Spg032594 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg032594
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLOB domain-containing protein
Locationscaffold11: 6118504 .. 6120090 (+)
RNA-Seq ExpressionSpg032594
SyntenySpg032594
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTCTCTCTACTGAGTCTAAAATGGAGTGCAGTGAGGCAAAATCCAGCCCAACTTCGACCATCCTCCGTTCTCAGTCGCCGTCGTCGTCCTCTTTGCCGCCGCCGCCGAGCATTCAGGCCGGCGTTGTGGTCAGTCCGTGTGCGGCGTGCAAGATTCTCAGGCGGAGATGCGCAGAGAAATGCGTATTGGCGCCCTATTTCCCTCCCTCCGATCCTCTCAAGTTCACCATTGCTCACCGAGTCTTTGGCGCTAGCAACATCATCAAATTGCTTCAGGTACCTCCTCAATCCCTAACTTCCTCTGCTCTCTTGAGTTTTCGTGTTATCTTTCTTGTTTTTAGGTTTTGAAATTGTGAATTCCGGTATGTAAACTGAAAATTAATCTTGGAATCGTAACGACAAGCCATCGAAATAGGAGGAAAATACTGTTTACATGAACAGTTTGGCCAATCGAACTCATCTCTGGCTAACGTGTAACAAGGAAAAAAAACAAAATGAAGTTAGTAGCGAAATTGATCTTACCTTTTCGTTTTGATCAATCGAGCGAATCACGATCGAGTGGAACTGTGTGTGTTTTTGGAAGCATAACAGTGCCGTGGGCGACTTGTGTGTCGAGACAATGAACACGGATGGGGCTCACACACACAACTTGTCCAATCGCAATAATGTGTCCTTATTTTGCTTGGAAATCTGAAAATAATCAATCCTATCTGTTTGTTTGTTTTCGCTCAATGGCCATGTGGAGTAATTATAATCAAACATAATGCAAACTGGAAGAATCAAACAAAGCAGCCCTTGTGTTTGCTTTTTGTCCTCACAGAACAGCCAATCATATTTCAATCTGTTCTTATACAATTCAACCACAACACACCAAACACTTCTGATACCAAATCACTTTATTGAATTCTTCAGGATCTTCCTGAATCACAGAGGGCTGATGCAGTGAGCAGTTTGGTGTACGAAGCAAGTGCAAGAATCAGAGATCCAGTTTACGGGTGTGCAGGGGCCATATGCCAGCTCCAAAAACAGATAAACGAACTGCAAGCAGAGCTAGCCAAGACACAGGCTGAGCTTGTCAACATGCAGTGCCAACAAGCCAATTTGGTGGCTCTGATTTGCAAGGAATTAGCTCAAACGCCGCCACCGGTGCCGCCGCCGGACCACCGCTCGGTTGACAACAATTTCAACATTGCCCCTCCTCAGAGCTACCAAAGCTACTCATCTTTGTTTGAGGATAGCAATATTTGGGAAGCCCTTTGGACATGAGAAAGCAAAAAAACTAGAACATGGGTGCAAAGGGGGAGGAAATTAAAGATTTCTCAGACAAAAGTTTTGGGAAGTCAAAGTTGAGTGGTTTGAAGTAGAATATAAGAAAGTTTAGTAGTTGAATATTGGGTAATATTAGGCAGTTGTTAGGTTAGATGGGTTCCTCATTTGCTCCCTTAAAACCAAGAACAGTGGAGTGAAGAAAAAGGAATGATGTTTACTAGACTAGAGTAATTAGAGCAAAAAGTATTATATCTTAGTATATATCCTTTTTTTTTTTTTTTTGGTTACCTACCATTAACTTCTTAACATTGATGTGTC

