Spg032604 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg032604
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Transposon TX1 uncharacterized 149 kDa protein
Location	scaffold11: 6386486 .. 6388851 (+)
RNA-Seq Expression	Spg032604
Synteny	Spg032604

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGGGTGAACCAAAAGTTCCATCTTATGGGGGATGGATCAAAGTCAGAAACCTCCCCCTGGATAAATGGTCCATTAGTACATTTAAGAAAATCGGAGATGAATGTGGAGGATATTTGGAAACTGGCAACAAAACTCTCTCTCGTATGGACATGATGGAGATAGGCATCAAGGTTAGAGAGAATGACACAGGGTTCATCCCAGCAGAAGTGCATCTCCCATCGTCTTCTTGCAATCCCACCGTGGTTAAAATCGATCCCTTTTATGTTGAAGATTACAGTATAGGCTACATTGCCGGCGTCCATGGCCGAATACCAAAGCCACCGATGGAATTCCATAACCCACGCGCCAATCATGAACATGAAGGAGAACAAAAAGGAAAAAGGGATAGTCCACGCGCCGCCGTCCTAGGTATAAAGGATAATGTGCAGGAAAAATCCCTGAGCTCGTACAGATATGAAGTCCAAAGCGCCCCTATTGATGATCTGTTCACCACAACCTCTCTATCCTCAGCCGTAATACCAGACATGGGCCCACTCATATCTCCTCCTTCCAATGAACCCCCACCAATCCCCAAAATCCACTCCCATAAGCCAAGATGGGCCCCACCCCCTATTAACACCAATATAGCTTTGTCCATTGACCAAAGTCTGACAACCATACCCCAATCTCGACCAATTTCTCCCACCCAACACCATCCCCAAAGCCTTCCTCGAAAAAGCCCAACCGTCCATCATAGCAGGAAAAAGCTCATCCTCATCAATAACAAAGAAACCTATCTTATTACGGGAACCAAGCATTCGACCAACACTGACCTCCCCTTATCAGATTCGGAAGGAGCATGGTCGTCTCCCTGTTCAGAATCCAGGGAAGAAACCCCTTTGCCAACTCCCTAGAAGGCTATTATGCAAGCGGTTTCCCCCCCAACCATTCGCAATCTTTTCGAACCACAGATTGATCACCAACCTCTCATTGAAGATCCAACTCCCTTGCGAGTTGAAGAACCAGACTCCCAGAGCTTGCATCAAAACAGAGACCTGATGGCAACAACCCTCATTGATATTGAGGTGGAAGATACAGAAACAGAGGAATTGGAAACAGAGGGCATCAGAATTGATCCAGCCGTTTACCTTCTCTACCTCTTTCCATGGTTAACCGAACATGGAATGTGCATTATGCCAATGCCCAGCAGACGCAAAACCTCAGCCTCCACAAAGAAAAAAGTCATGTGGGTCAAGGAACTCCAGAATCTCCATTCCACAGTTAATTATGAGAAGAATCCATCGGGCCAACTTATGGCAGGGTCGCAAGTAGCCACATGATTTTTATCTCTTGGAATATTCGGGGACTTGGTTCATGGAAAAAAAGAGCTCTTATCAAGGAATTCCTCAACTCTCAGAACCCCTCTTTGGTGATCATTCAGGAAACCAAGATGACCAACATTGATAGGAAAATCATCAAATCTATTTGGAGCTCTAGAAACATTGCTTGGGCCTCCATTAATGTTGTGGGCGCTTCTGGTGGGATTGTCATCATCTAGAATGAATCCTCCTTCTCTGTTTTGGAGGTTATTGAAGGTACTTTCTCCCTATCCATCAATCTTTCTCTTGTTGATGGCTTCACATTCTGGATTATAGGGGTTTATGGCCCAAACTCCTCTCGAGAGAGGAAGCTCTTTTGGAGAGAACTAGCTGATCTCAAAGGCCTATGTCTGCCTAATTGGGTTTTGGGAGGAGATTTCAATGTCATTAGATGGAGCTGGGAGAAATCAACAATATTAACCCCGTCTCGAGCTATGAGGAAATTCAACCGTTTTATTGATCTAGCTGCCCTTCAAGACATCCCTCTCTCTAATGGCAAGTTCACTTGGTCTAGTTTCAGGCCAAATCCCACCATGACTCTCATTGACAGGTTCCTTCTATCCGACCATATTCCCATCAAATTCGGTTCAGCTTATGCTCGCAGACTAGAAAGAGTCACCTCCGATCATTATCCAATCTGCTTGTTTCTCGGTAATGACCGTTGGGGCTCGACTCCTTTCAGATTCATTAATGTCTGGCTTTCTCACCACTTCTTCCTTCGCACGGTCGAATCATGGTGGAAGACCTCCACCTCTCATGGATGGCCCGACCACGGGTTCATTCAAAAGCTTAAGGGGCTGAAGATGGAGTTGAAACACTGGAACCAATCTGTCTTTGGTAATCAAAAAGAACAAAAGGCCAAGCTTAGCCAAGAACTCGCGACTATTGATACAAAAGAAGATAGTGGCCATCTATCTGATCAAGATTATATCAGAAAAACTGAGATCAAGGCTGAATTGATGATGTTTTCGGCCAAAGAAGAAATTATGTGGAGGAAAAAATGA

