVGDRPLCAAFPRLYHLSLMKNHSVAEVLNLFGGTPY 138
            S       S+GN E+  F ED W+ +  L   FPRLY LS  KN  +A   N       
Sbjct: 677 ISFLQCCRFSVGNGEKIRFWEDFWLKEGILKDLFPRLYSLSRRKNQCIAWFAN------- 736

Query: 139 SFGCETMDILALLSLIGEVTFRLDRRDCCRSFFHCLLNPTEESIFSLIWKDADLDRLVLF 198
                                                         L W   D D     
Sbjct: 737 -----------------------------------------NHEMPLNW---DFD----- 796

Query: 199 VSFAGWQGKTLITCYGDAILLGRGLFEREIPSWLALLDKIKDVRLLDEQ-DHLSWKLEKS 258
                                 R L E EI   + LLD + +VRL   + D  SW++E+ 
Sbjct: 797 --------------------FRRNLSEAEIAEVVLLLDILGNVRLFGSRPDRRSWEIEEQ 856

Query: 259 GIYSTKSMFQLLTRPSPKVNQATSSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSN 318
           G +S KS    L   +  V     S IWK K+P K++ F+W  A   +NT + +Q++   
Sbjct: 857 GSFSCKSFRSFLISTTSVVFPPYRS-IWKAKTPPKIQFFVWLAANGRINTCDCIQRRQPK 886

Query: 319 WSLLPSACRMCLKDAENLDHLFLHCEFASKAWCFVAKLLGISFCAPK 364
             L PS C  C ++AEN+DHLF+HC ++ K W  +   LG  +  PK
Sbjct: 917 MCLSPSWCVFCKENAENIDHLFIHCSYSLKLWWRMLDALGAEWVIPK 886

BLAST of Spg032706 vs. NCBI nr
Match: RVW91473.1 (hypothetical protein CK203_038540 [Vitis vinifera])

HSP 1 Score: 150.6 bits (379), Expect = 2.7e-32
Identity = 96/346 (27.75%), Postives = 148/346 (42.77%), Query Frame = 0

Query: 23   NKALLVKWLRRFSTDSNTLWHRIIVRKYGSHPLEWVSGG-IKGTSRNPWKEISLELPSMT 82
            N ALL KWL R+  + + LWH++I+  YGSH   W +   ++ + R PWK I+      +
Sbjct: 1263 NLALLGKWLWRYLREGSALWHQVILSIYGSHSNGWDANTLVRWSHRCPWKAIAQVFQGFS 1322

Query: 83   AFISHSLGNREETYFLEDRWVGDRPLCAAFPRLYHLSLMKNHSVAEVLNLFGGTPYSFGC 142
             F  + +GNRE   F ED W GD+PL   +PRL+ + + KN S++ VL      P+S+  
Sbjct: 1323 LFTRYVVGNRERIRFWEDLWWGDQPLRIQYPRLFRVVMDKNISISSVLG--PSRPFSWNL 1382

Query: 143  ETMDILALLSLIGEVTFRLDRRDCCRSFFHCLLNPTEESIFSLIWKDADLDRLVLFVSFA 202
                                      +F   L +   E +  L+W   DL          
Sbjct: 1383 --------------------------NFRRNLSDSEIEDLEGLMWSLDDLH--------- 1442

Query: 203  GWQGKTLITCYGDAILLGRGLFEREIPSWLALLDKIKDVRLLDEQDHLSWKLEKSGIYST 262
                                           L   + D RL        W L  SG++S 
Sbjct: 1443 -------------------------------LSPSVPDARL--------WPLSSSGLFSL 1502

Query: 263  KSMFQLLTRPSPKVNQATSSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSNWSLLP 322
            KS F  L++ S       S ++W  + P K K F+W +A++ +NT++ LQ +    +L P
Sbjct: 1503 KSFFLALSQSSGSPQDFPSKIVWNSQVPFKAKSFVWLVAHKKVNTNDMLQVRRPYKALSP 1532

Query: 323  SACRMCLKDAENLDHLFLHCEFASKAWCFVAKLLGISFCAPKKIDD 368
              C +C+K  E+ DHLFLHC      W  + +L  + +  P+ I D
Sbjct: 1563 DICILCMKHGESTDHLFLHCSLTIGLWHRLFQLAKMDWVPPRSIYD 1532