mRNA sequence

ATGGAGTGCAGTGAGGCAAAATCCAGCCCAACTTCGACCATCCTCCGTTCTCAGTCGCCGTCGTCGTCCTCTTTGCCGCCGCCGCCGAGCATTCAGGCCGGCGTTGTGGTCAGTCCGTGTGCGGCGTGCAAGATTCTCAGGCGGAGATGCGCAGAGAAATGCGTATTGGCGCCCTATTTCCCTCCCTCCGATCCTCTCAAGTTCACCATTGCTCACCGAGTCTTTGGCGCTAGCAACATCATCAAATTGCTTCAGGATCTTCCTGAATCACAGAGGGCTGATGCAGTGAGCAGTTTGGTGTACGAAGCAAGTGCAAGAATCAGAGATCCAGTTTACGGGTGTGCAGGGGCCATATGCCAGCTCCAAAAACAGATAAACGAACTGCAAGCAGAGCTAGCCAAGACACAGGCTGAGCTTGTCAACATGCAGTGCCAACAAGCCAATTTGGTGGCTCTGATTTGCAAGGAATTAGCTCAAACGCCGCCACCGGTGCCGCCGCCGGACCACCGCTCGGTTGACAACAATTTCAACATTGCCCCTCCTCAGAGCTACCAAAGCTACTCATCTTTGTTTGAGGATAGCAATATTTGGGAAGCCCTTTGGACATGA

Coding sequence (CDS)

ATGGAGTGCAGTGAGGCAAAATCCAGCCCAACTTCGACCATCCTCCGTTCTCAGTCGCCGTCGTCGTCCTCTTTGCCGCCGCCGCCGAGCATTCAGGCCGGCGTTGTGGTCAGTCCGTGTGCGGCGTGCAAGATTCTCAGGCGGAGATGCGCAGAGAAATGCGTATTGGCGCCCTATTTCCCTCCCTCCGATCCTCTCAAGTTCACCATTGCTCACCGAGTCTTTGGCGCTAGCAACATCATCAAATTGCTTCAGGATCTTCCTGAATCACAGAGGGCTGATGCAGTGAGCAGTTTGGTGTACGAAGCAAGTGCAAGAATCAGAGATCCAGTTTACGGGTGTGCAGGGGCCATATGCCAGCTCCAAAAACAGATAAACGAACTGCAAGCAGAGCTAGCCAAGACACAGGCTGAGCTTGTCAACATGCAGTGCCAACAAGCCAATTTGGTGGCTCTGATTTGCAAGGAATTAGCTCAAACGCCGCCACCGGTGCCGCCGCCGGACCACCGCTCGGTTGACAACAATTTCAACATTGCCCCTCCTCAGAGCTACCAAAGCTACTCATCTTTGTTTGAGGATAGCAATATTTGGGAAGCCCTTTGGACATGA

Protein sequence

MECSEAKSSPTSTILRSQSPSSSSLPPPPSIQAGVVVSPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNMQCQQANLVALICKELAQTPPPVPPPDHRSVDNNFNIAPPQSYQSYSSLFEDSNIWEALWT
Homology
BLAST of Spg032594 vs. NCBI nr
Match: XP_022157927.1 (LOB domain-containing protein 11-like [Momordica charantia])

HSP 1 Score: 359.8 bits (922), Expect = 1.6e-95
Identity = 184/202 (91.09%), Postives = 189/202 (93.56%), Query Frame = 0

Query: 1   MECSEAKSSPTSTILRSQSPSSSSLPPPPSIQAGVVVSPCAACKILRRRCAEKCVLAPYF 60
           MECSEAKS+ TSTILRSQSPS S  PPPPSI AGVVVSPCAACKILRRRCAEKCVLAPYF
Sbjct: 1   MECSEAKSNTTSTILRSQSPSPSP-PPPPSIPAGVVVSPCAACKILRRRCAEKCVLAPYF 60

Query: 61  PPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICQ 120
           PPSDP KFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICQ
Sbjct: 61  PPSDPFKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICQ 120

Query: 121 LQKQINELQAELAKTQAELVNMQCQQANLVALICKELAQTPPPVPPPDHRSVDNNFNIAP 180
           LQKQINELQAELAKTQAELVNM C QA+LVALICKELAQTPPPVPPPDHRS+DNNFNIA 
Sbjct: 121 LQKQINELQAELAKTQAELVNMHCHQASLVALICKELAQTPPPVPPPDHRSLDNNFNIAT 180

Query: 181 PQSYQSYSSLFEDSNIWEALWT 203
           PQSYQ+Y+   EDSNIWE LWT
Sbjct: 181 PQSYQNYTPFLEDSNIWEPLWT 201

BLAST of Spg032594 vs. NCBI nr
Match: XP_038895012.1 (LOB domain-containing protein 1-like [Benincasa hispida])

HSP 1 Score: 343.6 bits (880), Expect = 1.2e-90
Identity = 178/203 (87.68%), Postives = 185/203 (91.13%), Query Frame = 0