mRNA sequence

ATGCTGGGTGAACCAAAAGTTCCATCTTATGGGGGATGGATCAAAGTCAGAAACCTCCCCCTGGATAAATGGTCCATTAGTACATTTAAGAAAATCGGAGATGAATGTGGAGGATATTTGGAAACTGGCAACAAAACTCTCTCTCGTATGGACATGATGGAGATAGGCATCAAGGTTAGAGAGAATGACACAGGGTTCATCCCAGCAGAAGTGCATCTCCCATCGTCTTCTTGCAATCCCACCGTGGTTAAAATCGATCCCTTTTATGTTGAAGATTACAGTATAGGCTACATTGCCGGCGTCCATGGCCGAATACCAAAGCCACCGATGGAATTCCATAACCCACGCGCCAATCATGAACATGAAGGAGAACAAAAAGGAAAAAGGGATAGTCCACGCGCCGCCGTCCTAGGTATAAAGGATAATGTGCAGGAAAAATCCCTGAGCTCGTACAGATATGAAGTCCAAAGCGCCCCTATTGATGATCTGTTCACCACAACCTCTCTATCCTCAGCCATTGATCACCAACCTCTCATTGAAGATCCAACTCCCTTGCGAGTTGAAGAACCAGACTCCCAGAGCTTGCATCAAAACAGAGACCTGATGGCAACAACCCTCATTGATATTGAGGTGGAAGATACAGAAACAGAGGAATTGGAAACAGAGGGCATCAGAATTGATCCAGCCGTTTACCTTCTCTACCTCTTTCCATGGTTAACCGAACATGGAATGTGCATTATGCCAATGCCCAGCAGACGCAAAACCTCAGCCTCCACAAAGAAAAAAGTCATGTGGGTCAAGGAACTCCAGAATCTCCATTCCACAGTTAATTATGAGAAGAATCCATCGGGCCAACTTATGGCAGGGTCGCAAAATGAATCCTCCTTCTCTGTTTTGGAGGTTATTGAAGCTGCCCTTCAAGACATCCCTCTCTCTAATGGCAAGTTCACTTGGTCTAGTTTCAGGCCAAATCCCACCATGACTCTCATTGACAGGTTCCTTCTATCCGACCATATTCCCATCAAATTCGGTTCAGCTTATGCTCGCAGACTAGAAAGAGTCACCTCCGATCATTATCCAATCTGCTTGTTTCTCGGTAATGACCGTTGGGGCTCGACTCCTTTCAGATTCATTAATGTCTGGCTTTCTCACCACTTCTTCCTTCGCACGGTCGAATCATGGTGGAAGACCTCCACCTCTCATGGATGGCCCGACCACGGGTTCATTCAAAAGCTTAAGGGGCTGAAGATGGAGTTGAAACACTGGAACCAATCTGTCTTTGGTAATCAAAAAGAACAAAAGGCCAAGCTTAGCCAAGAACTCGCGACTATTGATACAAAAGAAGATAGTGGCCATCTATCTGATCAAGATTATATCAGAAAAACTGAGATCAAGGCTGAATTGATGATGTTTTCGGCCAAAGAAGAAATTATGTGGAGGAAAAAATGA