BLAST of Spg032706 vs. NCBI nr
Match: CAN75609.1 (hypothetical protein VITISV_002943 [Vitis vinifera])

HSP 1 Score: 150.6 bits (379), Expect = 2.7e-32
Identity = 95/347 (27.38%), Postives = 145/347 (41.79%), Query Frame = 0

Query: 23  NKALLVKWLRRFSTDSNTLWHRIIVRKYGSHPLEW-VSGGIKGTSRNPWKEISLELPSMT 82
           N ALL KWL RF  + + LWH++I   YG+HP  W  +  ++ + R PWK I+      +
Sbjct: 717 NSALLGKWLWRFPRERSGLWHKVIASIYGTHPNGWDANMVVRWSHRCPWKAIAQVFQKFS 776

Query: 83  AFISHSLGNREETYFLEDRWVGDRPLCAAFPRLYHLSLMKNHSVAEVLNLFGGTPYSFGC 142
            F+   +GN E   F ED W G++ LCA F  LY +S ++N +V+ VL            
Sbjct: 777 PFVRLVVGNGERIRFWEDLWWGNQTLCAQFAELYRVSSVRNLTVSNVLG----------- 836

Query: 143 ETMDILALLSLIGEVTFRLDRRDCCRSFFHCLLNPTEESIFSLIWKDADLDRLVLFVSFA 202
                                                 + F L W               
Sbjct: 837 --------------------------------------NSFPLSWN-------------- 896

Query: 203 GWQGKTLITCYGDAILLGRGLFEREIPSWLALLDKIKDVRLL-DEQDHLSWKLEKSGIYS 262
                             R L + EI  +  L+  +  V L     D  +W L  SG +S
Sbjct: 897 --------------FNFRRNLTDSEIDLFQRLMSSLHSVLLSPSSSDSRAWSLSSSGSFS 956

Query: 263 TKSMFQLLTRPSPKVNQATSSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSNWSLL 322
            KS F  L++ S  +    +  +W  K P KVK   W +A+  +NT++KLQ +    +L 
Sbjct: 957 VKSFFYALSKDSNPLMFLPAKFLWSSKVPSKVKALAWLVAHGKVNTNDKLQLRRPYKALC 986

Query: 323 PSACRMCLKDAENLDHLFLHCEFASKAWCFVAKLLGISFCAPKKIDD 368
           P  C +C ++ E++DHLFLHC      W  +  L+G+ +  P+ I+D
Sbjct: 1017 PQWCILCKRNGESIDHLFLHCPVTIGLWHRLFNLVGVIWVPPRSIED 986

BLAST of Spg032706 vs. NCBI nr
Match: CAN75156.1 (hypothetical protein VITISV_042643 [Vitis vinifera])

HSP 1 Score: 149.8 bits (377), Expect = 4.6e-32
Identity = 95/347 (27.38%), Postives = 144/347 (41.50%), Query Frame = 0

Query: 23  NKALLVKWLRRFSTDSNTLWHRIIVRKYGSHPLEW-VSGGIKGTSRNPWKEISLELPSMT 82
           N ALL KWL RF  + + LWH++I   YG+HP  W  +  ++ + R PWK I+      +
Sbjct: 368 NSALLGKWLWRFPRERSGLWHKVIASIYGTHPNGWDANMVVRWSHRCPWKAIAQVFQEFS 427

Query: 83  AFISHSLGNREETYFLEDRWVGDRPLCAAFPRLYHLSLMKNHSVAEVLNLFGGTPYSFGC 142
            F+   +GN E   F ED W G++ LCA F  LY +S ++N +V+ VL            
Sbjct: 428 PFVRLVVGNGERIXFWEDLWWGNQTLCAQFAELYRVSSVRNLTVSNVLG----------- 487

Query: 143 ETMDILALLSLIGEVTFRLDRRDCCRSFFHCLLNPTEESIFSLIWKDADLDRLVLFVSFA 202
                                                 + F L W               
Sbjct: 488 --------------------------------------NSFPLSWN-------------- 547

Query: 203 GWQGKTLITCYGDAILLGRGLFEREIPSWLALLDKIKDVRLL-DEQDHLSWKLEKSGIYS 262
                             R L + EI     L+  +  V L     D  +W L  SG +S
Sbjct: 548 --------------FNFRRNLTDSEIDLLQRLMSSLHSVLLSPSSSDSRAWSLSSSGSFS 607

