Spg032700 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCCCAGTAAGTTGTTACTATTAAATTGGTTGCTAGTAACTCTCTTTCATTCGGTCGGTTGGATCCTTGTTAATGAGATAGGTTGTTATTTGCTTTCTTTTGTTAAGGATTGGAGATGTTGTTTTCCTCCTTGGTTTAGTTGTTTTATTGATTTTGGTGAGTTGAAACTTAGAAGTTATAATATAATGGAAAATTTTAGTTTACTTTCTTTTCTTGAGTAACGAGTAGAACTTATTGCTTTACTTGAGTTAGATCAAATGAGAAGTCTTAGTAATGTTTCCAATGTTTAGTTGAAAATTTGGGATCGTTACACTTAAACTCCTTCCATTTCTCTATTTCTGTATTCAACGAAAAGTTTTGTTTCTTGTTTCAAAATATTGCAGACCCCTCCCCCCTTCCCCATCACCTACAGAGCACCATTTGACACAAAGATGTCTCGAAGATCGTCTAGGTTAGTGGAAAAAGCTAAGGAATATTTAGAGAAAACCAGAATTAGTGAAATTGCAAAACCATCCAGAATGAAGAGATGTGGTGTATCGGGGGGAAACCATAAATCTTCTAGACGAAGTCAGAAGTTGAAGCAGAATAATGAGATGAAGTTGAATGAAGTTCTGTTCGAGCAATTAGAAGGGAAGAAGAGAAAGACTTGTAGTAAGAGTTCAGTGGTCACAAGAGCAGCTGCTTCAAAGAATTTCGGGTTTGAAGGGATCAAAAAAGGGGGTGGGAGATCAATGAAGAGGGTGTATTATCAAAAAGTGGTTTTTGATGGAGGTGAATTTGAGGTTGGTGACGATGTCTATGTGAAGAGGAGAGAAGATGCAAGCTCTGACGACGAAGATCGTGAAGTTGAGGAGTGCAAAGTGTGCTTTAAGTCTGGAGAGGCTATAATGATTGAGTGTGATGATTGTCTTGGTGGTTTTCATTTGGATTGTTTGAAGCCGCCTATGAAGGAGGTCCCTGAGGGAGATTGGATTTGTGGGTTTTGTGAAGCTACTAAAATGGGCAAAGAGGTTCAGTTGCCAAATCCTCCAGAAGGTAAAAAACGGGTTAGGACAATGAGGGAGAAGCTTCTGGCGGGTGACTTGTGGGCTGCTCACATTGAAAGGTGGAATTTTACTTATTTATTCTGTTTTGAATTTTGAATGTTTATAAATGTGAGCCTGGTTTTCATGTATACGATTTGTTTACTAGACTATTGGAAATGTGCAGATTATGGAAAGAAGCAAATGGTATCTATCAGTGTAAGGTTAGATGGTATATAATCCCAGAAGAGACAACAATGGGAAGGCAATCACATAACTTGAAGAGAGAGCTTTATCTAACTAATGACTATGCAGATATTGAGGTAATTAACTGTTTTTTACTTATGGTAGCTATTATCTCCTCAGTTTAGTGAACCTAGTTGAATTCATTCCTACAAATGCGAGATACTTTTCTTTTTCTTTTTTTTCCCCTTTCGTCATCTATATTTTCCTTTCTATTTGCTAGTTTGTCTAGTTGAAAGTCCATGTATGCAATCAAAAGTCCATGGAATTTATATGCAATTATGCACAAAATGTTCTGAATTTTTAAAGAGCAAGGTTAAATGTGAATGAAACTAGTCATATTATTCTAGAAAGTCAAGCTAGCTTAAGAAGCACGAACACTTTAGTTTGGCTAGCGTGTTCGTGTCCGACACGTGTCAGATTCTTGGACACTCCGACACTTGTTGGACATGTATCAGACACTTGTTAGCACAATTGATATGTGACAAACACTAATTGTAGGTACATTTCGAACCCTTGTTAAGTATACTAAATAGACCATGCTTAAATGCCAAAAATGATAAATTTTAAGAGTAAAACACATTAAATTCATTTTTTCAGGCATATAAATGCATAAATTTATTGATTTTTTAATTTCCTTCTTGTATAATAACGATATATATTTTAAAAAAGGTATATTTTTCTAAACATGTTCACATTGTGTCCGTGTCCTAGATTAATAAAAAATGACGTGTCACCGTGTCTGTGTCGTATCTGTATTTGTGCTTCTTAGAAGCCAACTAAACTTGTTTGTTCATGCTCATAATTTTTTGCCAAGCTAGGATAGACTAATTTTCATCTTGATCTTAGCTTTACATAAAAGGAGAACATGTCTTCATTCTACCTAGCCCCGAGGACATCCCTATAGTTTTTAAGTGCAATCCATATTTTTATAGAAACAAGCAGCAAGGCTCCTGGAATGATGTAGTTTCTCTTATGTTTTCTTTTAACTGTTGTAATTACTTTGTTTCTTTTTTTACTGTTAATTTGTTGATAGAGTTGCTTTCAAAGAGTTAGGGAGATGTGAACCAAAACATTCAATTCAATAAAAGAGAATTCTTAAATGCAATTTGGTATTAGAGCACCCTCAACGAAGGGACTTGATGGTGGGGCAGAAGAACCCTGTGACCTTTGATGAGGACAAAGCTCAACCTAGAGTGGATGGCTTGAGCTTCTCTCCAAAAATCCTCAACCAACGCATCTTGCCCAGGGAAGAATCCATGAATGAGATGGAAATTCATTTCATGAGGTGTGATGAGAAGTTTGGCATGACAAATGGAACAATTAACGCTCCAAAGACCTACCAGGATTAA