Coding sequence (CDS)

ATGCTGGGTGAACCAAAAGTTCCATCTTATGGGGGATGGATCAAAGTCAGAAACCTCCCCCTGGATAAATGGTCCATTAGTACATTTAAGAAAATCGGAGATGAATGTGGAGGATATTTGGAAACTGGCAACAAAACTCTCTCTCGTATGGACATGATGGAGATAGGCATCAAGGTTAGAGAGAATGACACAGGGTTCATCCCAGCAGAAGTGCATCTCCCATCGTCTTCTTGCAATCCCACCGTGGTTAAAATCGATCCCTTTTATGTTGAAGATTACAGTATAGGCTACATTGCCGGCGTCCATGGCCGAATACCAAAGCCACCGATGGAATTCCATAACCCACGCGCCAATCATGAACATGAAGGAGAACAAAAAGGAAAAAGGGATAGTCCACGCGCCGCCGTCCTAGGTATAAAGGATAATGTGCAGGAAAAATCCCTGAGCTCGTACAGATATGAAGTCCAAAGCGCCCCTATTGATGATCTGTTCACCACAACCTCTCTATCCTCAGCCATTGATCACCAACCTCTCATTGAAGATCCAACTCCCTTGCGAGTTGAAGAACCAGACTCCCAGAGCTTGCATCAAAACAGAGACCTGATGGCAACAACCCTCATTGATATTGAGGTGGAAGATACAGAAACAGAGGAATTGGAAACAGAGGGCATCAGAATTGATCCAGCCGTTTACCTTCTCTACCTCTTTCCATGGTTAACCGAACATGGAATGTGCATTATGCCAATGCCCAGCAGACGCAAAACCTCAGCCTCCACAAAGAAAAAAGTCATGTGGGTCAAGGAACTCCAGAATCTCCATTCCACAGTTAATTATGAGAAGAATCCATCGGGCCAACTTATGGCAGGGTCGCAAAATGAATCCTCCTTCTCTGTTTTGGAGGTTATTGAAGCTGCCCTTCAAGACATCCCTCTCTCTAATGGCAAGTTCACTTGGTCTAGTTTCAGGCCAAATCCCACCATGACTCTCATTGACAGGTTCCTTCTATCCGACCATATTCCCATCAAATTCGGTTCAGCTTATGCTCGCAGACTAGAAAGAGTCACCTCCGATCATTATCCAATCTGCTTGTTTCTCGGTAATGACCGTTGGGGCTCGACTCCTTTCAGATTCATTAATGTCTGGCTTTCTCACCACTTCTTCCTTCGCACGGTCGAATCATGGTGGAAGACCTCCACCTCTCATGGATGGCCCGACCACGGGTTCATTCAAAAGCTTAAGGGGCTGAAGATGGAGTTGAAACACTGGAACCAATCTGTCTTTGGTAATCAAAAAGAACAAAAGGCCAAGCTTAGCCAAGAACTCGCGACTATTGATACAAAAGAAGATAGTGGCCATCTATCTGATCAAGATTATATCAGAAAAACTGAGATCAAGGCTGAATTGATGATGTTTTCGGCCAAAGAAGAAATTATGTGGAGGAAAAAATGA