Query: 263 TKSMFQLLTRPSPKVNQATSSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSNWSLL 322
            KS F  L++ S  +    +  +W  K P KVK   W +A+  +NT++KLQ +    +L 
Sbjct: 608 VKSFFYALSKDSNPLMFLPAKFLWSSKVPSKVKALAWLVAHGKVNTNDKLQLRRPYKALC 637

Query: 323 PSACRMCLKDAENLDHLFLHCEFASKAWCFVAKLLGISFCAPKKIDD 368
           P  C +C ++ E++DHLFLHC      W  +  L+G+ +  P+ I+D
Sbjct: 668 PQWCILCKRNGESIDHLFLHCPVTIGLWHRLFNLVGVIWVPPRSIED 637

BLAST of Spg032706 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.4e-07
Identity = 30/105 (28.57%), Postives = 59/105 (56.19%), Query Frame = 0

Query: 246 QDHLSWKLEKSGIYSTKSMFQLLTRPS-PKVNQAT-SSLIWKHKSPKKVKVFLWSLAYRS 305
           +D LSWK  + G +S +S +++LT    P+ N A+  + +WK + P++VK FLW +  ++
Sbjct: 252 RDRLSWKFSQDGQFSVRSAYEMLTVDEVPRPNMASFFNCLWKVRVPERVKTFLWLVGNQA 311

Query: 306 LNTDEKLQKKFSNWSLLPSACRMCLKDAENLDHLFLHCEFASKAW 349
           + T+E+  ++  + S   + C++C    E++ H+   C      W
Sbjct: 312 VMTEEERHRRHLSAS---NVCQVCKGGVESMLHVLRDCPAQLGIW 353

BLAST of Spg032706 vs. ExPASy TrEMBL
Match: M5VH03 (zf-RVT domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa019714mg PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 3.1e-34
Identity = 111/347 (31.99%), Postives = 152/347 (43.80%), Query Frame = 0

Query: 19  LRACNKALLVKWLRRFSTDSNTLWHRIIVRKYGSHPLEWVSGGI-KGTSRNPWKEISLEL 78
           LR  N+AL  KWL RF  ++N+LWHRII  KYG     W +  I K + RNPW+EIS   
Sbjct: 71  LRERNEALRAKWLWRFPLETNSLWHRIIKSKYGIDSNGWDTKQIDKVSCRNPWREISKGY 130

Query: 79  PSMTAFISHSLGNREETYFLEDRWVGDRPLCAAFPRLYHLSLMKNHSVAEVLNLFGGTPY 138
            S       S+GN E+  F ED W+ +  L   FPRL  LS  KN S+A           
Sbjct: 131 NSFLQCCRFSVGNGEKIRFWEDLWLKEGILKDLFPRLSSLSRRKNQSIA----------- 190

Query: 139 SFGCETMDILALLSLIGEVTFRLDRRDCCRSFFHCLLNPTEESIFSLIWKDADLDRLVLF 198
                                             C  N     +  L W   D D     
Sbjct: 191 ----------------------------------CFAN---NHVMPLNW---DFD----- 250

Query: 199 VSFAGWQGKTLITCYGDAILLGRGLFEREIPSWLALLDKIKDVRLLDEQ-DHLSWKLEKS 258
                                 R L E EI   + LLD + +VRL   + D  SW++E+ 
Sbjct: 251 --------------------FRRNLSEAEIAEVVILLDILGNVRLYGSRPDQRSWEVEEQ 310

Query: 259 GIYSTKSMFQLLTRPSPKVNQATSSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSN 318
           G +S KS    L   +  V    SS IWK K+P K++ F+W  A   +NT + +Q++   
Sbjct: 311 GSFSCKSFRSFLLSTTRDVFPPFSS-IWKAKTPPKIQFFVWLAANGRINTCDCIQRRQPK 340

Query: 319 WSLLPSACRMCLKDAENLDHLFLHCEFASKAWCFVAKLLGISFCAPK 364
             L PS C +C ++AEN+DHLF+HC ++ K W  +   LG+ +  PK
Sbjct: 371 MCLSPSWCVLCKENAENIDHLFIHCSYSLKLWWRMLGALGVEWVIPK 340

BLAST of Spg032706 vs. ExPASy TrEMBL
Match: M5X4S0 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa021750mg PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 4.0e-34
Identity = 111/347 (31.99%), Postives = 152/347 (43.80%), Query Frame = 0