ATGTCTCGAAGATCGTCTAGGTTAGTGGAAAAAGCTAAGGAATATTTAGAGAAAACCAGAATTAGTGAAATTGCAAAACCATCCAGAATGAAGAGATGTGGTGTATCGGGGGGAAACCATAAATCTTCTAGACGAAGTCAGAAGTTGAAGCAGAATAATGAGATGAAGTTGAATGAAGTTCTGTTCGAGCAATTAGAAGGGAAGAAGAGAAAGACTTGTAGTAAGAGTTCAGTGGTCACAAGAGCAGCTGCTTCAAAGAATTTCGGGTTTGAAGGGATCAAAAAAGGGGGTGGGAGATCAATGAAGAGGGTGTATTATCAAAAAGTGGTTTTTGATGGAGGTGAATTTGAGGTTGGTGACGATGTCTATGTGAAGAGGAGAGAAGATGCAAGCTCTGACGACGAAGATCGTGAAGTTGAGGAGTGCAAAGTGTGCTTTAAGTCTGGAGAGGCTATAATGATTGAGTGTGATGATTGTCTTGGTGGTTTTCATTTGGATTGTTTGAAGCCGCCTATGAAGGAGGTCCCTGAGGGAGATTGGATTTGTGGGTTTTGTGAAGCTACTAAAATGGGCAAAGAGGTTCAGTTGCCAAATCCTCCAGAAGGTAAAAAACGGGTTAGGACAATGAGGGAGAAGCTTCTGGCGGGTGACTTGTGGGCTGCTCACATTGAAAGATTATGGAAAGAAGCAAATGGTATCTATCAGTGTAAGGTTAGATGGTATATAATCCCAGAAGAGACAACAATGGGAAGGCAATCACATAACTTGAAGAGAGAGCTTTATCTAACTAATGACTATGCAGATATTGAGCACCCTCAACGAAGGGACTTGATGGTGGGGCAGAAGAACCCTGTGACCTTTGATGAGGACAAAGCTCAACCTAGAGTGGATGGCTTGAGCTTCTCTCCAAAAATCCTCAACCAACGCATCTTGCCCAGGGAAGAATCCATGAATGAGATGGAAATTCATTTCATGAGGTGTGATGAGAAGTTTGGCATGACAAATGGAACAATTAACGCTCCAAAGACCTACCAGGATTAA ATGTCTCGAAGATCGTCTAGGTTAGTGGAAAAAGCTAAGGAATATTTAGAGAAAACCAGAATTAGTGAAATTGCAAAACCATCCAGAATGAAGAGATGTGGTGTATCGGGGGGAAACCATAAATCTTCTAGACGAAGTCAGAAGTTGAAGCAGAATAATGAGATGAAGTTGAATGAAGTTCTGTTCGAGCAATTAGAAGGGAAGAAGAGAAAGACTTGTAGTAAGAGTTCAGTGGTCACAAGAGCAGCTGCTTCAAAGAATTTCGGGTTTGAAGGGATCAAAAAAGGGGGTGGGAGATCAATGAAGAGGGTGTATTATCAAAAAGTGGTTTTTGATGGAGGTGAATTTGAGGTTGGTGACGATGTCTATGTGAAGAGGAGAGAAGATGCAAGCTCTGACGACGAAGATCGTGAAGTTGAGGAGTGCAAAGTGTGCTTTAAGTCTGGAGAGGCTATAATGATTGAGTGTGATGATTGTCTTGGTGGTTTTCATTTGGATTGTTTGAAGCCGCCTATGAAGGAGGTCCCTGAGGGAGATTGGATTTGTGGGTTTTGTGAAGCTACTAAAATGGGCAAAGAGGTTCAGTTGCCAAATCCTCCAGAAGGTAAAAAACGGGTTAGGACAATGAGGGAGAAGCTTCTGGCGGGTGACTTGTGGGCTGCTCACATTGAAAGATTATGGAAAGAAGCAAATGGTATCTATCAGTGTAAGGTTAGATGGTATATAATCCCAGAAGAGACAACAATGGGAAGGCAATCACATAACTTGAAGAGAGAGCTTTATCTAACTAATGACTATGCAGATATTGAGCACCCTCAACGAAGGGACTTGATGGTGGGGCAGAAGAACCCTGTGACCTTTGATGAGGACAAAGCTCAACCTAGAGTGGATGGCTTGAGCTTCTCTCCAAAAATCCTCAACCAACGCATCTTGCCCAGGGAAGAATCCATGAATGAGATGGAAATTCATTTCATGAGGTGTGATGAGAAGTTTGGCATGACAAATGGAACAATTAACGCTCCAAAGACCTACCAGGATTAA MSRRSSRLVEKAKEYLEKTRISEIAKPSRMKRCGVSGGNHKSSRRSQKLKQNNEMKLNEVLFEQLEGKKRKTCSKSSVVTRAAASKNFGFEGIKKGGGRSMKRVYYQKVVFDGGEFEVGDDVYVKRREDASSDDEDREVEECKVCFKSGEAIMIECDDCLGGFHLDCLKPPMKEVPEGDWICGFCEATKMGKEVQLPNPPEGKKRVRTMREKLLAGDLWAAHIERLWKEANGIYQCKVRWYIIPEETTMGRQSHNLKRELYLTNDYADIEHPQRRDLMVGQKNPVTFDEDKAQPRVDGLSFSPKILNQRILPREESMNEMEIHFMRCDEKFGMTNGTINAPKTYQD Homology
BLAST of Spg032700 vs. NCBI nr