Protein sequence

MLGEPKVPSYGGWIKVRNLPLDKWSISTFKKIGDECGGYLETGNKTLSRMDMMEIGIKVRENDTGFIPAEVHLPSSSCNPTVVKIDPFYVEDYSIGYIAGVHGRIPKPPMEFHNPRANHEHEGEQKGKRDSPRAAVLGIKDNVQEKSLSSYRYEVQSAPIDDLFTTTSLSSAIDHQPLIEDPTPLRVEEPDSQSLHQNRDLMATTLIDIEVEDTETEELETEGIRIDPAVYLLYLFPWLTEHGMCIMPMPSRRKTSASTKKKVMWVKELQNLHSTVNYEKNPSGQLMAGSQNESSFSVLEVIEAALQDIPLSNGKFTWSSFRPNPTMTLIDRFLLSDHIPIKFGSAYARRLERVTSDHYPICLFLGNDRWGSTPFRFINVWLSHHFFLRTVESWWKTSTSHGWPDHGFIQKLKGLKMELKHWNQSVFGNQKEQKAKLSQELATIDTKEDSGHLSDQDYIRKTEIKAELMMFSAKEEIMWRKK

Homology

[Close]

BLAST of Spg032604 vs. NCBI nr
Match: CAN66330.1 (hypothetical protein VITISV_000598 [Vitis vinifera])

HSP 1 Score: 155.2 bits (391), Expect = 1.4e-33
Identity = 79/198 (39.90%), Postives = 111/198 (56.06%), Query Frame = 0


Query: 287  MAGSQNESSFSVLE--VIEAALQDIPLSNGKFTWSSFRPNPTMTLIDRFLLSDHIPIKFG 346
            + GS+  SS    +  + E+ L D PL N  FTWS+ + +P    +DRFL S+   + F 
Sbjct: 1672 LGGSRVTSSMRDFDGFIRESELHDSPLRNASFTWSNMQESPVCKRLDRFLYSNEWXLSFP 1731

Query: 347  SAYARRLERVTSDHYPICLFLGNDRWGSTPFRFINVWLSHHFFLRTVESWWKTSTSHGWP 406
             +    L R TSDH+PI L     +WG TPFRF N+WL HH F  +  SWW+    +GW 
Sbjct: 1732 QSLQEVLPRWTSDHWPIVLDTNPFKWGPTPFRFENMWLQHHNFKESFSSWWREFEGNGWE 1791

Query: 407  DHGFIQKLKGLKMELKHWNQSVFGNQKEQKAKLSQELATIDTKEDSGHLSDQDYIRKTEI 466
             H F++KL+ +K +LK WN++ FG  KE+K  +S E+A ID  E  G LS      +   
Sbjct: 1792 GHKFMRKLQFVKAKLKDWNKNTFGLLKERKKSISDEIANIDAIEQEGALSSDLVALRAIR 1851

Query: 467  KAELMMFSAKEEIMWRKK 483
            K EL     +EEI W++K
Sbjct: 1852 KGELEELILREEIXWKQK 1869

[Close]

BLAST of Spg032604 vs. NCBI nr
Match: RVW77758.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])

HSP 1 Score: 154.8 bits (390), Expect = 1.8e-33
Identity = 79/198 (39.90%), Postives = 111/198 (56.06%), Query Frame = 0


Query: 287 MAGSQNESSFSVLE--VIEAALQDIPLSNGKFTWSSFRPNPTMTLIDRFLLSDHIPIKFG 346
           + GS+  SS    +  + E+ L D PL N  FTWS+ + +P    +DRFL S+   + F 
Sbjct: 259 LGGSRVTSSMRDFDGFIRESELHDSPLRNASFTWSNMQESPVCKRLDRFLYSNEWKLSFP 318

Query: 347 SAYARRLERVTSDHYPICLFLGNDRWGSTPFRFINVWLSHHFFLRTVESWWKTSTSHGWP 406
            +    L R TSDH+PI L     +WG TPFRF N+WL HH F  +  SWW+    +GW 
Sbjct: 319 QSLQEVLPRWTSDHWPIVLDTNPFKWGPTPFRFENMWLQHHNFKESFSSWWREFEGNGWE 378