Query: 1   MECSEAKSSPTSTILRSQSPSSSSLPPPPSIQAGVVVSPCAACKILRRRCAEKCVLAPYF 60
           MEC EAKS   STI  SQSPSSS   PPPSIQ GVVVSPCAACKILRRRCAEKCVLAPYF
Sbjct: 1   MECCEAKSGQASTIFLSQSPSSSP-SPPPSIQTGVVVSPCAACKILRRRCAEKCVLAPYF 60

Query: 61  PPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICQ 120
           PPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEA+ARIRDPVYGCAGAICQ
Sbjct: 61  PPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEANARIRDPVYGCAGAICQ 120

Query: 121 LQKQINELQAELAKTQAELVNMQCQQANLVALICKELAQTPPPVPP-PDHRSVDNNFNIA 180
           LQKQINELQAELAKTQAELVN+ C+QANLVALICKEL Q PPP+ P PDHRS+DNNFNIA
Sbjct: 121 LQKQINELQAELAKTQAELVNIHCRQANLVALICKELTQLPPPMSPLPDHRSLDNNFNIA 180

Query: 181 PPQSYQSYSSLFEDSNIWEALWT 203
            PQSYQ Y+SLFEDSNIW+ LWT
Sbjct: 181 TPQSYQGYTSLFEDSNIWDPLWT 202

BLAST of Spg032594 vs. NCBI nr
Match: XP_022998902.1 (LOB domain-containing protein 1-like [Cucurbita maxima])

HSP 1 Score: 335.9 bits (860), Expect = 2.4e-88
Identity = 173/202 (85.64%), Postives = 181/202 (89.60%), Query Frame = 0

Query: 1   MECSEAKSSPTSTILRSQSPSSSSLPPPPSIQAGVVVSPCAACKILRRRCAEKCVLAPYF 60
           MECS+AKS PTSTILRSQSP  +   PPP +QAGVVV+PCAACKILRRRCAEKCVLAPYF
Sbjct: 1   MECSDAKSGPTSTILRSQSPPPT---PPPCVQAGVVVTPCAACKILRRRCAEKCVLAPYF 60

Query: 61  PPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICQ 120
           PPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAIC 
Sbjct: 61  PPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICH 120

Query: 121 LQKQINELQAELAKTQAELVNMQCQQANLVALICKELAQTPPPVPPPDHRSVDNNFNIAP 180
           LQKQINELQAE+AKT AELVNMQC QANLVALICKEL QTP P PPPDH S+DNNF+ A 
Sbjct: 121 LQKQINELQAEVAKTHAELVNMQCHQANLVALICKELTQTPAPTPPPDHCSLDNNFSTAT 180

Query: 181 PQSYQSYSSLFEDSNIWEALWT 203
           PQSY     LF+DSNIWEALWT
Sbjct: 181 PQSY----PLFDDSNIWEALWT 195

BLAST of Spg032594 vs. NCBI nr
Match: XP_023525656.1 (LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 332.4 bits (851), Expect = 2.7e-87
Identity = 171/199 (85.93%), Postives = 179/199 (89.95%), Query Frame = 0

Query: 5   EAKSSPTSTILRSQSPSSSSLPPPPSIQAGVVVSPCAACKILRRRCAEKCVLAPYFPPSD 64
           +AKSSPTS I RSQSPSSS LPPPPS+QAG+VVSPCAACK LRRRC EKCVLAPYFPPSD
Sbjct: 2   DAKSSPTSNIFRSQSPSSSPLPPPPSVQAGLVVSPCAACKTLRRRCTEKCVLAPYFPPSD 61

Query: 65  PLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQ 124
           PLKFTIAHR+FGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAIC LQKQ
Sbjct: 62  PLKFTIAHRIFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICHLQKQ 121

Query: 125 INELQAELAKTQAELVNMQCQQANLVALICKELAQTPPPV-PPPDHRSVDNNFNIAPPQS 184
           INELQAE+AKT AELVNMQC QANLVALICKEL QTP P  PPPDH S+DNNF+ A PQS
Sbjct: 122 INELQAEVAKTHAELVNMQCHQANLVALICKELTQTPAPTPPPPDHCSLDNNFSSATPQS 181

Query: 185 YQSYSSLFEDSNIWEALWT 203
           Y     LF+DSNIWEALWT
Sbjct: 182 Y----PLFDDSNIWEALWT 196

BLAST of Spg032594 vs. NCBI nr
Match: XP_008463550.1 (PREDICTED: LOB domain-containing protein 1-like [Cucumis melo])