Query: 19  LRACNKALLVKWLRRFSTDSNTLWHRIIVRKYGSHPLEWVSGGI-KGTSRNPWKEISLEL 78
           LR  N+AL  KWL RF  ++N+LWHRII  KYG     W +  I K + RNPW+EIS   
Sbjct: 597 LRERNEALRAKWLWRFPLETNSLWHRIIKSKYGIDSNGWDTKRIDKVSCRNPWREISKGY 656

Query: 79  PSMTAFISHSLGNREETYFLEDRWVGDRPLCAAFPRLYHLSLMKNHSVAEVLNLFGGTPY 138
            S       S+GN E+  F ED W+ +  L   FPRL  LS  KN S+A           
Sbjct: 657 NSFLQCCRFSVGNGEKIRFWEDLWLKEGILKDLFPRLSSLSRRKNQSIA----------- 716

Query: 139 SFGCETMDILALLSLIGEVTFRLDRRDCCRSFFHCLLNPTEESIFSLIWKDADLDRLVLF 198
                                             C  N     +  L W   D D     
Sbjct: 717 ----------------------------------CFAN---NHVLPLNW---DFD----- 776

Query: 199 VSFAGWQGKTLITCYGDAILLGRGLFEREIPSWLALLDKIKDVRLLDEQ-DHLSWKLEKS 258
                                 R L E EI   + LLD + +VRL   + D  SW++E+ 
Sbjct: 777 --------------------FRRNLSEAEIAEVVILLDILGNVRLYGSRPDRRSWEVEEQ 836

Query: 259 GIYSTKSMFQLLTRPSPKVNQATSSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSN 318
           G +S KS    L   +  V    SS IWK K+P K++ F+W  A   +NT + +Q++   
Sbjct: 837 GSFSCKSFRSFLLSTTRDVFPPFSS-IWKAKTPPKIQFFVWLAANGRINTCDCIQRRQPK 866

Query: 319 WSLLPSACRMCLKDAENLDHLFLHCEFASKAWCFVAKLLGISFCAPK 364
             L PS C +C ++AEN+DHLFLHC ++ + W  +   LG+ +  PK
Sbjct: 897 MCLSPSWCVLCKENAENIDHLFLHCSYSLRLWWKMLGALGVEWVIPK 866

BLAST of Spg032706 vs. ExPASy TrEMBL
Match: M5XV38 (zf-RVT domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_ppa019854mg PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 6.9e-34
Identity = 110/347 (31.70%), Postives = 152/347 (43.80%), Query Frame = 0

Query: 19  LRACNKALLVKWLRRFSTDSNTLWHRIIVRKYGSHPLEWVSGGI-KGTSRNPWKEISLEL 78
           LR  N+AL  KWL RF  ++N+LWHRII  KYG     W +  I K + RNPW+EIS   
Sbjct: 111 LRERNEALRAKWLWRFPLETNSLWHRIIKSKYGIDSNGWDTKRIDKVSCRNPWREISKGY 170

Query: 79  PSMTAFISHSLGNREETYFLEDRWVGDRPLCAAFPRLYHLSLMKNHSVAEVLNLFGGTPY 138
            S       S+GN E+  F ED W+ +  L   FPRL  LS  KN S+A           
Sbjct: 171 NSFLQCCRFSVGNGEKIRFWEDLWLKEGILKDLFPRLSSLSRRKNQSIA----------- 230

Query: 139 SFGCETMDILALLSLIGEVTFRLDRRDCCRSFFHCLLNPTEESIFSLIWKDADLDRLVLF 198
                                             C  N     +  L W   D D     
Sbjct: 231 ----------------------------------CFAN---NHVLPLNW---DFD----- 290

Query: 199 VSFAGWQGKTLITCYGDAILLGRGLFEREIPSWLALLDKIKDVRLLDEQ-DHLSWKLEKS 258
                                 R L E EI   + LLD + +VRL   + D  SW++E+ 
Sbjct: 291 --------------------FRRNLSEAEIAEVVILLDILGNVRLYGSRPDRRSWEVEEQ 350

Query: 259 GIYSTKSMFQLLTRPSPKVNQATSSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSN 318
           G +S KS    L   +  V    SS IWK K+P K++ F+W  A   +NT + +Q++   
Sbjct: 351 GSFSCKSFRSFLLSTTRDVFPPFSS-IWKAKTPPKIQFFVWLAANGRINTCDCIQRRQPK 380