Query: 407 DHGFIQKLKGLKMELKHWNQSVFGNQKEQKAKLSQELATIDTKEDSGHLSDQDYIRKTEI 466
            H F++KL+ +K +LK WN++ FG  KE+K  +S E+A ID  E  G LS      +   
Sbjct: 379 GHKFMRKLQFVKAKLKDWNKNTFGLLKERKKSISDEIANIDAIEQEGALSSDLVALRAIR 438

Query: 467 KAELMMFSAKEEIMWRKK 483
           K EL     +EEI W++K
Sbjct: 439 KGELEELILREEIHWKQK 456

[Close]

BLAST of Spg032604 vs. NCBI nr
Match: RVX20162.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])

HSP 1 Score: 153.7 bits (387), Expect = 4.1e-33
Identity = 79/202 (39.11%), Postives = 112/202 (55.45%), Query Frame = 0


Query: 283 SGQLMAGSQNESSFSVLE--VIEAALQDIPLSNGKFTWSSFRPNPTMTLIDRFLLSDHIP 342
           S + + GS+  SS    +  + E+ L D PL N  FTWS+ + +     +DRFL S+   
Sbjct: 307 SSEKLGGSRFTSSMRDFDGFIRESELHDPPLRNASFTWSNMQESLVCKRLDRFLYSNEWE 366

Query: 343 IKFGSAYARRLERVTSDHYPICLFLGNDRWGSTPFRFINVWLSHHFFLRTVESWWKTSTS 402
             F  +    L R TSDH+PI L     +WG TPFRF N+WL HH F  +  SWW+    
Sbjct: 367 FSFPQSLQEVLPRWTSDHWPIVLDTNPFKWGPTPFRFENMWLQHHSFNESFSSWWREFKG 426

Query: 403 HGWPDHGFIQKLKGLKMELKHWNQSVFGNQKEQKAKLSQELATIDTKEDSGHLSDQDYIR 462
           +GW  H F++KL+ +K +LK WN++ FG  KE+K  +  E+A ID  E  G LS    ++
Sbjct: 427 NGWEGHKFMRKLQFVKAKLKDWNKNTFGMLKERKKTILDEIAIIDANEQEGALSSNLAVQ 486

Query: 463 KTEIKAELMMFSAKEEIMWRKK 483
           +   K EL     +EEI WR+K
Sbjct: 487 RAVRKGELEEIIMREEIHWRQK 508

[Close]

BLAST of Spg032604 vs. NCBI nr
Match: RVW99725.1 (DNA repair protein RAD50 [Vitis vinifera])

HSP 1 Score: 153.3 bits (386), Expect = 5.3e-33
Identity = 78/198 (39.39%), Postives = 112/198 (56.57%), Query Frame = 0


Query: 287 MAGSQNESSFSVLE--VIEAALQDIPLSNGKFTWSSFRPNPTMTLIDRFLLSDHIPIKFG 346
           + GS+  SS    +  + E+ L D PL N  FTWS+ + +P    +DRFL S+   + F 
Sbjct: 73  LGGSRVTSSMRDFDGFIRESELHDPPLRNASFTWSNMQESPVCKRLDRFLYSNEWELSFP 132

Query: 347 SAYARRLERVTSDHYPICLFLGNDRWGSTPFRFINVWLSHHFFLRTVESWWKTSTSHGWP 406
            +    L R TSDH+PI L     +WG TPFRF N+WL H+ F  +  SWW+    +GW 
Sbjct: 133 QSLQEVLPRWTSDHWPIVLDTNPFKWGPTPFRFENMWLQHYNFKESFSSWWREFEGNGWE 192

Query: 407 DHGFIQKLKGLKMELKHWNQSVFGNQKEQKAKLSQELATIDTKEDSGHLSDQDYIRKTEI 466
            H F++KL+ +K +LK WN++ FG  KE+K  +S E+A ID  E  G LS     ++   
Sbjct: 193 GHKFMRKLQFVKAKLKDWNKNTFGMLKERKKTISDEIANIDAIEQEGALSSDLVAQRAIR 252

Query: 467 KAELMMFSAKEEIMWRKK 483
           K EL     +EEI W++K
Sbjct: 253 KGELEELILREEIHWKQK 270

[Close]