HSP 1 Score: 331.3 bits (848), Expect = 6.0e-87
Identity = 174/206 (84.47%), Postives = 184/206 (89.32%), Query Frame = 0

Query: 1   MECSEAKSSPTSTILRSQSPSSSSLPPPPSIQAGVVVSPCAACKILRRRCAEKCVLAPYF 60
           ME  E KSSPTST+L SQSPS S   PPP++QA VVVSPCAACKILRRRCAEKCVLAPYF
Sbjct: 1   MESREVKSSPTSTLL-SQSPSPSP-SPPPTVQAPVVVSPCAACKILRRRCAEKCVLAPYF 60

Query: 61  PPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICQ 120
           PPSDPLKFTIAHR+FGASNIIKLL DLP+SQRADAVSSLVYEASARIRDPVYGCAGAICQ
Sbjct: 61  PPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQ 120

Query: 121 LQKQINELQAELAKTQAELVNMQCQQANLVALICKELAQTPPPVPP----PDHRSVDNNF 180
           LQKQINELQAELAKTQAELVN+ C Q NLVALICKELAQTPPP+      PDHRS+DNNF
Sbjct: 121 LQKQINELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSLSLLPDHRSLDNNF 180

Query: 181 NIAPPQSYQSYSSLFEDSNIWEALWT 203
           NIA PQSYQ Y+SLFEDSNIW+ LWT
Sbjct: 181 NIATPQSYQGYTSLFEDSNIWDPLWT 204

BLAST of Spg032594 vs. ExPASy Swiss-Prot
Match: Q9SK08 (LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2)

HSP 1 Score: 205.7 bits (522), Expect = 5.0e-52
Identity = 123/216 (56.94%), Postives = 151/216 (69.91%), Query Frame = 0

Query: 6   AKSSPTSTILRSQSPSSSSLPPPPS----IQAGVVVSPCAACKILRRRCAEKCVLAPYFP 65
           AK + T+T + S SP+SS  PPPPS     Q  VV+SPCAACKILRRRCA+KCVLAPYFP
Sbjct: 19  AKVTETTTPVNSPSPTSSP-PPPPSPQQPPQPPVVLSPCAACKILRRRCADKCVLAPYFP 78

Query: 66  PSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICQL 125
           P+DP KFTIAHRVFGASNIIK LQ+LPESQR DAV+S+VYEA AR+RDPVYGCAGAI  L
Sbjct: 79  PTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGAIYHL 138

Query: 126 QKQINELQAELAKTQAELVNMQCQQANLVALICKELAQTPPPVPPPDHR--SVDNNFN-- 185
           Q+Q++ELQA+LAKTQ ELV MQ Q+++L+ LI   + QT   V     +  S +++F   
Sbjct: 139 QRQVSELQAQLAKTQVELVGMQLQRSSLLELI-YNMEQTKLSVQEQGQQKMSFESSFESG 198

Query: 186 ---IAPPQSYQSYSSLFEDSN--------IWEALWT 203
              I+ P    +     ED+N         W+ LWT
Sbjct: 199 DEFISSPDEESNDLGFLEDNNNNNNSSMSWWDPLWT 232

BLAST of Spg032594 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.1e-51
Identity = 118/203 (58.13%), Postives = 142/203 (69.95%), Query Frame = 0

Query: 1   MECSEAKSSPTSTILRSQSPSSSSLPPPPSIQAGVVVSPCAACKILRRRCAEKCVLAPYF 60
           ME     S  T+ I+      SSS  PPPS+   VV+SPCAACKILRRRCAE+CVLAPYF
Sbjct: 1   MESKSDASVATTPII------SSSSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYF 60

Query: 61  PPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICQ 120
           PP+DP KFTIAHRVFGASNIIK LQ+LPESQR DAV+S+VYEA ARIRDPVYGCAGAI  
Sbjct: 61  PPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYH 120

Query: 121 LQKQINELQAELAKTQAELVNMQCQQANLVALICKELAQTPPPVPPPDHRSVD-NNFNIA 180
           LQ+Q++ELQA+LAK Q E+VNMQ Q++NL+ LI     Q        D+ S + N+    
Sbjct: 121 LQRQVSELQAQLAKAQVEMVNMQFQRSNLLELIYNMDQQQK---QEQDNMSFESNDLGFL 180