Query: 319 WSLLPSACRMCLKDAENLDHLFLHCEFASKAWCFVAKLLGISFCAPK 364
             L PS C +C ++AEN+DHLF+HC ++ + W  +   LG+ +  PK
Sbjct: 411 MCLSPSWCVLCKENAENIDHLFIHCSYSLRLWWKMLGALGVEWVIPK 380

BLAST of Spg032706 vs. ExPASy TrEMBL
Match: M5WKV4 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa015607mg PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 4.5e-33
Identity = 109/347 (31.41%), Postives = 151/347 (43.52%), Query Frame = 0

Query: 19  LRACNKALLVKWLRRFSTDSNTLWHRIIVRKYGSHPLEWVSGGI-KGTSRNPWKEISLEL 78
           LR  N+AL  KWL RF  + N+LWHRII  KYG     W +  I K + RNPW+EIS   
Sbjct: 604 LRERNEALRAKWLWRFPLEPNSLWHRIIKSKYGIDSNGWDTKQIDKVSCRNPWREISKGY 663

Query: 79  PSMTAFISHSLGNREETYFLEDRWVGDRPLCAAFPRLYHLSLMKNHSVAEVLNLFGGTPY 138
            S       S+GN E+  F ED W+ +  L   FPRL  LS  KN S+A           
Sbjct: 664 NSFLQCCRFSVGNGEKIRFWEDFWLKEGILKDLFPRLSSLSRRKNQSIA----------- 723

Query: 139 SFGCETMDILALLSLIGEVTFRLDRRDCCRSFFHCLLNPTEESIFSLIWKDADLDRLVLF 198
                                             C  N     +  L W   D D     
Sbjct: 724 ----------------------------------CFAN---NHVMPLNW---DFD----- 783

Query: 199 VSFAGWQGKTLITCYGDAILLGRGLFEREIPSWLALLDKIKDVRLLDEQ-DHLSWKLEKS 258
                                 R L E EI   + LLD + +VRL   + D  SW++++ 
Sbjct: 784 --------------------FRRNLSEAEIAEVVILLDILGNVRLYGSRPDRRSWEVKEQ 843

Query: 259 GIYSTKSMFQLLTRPSPKVNQATSSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSN 318
           G +S KS    L   +  V    SS IWK K+P K++ F+W  A   +NT + +Q++   
Sbjct: 844 GSFSCKSFRSFLLSTTRDVFPPFSS-IWKAKTPPKIQFFVWLAANGRINTCDCIQRRQPK 873

Query: 319 WSLLPSACRMCLKDAENLDHLFLHCEFASKAWCFVAKLLGISFCAPK 364
             L PS C +C ++AEN+DHLF+HC ++ + W  +   LG+ +  PK
Sbjct: 904 MCLSPSWCVLCKENAENIDHLFIHCSYSLRLWWRMLGALGVEWVIPK 873

BLAST of Spg032706 vs. ExPASy TrEMBL
Match: A0A5H2XQW2 (TatD related DNase OS=Prunus dulcis OX=3755 GN=Prudu_862S001100 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 9.9e-33
Identity = 109/347 (31.41%), Postives = 147/347 (42.36%), Query Frame = 0

Query: 19  LRACNKALLVKWLRRFSTDSNTLWHRIIVRKYGSHPLEWVSGGI-KGTSRNPWKEISLEL 78
           LR  N+AL  KWL RF  ++N+LWHRII  KYG     W +  I K + RNPW+EIS   
Sbjct: 617 LRERNEALRAKWLWRFPLETNSLWHRIIKSKYGLDSNGWDTKQIDKVSCRNPWREISKGY 676

Query: 79  PSMTAFISHSLGNREETYFLEDRWVGDRPLCAAFPRLYHLSLMKNHSVAEVLNLFGGTPY 138
            S       S+GN E+  F ED W+ +  L   FPRLY LS  KN  +A   N       
Sbjct: 677 ISFLQCCRFSVGNGEKIRFWEDFWLKEGILKDLFPRLYSLSRRKNQCIAWFAN------- 736

Query: 139 SFGCETMDILALLSLIGEVTFRLDRRDCCRSFFHCLLNPTEESIFSLIWKDADLDRLVLF 198
                                                         L W   D D     
Sbjct: 737 -----------------------------------------NHEMPLNW---DFD----- 796