BLAST of Spg032604 vs. NCBI nr
Match: CAN59965.1 (hypothetical protein VITISV_022758, partial [Vitis vinifera])

HSP 1 Score: 152.5 bits (384), Expect = 9.1e-33
Identity = 74/180 (41.11%), Postives = 102/180 (56.67%), Query Frame = 0


Query: 303 EAALQDIPLSNGKFTWSSFRPNPTMTLIDRFLLSDHIPIKFGSAYARRLERVTSDHYPIC 362
           E+ L D PL N  FTWS+ + +P    +DRFL S+     F  +    L R TSDH+PI 
Sbjct: 10  ESELHDPPLRNASFTWSNMQESPVCKRLDRFLYSNEWEFSFPQSLQEVLPRWTSDHWPIV 69

Query: 363 LFLGNDRWGSTPFRFINVWLSHHFFLRTVESWWKTSTSHGWPDHGFIQKLKGLKMELKHW 422
           L     +WG TPFRF N+WL HH F  +  SWW+    +GW  H F++KL+ +K +LK W
Sbjct: 70  LDTNPFKWGPTPFRFENMWLQHHSFNESFSSWWREFKGNGWEGHKFMRKLQFVKAKLKDW 129

Query: 423 NQSVFGNQKEQKAKLSQELATIDTKEDSGHLSDQDYIRKTEIKAELMMFSAKEEIMWRKK 482
           N++ FG  KE+K  +  E+A I   E  G LS    +++   K EL     +EEI WR+K
Sbjct: 130 NKNTFGMLKERKKTILDEIAIIXANEQEGALSSNLAVQRAVRKGELEEIIMREEIHWRQK 189

[Close]

BLAST of Spg032604 vs. ExPASy TrEMBL
Match: A5C3T9 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_000598 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 6.8e-34
Identity = 79/198 (39.90%), Postives = 111/198 (56.06%), Query Frame = 0


Query: 287  MAGSQNESSFSVLE--VIEAALQDIPLSNGKFTWSSFRPNPTMTLIDRFLLSDHIPIKFG 346
            + GS+  SS    +  + E+ L D PL N  FTWS+ + +P    +DRFL S+   + F 
Sbjct: 1672 LGGSRVTSSMRDFDGFIRESELHDSPLRNASFTWSNMQESPVCKRLDRFLYSNEWXLSFP 1731

Query: 347  SAYARRLERVTSDHYPICLFLGNDRWGSTPFRFINVWLSHHFFLRTVESWWKTSTSHGWP 406
             +    L R TSDH+PI L     +WG TPFRF N+WL HH F  +  SWW+    +GW 
Sbjct: 1732 QSLQEVLPRWTSDHWPIVLDTNPFKWGPTPFRFENMWLQHHNFKESFSSWWREFEGNGWE 1791

Query: 407  DHGFIQKLKGLKMELKHWNQSVFGNQKEQKAKLSQELATIDTKEDSGHLSDQDYIRKTEI 466
             H F++KL+ +K +LK WN++ FG  KE+K  +S E+A ID  E  G LS      +   
Sbjct: 1792 GHKFMRKLQFVKAKLKDWNKNTFGLLKERKKSISDEIANIDAIEQEGALSSDLVALRAIR 1851

Query: 467  KAELMMFSAKEEIMWRKK 483
            K EL     +EEI W++K
Sbjct: 1852 KGELEELILREEIXWKQK 1869

[Close]

BLAST of Spg032604 vs. ExPASy TrEMBL
Match: A0A438GZW0 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=Pol_7 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 8.9e-34
Identity = 79/198 (39.90%), Postives = 111/198 (56.06%), Query Frame = 0


Query: 287 MAGSQNESSFSVLE--VIEAALQDIPLSNGKFTWSSFRPNPTMTLIDRFLLSDHIPIKFG 346
           + GS+  SS    +  + E+ L D PL N  FTWS+ + +P    +DRFL S+   + F 
Sbjct: 259 LGGSRVTSSMRDFDGFIRESELHDSPLRNASFTWSNMQESPVCKRLDRFLYSNEWKLSFP 318