Query: 181 PPQSYQSYSSLFEDSNIWEALWT 203
             +S  + S L+     W+ LWT
Sbjct: 181 EDKSNTNSSMLW-----WDPLWT 189

BLAST of Spg032594 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 155.6 bits (392), Expect = 5.9e-37
Identity = 71/108 (65.74%), Postives = 90/108 (83.33%), Query Frame = 0

Query: 38  SPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVS 97
           SPCA+CK+LRRRCA+ C+ APYFPP DP KF I H+VFGASN+ K+LQ+LP  QRADAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 98  SLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNMQCQ 146
           SLV+EA+AR+RDPVYGC GAI  LQ Q+++LQ +LA  QAE++ +Q Q
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ 114

BLAST of Spg032594 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 5.0e-36
Identity = 80/167 (47.90%), Postives = 114/167 (68.26%), Query Frame = 0

Query: 38  SPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVS 97
           SPCAACK+LRRRCA+ CV +PYFP  +P KF   HRVFGASN+ K+LQ+LP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 98  SLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNMQCQQANLVA--LICK 157
           S+VYEA+AR+RDPVYGC GAI  LQ+QI+ LQA+LA  QAE+V+++ +Q+       +C 
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNFPGHGLCP 131

Query: 158 ELAQTPPPVPPPDHRSVDNNFNIAPPQSYQSYSSLFEDSNIWEALWT 203
           +   +P     P  + V    N    +   S+  + +++++ E++W+
Sbjct: 132 D---SPSSSGSPSSKQVSPQDN----KGMFSHMDIVDEASLGESMWS 171

BLAST of Spg032594 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2)

HSP 1 Score: 142.5 bits (358), Expect = 5.2e-33
Identity = 66/121 (54.55%), Postives = 92/121 (76.03%), Query Frame = 0

Query: 27  PPPSIQAGVVVSPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRVFGASNIIKLLQD 86
           PP ++     ++PCAACK+LRRRCA++C  +PYF P +P KF   H+VFGASN+ K+L +
Sbjct: 36  PPGTLN---TITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLME 95

Query: 87  LPESQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNMQCQQ 146
           +PESQRADA +SLVYEA+ R+RDPVYGC GAI  LQ+Q+  LQAEL   ++E++  + ++
Sbjct: 96  VPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQRE 153

Query: 147 A 148
           A
Sbjct: 156 A 153

BLAST of Spg032594 vs. ExPASy TrEMBL
Match: A0A6J1DVT7 (LOB domain-containing protein 11-like OS=Momordica charantia OX=3673 GN=LOC111024535 PE=3 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 7.6e-96
Identity = 184/202 (91.09%), Postives = 189/202 (93.56%), Query Frame = 0

Query: 1   MECSEAKSSPTSTILRSQSPSSSSLPPPPSIQAGVVVSPCAACKILRRRCAEKCVLAPYF 60
           MECSEAKS+ TSTILRSQSPS S  PPPPSI AGVVVSPCAACKILRRRCAEKCVLAPYF
Sbjct: 1   MECSEAKSNTTSTILRSQSPSPSP-PPPPSIPAGVVVSPCAACKILRRRCAEKCVLAPYF 60

Query: 61  PPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICQ 120
           PPSDP KFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICQ
Sbjct: 61  PPSDPFKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICQ 120

Query: 121 LQKQINELQAELAKTQAELVNMQCQQANLVALICKELAQTPPPVPPPDHRSVDNNFNIAP 180
           LQKQINELQAELAKTQAELVNM C QA+LVALICKELAQTPPPVPPPDHRS+DNNFNIA 
Sbjct: 121 LQKQINELQAELAKTQAELVNMHCHQASLVALICKELAQTPPPVPPPDHRSLDNNFNIAT 180

Query: 181 PQSYQSYSSLFEDSNIWEALWT 203
           PQSYQ+Y+   EDSNIWE LWT
Sbjct: 181 PQSYQNYTPFLEDSNIWEPLWT 201

BLAST of Spg032594 vs. ExPASy TrEMBL
Match: A0A6J1K9A0 (LOB domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111493422 PE=3 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.2e-88
Identity = 173/202 (85.64%), Postives = 181/202 (89.60%), Query Frame = 0

Query: 1   MECSEAKSSPTSTILRSQSPSSSSLPPPPSIQAGVVVSPCAACKILRRRCAEKCVLAPYF 60
           MECS+AKS PTSTILRSQSP  +   PPP +QAGVVV+PCAACKILRRRCAEKCVLAPYF
Sbjct: 1   MECSDAKSGPTSTILRSQSPPPT---PPPCVQAGVVVTPCAACKILRRRCAEKCVLAPYF 60