Query: 199 VSFAGWQGKTLITCYGDAILLGRGLFEREIPSWLALLDKIKDVRLLDEQ-DHLSWKLEKS 258
                                 R L E EI   + LLD + +VRL   + D  SW++E+ 
Sbjct: 797 --------------------FRRNLSEAEIAEVVLLLDILGNVRLFGSRPDRRSWEIEEQ 856

Query: 259 GIYSTKSMFQLLTRPSPKVNQATSSLIWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSN 318
           G +S KS    L   +  V     S IWK K+P K++ F+W  A   +NT + +Q++   
Sbjct: 857 GSFSCKSFRSFLISTTSVVFPPYRS-IWKAKTPPKIQFFVWLAANGRINTCDCIQRRQPK 886

Query: 319 WSLLPSACRMCLKDAENLDHLFLHCEFASKAWCFVAKLLGISFCAPK 364
             L PS C  C ++AEN+DHLF+HC ++ K W  +   LG  +  PK
Sbjct: 917 MCLSPSWCVFCKENAENIDHLFIHCSYSLKLWWRMLDALGAEWVIPK 886

BLAST of Spg032706 vs. TAIR 10
Match: AT3G25270.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 45.8 bits (107), Expect = 8.6e-05
Identity = 22/66 (33.33%), Postives = 33/66 (50.00%), Query Frame = 0

Query: 283 IWKHKSPKKVKVFLWSLAYRSLNTDEKLQKKFSNWSLLPSACRMCLKDAENLDHLFLHCE 342
           IWK K+  K+K FLW L   +L T + L+++          C  C ++ E   HLF  C 
Sbjct: 18  IWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIR---NHPQCHRCCQEDETSQHLFFDCF 77

Query: 343 FASKAW 349
           +A + W
Sbjct: 78  YAQQVW 80

BLAST of Spg032706 vs. TAIR 10
Match: AT1G33710.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 43.1 bits (100), Expect = 5.6e-04
Identity = 35/111 (31.53%), Postives = 50/111 (45.05%), Query Frame = 0

Query: 242 LLDEQDHLSWKLEK---SGIYSTKSMFQLLTRPSPKVNQATSSLIWKHKSPKKVKVFLWS 301
           L  E D   W +E    +G  S K+   L  RP   V     ++ +K  +PK     +W 
Sbjct: 11  LSGELDVYDWVVEDKLCNGFSSAKTWAAL--RPRSDVVSWAKTVWFKGATPKHA-FHMWV 70

Query: 302 LAYRSLNTDEKLQKKFSNWSL-LPSACRMCLKDAENLDHLFLHCEFASKAW 349
                L T  +L    ++W + L + C +C  D E+ DHLFL CEFA   W
Sbjct: 71  TNLDRLPTKTRL----ASWGMQLQTTCGLCSLDIEDRDHLFLTCEFACFLW 114

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
VVA30963.12.0e-3231.49Hypothetical predicted protein, partial [Prunus dulcis][more]
BBN69274.12.0e-3231.41TatD related DNase [Prunus dulcis][more]
RVW91473.12.7e-3227.75hypothetical protein CK203_038540 [Vitis vinifera][more]
CAN75609.12.7e-3227.38hypothetical protein VITISV_002943 [Vitis vinifera][more]
CAN75156.14.6e-3227.38hypothetical protein VITISV_042643 [Vitis vinifera][more]
Match NameE-valueIdentityDescription
P0C2F62.4e-0728.57Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... [more]
Match NameE-valueIdentityDescription
M5VH033.1e-3431.99zf-RVT domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_p... [more]
M5X4S04.0e-3431.99Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=... [more]
M5XV386.9e-3431.70zf-RVT domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_ppa019854mg ... [more]
M5WKV44.5e-3331.41Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=... [more]
A0A5H2XQW29.9e-3331.41TatD related DNase OS=Prunus dulcis OX=3755 GN=Prudu_862S001100 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G25270.18.6e-0533.33Ribonuclease H-like superfamily protein [more]
AT1G33710.15.6e-0431.53RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 259..348
e-value: 7.0E-18
score: 65.1
NoneNo IPR availablePANTHERPTHR36617PROTEIN, PUTATIVE-RELATEDcoord: 81..132

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg032706.1Spg032706.1mRNA