Query: 347 SAYARRLERVTSDHYPICLFLGNDRWGSTPFRFINVWLSHHFFLRTVESWWKTSTSHGWP 406
            +    L R TSDH+PI L     +WG TPFRF N+WL HH F  +  SWW+    +GW 
Sbjct: 319 QSLQEVLPRWTSDHWPIVLDTNPFKWGPTPFRFENMWLQHHNFKESFSSWWREFEGNGWE 378

Query: 407 DHGFIQKLKGLKMELKHWNQSVFGNQKEQKAKLSQELATIDTKEDSGHLSDQDYIRKTEI 466
            H F++KL+ +K +LK WN++ FG  KE+K  +S E+A ID  E  G LS      +   
Sbjct: 379 GHKFMRKLQFVKAKLKDWNKNTFGLLKERKKSISDEIANIDAIEQEGALSSDLVALRAIR 438

Query: 467 KAELMMFSAKEEIMWRKK 483
           K EL     +EEI W++K
Sbjct: 439 KGELEELILREEIHWKQK 456

[Close]

BLAST of Spg032604 vs. ExPASy TrEMBL
Match: A0A438KG26 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_585 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.0e-33
Identity = 79/202 (39.11%), Postives = 112/202 (55.45%), Query Frame = 0


Query: 283 SGQLMAGSQNESSFSVLE--VIEAALQDIPLSNGKFTWSSFRPNPTMTLIDRFLLSDHIP 342
           S + + GS+  SS    +  + E+ L D PL N  FTWS+ + +     +DRFL S+   
Sbjct: 307 SSEKLGGSRFTSSMRDFDGFIRESELHDPPLRNASFTWSNMQESLVCKRLDRFLYSNEWE 366

Query: 343 IKFGSAYARRLERVTSDHYPICLFLGNDRWGSTPFRFINVWLSHHFFLRTVESWWKTSTS 402
             F  +    L R TSDH+PI L     +WG TPFRF N+WL HH F  +  SWW+    
Sbjct: 367 FSFPQSLQEVLPRWTSDHWPIVLDTNPFKWGPTPFRFENMWLQHHSFNESFSSWWREFKG 426

Query: 403 HGWPDHGFIQKLKGLKMELKHWNQSVFGNQKEQKAKLSQELATIDTKEDSGHLSDQDYIR 462
           +GW  H F++KL+ +K +LK WN++ FG  KE+K  +  E+A ID  E  G LS    ++
Sbjct: 427 NGWEGHKFMRKLQFVKAKLKDWNKNTFGMLKERKKTILDEIAIIDANEQEGALSSNLAVQ 486

Query: 463 KTEIKAELMMFSAKEEIMWRKK 483
           +   K EL     +EEI WR+K
Sbjct: 487 RAVRKGELEEIIMREEIHWRQK 508

[Close]

BLAST of Spg032604 vs. ExPASy TrEMBL
Match: A0A438ISX9 (DNA repair protein RAD50 OS=Vitis vinifera OX=29760 GN=RAD50_6 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 2.6e-33
Identity = 78/198 (39.39%), Postives = 112/198 (56.57%), Query Frame = 0


Query: 287 MAGSQNESSFSVLE--VIEAALQDIPLSNGKFTWSSFRPNPTMTLIDRFLLSDHIPIKFG 346
           + GS+  SS    +  + E+ L D PL N  FTWS+ + +P    +DRFL S+   + F 
Sbjct: 73  LGGSRVTSSMRDFDGFIRESELHDPPLRNASFTWSNMQESPVCKRLDRFLYSNEWELSFP 132

Query: 347 SAYARRLERVTSDHYPICLFLGNDRWGSTPFRFINVWLSHHFFLRTVESWWKTSTSHGWP 406
            +    L R TSDH+PI L     +WG TPFRF N+WL H+ F  +  SWW+    +GW 
Sbjct: 133 QSLQEVLPRWTSDHWPIVLDTNPFKWGPTPFRFENMWLQHYNFKESFSSWWREFEGNGWE 192