Query: 61  PPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICQ 120
           PPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAIC 
Sbjct: 61  PPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICH 120

Query: 121 LQKQINELQAELAKTQAELVNMQCQQANLVALICKELAQTPPPVPPPDHRSVDNNFNIAP 180
           LQKQINELQAE+AKT AELVNMQC QANLVALICKEL QTP P PPPDH S+DNNF+ A 
Sbjct: 121 LQKQINELQAEVAKTHAELVNMQCHQANLVALICKELTQTPAPTPPPDHCSLDNNFSTAT 180

Query: 181 PQSYQSYSSLFEDSNIWEALWT 203
           PQSY     LF+DSNIWEALWT
Sbjct: 181 PQSY----PLFDDSNIWEALWT 195

BLAST of Spg032594 vs. ExPASy TrEMBL
Match: A0A1S3CK12 (LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501671 PE=3 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.9e-87
Identity = 174/206 (84.47%), Postives = 184/206 (89.32%), Query Frame = 0

Query: 1   MECSEAKSSPTSTILRSQSPSSSSLPPPPSIQAGVVVSPCAACKILRRRCAEKCVLAPYF 60
           ME  E KSSPTST+L SQSPS S   PPP++QA VVVSPCAACKILRRRCAEKCVLAPYF
Sbjct: 1   MESREVKSSPTSTLL-SQSPSPSP-SPPPTVQAPVVVSPCAACKILRRRCAEKCVLAPYF 60

Query: 61  PPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICQ 120
           PPSDPLKFTIAHR+FGASNIIKLL DLP+SQRADAVSSLVYEASARIRDPVYGCAGAICQ
Sbjct: 61  PPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQ 120

Query: 121 LQKQINELQAELAKTQAELVNMQCQQANLVALICKELAQTPPPVPP----PDHRSVDNNF 180
           LQKQINELQAELAKTQAELVN+ C Q NLVALICKELAQTPPP+      PDHRS+DNNF
Sbjct: 121 LQKQINELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSLSLLPDHRSLDNNF 180

Query: 181 NIAPPQSYQSYSSLFEDSNIWEALWT 203
           NIA PQSYQ Y+SLFEDSNIW+ LWT
Sbjct: 181 NIATPQSYQGYTSLFEDSNIWDPLWT 204

BLAST of Spg032594 vs. ExPASy TrEMBL
Match: A0A6J1I3T6 (LOB domain-containing protein 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469412 PE=3 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 5.0e-87
Identity = 169/198 (85.35%), Postives = 179/198 (90.40%), Query Frame = 0

Query: 5   EAKSSPTSTILRSQSPSSSSLPPPPSIQAGVVVSPCAACKILRRRCAEKCVLAPYFPPSD 64
           +AKSSPTSTI RSQSPSSS LPPPPS+QAG+VVSPCAACK LRRRC EKCVLAPYFPPSD
Sbjct: 2   DAKSSPTSTIFRSQSPSSSPLPPPPSVQAGLVVSPCAACKTLRRRCTEKCVLAPYFPPSD 61

Query: 65  PLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQ 124
           PLKFTIAHR+FGASNIIKLLQDLPESQR DAVSSLVYEASARIRDPVYGCAGAI QLQKQ
Sbjct: 62  PLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQKQ 121

Query: 125 INELQAELAKTQAELVNMQCQQANLVALICKELAQTPPPVPPPDHRSVDNNFNIAPPQSY 184
           INELQAELAKTQAELVN+   Q NLVALICKELAQTPPPV PPDH ++DNN N A P   
Sbjct: 122 INELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSPPDHHALDNNLNTAIP--- 181

Query: 185 QSYSSLFEDSNIWEALWT 203
           QSY++LFEDS+IWE LWT
Sbjct: 182 QSYTNLFEDSSIWEPLWT 196

BLAST of Spg032594 vs. ExPASy TrEMBL
Match: A0A6J1GBV4 (LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111452554 PE=3 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 8.5e-87
Identity = 173/203 (85.22%), Postives = 180/203 (88.67%), Query Frame = 0