Match: XP_022973940.1 (origin of replication complex subunit 1B-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 438.3 bits (1126), Expect = 6.0e-119 Identity = 231/317 (72.87%), Postives = 248/317 (78.23%), Query Frame = 0
BLAST of Spg032700 vs. NCBI nr
Match: XP_022925406.1 (origin of replication complex subunit 1B-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 437.6 bits (1124), Expect = 1.0e-118 Identity = 231/317 (72.87%), Postives = 249/317 (78.55%), Query Frame = 0
BLAST of Spg032700 vs. NCBI nr
Match: XP_022973939.1 (origin of replication complex subunit 1B-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 437.2 bits (1123), Expect = 1.3e-118 Identity = 221/275 (80.36%), Postives = 235/275 (85.45%), Query Frame = 0
BLAST of Spg032700 vs. NCBI nr
Match: KAG7025212.1 (Origin of replication complex subunit 1A [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 436.4 bits (1121), Expect = 2.3e-118 Identity = 221/275 (80.36%), Postives = 236/275 (85.82%), Query Frame = 0
BLAST of Spg032700 vs. NCBI nr
Match: XP_022925405.1 (origin of replication complex subunit 1B-like isoform X1 [Cucurbita moschata] >KAG6592402.1 Origin of replication complex subunit 1A, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 436.4 bits (1121), Expect = 2.3e-118 Identity = 221/275 (80.36%), Postives = 236/275 (85.82%), Query Frame = 0
BLAST of Spg032700 vs. ExPASy Swiss-Prot
Match: Q9SU24 (Origin of replication complex subunit 1B OS=Arabidopsis thaliana OX=3702 GN=ORC1B PE=1 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 8.2e-71 Identity = 132/209 (63.16%), Postives = 155/209 (74.16%), Query Frame = 0
BLAST of Spg032700 vs. ExPASy Swiss-Prot
Match: Q710E8 (Origin of replication complex subunit 1A OS=Arabidopsis thaliana OX=3702 GN=ORC1A PE=1 SV=1) HSP 1 Score: 258.8 bits (660), Expect = 8.5e-68 Identity = 122/178 (68.54%), Postives = 143/178 (80.34%), Query Frame = 0
BLAST of Spg032700 vs. ExPASy Swiss-Prot
Match: Q5SMU7 (Origin of replication complex subunit 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ORC1 PE=2 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 1.1e-67 Identity = 125/232 (53.88%), Postives = 160/232 (68.97%), Query Frame = 0
BLAST of Spg032700 vs. ExPASy Swiss-Prot
Match: Q6ZPK0 (PHD finger protein 21A OS=Mus musculus OX=10090 GN=Phf21a PE=1 SV=3) HSP 1 Score: 69.7 bits (169), Expect = 7.3e-11 Identity = 31/69 (44.93%), Postives = 43/69 (62.32%), Query Frame = 0
BLAST of Spg032700 vs. ExPASy Swiss-Prot
Match: Q96BD5 (PHD finger protein 21A OS=Homo sapiens OX=9606 GN=PHF21A PE=1 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.2e-10 Identity = 31/69 (44.93%), Postives = 42/69 (60.87%), Query Frame = 0
