Spg032539 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCATCTTCCTTTGGGTGCCCATTAACTATTTTAGGCTTTCCTCTTGGAGGAAACCACCACATAAGACACCTTTGGGATCCTCTCATCGAAAAAATAAAAGCTTGGTTGGATGGATGGAGGAGCCTCCTTTCAAAAGGGGATAGGGTCACTCTTGCTCAATTAGTTATGAATAGCTTACCTATCTACTGCATCTCTCTCCTCTGGGCCTTGAAGAATTTGACTAAGTTCATGGAAAAGATTATCATAGACTTCATTTGGAATGGTGGTGTTTACAAGCCTATTTGCAACTTGGTGAAATGGGAGTGGATAACTCTGCCTACATCGCTTGGGAGGCTGTGAGTAGGTTCACTCAATCACCAAAACACTTCTATGCTCACGAAGTGGATCTTGAGATTCACTCAAGAAGAAAATCCCCTTTGGAAGATGGTTATATCTAGTATTTATGATGTGAATTCTCATGGGTGGATGATGGTTATATCTAGTATTTATGATGTGAATTCTCATGGGTGGATGACTGATGAGATTAGGAAGAAAAAAGGGATGGATCCTTTGGAAGATGGTTATAACTAG ATGGCATCTTCCTTTGGGTGCCCATTAACTATTTTAGGCTTTCCTCTTGGAGGAAACCACCACATAAGACACCTTTGGGATCCTCTCATCGAAAAAATAAAAGCTTGGTTGGATGGATGGAGGAGCCTCCTTTCAAAAGGGGATAGGGTCACTCTTGCTCAATTAGTTATGAATAGCTTACCTATCTACTGCATCTCTCTCCTCTGGGCCTTGAAGAATTTGACTAAGTTCATGGAAAAGATTATCATAGACTTCATTTGGAATGGTGGTGTTTACAAGCCTATTTGCAACTTGGTGAAATGGGAGTGGATAACTCTGCCTACATCGCTTGGGAGGCTTATTTATGATGTGAATTCTCATGGGTGGATGACTGATGAGATTAGGAAGAAAAAAGGGATGGATCCTTTGGAAGATGGTTATAACTAG ATGGCATCTTCCTTTGGGTGCCCATTAACTATTTTAGGCTTTCCTCTTGGAGGAAACCACCACATAAGACACCTTTGGGATCCTCTCATCGAAAAAATAAAAGCTTGGTTGGATGGATGGAGGAGCCTCCTTTCAAAAGGGGATAGGGTCACTCTTGCTCAATTAGTTATGAATAGCTTACCTATCTACTGCATCTCTCTCCTCTGGGCCTTGAAGAATTTGACTAAGTTCATGGAAAAGATTATCATAGACTTCATTTGGAATGGTGGTGTTTACAAGCCTATTTGCAACTTGGTGAAATGGGAGTGGATAACTCTGCCTACATCGCTTGGGAGGCTTATTTATGATGTGAATTCTCATGGGTGGATGACTGATGAGATTAGGAAGAAAAAAGGGATGGATCCTTTGGAAGATGGTTATAACTAG MASSFGCPLTILGFPLGGNHHIRHLWDPLIEKIKAWLDGWRSLLSKGDRVTLAQLVMNSLPIYCISLLWALKNLTKFMEKIIIDFIWNGGVYKPICNLVKWEWITLPTSLGRLIYDVNSHGWMTDEIRKKKGMDPLEDGYN Homology
BLAST of Spg032539 vs. NCBI nr
Match: RVW84593.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]) HSP 1 Score: 92.4 bits (228), Expect = 3.3e-15 Identity = 52/142 (36.62%), Postives = 76/142 (53.52%), Query Frame = 0
BLAST of Spg032539 vs. NCBI nr
Match: XP_028112693.1 (uncharacterized protein LOC114310799 [Camellia sinensis]) HSP 1 Score: 92.0 bits (227), Expect = 4.3e-15 Identity = 46/103 (44.66%), Postives = 63/103 (61.17%), Query Frame = 0
BLAST of Spg032539 vs. NCBI nr
Match: XP_026438270.1 (uncharacterized protein LOC113336811 [Papaver somniferum]) HSP 1 Score: 90.9 bits (224), Expect = 9.5e-15 Identity = 48/119 (40.34%), Postives = 72/119 (60.50%), Query Frame = 0
BLAST of Spg032539 vs. NCBI nr
Match: RVW36182.1 (putative ribonuclease H protein [Vitis vinifera]) HSP 1 Score: 90.5 bits (223), Expect = 1.2e-14 Identity = 45/127 (35.43%), Postives = 72/127 (56.69%), Query Frame = 0
BLAST of Spg032539 vs. NCBI nr
Match: RVX11981.1 (putative ribonuclease H protein [Vitis vinifera]) HSP 1 Score: 90.1 bits (222), Expect = 1.6e-14 Identity = 45/119 (37.82%), Postives = 69/119 (57.98%), Query Frame = 0
BLAST of Spg032539 vs. ExPASy TrEMBL
Match: A0A803QQM3 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 8.4e-17 Identity = 50/118 (42.37%), Postives = 71/118 (60.17%), Query Frame = 0
BLAST of Spg032539 vs. ExPASy TrEMBL
Match: A0A803PZR9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 5.5e-16 Identity = 45/112 (40.18%), Postives = 67/112 (59.82%), Query Frame = 0
BLAST of Spg032539 vs. ExPASy TrEMBL
Match: A0A803P8A0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 5.5e-16 Identity = 48/118 (40.68%), Postives = 71/118 (60.17%), Query Frame = 0
BLAST of Spg032539 vs. ExPASy TrEMBL
Match: A0A803PSR8 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 9.3e-16 Identity = 47/107 (43.93%), Postives = 66/107 (61.68%), Query Frame = 0
BLAST of Spg032539 vs. ExPASy TrEMBL
Match: A0A803P465 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 1.2e-15 Identity = 48/119 (40.34%), Postives = 71/119 (59.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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