Query: 1   MECSEAKSSPTSTILRSQSPSSSSLPPPPSIQAGVVVSPCAACKILRRRCAEKCVLAPYF 60
           MECS+AKS PTS ILRSQ   SS  PPPP +QAGVVV+PCAACKILRRRCAEKCVLAPYF
Sbjct: 1   MECSDAKSGPTSIILRSQ---SSPPPPPPCVQAGVVVTPCAACKILRRRCAEKCVLAPYF 60

Query: 61  PPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICQ 120
           PPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAIC 
Sbjct: 61  PPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICH 120

Query: 121 LQKQINELQAELAKTQAELVNMQCQQANLVALICKELAQTPPPV-PPPDHRSVDNNFNIA 180
           LQKQINELQAE+AKT AELVNMQC QANLVALICKEL QTP P  PPPDH S+DNNF+ A
Sbjct: 121 LQKQINELQAEVAKTHAELVNMQCHQANLVALICKELTQTPAPTPPPPDHCSLDNNFSTA 180

Query: 181 PPQSYQSYSSLFEDSNIWEALWT 203
            PQSY     LF+DSNIWEALWT
Sbjct: 181 TPQSY----PLFDDSNIWEALWT 196

BLAST of Spg032594 vs. TAIR 10
Match: AT2G28500.1 (LOB domain-containing protein 11 )

HSP 1 Score: 205.7 bits (522), Expect = 3.5e-53
Identity = 123/216 (56.94%), Postives = 151/216 (69.91%), Query Frame = 0

Query: 6   AKSSPTSTILRSQSPSSSSLPPPPS----IQAGVVVSPCAACKILRRRCAEKCVLAPYFP 65
           AK + T+T + S SP+SS  PPPPS     Q  VV+SPCAACKILRRRCA+KCVLAPYFP
Sbjct: 19  AKVTETTTPVNSPSPTSSP-PPPPSPQQPPQPPVVLSPCAACKILRRRCADKCVLAPYFP 78

Query: 66  PSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICQL 125
           P+DP KFTIAHRVFGASNIIK LQ+LPESQR DAV+S+VYEA AR+RDPVYGCAGAI  L
Sbjct: 79  PTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGAIYHL 138

Query: 126 QKQINELQAELAKTQAELVNMQCQQANLVALICKELAQTPPPVPPPDHR--SVDNNFN-- 185
           Q+Q++ELQA+LAKTQ ELV MQ Q+++L+ LI   + QT   V     +  S +++F   
Sbjct: 139 QRQVSELQAQLAKTQVELVGMQLQRSSLLELI-YNMEQTKLSVQEQGQQKMSFESSFESG 198

Query: 186 ---IAPPQSYQSYSSLFEDSN--------IWEALWT 203
              I+ P    +     ED+N         W+ LWT
Sbjct: 199 DEFISSPDEESNDLGFLEDNNNNNNSSMSWWDPLWT 232

BLAST of Spg032594 vs. TAIR 10
Match: AT1G07900.1 (LOB domain-containing protein 1 )

HSP 1 Score: 204.5 bits (519), Expect = 7.9e-53
Identity = 118/203 (58.13%), Postives = 142/203 (69.95%), Query Frame = 0

Query: 1   MECSEAKSSPTSTILRSQSPSSSSLPPPPSIQAGVVVSPCAACKILRRRCAEKCVLAPYF 60
           ME     S  T+ I+      SSS  PPPS+   VV+SPCAACKILRRRCAE+CVLAPYF
Sbjct: 1   MESKSDASVATTPII------SSSSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYF 60

Query: 61  PPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICQ 120
           PP+DP KFTIAHRVFGASNIIK LQ+LPESQR DAV+S+VYEA ARIRDPVYGCAGAI  
Sbjct: 61  PPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYH 120

Query: 121 LQKQINELQAELAKTQAELVNMQCQQANLVALICKELAQTPPPVPPPDHRSVD-NNFNIA 180
           LQ+Q++ELQA+LAK Q E+VNMQ Q++NL+ LI     Q        D+ S + N+    
Sbjct: 121 LQRQVSELQAQLAKAQVEMVNMQFQRSNLLELIYNMDQQQK---QEQDNMSFESNDLGFL 180

Query: 181 PPQSYQSYSSLFEDSNIWEALWT 203
             +S  + S L+     W+ LWT
Sbjct: 181 EDKSNTNSSMLW-----WDPLWT 189

BLAST of Spg032594 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 155.6 bits (392), Expect = 4.2e-38
Identity = 71/108 (65.74%), Postives = 90/108 (83.33%), Query Frame = 0