Query: 407 DHGFIQKLKGLKMELKHWNQSVFGNQKEQKAKLSQELATIDTKEDSGHLSDQDYIRKTEI 466
            H F++KL+ +K +LK WN++ FG  KE+K  +S E+A ID  E  G LS     ++   
Sbjct: 193 GHKFMRKLQFVKAKLKDWNKNTFGMLKERKKTISDEIANIDAIEQEGALSSDLVAQRAIR 252

Query: 467 KAELMMFSAKEEIMWRKK 483
           K EL     +EEI W++K
Sbjct: 253 KGELEELILREEIHWKQK 270

[Close]

BLAST of Spg032604 vs. ExPASy TrEMBL
Match: A5B7Z9 (Reverse transcriptase domain-containing protein (Fragment) OS=Vitis vinifera OX=29760 GN=VITISV_022758 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 4.4e-33
Identity = 74/180 (41.11%), Postives = 102/180 (56.67%), Query Frame = 0


Query: 303 EAALQDIPLSNGKFTWSSFRPNPTMTLIDRFLLSDHIPIKFGSAYARRLERVTSDHYPIC 362
           E+ L D PL N  FTWS+ + +P    +DRFL S+     F  +    L R TSDH+PI 
Sbjct: 10  ESELHDPPLRNASFTWSNMQESPVCKRLDRFLYSNEWEFSFPQSLQEVLPRWTSDHWPIV 69

Query: 363 LFLGNDRWGSTPFRFINVWLSHHFFLRTVESWWKTSTSHGWPDHGFIQKLKGLKMELKHW 422
           L     +WG TPFRF N+WL HH F  +  SWW+    +GW  H F++KL+ +K +LK W
Sbjct: 70  LDTNPFKWGPTPFRFENMWLQHHSFNESFSSWWREFKGNGWEGHKFMRKLQFVKAKLKDW 129

Query: 423 NQSVFGNQKEQKAKLSQELATIDTKEDSGHLSDQDYIRKTEIKAELMMFSAKEEIMWRKK 482
           N++ FG  KE+K  +  E+A I   E  G LS    +++   K EL     +EEI WR+K
Sbjct: 130 NKNTFGMLKERKKTILDEIAIIXANEQEGALSSNLAVQRAVRKGELEEIIMREEIHWRQK 189

The following BLAST results are available for this feature:

BLAST of Spg032604 vs. NCBI nr


Match Name	E-value	Identity	Description
CAN66330.1	1.4e-33	39.90	hypothetical protein VITISV_000598 [Vitis vinifera]	[more]
RVW77758.1	1.8e-33	39.90	LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]	[more]
RVX20162.1	4.1e-33	39.11	Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]	[more]
RVW99725.1	5.3e-33	39.39	DNA repair protein RAD50 [Vitis vinifera]	[more]
CAN59965.1	9.1e-33	41.11	hypothetical protein VITISV_022758, partial [Vitis vinifera]	[more]

BLAST of Spg032604 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg032604 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A5C3T9	6.8e-34	39.90	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_000598 PE=4 SV=1	[more]
A0A438GZW0	8.9e-34	39.90	LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=Pol_...	[more]
A0A438KG26	2.0e-33	39.11	Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX...	[more]
A0A438ISX9	2.6e-33	39.39	DNA repair protein RAD50 OS=Vitis vinifera OX=29760 GN=RAD50_6 PE=4 SV=1	[more]
A5B7Z9	4.4e-33	41.11	Reverse transcriptase domain-containing protein (Fragment) OS=Vitis vinifera OX=...	[more]

BLAST of Spg032604 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 12..52 e-value: 6.0E-7 score: 29.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..134
None	No IPR available	PANTHER	PTHR33710:SF28	SUBFAMILY NOT NAMED	coord: 296..468
None	No IPR available	PANTHER	PTHR33710	BNAC02G09200D PROTEIN	coord: 296..468
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 262..364

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg032604.1	Spg032604.1	mRNA