Spg032559 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg032559
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold3: 23162341 .. 23164072 (-)
RNA-Seq Expression	Spg032559
Synteny	Spg032559

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAACACGCCAAAATCATCTTCATCTCGCAAGATTACTCGATCTCAGAGTAATCAACCTGCCCAAAGTTCTGAACCAAGTGCTCGACGCCAAGAAGAGCAGCTCGAACCTACCTTGCACGAAACGAGAGGAACGAGACCCATGGGTTTCTCGCTGGCGGTTGTGGACCCAAGAACCACTGTTCAAACTCCTTCTTCCTCGACAATGTCGACCACTTTGAGGGAGAATCCAAGTAGTTCTCGCCTAAGAAGGTCCACACGCACCGATTCCCTCCACAAAACCCAAAATCCCGCGGGCCAACAGCTGAGGAAACGCTCGAGGGAATGGTTTGAGATGTTTAGGGAGATGGGAGCCCAAAGCGTGCGACTCTTGAAGAAGAAGCAAGATTGCGTGATGCTGAAGAAGCTGCAAAAATCGGAGAGAGCTCTCGGCAAGGAGACACTCCGACGGGTAAAATCTCTAAACCTTCTTCTCTAATCCATCTTCTTCTTGCAGGGACAAGACTTTTGTGATATACAGTGCAAGGAAGAAGGATTCAAAGAAGGCTGCACCCGAAAAGCCTATGATCGTTGAGCCCCTTAAAGTGGCTAGAATGCCACTGGATGTTTTCGAAGAGATGATCCGGCAAGCCGTGGCACAAGCCCTCATTATTGCCGAAGGTTATAGGGCTGAGCAAGATGCACTCAGGGAAATTCGGGCAGAAAAAGAGATGGAAAATCAGAGCATGAGGGAAGAGGATGAGTTTGCAAGAAAGAGAGACTTGGAAGAGAAAAGGGAAGCTGAGAAAAAGAAGGAAGAAGAAAAACAAGAGGCCGAGAGGGCCATACAAGCTGAGAAAGAGAGAAAAAAAGATGAAGAACTCAGGAGCGTAGCTGCTGAACTTCACCTCCTTGAGCAAGAAAAAGAAAGAAGAGAAAATTTGAAAGAAGAAGAAACACGGAGAAAAGAAGCTAAGGACTTCCTTGCAGCTTTTGAGCCACTACAGAAGACTCAAAGTGAGGTGGAACAGCTGCAAGAAGTGGAGGAAGAGGCCCTTGAAGGGCCAAGTGAAGAAAAATCAGAAAAAGAAAAAGATGAAGAAATCACAGGCCAGAATGCGACCGCATTTGGGCCGCATTCTGAAGAAGGCCAAGAAAAGGCCACTGAAGGAGAGCAAGCTGATGAGGCCTTGGATCCTTTGTTTGAATATGATGTTAGAGGACCTCCACCAACTGCTGATAGTACCTCTTCGGGAGAGAAGAAGGATGAAGAGGAAGTTGAAAAAGAGAAGGCCGAGACCTCCAGTGATTCAGAAACTGAGTCAGATTCAGAGATAAAGGAATTGGATGATGACCAAATTCCTATCTCTGCAGCTTTGAGGAAGAAAAGAAAAAGAGAACTGAGAGCTGAAAGGAGGACTAAGAATAAAGATGACCCCATTTTTGCCAAGAGGCCGAGGACAAGGTCCATGGATGCCTCTCCTGCAATTCCTCCTACCTCCACACCTGTCAAACCAAAAGCCAAATCGCCTAAAGCTCAATCACCAAAGAATCCATTTCCTGAAGTCTTCAAGGATGTTAATTTCCAGGAGAAGGTGGAAATTATGAGAAAAAGAGACTTCCTGAACGAGAAGGGATTCTCCAACAAAGCAGGGACTTTGCCAGACTTTGTGACTAAAGGGAATGATGCCATCAAGAACCCTTGCCATCAAGAACCGGATCAAGGCACCCTTGCATCCAAGAGGGAATGA