BLAST of Spg032700 vs. ExPASy TrEMBL
Match: A0A6J1ICM7 (Origin recognition complex subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC111472568 PE=3 SV=1) HSP 1 Score: 438.3 bits (1126), Expect = 2.9e-119 Identity = 231/317 (72.87%), Postives = 248/317 (78.23%), Query Frame = 0
BLAST of Spg032700 vs. ExPASy TrEMBL
Match: A0A6J1EC47 (Origin recognition complex subunit 1 OS=Cucurbita moschata OX=3662 GN=LOC111432707 PE=3 SV=1) HSP 1 Score: 437.6 bits (1124), Expect = 4.9e-119 Identity = 231/317 (72.87%), Postives = 249/317 (78.55%), Query Frame = 0
BLAST of Spg032700 vs. ExPASy TrEMBL
Match: A0A6J1IG29 (Origin recognition complex subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC111472568 PE=3 SV=1) HSP 1 Score: 437.2 bits (1123), Expect = 6.4e-119 Identity = 221/275 (80.36%), Postives = 235/275 (85.45%), Query Frame = 0
BLAST of Spg032700 vs. ExPASy TrEMBL
Match: A0A6J1EHV7 (Origin recognition complex subunit 1 OS=Cucurbita moschata OX=3662 GN=LOC111432707 PE=3 SV=1) HSP 1 Score: 436.4 bits (1121), Expect = 1.1e-118 Identity = 221/275 (80.36%), Postives = 236/275 (85.82%), Query Frame = 0
BLAST of Spg032700 vs. ExPASy TrEMBL
Match: A0A6J1DLH3 (Origin recognition complex subunit 1 OS=Momordica charantia OX=3673 GN=LOC111021645 PE=3 SV=1) HSP 1 Score: 434.5 bits (1116), Expect = 4.2e-118 Identity = 216/272 (79.41%), Postives = 237/272 (87.13%), Query Frame = 0
BLAST of Spg032700 vs. TAIR 10
Match: AT4G12620.1 (origin of replication complex 1B ) HSP 1 Score: 268.9 bits (686), Expect = 5.8e-72 Identity = 132/209 (63.16%), Postives = 155/209 (74.16%), Query Frame = 0
BLAST of Spg032700 vs. TAIR 10
Match: AT4G14700.1 (origin recognition complex 1 ) HSP 1 Score: 258.8 bits (660), Expect = 6.0e-69 Identity = 122/178 (68.54%), Postives = 143/178 (80.34%), Query Frame = 0
BLAST of Spg032700 vs. TAIR 10
Match: AT3G01460.1 (methyl-CPG-binding domain 9 ) HSP 1 Score: 55.1 bits (131), Expect = 1.3e-07 Identity = 33/107 (30.84%), Postives = 50/107 (46.73%), Query Frame = 0
BLAST of Spg032700 vs. TAIR 10
Match: AT5G44800.1 (chromatin remodeling 4 ) HSP 1 Score: 51.2 bits (121), Expect = 1.9e-06 Identity = 27/91 (29.67%), Postives = 39/91 (42.86%), Query Frame = 0
BLAST of Spg032700 vs. TAIR 10
Match: AT1G79350.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 47.8 bits (112), Expect = 2.1e-05 Identity = 20/56 (35.71%), Postives = 32/56 (57.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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