Query: 38  SPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVS 97
           SPCA+CK+LRRRCA+ C+ APYFPP DP KF I H+VFGASN+ K+LQ+LP  QRADAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 98  SLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNMQCQ 146
           SLV+EA+AR+RDPVYGC GAI  LQ Q+++LQ +LA  QAE++ +Q Q
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ 114

BLAST of Spg032594 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 152.5 bits (384), Expect = 3.6e-37
Identity = 80/167 (47.90%), Postives = 114/167 (68.26%), Query Frame = 0

Query: 38  SPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVS 97
           SPCAACK+LRRRCA+ CV +PYFP  +P KF   HRVFGASN+ K+LQ+LP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 98  SLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNMQCQQANLVA--LICK 157
           S+VYEA+AR+RDPVYGC GAI  LQ+QI+ LQA+LA  QAE+V+++ +Q+       +C 
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNFPGHGLCP 131

Query: 158 ELAQTPPPVPPPDHRSVDNNFNIAPPQSYQSYSSLFEDSNIWEALWT 203
           +   +P     P  + V    N    +   S+  + +++++ E++W+
Sbjct: 132 D---SPSSSGSPSSKQVSPQDN----KGMFSHMDIVDEASLGESMWS 171

BLAST of Spg032594 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 )

HSP 1 Score: 142.5 bits (358), Expect = 3.7e-34
Identity = 66/121 (54.55%), Postives = 92/121 (76.03%), Query Frame = 0

Query: 27  PPPSIQAGVVVSPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRVFGASNIIKLLQD 86
           PP ++     ++PCAACK+LRRRCA++C  +PYF P +P KF   H+VFGASN+ K+L +
Sbjct: 36  PPGTLN---TITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLME 95

Query: 87  LPESQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNMQCQQ 146
           +PESQRADA +SLVYEA+ R+RDPVYGC GAI  LQ+Q+  LQAEL   ++E++  + ++
Sbjct: 96  VPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQRE 153

Query: 147 A 148
           A
Sbjct: 156 A 153

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022157927.11.6e-9591.09LOB domain-containing protein 11-like [Momordica charantia][more]
XP_038895012.11.2e-9087.68LOB domain-containing protein 1-like [Benincasa hispida][more]
XP_022998902.12.4e-8885.64LOB domain-containing protein 1-like [Cucurbita maxima][more]
XP_023525656.12.7e-8785.93LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo][more]
XP_008463550.16.0e-8784.47PREDICTED: LOB domain-containing protein 1-like [Cucumis melo][more]
Match NameE-valueIdentityDescription
Q9SK085.0e-5256.94LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 S... [more]
Q9LQR01.1e-5158.13LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=... [more]
Q8LBW35.9e-3765.74LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S... [more]
Q9SHE95.0e-3647.90LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=... [more]
Q8L5T55.2e-3354.55LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 S... [more]
Match NameE-valueIdentityDescription
A0A6J1DVT77.6e-9691.09LOB domain-containing protein 11-like OS=Momordica charantia OX=3673 GN=LOC11102... [more]
A0A6J1K9A01.2e-8885.64LOB domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111493422... [more]
A0A1S3CK122.9e-8784.47LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501671 PE=... [more]
A0A6J1I3T65.0e-8785.35LOB domain-containing protein 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1GBV48.5e-8785.22LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114525... [more]
Match NameE-valueIdentityDescription
AT2G28500.13.5e-5356.94LOB domain-containing protein 11 [more]
AT1G07900.17.9e-5358.13LOB domain-containing protein 1 [more]
AT2G30130.14.2e-3865.74Lateral organ boundaries (LOB) domain family protein [more]
AT1G31320.13.6e-3747.90LOB domain-containing protein 4 [more]
AT2G40470.13.7e-3454.55LOB domain-containing protein 15 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 118..145
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availablePANTHERPTHR31301:SF137LOB DOMAIN-CONTAINING PROTEIN 1coord: 20..201
NoneNo IPR availablePANTHERPTHR31301LOB DOMAIN-CONTAINING PROTEIN 4-RELATEDcoord: 20..201
IPR004883Lateral organ boundaries, LOBPFAMPF03195LOBcoord: 39..136
e-value: 3.1E-41
score: 140.0
IPR004883Lateral organ boundaries, LOBPROSITEPS50891LOBcoord: 38..139
score: 26.898603

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg032594.1Spg032594.1mRNA