mRNA sequence

ATGAAGAACACGCCAAAATCATCTTCATCTCGCAAGATTACTCGATCTCAGAGTAATCAACCTGCCCAAAGTTCTGAACCAAGTGCTCGACGCCAAGAAGAGCAGCTCGAACCTACCTTGCACGAAACGAGAGGAACGAGACCCATGGGTTTCTCGCTGGCGGTTGTGGACCCAAGAACCACTGTTCAAACTCCTTCTTCCTCGACAATGTCGACCACTTTGAGGGAGAATCCAAGTAGTTCTCGCCTAAGAAGGTCCACACGCACCGATTCCCTCCACAAAACCCAAAATCCCGCGGGCCAACAGCTGAGGAAACGCTCGAGGGAATGGGACAAGACTTTTGTGATATACAGTGCAAGGAAGAAGGATTCAAAGAAGGCTGCACCCGAAAAGCCTATGATCGTTGAGCCCCTTAAAGTGGCTAGAATGCCACTGGATGTTTTCGAAGAGATGATCCGGCAAGCCGTGGCACAAGCCCTCATTATTGCCGAAGGTTATAGGGCTGAGCAAGATGCACTCAGGGAAATTCGGGCAGAAAAAGAGATGGAAAATCAGAGCATGAGGGAAGAGGATGAGTTTGCAAGAAAGAGAGACTTGGAAGAGAAAAGGGAAGCTGAGAAAAAGAAGGAAGAAGAAAAACAAGAGGCCGAGAGGGCCATACAAGCTGAGAAAGAGAGAAAAAAAGATGAAGAACTCAGGAGCGTAGCTGCTGAACTTCACCTCCTTGAGCAAGAAAAAGAAAGAAGAGAAAATTTGAAAGAAGAAGAAACACGGAGAAAAGAAGCTAAGGACTTCCTTGCAGCTTTTGAGCCACTACAGAAGACTCAAAGTGAGGTGGAACAGCTGCAAGAAGTGGAGGAAGAGGCCCTTGAAGGGCCAAGTGAAGAAAAATCAGAAAAAGAAAAAGATGAAGAAATCACAGGCCAGAATGCGACCGCATTTGGGCCGCATTCTGAAGAAGGCCAAGAAAAGGCCACTGAAGGAGAGCAAGCTGATGAGGCCTTGGATCCTTTGTTTGAATATGATGTTAGAGGACCTCCACCAACTGCTGATAGTACCTCTTCGGGAGAGAAGAAGGATGAAGAGGAAGTTGAAAAAGAGAAGGCCGAGACCTCCAGTGATTCAGAAACTGAGTCAGATTCAGAGATAAAGGAATTGGATGATGACCAAATTCCTATCTCTGCAGCTTTGAGGAAGAAAAGAAAAAGAGAACTGAGAGCTGAAAGGAGGACTAAGAATAAAGATGACCCCATTTTTGCCAAGAGGCCGAGGACAAGGTCCATGGATGCCTCTCCTGCAATTCCTCCTACCTCCACACCTGTCAAACCAAAAGCCAAATCGCCTAAAGCTCAATCACCAAAGAATCCATTTCCTGAAGTCTTCAAGGATGTTAATTTCCAGGAGAAGGTGGAAATTATGAGAAAAAGAGACTTCCTGAACGAGAAGGGATTCTCCAACAAAGCAGGGACTTTGCCAGACTTTGTGACTAAAGGGAATGATGCCATCAAGAACCCTTGCCATCAAGAACCGGATCAAGGCACCCTTGCATCCAAGAGGGAATGA

Coding sequence (CDS)

ATGAAGAACACGCCAAAATCATCTTCATCTCGCAAGATTACTCGATCTCAGAGTAATCAACCTGCCCAAAGTTCTGAACCAAGTGCTCGACGCCAAGAAGAGCAGCTCGAACCTACCTTGCACGAAACGAGAGGAACGAGACCCATGGGTTTCTCGCTGGCGGTTGTGGACCCAAGAACCACTGTTCAAACTCCTTCTTCCTCGACAATGTCGACCACTTTGAGGGAGAATCCAAGTAGTTCTCGCCTAAGAAGGTCCACACGCACCGATTCCCTCCACAAAACCCAAAATCCCGCGGGCCAACAGCTGAGGAAACGCTCGAGGGAATGGGACAAGACTTTTGTGATATACAGTGCAAGGAAGAAGGATTCAAAGAAGGCTGCACCCGAAAAGCCTATGATCGTTGAGCCCCTTAAAGTGGCTAGAATGCCACTGGATGTTTTCGAAGAGATGATCCGGCAAGCCGTGGCACAAGCCCTCATTATTGCCGAAGGTTATAGGGCTGAGCAAGATGCACTCAGGGAAATTCGGGCAGAAAAAGAGATGGAAAATCAGAGCATGAGGGAAGAGGATGAGTTTGCAAGAAAGAGAGACTTGGAAGAGAAAAGGGAAGCTGAGAAAAAGAAGGAAGAAGAAAAACAAGAGGCCGAGAGGGCCATACAAGCTGAGAAAGAGAGAAAAAAAGATGAAGAACTCAGGAGCGTAGCTGCTGAACTTCACCTCCTTGAGCAAGAAAAAGAAAGAAGAGAAAATTTGAAAGAAGAAGAAACACGGAGAAAAGAAGCTAAGGACTTCCTTGCAGCTTTTGAGCCACTACAGAAGACTCAAAGTGAGGTGGAACAGCTGCAAGAAGTGGAGGAAGAGGCCCTTGAAGGGCCAAGTGAAGAAAAATCAGAAAAAGAAAAAGATGAAGAAATCACAGGCCAGAATGCGACCGCATTTGGGCCGCATTCTGAAGAAGGCCAAGAAAAGGCCACTGAAGGAGAGCAAGCTGATGAGGCCTTGGATCCTTTGTTTGAATATGATGTTAGAGGACCTCCACCAACTGCTGATAGTACCTCTTCGGGAGAGAAGAAGGATGAAGAGGAAGTTGAAAAAGAGAAGGCCGAGACCTCCAGTGATTCAGAAACTGAGTCAGATTCAGAGATAAAGGAATTGGATGATGACCAAATTCCTATCTCTGCAGCTTTGAGGAAGAAAAGAAAAAGAGAACTGAGAGCTGAAAGGAGGACTAAGAATAAAGATGACCCCATTTTTGCCAAGAGGCCGAGGACAAGGTCCATGGATGCCTCTCCTGCAATTCCTCCTACCTCCACACCTGTCAAACCAAAAGCCAAATCGCCTAAAGCTCAATCACCAAAGAATCCATTTCCTGAAGTCTTCAAGGATGTTAATTTCCAGGAGAAGGTGGAAATTATGAGAAAAAGAGACTTCCTGAACGAGAAGGGATTCTCCAACAAAGCAGGGACTTTGCCAGACTTTGTGACTAAAGGGAATGATGCCATCAAGAACCCTTGCCATCAAGAACCGGATCAAGGCACCCTTGCATCCAAGAGGGAATGA

Protein sequence

MKNTPKSSSSRKITRSQSNQPAQSSEPSARRQEEQLEPTLHETRGTRPMGFSLAVVDPRTTVQTPSSSTMSTTLRENPSSSRLRRSTRTDSLHKTQNPAGQQLRKRSREWDKTFVIYSARKKDSKKAAPEKPMIVEPLKVARMPLDVFEEMIRQAVAQALIIAEGYRAEQDALREIRAEKEMENQSMREEDEFARKRDLEEKREAEKKKEEEKQEAERAIQAEKERKKDEELRSVAAELHLLEQEKERRENLKEEETRRKEAKDFLAAFEPLQKTQSEVEQLQEVEEEALEGPSEEKSEKEKDEEITGQNATAFGPHSEEGQEKATEGEQADEALDPLFEYDVRGPPPTADSTSSGEKKDEEEVEKEKAETSSDSETESDSEIKELDDDQIPISAALRKKRKRELRAERRTKNKDDPIFAKRPRTRSMDASPAIPPTSTPVKPKAKSPKAQSPKNPFPEVFKDVNFQEKVEIMRKRDFLNEKGFSNKAGTLPDFVTKGNDAIKNPCHQEPDQGTLASKRE

Homology

The following BLAST results are available for this feature:

BLAST of Spg032559 vs.


Match Name	E-value	Identity	Description

BLAST of Spg032559 vs.


Match Name	E-value	Identity	Description

BLAST of Spg032559 vs.


Match Name	E-value	Identity	Description

BLAST of Spg032559 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 195..262
None	No IPR available	COILS	Coil	Coil	coord: 272..292
None	No IPR available	COILS	Coil	Coil	coord: 170..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 408..423
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 354..379
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..460
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 499..520
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 293..307
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..267

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg032559.1	Spg032559.1	mRNA